BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0128.2
(265 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g27770 unknown protein 33 0.21
At4g08550 hypothetical protein 30 1.0
At5g42860 unknown protein 30 1.3
At4g05360 putative protein 30 1.3
At5g35700 fimbrin 29 2.3
At4g22450 hypothetical protein 29 2.3
At3g18610 unknown protein 29 2.3
At1g61510 hypothetical protein 29 2.3
At5g60410 putative protein 29 3.0
At2g43900 putative inositol polyphosphate 5'-phosphatase 29 3.0
At1g20390 hypothetical protein 29 3.0
At5g44350 ethylene-regulated nuclear protein ERT2-like protein 28 3.9
At3g21290 unknown protein 28 3.9
At3g17340 hypothetical protein 28 3.9
At1g76870 hypothetical protein 28 3.9
At1g31780 hypothetical protein 28 3.9
At5g44280 putative protein 28 5.1
At4g17570 unknown protein 28 5.1
At3g24340 hypothetical protein 28 5.1
At2g21260 putative NADPH dependent mannose 6-phosphate reductase 28 5.1
>At2g27770 unknown protein
Length = 320
Score = 32.7 bits (73), Expect = 0.21
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 99 KRTVSITSHLSTGNPSTS-EDWRTSDKCIDDKCLFRSVWNSVQSLKNNRLTARGFTRVNA 157
+ ++++T LS + S+S + T++ CI L S+ S+ S+ L+ +V
Sbjct: 10 ENSINVTHPLSISSSSSSCSKYSTNNVCISPS-LIPSIQTSITSIYRITLSKHLIIKVTW 68
Query: 158 ETGHNDD-LSLNIAPCDDNEVVTLK 181
HN++ LS+++A D N TLK
Sbjct: 69 CNPHNNNGLSISVASADQNPSTTLK 93
>At4g08550 hypothetical protein
Length = 587
Score = 30.4 bits (67), Expect = 1.0
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 65 DSDDGDKTTVSQEVITVDSDSESHNSPSSSDPTQKRTVSITSHLS----TGNPSTSEDW 119
+ ++GD E+++VDS + +S SS++ T+ ++ S N STS W
Sbjct: 80 EEEEGDNNVSLDEIMSVDSSDDDDDSESSAEITKACEETVVDERSGISQESNSSTSSAW 138
>At5g42860 unknown protein
Length = 320
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/55 (36%), Positives = 27/55 (48%), Gaps = 3/55 (5%)
Query: 43 LSMKLPKMSAK*QSYYSLSLNSDSDDGDKTTV---SQEVITVDSDSESHNSPSSS 94
LS P S + +Y+ S + DS DG+KT S V+T S H+ SSS
Sbjct: 12 LSASSPTRSPRRPAYFVQSPSRDSHDGEKTATSFHSTPVLTSPMGSPPHSHSSSS 66
>At4g05360 putative protein
Length = 735
Score = 30.0 bits (66), Expect = 1.3
Identities = 24/83 (28%), Positives = 36/83 (42%), Gaps = 4/83 (4%)
Query: 41 HLLSMKLPKMSAK*QSYYSLSLNSDSDDGDKTTVSQEVITVDSDSESHNSPSSSDPTQKR 100
H+ S M K + + DSDDG++ + ++ + S S S+S PT
Sbjct: 388 HMCSECANLMKEKEKKFIMSDSEIDSDDGEEL---KNLVAFTTFESSIASASASGPTSAS 444
Query: 101 TVSITSHLSTGNPSTSEDWRTSD 123
TS +TG P+T D SD
Sbjct: 445 ATGSTSASATG-PATGSDNDQSD 466
>At5g35700 fimbrin
Length = 687
Score = 29.3 bits (64), Expect = 2.3
Identities = 16/48 (33%), Positives = 24/48 (49%), Gaps = 9/48 (18%)
Query: 57 YYSLSLNSDS---------DDGDKTTVSQEVITVDSDSESHNSPSSSD 95
Y+SL SD+ DDGD +V+ E+ + D S +SP+ D
Sbjct: 618 YWSLQQQSDTESTVSEDATDDGDANSVAGEISNLSIDGASESSPTVQD 665
>At4g22450 hypothetical protein
Length = 457
Score = 29.3 bits (64), Expect = 2.3
Identities = 21/64 (32%), Positives = 29/64 (44%), Gaps = 4/64 (6%)
Query: 61 SLNSDSDDGDKTTVSQEVITVDSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDWR 120
S++ D DDGD T + IT D D ES P + D + + T PS S +
Sbjct: 152 SMHQD-DDGDSTQIP---ITQDDDGESRQIPLNLDDDEATHILPTQSNVGNGPSYSSKSK 207
Query: 121 TSDK 124
+S K
Sbjct: 208 SSKK 211
>At3g18610 unknown protein
Length = 636
Score = 29.3 bits (64), Expect = 2.3
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 63 NSDSDDG-----DKTTVSQEVITVDSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSE 117
+S SDDG + T +E I V DS +S P K+ + + S+SE
Sbjct: 210 SSSSDDGSSSDEEPTPAKKEPIVVKKDSSDESSSDEETPVVKKKPTTVVKDAKAESSSSE 269
Query: 118 DWRTSD 123
+ +SD
Sbjct: 270 EESSSD 275
Score = 29.3 bits (64), Expect = 2.3
Identities = 21/64 (32%), Positives = 33/64 (50%), Gaps = 5/64 (7%)
Query: 64 SDSDDGDKTTVSQEVITVDSDSESHNSPSSSD---PTQKRTVSITSHLSTGNPSTSEDWR 120
SDSD+ +KT + + +S SE + SS + P +KR I + S+S+D
Sbjct: 70 SDSDEEEKTKETPSKLKDESSSEEEDDSSSDEEIAPAKKRPEPIKK--AKVESSSSDDDS 127
Query: 121 TSDK 124
TSD+
Sbjct: 128 TSDE 131
>At1g61510 hypothetical protein
Length = 608
Score = 29.3 bits (64), Expect = 2.3
Identities = 21/64 (32%), Positives = 29/64 (44%), Gaps = 4/64 (6%)
Query: 61 SLNSDSDDGDKTTVSQEVITVDSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDWR 120
S++ D DDGD T + IT D D ES P + D + + T PS S +
Sbjct: 27 SMHQD-DDGDSTQIP---ITQDDDGESRQIPLNLDDDEAAHILPTQSNVGNGPSYSSKSK 82
Query: 121 TSDK 124
+S K
Sbjct: 83 SSKK 86
>At5g60410 putative protein
Length = 399
Score = 28.9 bits (63), Expect = 3.0
Identities = 34/141 (24%), Positives = 50/141 (35%), Gaps = 17/141 (12%)
Query: 89 NSPSSSDPTQKRTVSITSHLSTGNPSTSEDWRTSDKCIDDKCLFRSVWNSVQSLKNNRLT 148
N +S+ + +RT IT D + ++DK LFR W L+ N +
Sbjct: 204 NDGASTMQSVERTFQITRADKDLLAKPEYDVQAWCMLLNDKVLFRMQWPQYADLQVNGVP 263
Query: 149 ARGFTRVNAETGHNDDLSLNIAPCDDNEVVTLKPSGADGEPAWFYLH-----GYIFNELF 203
R R + L + DD +V S P F LH YI N
Sbjct: 264 VRAINRPGGQL-------LGVNGRDDGPIVCFLSSLLSSNP--FELHIGVNLSYIENLAI 314
Query: 204 MKLPFSTFVCDVLTFLNVAPC 224
+ F+ F +L F + C
Sbjct: 315 SDVSFNHF---ILLFWQITSC 332
>At2g43900 putative inositol polyphosphate 5'-phosphatase
Length = 1305
Score = 28.9 bits (63), Expect = 3.0
Identities = 22/70 (31%), Positives = 33/70 (46%), Gaps = 5/70 (7%)
Query: 59 SLSLNSDSDDGDKTTVSQEVITVDSDSESH--NSPSSSDPTQKRT---VSITSHLSTGNP 113
S S + DGD + SQ+ DS S+SH N SS + K+ S SH +
Sbjct: 1204 SCSKSQKKSDGDTNSKSQKKGDGDSSSKSHKKNDGDSSSKSHKKNDGDSSSKSHKKSDGD 1263
Query: 114 STSEDWRTSD 123
S+S+ + S+
Sbjct: 1264 SSSKSHKKSE 1273
>At1g20390 hypothetical protein
Length = 1791
Score = 28.9 bits (63), Expect = 3.0
Identities = 30/104 (28%), Positives = 50/104 (47%), Gaps = 16/104 (15%)
Query: 26 RLVPLFSLYFSCFSIHLLSMKLPKM-SAK*QSYYSLSLNSDSD--------DGDKTTV-S 75
++V L + F F + K+P+ +A + +L+L SDSD DK ++ S
Sbjct: 1301 KIVQLMTKDFENFKLS----KIPRGDNAPADALAALALTSDSDLRRIIPVESIDKPSIDS 1356
Query: 76 QEVITVDSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDW 119
+ + + + S N+P +DPT R V I +LS G S+ W
Sbjct: 1357 TDAVEIVNTIRSSNAPDPADPTDWR-VEIRDYLSDGT-LPSDKW 1398
>At5g44350 ethylene-regulated nuclear protein ERT2-like protein
Length = 334
Score = 28.5 bits (62), Expect = 3.9
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 64 SDSDDGDKTTVSQEVI----------TVDSDSESHNSPSSSDPTQKRTVSITSHLSTGNP 113
S++ D DK +++E I + E+ + S ++ ++ + ++I LS
Sbjct: 165 SNNTDKDKNAIAREKIETFDETRVPKAIPCPEETEHVVSETEVSKLKGLTIRDLLSKDEK 224
Query: 114 STSEDWRTSDKCI 126
STS+ WR K +
Sbjct: 225 STSKSWRLKSKIV 237
>At3g21290 unknown protein
Length = 1848
Score = 28.5 bits (62), Expect = 3.9
Identities = 34/108 (31%), Positives = 52/108 (47%), Gaps = 8/108 (7%)
Query: 82 DSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDWRTSDKCIDDKC-LFRSVWNSVQ 140
DSDS+S NS S SD K S S+ + ++S SD+ +D R + Q
Sbjct: 520 DSDSDSDNSDSGSD--SKSAAGSDSGSSSDSEASSNSKDGSDEDVDIMSDGDREPLLTTQ 577
Query: 141 SLKNNR--LTARGFTRVNAETGHNDDLSLNIAPCDDNEVVTLKPSGAD 186
SL+ + L G + V E GHN D +++I D++ V + G+D
Sbjct: 578 SLEQDAIDLPGHGSSAVEIE-GHNSD-AVDI-DGHDSDAVDIDGHGSD 622
>At3g17340 hypothetical protein
Length = 791
Score = 28.5 bits (62), Expect = 3.9
Identities = 16/63 (25%), Positives = 26/63 (40%)
Query: 65 DSDDGDKTTVSQEVITVDSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDWRTSDK 124
D + G++ T S+E + D DSES + + +R + + L D D
Sbjct: 709 DGEPGEEETESEETDSNDEDSESDECEETEEEFLERYAKVAAELEDSEVIEEADEEDDDH 768
Query: 125 CID 127
ID
Sbjct: 769 EID 771
>At1g76870 hypothetical protein
Length = 385
Score = 28.5 bits (62), Expect = 3.9
Identities = 30/117 (25%), Positives = 47/117 (39%), Gaps = 11/117 (9%)
Query: 45 MKLPKMSAK*QSYYSLSLNS--DSDDGDKTTVSQEVITVDSDSESHNSPSSSDPTQKRTV 102
+ LP A +S + ++L S D D+ + E + D D E + + SD KR
Sbjct: 211 LHLPHDPAVQRSLHLITLGSRDDHDNDEHGKHQNEDLDDDDDYEEDHDGALSDRPLKRLR 270
Query: 103 SITSHLSTGNPSTSEDWRTSDKCIDDKCLFRSVWNSVQSLKNNRLTARGFTRVNAET 159
SH G+P +K D CL RS + + + + A G R E+
Sbjct: 271 QSQSHEDVGHP---------NKGYDVPCLPRSQADVNRGISLDSRKAAGLQRQQIES 318
>At1g31780 hypothetical protein
Length = 706
Score = 28.5 bits (62), Expect = 3.9
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 68 DGDKTTVSQEVITVDSDSESHNSPSSSDPTQ----KRTVSITSHLSTGNPSTSEDWRTSD 123
+G + + +I S NS +++ TQ K+ T NP SE RT+
Sbjct: 192 EGAYERLCRTIICFQKGSPFLNSFRANEKTQYWLLKQNAECRKLGDTDNPEVSELLRTAV 251
Query: 124 KCIDDK-CLFRSVWNSVQSLKNNRLTAR 150
+C+ ++ LF+ V +L++N L R
Sbjct: 252 RCLKERPVLFKYCAEEVGNLRHNALFRR 279
>At5g44280 putative protein
Length = 486
Score = 28.1 bits (61), Expect = 5.1
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Query: 84 DSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDWRTSDKCID-DKCLFRSVWNSVQSL 142
D +S + ++ QK+ ++ ST +PS+S + + C D D ++R L
Sbjct: 293 DKDSSSDERGTEVRQKKRRKRSTSRSTQHPSSSGANKNNGNCADNDTEVYRDTKGISPGL 352
Query: 143 K-NNRLTA--RGFTRVNAETGHNDD--LSLNIAPCDDNEVVTLKPSGADGEPAWF 192
N + A RG TR N G+N S ++ N++V S DG F
Sbjct: 353 VWNPEILAWGRGGTRSNTRHGNNTSGGSSKSVRNARVNKLVEYLRSSVDGSSVEF 407
>At4g17570 unknown protein
Length = 510
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/62 (25%), Positives = 30/62 (47%), Gaps = 2/62 (3%)
Query: 81 VDSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDWRTSDKCIDDKCLFRSVWNSVQ 140
++ D+ + +S S+ + +S + G+PS S W T+ C C+ R +SV+
Sbjct: 108 IEEDASNRSSSGSAVSNSESCAQFSS--ADGSPSQSNAWDTTVPCKRRTCVGRPKSSSVE 165
Query: 141 SL 142
L
Sbjct: 166 KL 167
>At3g24340 hypothetical protein
Length = 1132
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 70 DKTTVSQEVITVDSDSESHNSPSSSDPTQKRTVSITSHLSTGNPSTSEDWRTSD 123
+KT VS EV+++ S S+ P T R +G ED SD
Sbjct: 228 EKTYVSDEVVSLSSSSDDEEDPLEELGTDSREEVSGEDRDSGESDMDEDANDSD 281
>At2g21260 putative NADPH dependent mannose 6-phosphate reductase
Length = 309
Score = 28.1 bits (61), Expect = 5.1
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 98 QKRTVSITSHLSTGNPSTSEDWRTSDKCIDDKCL 131
QK + +T+H G + + +W + C+DD L
Sbjct: 199 QKHGICVTAHTPLGGATANAEWFGTVSCLDDPVL 232
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,595,570
Number of Sequences: 26719
Number of extensions: 286023
Number of successful extensions: 1041
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1017
Number of HSP's gapped (non-prelim): 43
length of query: 265
length of database: 11,318,596
effective HSP length: 97
effective length of query: 168
effective length of database: 8,726,853
effective search space: 1466111304
effective search space used: 1466111304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0128.2