BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0133.3
(700 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45700 unknown protein 655 0.0
At3g26680 unknown protein 228 7e-60
At1g66730 hypothetical protein 181 9e-46
At1g27410 unknown protein (At1g27420) 97 3e-20
At1g19025 unknown protein 65 1e-10
At3g48800 hypothetical protein 54 2e-07
At5g23680 unknown protein 50 4e-06
At3g07170 unknown protein 48 2e-05
At1g70180 unknown protein 47 4e-05
At5g48680 putative protein 46 6e-05
At3g11890 unknown protein 39 0.013
At1g61010 putative cleavage and polyadenylation specificity factor 36 0.064
At2g03440 unknown protein 35 0.14
At2g27660 hypothetical protein 33 0.71
At2g46020 putative SNF2 subfamily transcriptional activator 32 1.6
At4g26445 predicted protein 31 2.1
At3g04980 hypothetical protein, contains DnaJ motif: prokaryotic... 31 2.1
At4g13750 hypothetical protein 30 3.5
At1g15940 T24D18.4 30 3.5
At5g28210 mRNA capping enzyme - like 30 4.6
>At2g45700 unknown protein
Length = 723
Score = 655 bits (1689), Expect = 0.0
Identities = 372/731 (50%), Positives = 464/731 (62%), Gaps = 71/731 (9%)
Query: 22 DDDEFEIPLTQTATIHRPLKKHKLETTAFGGS----------GKENVPPNASSSTIHDDG 71
DDD+F+IP + +I +PL + GKENV P S
Sbjct: 8 DDDDFQIPPSSQLSIRKPLHPTNANNISHRPPNKKPRLCRYPGKENVTPPPSPDPDLFCS 67
Query: 72 YEIENCSLDFIPSTIDSVGTALTDSSSSSSSASVSAFVISSPVKVKMKGTAYFGNSIESK 131
+C LD IPS++D +L D + SS +K+ Y NS+E++
Sbjct: 68 SSTPHCILDCIPSSVDC---SLGDFNGPISSLGEEDKEDKDDC-IKVNREGYLCNSMEAR 123
Query: 132 LVVSRA-----NAINN-----AEAGSEL----NLSDELDG-----------SVRCPLCEV 166
L+ SR + I+ E+ SEL NL E +G S++CPLC +
Sbjct: 124 LLKSRICLGFDSGIHEDDEGFVESNSELDVLINLCSESEGRSGEFSLGKDDSIQCPLCSM 183
Query: 167 DISNLTEEQRHLHTNDCLDRGDDVAVRDDNVDA-------------------QFAPKVSR 207
DIS+L+EEQR +H+N CLD+ + D++ Q +S
Sbjct: 184 DISSLSEEQRQVHSNTCLDKSYNQPSEQDSLRKCENLSSLIKESIDDPVQLPQLVTDLSP 243
Query: 208 VVDWLRDLGLGKYEDVFVREEVDWDTLQWLTEEDLLSMGVTALGPRKKIVHALCEFRKGI 267
V+ WLR LGL KYEDVF+REE+DWDTLQ LTEEDLLS+G+T+LGPRKKIV+AL R
Sbjct: 244 VLKWLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSGVRDPF 303
Query: 268 AASNEKPEDALAEPRRNRNQNVKMQPHRPERKVDGTSKPAANKKITEYFPGFATNGKKVS 327
A+S E + + + + + RK KP ANK ITE+FPG AT G K+
Sbjct: 304 ASSAEVQAQSHCT---SGHVTERQRDKSTTRKASEPKKPTANKLITEFFPGQATEGTKIR 360
Query: 328 TAPEEQQEMKSSGSVSGRNHKGKNSSTNRKLRDVPKWCSIEGTPFRVDAFKYLRGDCSHW 387
TAP+ E S S S R + + N K + +P W I GTPFRVDAFKYL DC HW
Sbjct: 361 TAPKPVAEKSPSDSSSRR--AVRRNGNNGKSKVIPHWNCIPGTPFRVDAFKYLTRDCCHW 418
Query: 388 FLTHFHLDRTRLLDLNIFDTDLRQMGYLIKFECFARLVNMNIGIPYDKLHILPLNQKVEI 447
FLTHFHLD + L T G + A+LVNM IGIP+++L +L L QKV I
Sbjct: 419 FLTHFHLDHYQGL------TKSFSHGKIYCSLVTAKLVNMKIGIPWERLQVLDLGQKVNI 472
Query: 448 AGIDVTCLDANHCPGSIIILFQPPNGKAVLHTGDFRFSDELAINPVLRMCPVHTLILDTT 507
+GIDVTC DANHCPGSI+ILF+P NGKAVLHTGDFR+S+E++ L + +LILDTT
Sbjct: 473 SGIDVTCFDANHCPGSIMILFEPANGKAVLHTGDFRYSEEMS--NWLIGSHISSLILDTT 530
Query: 508 YCNPQYDFPKQEAVIQFVIDAIQAEAFNPGTLFLIGSYTIGKERLFLEVARSLRRKVYVN 567
YCNPQYDFPKQEAVIQFV++AIQAEAFNP TLFLIGSYTIGKERLFLEVAR LR K+Y+N
Sbjct: 531 YCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVARVLREKIYIN 590
Query: 568 AAKLRLLKCLEFEEEDMQWFTLNEHESNIHVAPMWTLASLKRLKHVSSQYASRFSLIVAF 627
AKL+LL+CL F ++D+QWFT+ E ES+IHV P+WTLAS KRLKHV+++Y +R+SLIVAF
Sbjct: 591 PAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLASFKRLKHVANRYTNRYSLIVAF 650
Query: 628 SPTGWTFGKGKKKSPGRRWQNGTIIRYEVPYSEHCSFTELKDFVKHISPANIIPSVNNDG 687
SPTGWT GK KKKSPGRR Q GTIIRYEVPYSEH SFTELK+FV+ +SP IIPSVNNDG
Sbjct: 651 SPTGWTSGKTKKKSPGRRLQQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSVNNDG 710
Query: 688 PESANAMISLM 698
P+SA AM+SL+
Sbjct: 711 PDSAAAMVSLL 721
>At3g26680 unknown protein
Length = 484
Score = 228 bits (582), Expect = 7e-60
Identities = 142/403 (35%), Positives = 224/403 (55%), Gaps = 24/403 (5%)
Query: 304 SKPAANKKI--TEYFPGFATNGKKVSTAPEEQQEMKSSGSVSGRNHKGKNSSTNRKLRDV 361
+ P KK+ T+ F + T+P K++ ++ R +S +N R
Sbjct: 88 NSPDTTKKMKQTDLFQSWGLQKPSPFTSPASNSAKKTTSALGKRRRD--SSFSNDSPRPC 145
Query: 362 PKWCSIEGTPFRVDAFKY--LRGDCSHWFLTHFHLDRTRLLDLNIFDTDLRQMGYLIKFE 419
P + + GTPF VDAF+Y ++G CS +FLTHFH D L T G +
Sbjct: 146 PFYKKLPGTPFTVDAFRYGCVQG-CSAYFLTHFHADHYIGL------TKAWSHGPIYCSS 198
Query: 420 CFARLVNMNIGIPYDKLHILPLNQKVEIAGIDVTCLDANHCPGSIIILFQPPNGKAVLHT 479
+RL+ +++ + +H L L+ + I GI VT ++ANHCPG+ +I F+ +G LHT
Sbjct: 199 LTSRLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHT 258
Query: 480 GDFRFSDELAINPVLRMCPVHTLILDTTYCNPQYDFPKQEAVIQFVI----DAIQAEAFN 535
GDFR S ++ +P+L VH L LDTTYCNP+Y FP +E V+ +V+ D ++ +
Sbjct: 259 GDFRASKQMQTHPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQ--- 315
Query: 536 PGTLFLIGSYTIGKERLFLEVARSLRRKVYVNAAKLRLLKCLEFEEEDMQWFTLNEHESN 595
P TL ++GSY+IGKE ++L +A++L K++ NA++ R+L+ +++ T + +
Sbjct: 316 PKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLST-DGKATC 374
Query: 596 IHVAPMWTLASLKRLKHVSSQYASRFSLIVAFSPTGWTFGK--GKKKSPGRRWQNGTIIR 653
+HV PM +L ++RL Y ++ ++AF PTGWT+ + G+ + G I
Sbjct: 375 LHVLPMSSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITI 433
Query: 654 YEVPYSEHCSFTELKDFVKHISPANIIPSVNNDGPESANAMIS 696
Y VPYSEH SFTEL++FV+ + P IIP+VNN + M S
Sbjct: 434 YGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQS 476
>At1g66730 hypothetical protein
Length = 1417
Score = 181 bits (460), Expect = 9e-46
Identities = 116/338 (34%), Positives = 175/338 (51%), Gaps = 23/338 (6%)
Query: 361 VPKWCSIEGTPFRVDAFKYLRGDCS-HWFLTHFHLDRTRLLDLNIFDTDLRQMGYLIKFE 419
+P I T F VD F+ S +FL+HFH D L + G +
Sbjct: 54 IPNSKRIPNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSW------SKGIIYCSH 107
Query: 420 CFARLVNMNIGIPYDKLHILPLNQKVEIAGIDVTCLDANHCPGSIIILF----QPPNGKA 475
ARLV + +P + LP+NQ V+I G +V ++ANHCPG++ LF + +
Sbjct: 108 KTARLVAEILQVPSQFVFALPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEK 167
Query: 476 VLHTGDFRFSDELAINPVLR-MCPVHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAF 534
+HTGDFRF DE+ +P L + LDTTYCNP++ FP QE + +V+ I +
Sbjct: 168 YVHTGDFRFCDEMRFDPFLNGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVID-KIS 226
Query: 535 NPGTLFLIGSYTIGKERLFLEVARSLRRKVYVNAAKLRLLKCLEFEEEDMQWFTLNEHES 594
LFL+ +Y +GKE++ +E+AR +RK+ V+A K+ +L L EE M FT +E+ES
Sbjct: 227 EEKVLFLVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGM--FTEDENES 284
Query: 595 NIHV------APMWTLASLKRLKHVSSQYASRFSLIVAFSPTGWTFGKGKKKSPGRRWQN 648
++HV W +K + +V F PTGWT+ + K R +
Sbjct: 285 DVHVVGWNVLGETWPYFRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDS 344
Query: 649 GTIIRYEVPYSEHCSFTELKDFVKHISPANIIPSVNND 686
I + VPYSEH ++ EL++F+K + P +IP+V D
Sbjct: 345 MEI--HLVPYSEHSNYDELREFIKFLKPKRVIPTVGVD 380
>At1g27410 unknown protein (At1g27420)
Length = 422
Score = 97.1 bits (240), Expect = 3e-20
Identities = 94/340 (27%), Positives = 147/340 (42%), Gaps = 61/340 (17%)
Query: 381 RGDCSHWFLTHFHLDRTRLLDLNIFDTDLRQMGYLIKFECFARLVNMNI-GIPYDKLHIL 439
R +FLTH H D TR L G L A L G L ++
Sbjct: 12 RNGSQAYFLTHIHSDHTRGLSGGW------SQGPLYCSRTTASLFPSRFPGFDLSLLRVV 65
Query: 440 PLNQKVEIA----------GIDVTCLDANHCPGSIIILFQPPNGKAVLHTGDFRF----S 485
PL ++ + + +DA+HCPGSI+ LF+ G L+TGDFR+ S
Sbjct: 66 PLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGDFG-CFLYTGDFRWDSDAS 124
Query: 486 DELAINPVLRM--CPVHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPGTLFLIG 543
DE V + PV L LD TYCNP Y FP + +Q V D I A +P +I
Sbjct: 125 DEARTTLVAAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLVADII---ASHPSHDIIIA 181
Query: 544 SYTIGKERLFLEVARSLRRKVYVNAAKLRLLKCLEFEEEDMQWFTLNEHESNIHVAPMWT 603
++GKE L + V+R L K++V +LR + L F++ FT + + + P ++
Sbjct: 182 VDSLGKEDLLVHVSRILNIKIWVWPERLRTMHLLGFQD----IFTTDTSLTRVRAVPRYS 237
Query: 604 LASLKRLKHVSSQYASRFSLIVAFSPTGWTF----GKGKKKSPG----RRWQNGTI---- 651
S++ L+ +++ + + P+G + KG K G +N T+
Sbjct: 238 F-SIQTLEGLNTMCPT-----IGIMPSGLPWVKRPFKGDDKLSGSFLTASMKNETVSAKK 291
Query: 652 ------------IRYEVPYSEHCSFTELKDFVKHISPANI 679
Y V YS+H + E+ +F+K + P ++
Sbjct: 292 ELEAAAVHKFHDYMYSVHYSDHSCYEEIGEFIKLVKPKSM 331
>At1g19025 unknown protein
Length = 549
Score = 65.1 bits (157), Expect = 1e-10
Identities = 86/348 (24%), Positives = 139/348 (39%), Gaps = 44/348 (12%)
Query: 369 GTPFRVDAF---KYLRGDCSHWFLTHFHLDRT------RLLDLNIFDTDLRQMGYLIKFE 419
G PF VD F + H FLTH H D T ++ I+ T L L +F
Sbjct: 8 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 67
Query: 420 CFARLVNMNIGIPYDKLHILPLNQKVEIAGIDVTCLDANHCPGSIIILFQPPNGKAVLHT 479
+ + I + P + VT DANHCPG+++ LF+ G +LHT
Sbjct: 68 QLDESYFVRVEIGQSVIVDDPDGE------FKVTAFDANHCPGAVMFLFEGSFGN-ILHT 120
Query: 480 GDFRFS-DELAINP---------VLRMCPVHTLILDTTYCNPQYD--FPKQEAVIQFVID 527
GD R + D L P + C + + LD T+ + FP + + I+ +I+
Sbjct: 121 GDCRLTLDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIIN 180
Query: 528 AIQAEAFNPGTLFLIGSYTIGKERLFLEVARSLRRKVYVNAAKLRLLKCLEFEEEDMQWF 587
I P + + +G+E + LEV+R+ K+YV+ K L+C +
Sbjct: 181 CIWNHPDAP--VVYLACDMLGQEDVLLEVSRTFGSKIYVD--KATNLECFRSLMVIVPEI 236
Query: 588 TLNEHESNIHV---APMWTLASLKRLKHVSSQYASRFSLI-------VAFSPTGWTFGKG 637
+ S H+ P + +L S+ S +I V W G
Sbjct: 237 VSEDPSSRFHIFSGFPKLYERTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDDWKSGSI 296
Query: 638 KKKSPGRRWQ--NGTIIRYEVPYSEHCSFTELKDFVKHISPANIIPSV 683
+K+ R + + V YS H S EL+ ++ +SP ++ +V
Sbjct: 297 QKQRKVRFSEAVKDEFGLWHVCYSMHSSRAELESAMQLLSPKWVVSTV 344
>At3g48800 hypothetical protein
Length = 278
Score = 54.3 bits (129), Expect = 2e-07
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 32/231 (13%)
Query: 43 HKLETTAFGGSGKENV-PPNASSSTIHDDGYEIENCSLDFIPSTIDSVGTALTDSSSSSS 101
H A+ G+++ P +S D +L + S +++GT + +
Sbjct: 59 HHAAAAAYDSQGRKSKWTPTTTSGNRKDTSKSSRTRTLTNLSSGYENIGTLDDEREGNVD 118
Query: 102 SASVSAFVISSPVKVKMKGTAYFGNSIESKLVVSRANAINNAEAGSE-LNLSDELDGSVR 160
S V ++ + V G+S +K V R+N ++ G E ++ +EL+G R
Sbjct: 119 SFGVGSWRVKKRV----------GSSAAAKRV--RSNWVSKVGDGDEKISGGEELEGGFR 166
Query: 161 CPLCEVDISNLTEE-----------QRHLHTNDCLDRGDDVAVRDDNVDAQFAPKVSRVV 209
E S + EE +R +N+ + + N+D V
Sbjct: 167 DFSREDSESPIKEESLDRDGGGFYGRRRYESNNSSGNREF----ESNMDGGGKEGVKI-- 220
Query: 210 DWLRDLGLGKYEDVFVREEVDWDTLQWLTEEDLLSMGVTALGPRKKIVHAL 260
WL++LGLG+Y +F EVD + L LT EDL MG+ A+G R+K+ A+
Sbjct: 221 -WLQELGLGRYWPMFEIHEVDEEVLPLLTLEDLKDMGINAVGSRRKMFCAI 270
>At5g23680 unknown protein
Length = 295
Score = 50.1 bits (118), Expect = 4e-06
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 211 WLRDLGLGKYEDVFVREEVDWDTLQWLTEEDLLSMGVTALGPRKKIVHAL 260
WL++LGLG+Y +F EVD L LT EDL MG+ A+G R+K+ A+
Sbjct: 238 WLQELGLGRYWPMFEMHEVDEQVLPLLTLEDLKDMGINAVGSRRKMYCAI 287
>At3g07170 unknown protein
Length = 203
Score = 47.8 bits (112), Expect = 2e-05
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 206 SRVVDWLRDLGLGKYEDVFVREEVDWDTLQWLTEEDLLSMGVTALGPRKKIVHAL 260
S V +L LGL KY F EEVD D L +T++DL +M + +GPRKKI+ AL
Sbjct: 146 SSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDDDLKAM-LIPMGPRKKILLAL 199
>At1g70180 unknown protein
Length = 460
Score = 47.0 bits (110), Expect = 4e-05
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 211 WLRDLGLGKYEDVFVREEVDWDTLQWLTEEDLLSMGVTALGPRKKIVHAL 260
+L +GLGKY F REEVD T++ + E DL + + +GPRKKI+ A+
Sbjct: 406 FLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDL-IIPMGPRKKILQAI 454
>At5g48680 putative protein
Length = 206
Score = 46.2 bits (108), Expect = 6e-05
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 208 VVDWLRDLGLGKYEDVFVREEVDWDTLQWLTEEDLLSMGVTALGPRKKIVHALCEFR 264
V +L LGL KY F EEVD D L+ +T++DL ++ + +GPRKKI+ AL + R
Sbjct: 150 VDSFLESLGLEKYSTAFQVEEVDMDALRHMTDDDLKAL-LIPMGPRKKILLALGDNR 205
>At3g11890 unknown protein
Length = 500
Score = 38.5 bits (88), Expect = 0.013
Identities = 19/58 (32%), Positives = 34/58 (57%), Gaps = 1/58 (1%)
Query: 204 KVSRVVDWLRDLGLGK-YEDVFVREEVDWDTLQWLTEEDLLSMGVTALGPRKKIVHAL 260
K + +W+ +GLG+ +E + + + + LT E L MG A+GPR+K++HA+
Sbjct: 429 KAGGLNEWVGSIGLGREFERMLRGQRMSKFQMANLTMEKLKQMGALAVGPRRKLIHAI 486
>At1g61010 putative cleavage and polyadenylation specificity factor
Length = 693
Score = 36.2 bits (82), Expect = 0.064
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 389 LTHFHLDRTRLLDL---------NIFDTDLRQMGYLIKFECFARLVNMN----------I 429
+THFH+D L +F T + Y + + ++ ++ I
Sbjct: 79 ITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDI 138
Query: 430 GIPYDKLHILPLNQKVEIAGIDVTCLDANHCPGSIIILFQPPNGKAVLHTGDF 482
DK+ ++ +Q VE+ GI C A H G+ + + G +L+TGD+
Sbjct: 139 NKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIA-GVRILYTGDY 190
>At2g03440 unknown protein
Length = 187
Score = 35.0 bits (79), Expect = 0.14
Identities = 21/62 (33%), Positives = 34/62 (53%), Gaps = 4/62 (6%)
Query: 270 SNEKPEDALAEPRRNRNQNVKMQP--HRPERKVDGTSKPAANKKITEYFPGFATNGKKVS 327
S++KPE + EP N+N+ +P H+P T KP +N T + P ATN + ++
Sbjct: 13 SDKKPESSDPEPNHNKNKPGHTEPTTHKPGHGEPTTHKPVSNTDPTTHRP--ATNAELMA 70
Query: 328 TA 329
+A
Sbjct: 71 SA 72
>At2g27660 hypothetical protein
Length = 718
Score = 32.7 bits (73), Expect = 0.71
Identities = 20/89 (22%), Positives = 36/89 (39%)
Query: 269 ASNEKPEDALAEPRRNRNQNVKMQPHRPERKVDGTSKPAANKKITEYFPGFATNGKKVST 328
A + + +++L P + N+ M RP R ++ A N + G
Sbjct: 197 AGHPQHQNSLPVPNQGSNRVRPMPMTRPNRTINPNRPIAQNAAVNGPRRQNNNLGYNAQV 256
Query: 329 APEEQQEMKSSGSVSGRNHKGKNSSTNRK 357
P E+ GS+ G + G S+TN++
Sbjct: 257 GPNGPNELTGQGSMDGSGYNGSASATNKE 285
>At2g46020 putative SNF2 subfamily transcriptional activator
Length = 1245
Score = 31.6 bits (70), Expect = 1.6
Identities = 22/105 (20%), Positives = 47/105 (43%), Gaps = 2/105 (1%)
Query: 271 NEKPEDALAEPRRNRNQNVKMQPHRPERKVDGTSKPAANKKITEYFPGFATNGKKVSTAP 330
+E E+ + +P R ++++++P + +VDG+ PAA + + + + V +
Sbjct: 821 DEGDEEQVLQPTIKRKRSIRLRPRQTAERVDGSEMPAAQP--LQVDRSYRSKLRTVVDSH 878
Query: 331 EEQQEMKSSGSVSGRNHKGKNSSTNRKLRDVPKWCSIEGTPFRVD 375
+Q+ S S K +ST++ PK + T V+
Sbjct: 879 SSRQDQSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNATQLTVE 923
>At4g26445 predicted protein
Length = 696
Score = 31.2 bits (69), Expect = 2.1
Identities = 28/104 (26%), Positives = 44/104 (41%), Gaps = 12/104 (11%)
Query: 258 HALCEFRKGIAASNEKPEDALAEPRRNRNQNV-KMQPHRPERKVDGTSKPAANKKITEYF 316
H F I N + E L P +R+ +V K+ RP +G+ +K+ ++
Sbjct: 408 HRSNSFPSSILRDNSEKESGLELPNLHRSHSVGKVGEKRPG---EGSDLEEGSKRQRDWV 464
Query: 317 PGFATNGKKVSTAPEEQQEMKSSGSVSGRNHKGKNSSTNRKLRD 360
VS A E K+SG+ +GK SS N++L D
Sbjct: 465 A--------VSEANERFNMFKTSGNQCDPEEEGKTSSFNKRLID 500
>At3g04980 hypothetical protein, contains DnaJ motif: prokaryotic
heat shock protein motif
Length = 1165
Score = 31.2 bits (69), Expect = 2.1
Identities = 35/137 (25%), Positives = 55/137 (39%), Gaps = 23/137 (16%)
Query: 43 HKLETTAFGGSGKENVPPNASSSTIHDDGYEIENCSLDFIPSTIDSVGTALTDSSSSSSS 102
HK+ G KE+VPPN+ YE++ +L +D+V + DS
Sbjct: 660 HKVPAVKMTGKEKESVPPNS---------YELDPAALPKDIFQVDAVDMEM-DSEILKGK 709
Query: 103 ASVSAFVISSPVKVKMKGTAYFGNSIESKLVVSRANAINNAEAGSELNLSDELDGSVRCP 162
A P KV K A + + R + ++ + G NL + + GS R
Sbjct: 710 A-------DGPYKVGAKAKAVQETASSPR---KRQKSDDDNDDGVCSNLGEVIGGSNRSH 759
Query: 163 L---CEVDISNLTEEQR 176
+ CEVD N + + R
Sbjct: 760 IFSSCEVDDKNTSTKSR 776
>At4g13750 hypothetical protein
Length = 2137
Score = 30.4 bits (67), Expect = 3.5
Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 12/149 (8%)
Query: 52 GSGKENVPP-------NASSSTIHDDGYEIENCSLDFIPSTI---DSVGTAL-TDSSSSS 100
G G+E VPP N + DG E+ +L F+ I DS+ AL +
Sbjct: 971 GDGEEWVPPCKVLRNWNEKIRVLLKDGLLQEHLALGFLDKDIVLSDSLSRALGIEDYGPK 1030
Query: 101 SSASVSAFVISSPVKVKMKGTAYFGNSIESKLVVSRANAINNAEAGSELNLSDELDGSVR 160
+ + + + ++ G + + + ++ R++ N E G + +L D+L
Sbjct: 1031 TLVQILSSLSHKNGCLQSMGFTWLSSILTELYLLFRSSGHGNVELGIDKSLIDDLHKIPF 1090
Query: 161 CPLCEVDISNLTEEQRHLHTNDC-LDRGD 188
PL ++L E LH + LD GD
Sbjct: 1091 IPLSNGKFTSLDEGAVWLHHDTTGLDLGD 1119
>At1g15940 T24D18.4
Length = 1012
Score = 30.4 bits (67), Expect = 3.5
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 21/103 (20%)
Query: 251 GPRKKIVHAL-------CEFRKGIAASNEKPEDAL-------AEPRRNRNQNVKMQPHRP 296
G ++K+ A+ C+ ++ + +E ED+L AEP R + + H
Sbjct: 752 GKKQKVTQAMHRKIEKDCDEQEDLETKDE--EDSLKLGKESDAEPDRMEDHQELPENHNV 809
Query: 297 ERKVDGTSKPAANKKITEYFPGFATNGKKVSTAPE-EQQEMKS 338
E K DG + AA + E TNG++ + PE + +E KS
Sbjct: 810 ETKTDGEEQEAAKEPTAE----SKTNGEEPNAEPETDGKEHKS 848
>At5g28210 mRNA capping enzyme - like
Length = 625
Score = 30.0 bits (66), Expect = 4.6
Identities = 17/55 (30%), Positives = 30/55 (53%), Gaps = 3/55 (5%)
Query: 28 IPLTQTATIHRP---LKKHKLETTAFGGSGKENVPPNASSSTIHDDGYEIENCSL 79
I LT T + P L+++++E SG+++VP N S +T + + EN +L
Sbjct: 99 IDLTNTTRYYHPNTELRQNRIEYVKIRCSGRDSVPDNVSVNTFVHEVTQFENHNL 153
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,378,629
Number of Sequences: 26719
Number of extensions: 747524
Number of successful extensions: 2257
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2203
Number of HSP's gapped (non-prelim): 60
length of query: 700
length of database: 11,318,596
effective HSP length: 106
effective length of query: 594
effective length of database: 8,486,382
effective search space: 5040910908
effective search space used: 5040910908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0133.3