BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0134.11
(238 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28790 unknown protein 33 0.10
At2g28440 En/Spm-like transposon protein 33 0.13
At2g18180 putative phosphatidylinositol/phophatidylcholine trans... 33 0.13
At1g35230 arabinogalactan-protein AGP5 33 0.13
At3g28780 histone-H4-like protein 33 0.17
At1g34355 orkhead-associated domain-containing protein / FHA 33 0.17
At1g16190 hypothetical protein, 3' partial 31 0.51
At3g49600 putative protein 31 0.66
At3g28830 hypothetical protein 31 0.66
At5g58320 contains similarity to unknown protein (gb|AAB63087.1) 30 0.87
At3g44790 hypothetical protein 30 0.87
At1g13330 unknown protein 30 0.87
At3g19020 hypothetical protein 30 1.1
At1g49340 hypothetical protein 30 1.1
At1g27950 GPI-anchored protein (LTPL) 30 1.1
At4g36490 hypothetical protein 30 1.5
At1g49270 hypothetical protein 30 1.5
At5g61040 putative protein 29 1.9
At3g19070 hypothetical protein 29 1.9
At2g07240 hypothetical protein 29 1.9
>At3g28790 unknown protein
Length = 608
Score = 33.5 bits (75), Expect = 0.10
Identities = 40/174 (22%), Positives = 65/174 (36%), Gaps = 18/174 (10%)
Query: 10 SSPCPEGVSAGLKPSENSLQTTPSPN------LTEAGPAGASLARPASSQDEGANSQGSP 63
S+P P + +TP+P+ +E G AS+ + ++S+ E ++
Sbjct: 289 STPTPSTPTPSTPTPSTPTPSTPAPSTPAAGKTSEKGSESASMKKESNSKSESESAASGS 348
Query: 64 VFCSPSAETNHAISGD---QAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQ 120
V S + ETN SGD ++S PS S K S + A+
Sbjct: 349 V--SKTKETNKGSSGDTYKDTTGTSSGSPSGSPSGSPTPSTSTDGKASSKGSASASA--- 403
Query: 121 GQENAFLQSELGATNEALADVRSQLEAENQALADMESKTKTSQARLVADVAAEV 174
A + GA+ A SQ + N + S T TS + ++EV
Sbjct: 404 ---GASASASAGASASAEESAASQKKESNSKSSSSSSST-TSVKEVETQTSSEV 453
>At2g28440 En/Spm-like transposon protein
Length = 268
Score = 33.1 bits (74), Expect = 0.13
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 13/91 (14%)
Query: 6 GGAESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDE-------GAN 58
G E SP P VS G +PS T SP + P S P+SS +E +
Sbjct: 22 GAQEESPSPAAVSPGREPS------TDSPLSPSSSPEEDSPLSPSSSPEEDSPLPPSSSP 75
Query: 59 SQGSPVFCSPSAETNHAISGDQAGPSASQQP 89
+ SP+ S S E + ++ + S QP
Sbjct: 76 EEDSPLAPSSSPEVDSPLAPSSSPEVDSPQP 106
>At2g18180 putative phosphatidylinositol/phophatidylcholine transfer
protein
Length = 558
Score = 33.1 bits (74), Expect = 0.13
Identities = 31/107 (28%), Positives = 49/107 (44%), Gaps = 13/107 (12%)
Query: 62 SPVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQG 121
SPV+C ++ ++ G + + +A M A LE K +++A AT +
Sbjct: 437 SPVYCDENSMNKSSMHGKKMATTTISGEDFMAVMKRMAELE--QKVTNLSAQPATMPPEK 494
Query: 122 QE--NA------FLQSELGATNEALADVRSQLEAENQALADMESKTK 160
+E NA FL+ EL AT +AL D L + +A +E K K
Sbjct: 495 EEMLNAAISRADFLEQELAATKKALDD---SLTRQEDLVAYVERKKK 538
>At1g35230 arabinogalactan-protein AGP5
Length = 133
Score = 33.1 bits (74), Expect = 0.13
Identities = 18/64 (28%), Positives = 27/64 (42%)
Query: 23 PSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSPSAETNHAISGDQAG 82
PS++ T P+P+ + P A P SQ + P SPS + +AG
Sbjct: 39 PSQSPRATAPAPSPSANPPPSAPTTAPPVSQPPTESPPAPPTSTSPSGAPGTNVPSGEAG 98
Query: 83 PSAS 86
P+ S
Sbjct: 99 PAQS 102
>At3g28780 histone-H4-like protein
Length = 614
Score = 32.7 bits (73), Expect = 0.17
Identities = 35/132 (26%), Positives = 52/132 (38%), Gaps = 12/132 (9%)
Query: 6 GGAESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVF 65
GGA S PE + E++ S + +G A +S + + + GA S GS
Sbjct: 350 GGATSGGSPETGGSAETGGESASGGAASGGESASGGAASSGSVESGGESTGATSGGSAET 409
Query: 66 CSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENA 125
SA A G+ A A+ S S E ES ++G A+ G E+A
Sbjct: 410 SDESASGGAASGGESASGGAA----------SGGSAETGG--ESTSSGVASGGSTGSESA 457
Query: 126 FLQSELGATNEA 137
+ G + EA
Sbjct: 458 SAGAASGGSTEA 469
Score = 31.6 bits (70), Expect = 0.39
Identities = 38/132 (28%), Positives = 49/132 (36%), Gaps = 4/132 (3%)
Query: 7 GAESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARP--ASSQDEGANSQGSPV 64
G ESS + SAG S T S + A GA+ A A+S D G + G
Sbjct: 202 GGESSMGGDSSSAGAAGESGSAATADSGDAAGADSGGAAGADSGGAASADSGGAAAGETA 261
Query: 65 FCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQEN 124
+A S + G SAS + A S AS K ES A G E+
Sbjct: 262 SGGAAAADTSGGSAETGGESASGGAASGAGAASGAS--AKTGGESGEAASGGSAETGGES 319
Query: 125 AFLQSELGATNE 136
A + G + E
Sbjct: 320 ASAGAASGGSAE 331
>At1g34355 orkhead-associated domain-containing protein / FHA
Length = 1477
Score = 32.7 bits (73), Expect = 0.17
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 30/154 (19%)
Query: 60 QGSPVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNAS-LEVKAKTESVNAGKATCI 118
Q SP FC+ S + N PS Q F S S ++ A+ ES++ +
Sbjct: 514 QASPEFCTSSVKANAENPSSGCSPSTEQIDG--CFETSGCSAFDLAAEVESLSLHQEV-- 569
Query: 119 LQGQENAFLQSE-LGATNEAL--ADVRSQLEAENQALADMESKTKTSQARLVADVAAEVV 175
+E F+ E +G ++E L AD+RS E ++ +R V +V+AE V
Sbjct: 570 --SEETEFVTKEVMGVSSEPLGKADIRSH-----------EENGESEDSRQVIEVSAEPV 616
Query: 176 EERGRGFFLAKAQVQHLYQGINLDGMGAFKKITP 209
AKA +Q + +G +++P
Sbjct: 617 ---------AKADIQSHEENGETEGSRQVIEVSP 641
>At1g16190 hypothetical protein, 3' partial
Length = 236
Score = 31.2 bits (69), Expect = 0.51
Identities = 39/153 (25%), Positives = 63/153 (40%), Gaps = 20/153 (13%)
Query: 77 SGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENAFLQSELGATNE 136
+ AGPS++Q S +S+ +L + T+S+ A A+ QE QS+
Sbjct: 56 TASSAGPSSTQPTSTTTSTISSTTLAAPSTTQSI-AVPASNSTPVQEQPTAQSDTYGQAA 114
Query: 137 ALADVRSQLEAENQALADMESKTKTSQARLVADVAAEVVEERGRGFFLAKAQVQHLYQGI 196
+ S +E Q + +M + + A AA ER V +LY GI
Sbjct: 115 STLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERA---------VDYLYSGI 165
Query: 197 ---------NLDGMGAFKKIT-PHGLVGPDDPP 219
NL G+G+ +++T P GP+ P
Sbjct: 166 PETVTIPATNLSGVGSGRELTAPPPSGGPNSSP 198
>At3g49600 putative protein
Length = 1672
Score = 30.8 bits (68), Expect = 0.66
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 7/169 (4%)
Query: 3 KHVGGAESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGS 62
+HV PC E S+ P S T S N+T+ +G+S R A + ++S
Sbjct: 983 EHVSELGKRPCNEASSS--TPQSESNGTASSGNITDGIQSGSSDCRSAIKSEVFSSSDAY 1040
Query: 63 PVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQ-G 121
+ S + G + P + + L L K +E +N A +
Sbjct: 1041 MLMYSLRCDKQENQEGQKENPIDITKGEV--KQLKGGYLP-KHLSEWINNMNAVFLESCK 1097
Query: 122 QENAFLQSELGATNEALADVRSQL-EAENQALADMESKTKTSQARLVAD 169
Q N + EL A E +VR+ L EA Q+L + T RL AD
Sbjct: 1098 QYNLRKEKELNALTERRQEVRTILSEAAVQSLEEQYFWISTDWLRLWAD 1146
>At3g28830 hypothetical protein
Length = 536
Score = 30.8 bits (68), Expect = 0.66
Identities = 37/155 (23%), Positives = 66/155 (41%), Gaps = 5/155 (3%)
Query: 6 GGAESSPCPE--GVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGS- 62
GG+ ++ E G SA K E+S + + T P+G+ A P+ S ++S+GS
Sbjct: 242 GGSAATKSKESSGGSAATKSKESS-GGSATTGKTSGSPSGSPKASPSGSVSGKSSSKGSA 300
Query: 63 PVFCSPSAETNHAISGD-QAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQG 121
S SA+ + + G A SAS Q M + S E K ++ + +
Sbjct: 301 SAQGSASAQGSASAQGSASAQGSASAQRRESGAMAMSKSRETKTSSQRQSKSSSESSSSS 360
Query: 122 QENAFLQSELGATNEALADVRSQLEAENQALADME 156
++ T++ + QLE + A A+++
Sbjct: 361 TTTTTVKQVESETSKEVMSFIMQLEKKYAAKAELK 395
>At5g58320 contains similarity to unknown protein (gb|AAB63087.1)
Length = 589
Score = 30.4 bits (67), Expect = 0.87
Identities = 28/111 (25%), Positives = 50/111 (44%), Gaps = 10/111 (9%)
Query: 70 AETNHAISGDQAGPSASQQPSLIAF--MLSNASLEVKAKTESVNAGKATCILQGQENAFL 127
AE + I + S S L + ML +A E A +A K + + L
Sbjct: 346 AEKQNGIMRKEVEKSKSDDAKLKSLQDMLESAQKEAAAWKSKASADKREVVKLLDRISML 405
Query: 128 QSELGATNEALADVRSQLEAENQALADMESKTKTSQARLVADVAAEVVEER 178
+S L + + D+++ AL+D E K +A++ AD+ A+++EE+
Sbjct: 406 KSSLAGRDHEIRDLKT-------ALSDAEEKIFPEKAQVKADI-AKLLEEK 448
>At3g44790 hypothetical protein
Length = 389
Score = 30.4 bits (67), Expect = 0.87
Identities = 22/71 (30%), Positives = 35/71 (48%), Gaps = 7/71 (9%)
Query: 102 EVKAKTESVNAGKATCILQGQENAFLQSELGATNEALADVRSQLEAENQALADMESKTKT 161
EVK K GK+ QE L+ EL + +D+ +QLE E Q +D+E+ +
Sbjct: 317 EVKEKKMEEQIGKSRM----QE---LEEELKIFKQKCSDIEAQLEKEKQKCSDIEALLEK 369
Query: 162 SQARLVADVAA 172
+A+ +A A
Sbjct: 370 EKAKSLAAARA 380
>At1g13330 unknown protein
Length = 226
Score = 30.4 bits (67), Expect = 0.87
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 90 SLIAFMLSNASLEVKAKTESVNAGKATCILQGQENAFL----------QSELGATNEALA 139
+L F L +++ KA +AGK T G++ ++ EL E A
Sbjct: 31 ALQKFNLKKTAVQ-KALDSLADAGKITFKEYGKQKIYIARQDQFEIPNSEELAQMKEDNA 89
Query: 140 DVRSQLEAENQALADMESKTKTSQARLVADVAAE 173
++ QL+ + + ++D+ES+ K+ Q+ L + E
Sbjct: 90 KLQEQLQEKKKTISDVESEIKSLQSNLTLEEIQE 123
Score = 27.3 bits (59), Expect = 7.3
Identities = 17/85 (20%), Positives = 40/85 (47%)
Query: 122 QENAFLQSELGATNEALADVRSQLEAENQALADMESKTKTSQARLVADVAAEVVEERGRG 181
++NA LQ +L + ++DV S++++ L E + K ++ R E + + G
Sbjct: 86 EDNAKLQEQLQEKKKTISDVESEIKSLQSNLTLEEIQEKDAKLRKEVKEMEEKLVKLREG 145
Query: 182 FFLAKAQVQHLYQGINLDGMGAFKK 206
L + + + + + D + ++K
Sbjct: 146 ITLVRPEDKKAVEDMYADKINQWRK 170
>At3g19020 hypothetical protein
Length = 951
Score = 30.0 bits (66), Expect = 1.1
Identities = 24/93 (25%), Positives = 44/93 (46%), Gaps = 5/93 (5%)
Query: 11 SPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDE---GANSQGSPVFCS 67
SP P+ V+ L P+ + + P+P+ +E+G + P ++ ++S SPVF S
Sbjct: 812 SPPPKPVTP-LPPATSPMANAPTPSSSESGEISTPVQAPTPDSEDIEAPSDSNHSPVFKS 870
Query: 68 PSAETNHAISGDQAGPSASQQPSLIAFMLSNAS 100
A + + + P S +P + A S A+
Sbjct: 871 SPAPSPDS-EPEVEAPVPSSEPEVEAPKQSEAT 902
>At1g49340 hypothetical protein
Length = 1957
Score = 30.0 bits (66), Expect = 1.1
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 35 NLTEAGPAGASLARPASSQDEGANSQGSPVFCS--PSAETNHAISGDQAGPSAS--QQPS 90
N A P A+S+ + ++SQGSP+ + PS +T A GD+ S S
Sbjct: 181 NRAPASPKEQRQQNSANSETDTSSSQGSPISTNRYPSGKTEMASPGDEVASHGSNLSSKS 240
Query: 91 LIAFMLSNASLEVKAKTESVNAG 113
+ +++ S+ K+ + ++ G
Sbjct: 241 SSSVVMNGGSIVWKSGVDQLSFG 263
>At1g27950 GPI-anchored protein (LTPL)
Length = 193
Score = 30.0 bits (66), Expect = 1.1
Identities = 23/70 (32%), Positives = 34/70 (47%), Gaps = 12/70 (17%)
Query: 8 AESSPCPEGVSAGLKPSE-NSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFC 66
A + CP+ + G+ PS ++ T + T PAG S A PA+S D+G
Sbjct: 111 ASITNCPKLL--GISPSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGG--------- 159
Query: 67 SPSAETNHAI 76
S SA+ HA+
Sbjct: 160 SASAKDGHAV 169
>At4g36490 hypothetical protein
Length = 543
Score = 29.6 bits (65), Expect = 1.5
Identities = 28/105 (26%), Positives = 42/105 (39%), Gaps = 9/105 (8%)
Query: 62 SPVFCSPSAETNHAISGDQAGPSASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQG 121
SPV+C ++ A+ ++ A +A M A LE K S +
Sbjct: 434 SPVYCDDASMNKSAMQSEKMTVPAISGEDFMAIMKRMAELEQKVTVLSAQPTVMPPDKEE 493
Query: 122 QENA------FLQSELGATNEALADVRSQLEAENQALADMESKTK 160
NA L+ EL AT +AL D L + + +A +E K K
Sbjct: 494 MLNAAISRSNVLEQELAATKKALDD---SLGRQEELVAYIEKKKK 535
>At1g49270 hypothetical protein
Length = 699
Score = 29.6 bits (65), Expect = 1.5
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 9 ESSPCPEGVSAGLKPSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSP 63
E++ P S + P Q +P P L E G+S + P D + SQ P
Sbjct: 40 ETTSPPPPSSPDIAPPPQQQQESPPPPLPENSSDGSSSSSPPPPSDSSSQSQSPP 94
>At5g61040 putative protein
Length = 590
Score = 29.3 bits (64), Expect = 1.9
Identities = 17/87 (19%), Positives = 39/87 (44%)
Query: 104 KAKTESVNAGKATCILQGQENAFLQSELGATNEALADVRSQLEAENQALADMESKTKTSQ 163
K+K+ G AT +LQ + + S A+ ++ V+ +L+ + D+E + +
Sbjct: 224 KSKSRKHGLGDATMLLQIGISIGIMSSFMASQAEVSKVKQELKQTENLVHDLEDELEMKD 283
Query: 164 ARLVADVAAEVVEERGRGFFLAKAQVQ 190
+V ++ E E +A+++
Sbjct: 284 TLIVKEIDIEKAAESSESISNIEAELE 310
>At3g19070 hypothetical protein
Length = 346
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/95 (27%), Positives = 42/95 (43%), Gaps = 10/95 (10%)
Query: 23 PSENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSPSAETNHAISG---- 78
PS ++L T+ SP+L + +SL PAS ++ +S PS+ + A S
Sbjct: 116 PSSSTLATSSSPSLQPPSMSSSSLQPPASLREFFTSSVS--YSHQPSSSSTLATSSFFPS 173
Query: 79 ----DQAGPSASQQPSLIAFMLSNASLEVKAKTES 109
P +S +PSL F S+ S ++ S
Sbjct: 174 SMPYSVRPPDSSDRPSLREFFPSSPSSSIQPPESS 208
>At2g07240 hypothetical protein
Length = 928
Score = 29.3 bits (64), Expect = 1.9
Identities = 29/146 (19%), Positives = 52/146 (34%), Gaps = 1/146 (0%)
Query: 25 ENSLQTTPSPNLTEAGPAGASLARPASSQDEGANSQGSPVFCSPSAETNHAISGDQAGPS 84
+N LQ E S A+ +E + P S +T+ + Q +
Sbjct: 332 DNGLQADKETGGEEQNSNPVSSPESANEYEESDFNPIPPPRQPSSMQTDFTLPSFQGDQA 391
Query: 85 ASQQPSLIAFMLSNASLEVKAKTESVNAGKATCILQGQENAFLQSELGATNEALADVRSQ 144
S +++F ++ ++ + N K + G+E +Q E +A D+
Sbjct: 392 ISAVDDVVSFY-NSVNVPTDPSGGASNTNKTNKVQSGEEEVGVQPEKNGNQQADVDMVDD 450
Query: 145 LEAENQALADMESKTKTSQARLVADV 170
L A AD+E + A DV
Sbjct: 451 LNAGRAHQADVEMVDDINAAMAEQDV 476
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.307 0.124 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,924,684
Number of Sequences: 26719
Number of extensions: 193640
Number of successful extensions: 624
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 593
Number of HSP's gapped (non-prelim): 76
length of query: 238
length of database: 11,318,596
effective HSP length: 96
effective length of query: 142
effective length of database: 8,753,572
effective search space: 1243007224
effective search space used: 1243007224
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0134.11