BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0117b.7
(281 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45250 unknown protein 104 5e-23
At4g38280 putative protein 84 6e-17
At1g75080 unknown protein 36 0.026
At4g29100 putative bHLH transcription factor (bHLH068) 34 0.10
At1g49490 hypothetical protein 32 0.38
At1g16130 unknown protein 32 0.50
At5g54350 unknown protein 31 0.85
At4g14370 disease resistance N like protein 31 0.85
At5g61550 putative protein 30 1.1
At3g10720 pectinesterase like protein 30 1.1
At1g28280 unknown protein 30 1.1
At5g24710 unknown protein 30 1.5
At1g35490 unknown protein 30 1.5
At3g10730 unknown protein 30 1.9
At1g30320 unknown protein 30 1.9
At2g28440 En/Spm-like transposon protein 29 2.5
At1g71030 transcription factor like protein 29 2.5
At4g32970 putative protein 29 3.2
At3g19580 zinc finger protein, putative 29 3.2
At3g11720 unknown protein 29 3.2
>At2g45250 unknown protein
Length = 211
Score = 104 bits (260), Expect = 5e-23
Identities = 84/238 (35%), Positives = 113/238 (47%), Gaps = 75/238 (31%)
Query: 41 KDKDPDTDSNRIS--GTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAF 98
KD + + + +S G K+P D P + A+G LVYVRR+ E + K AA
Sbjct: 39 KDSEKAIEQDTVSSIGVKKPPVDSPAT--------TNAASGRLVYVRRRVEVDTSKAAA- 89
Query: 99 ENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISC 158
T P P P AP P +P S
Sbjct: 90 -------------------STTNPNPP---------PTKAP------------PQIPSS- 108
Query: 159 GKSTMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQ-- 216
P ++ + PT + K + WEERY LQMLL KL+QSD+ ++VQ
Sbjct: 109 --------PAQAQ----AQEPTPTSHK----LDWEERYLHLQMLLNKLNQSDRTDHVQNM 152
Query: 217 -----MLQSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAKKFKAPAD 269
+L SLSS ELS+HAV+LEKR+IQ SLEEA+E+QRVA LNVLG+S K+ ++
Sbjct: 153 FPLLLVLWSLSSAELSKHAVDLEKRSIQFSLEEAREMQRVAALNVLGRSVNSIKSTSN 210
>At4g38280 putative protein
Length = 159
Score = 84.3 bits (207), Expect = 6e-17
Identities = 67/203 (33%), Positives = 86/203 (42%), Gaps = 70/203 (34%)
Query: 42 DKDPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENP 101
+K + DS G K+P + P + A+G LVYVRR+ E + K AA
Sbjct: 12 EKANEQDSVSSIGAKKPPLESPAT--------TNAASGRLVYVRRRVEVDTSKAAA---- 59
Query: 102 TNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISCGKS 161
T P P P AP + SS + P+
Sbjct: 60 ----------------STTNPNPP---------PTKAPLQIPSSPAQEPTPTSH------ 88
Query: 162 TMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSL 221
+ WEERY LQMLL KL+QSD+ ++VQML SL
Sbjct: 89 ---------------------------KLDWEERYLHLQMLLNKLNQSDRTDHVQMLWSL 121
Query: 222 SSVELSRHAVELEKRAIQLSLEE 244
SS ELS+HAV+LEKR+IQ SLEE
Sbjct: 122 SSAELSKHAVDLEKRSIQFSLEE 144
>At1g75080 unknown protein
Length = 336
Score = 35.8 bits (81), Expect = 0.026
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 18/110 (16%)
Query: 99 ENPTNNAFCQP-PRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPIS 157
++P ++AF P P S ++ P P EPN + F PF I SS PS+ IS
Sbjct: 113 QSPLSSAFQSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSS-LPSLRIS 171
Query: 158 CGKSTMKLAPVESNCVTTS--SGPTIGNPKGLIDMQWEERYQQLQMLLRK 205
++C T S PT NPK L WE +Q + ++
Sbjct: 172 ------------NSCPVTPPVSSPTSKNPKPL--PNWESIAKQSMAIAKQ 207
>At4g29100 putative bHLH transcription factor (bHLH068)
Length = 407
Score = 33.9 bits (76), Expect = 0.10
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
Query: 108 QPPRQLCSEEETALPKPQLKEPNV-------SCFPAFAPFPLTSSISSSGRPSVPISCGK 160
+PP L ++ LP N + FP F P P TSS SSS PS+P +
Sbjct: 30 RPPPPLMGHQQAPLPPHMTPNNNYLRPRMMPTPFPHFLPSPATSSSSSSSSPSLPNNPNL 89
Query: 161 STMKLAPVESNCVTTSSGPTIGNPKGLIDMQWEERYQQL 199
S+ +ESN + S G + M EER + +
Sbjct: 90 SSW----LESNDLPPESWSLSQLLLGGLMMGEEERLEMM 124
>At1g49490 hypothetical protein
Length = 847
Score = 32.0 bits (71), Expect = 0.38
Identities = 21/71 (29%), Positives = 32/71 (44%), Gaps = 2/71 (2%)
Query: 65 NHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETALPKP 124
N+ LQ P A L V R + KC+ N ++ PPR SE + + P+P
Sbjct: 354 NNCLQNRPSQKPAKQCLPVVSRPVDCSKDKCSGGSNGGSSPSPNPPR--TSEPKPSKPEP 411
Query: 125 QLKEPNVSCFP 135
+ +P+ S P
Sbjct: 412 VMPKPSDSSKP 422
>At1g16130 unknown protein
Length = 748
Score = 31.6 bits (70), Expect = 0.50
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 31 LTSVGSSSVLKDKDPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEA 90
L ++ + V+ K P T S +GT +PL+ P+N Q SP T LV V K +A
Sbjct: 81 LVNISLNGVVHIKAPVTSSGCSTGTSQPLTPPPLNVAGQGSPYFLTDKNLLVAVGCKFKA 140
Query: 91 -------ELGKCAAFENPTNNAFCQPPRQLCSEE---ETALPKPQ 125
++ C + N N++ + ++C+ +T +P+ Q
Sbjct: 141 VMAGITSQITSCESSCNERNSSSQEGRNKICNGYKCCQTRIPEGQ 185
>At5g54350 unknown protein
Length = 279
Score = 30.8 bits (68), Expect = 0.85
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 63 PVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETALP 122
P N+ + +PGNS+A+ H KS +GK A EN + ++ + L S E+
Sbjct: 158 PRNNFVAGNPGNSSASTH-----SKSLFSMGKNQAMENGSGSSH---SKSLFSMEKNKAV 209
Query: 123 KPQLKEPNVSCFPAFAPFPLTSSISS 148
+P + PN + F P P S SS
Sbjct: 210 EPPVAPPNGTTDLLF-PSPENGSGSS 234
>At4g14370 disease resistance N like protein
Length = 1996
Score = 30.8 bits (68), Expect = 0.85
Identities = 25/108 (23%), Positives = 40/108 (36%), Gaps = 16/108 (14%)
Query: 40 LKDK--DPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANG---HLVYVRRKSEAELGK 94
LK+K + T+ R+ T R SD V H + HL ++ K E+ +
Sbjct: 1743 LKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSVAEHLRELKEKLPPEVSR 1802
Query: 95 CAAFENPTNNA-----------FCQPPRQLCSEEETALPKPQLKEPNV 131
C AFE+ + A C P L + P ++ N+
Sbjct: 1803 CEAFESMNSQAEAYLNASEASESCLPTTSLGMGQRDPTPSTNTQDQNI 1850
>At5g61550 putative protein
Length = 845
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 203 LRKLDQSDQVEYVQMLQSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGKSAK 262
L +L+Q E ++++ E+++ EK+ + +++EA++++ + + L +
Sbjct: 391 LTELNQRRFEESEKLVELKEKEEVAKDTASKEKQRYEEAMKEAEKVKELMMKEALHRREA 450
Query: 263 KFKAPADHDECSDKLKTS 280
+FKA D E DKL+ S
Sbjct: 451 EFKAERDARE-KDKLQAS 467
>At3g10720 pectinesterase like protein
Length = 619
Score = 30.4 bits (67), Expect = 1.1
Identities = 23/75 (30%), Positives = 37/75 (48%), Gaps = 12/75 (16%)
Query: 98 FENPTNNAF---CQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFP-----LTSSISSS 149
FE P + F QPP + + +LP Q + P+++C P+P + +++ SS
Sbjct: 45 FEPPVESPFFPPSQPPIFVPPSQPPSLPPSQSQSPSLAC--KSTPYPKLCRTILNAVKSS 102
Query: 150 GRPSVPISCGKSTMK 164
PS P GK T+K
Sbjct: 103 --PSDPYRYGKFTIK 115
>At1g28280 unknown protein
Length = 247
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/104 (26%), Positives = 44/104 (41%), Gaps = 20/104 (19%)
Query: 45 PDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKS--EAELGKCAAFENPT 102
PD S S + P+ P + +S+A+G +Y RR S ++ NP
Sbjct: 96 PDPRSTPSSFSIPPIKAVP-----NKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPV 150
Query: 103 NNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSI 146
N+AF PR KP++ P++ FP+ P+T I
Sbjct: 151 NSAFS--PR-----------KPEILSPSILDFPSLVLSPVTPLI 181
>At5g24710 unknown protein
Length = 1003
Score = 30.0 bits (66), Expect = 1.5
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 19/156 (12%)
Query: 32 TSVGSSSVLKDKDPDTDSNRISGTKRPLSDYPVNHHLQQSPGNSTANGHLVYVRRKSEAE 91
T S+ + +DP S + K P+ P + + TA + ++ ++ E
Sbjct: 772 TDAASAFLASLEDPKLTSLSDASRKPPIEILPPG--MSSIFASITAPKKPLLTQKTAQPE 829
Query: 92 LGKCAAFENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSCFPAFAPFPLTSSISSSGR 151
+ K A E PT + L E + PQ + + A +P P T++++ S
Sbjct: 830 VAKPLALEEPT--------KPLAIEAPPSSEAPQTESAPETAAAAESPAPETAAVAESPA 881
Query: 152 PSVPISCGKSTMKLAPVESNCVTTSSGP---TIGNP 184
P G + + AP GP T+ P
Sbjct: 882 P------GTAAVAEAPASETAAAPVDGPVTETVSEP 911
>At1g35490 unknown protein
Length = 300
Score = 30.0 bits (66), Expect = 1.5
Identities = 23/106 (21%), Positives = 44/106 (40%), Gaps = 2/106 (1%)
Query: 156 ISCGKSTMKLAPVESNCVTTSSGPTI--GNPKGLIDMQWEERYQQLQMLLRKLDQSDQVE 213
+SCG M P+E + G + P+ D + + + LR+L+ +E
Sbjct: 136 MSCGALNMSSKPIEKHVSKMKEGTSTKPDGPRSKTDSKRIKHQNAHRARLRRLEYISDLE 195
Query: 214 YVQMLQSLSSVELSRHAVELEKRAIQLSLEEAKELQRVAVLNVLGK 259
+ + E+S L+++ + LS+E QR+ L + K
Sbjct: 196 RTIQVLQVEGCEMSSAIHYLDQQLLMLSMENRALKQRMDSLAEIQK 241
>At3g10730 unknown protein
Length = 455
Score = 29.6 bits (65), Expect = 1.9
Identities = 34/115 (29%), Positives = 53/115 (45%), Gaps = 5/115 (4%)
Query: 167 PVESNCVTTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSLSSVEL 226
P+E+ V + I GL+ + Q++ L +K+D S+ Q + S SSV
Sbjct: 144 PIETEMVLSELESRISAVDGLVKTTTKMMQVQVEFLDKKMD-SESRALRQTIDSTSSVLH 202
Query: 227 SR-HAVELEKRAIQLSLEE--AKELQRVAVLNVLGKSAKKFKAPADHDECSDKLK 278
S VE + +Q+S++E AK L L + + KK K D D DKL+
Sbjct: 203 SELKKVESKTERLQVSVDELNAKPLVSREELERVYEELKKGKV-GDSDVNIDKLR 256
>At1g30320 unknown protein
Length = 509
Score = 29.6 bits (65), Expect = 1.9
Identities = 36/162 (22%), Positives = 73/162 (44%), Gaps = 12/162 (7%)
Query: 117 EETALPKPQLKEPNVSCFPAFAPFPL---TSSISSSGRPSVP--ISCGKSTMK-LAPVES 170
E T +P +EP+ S P A PL TSS+ S+ R P S K+T + L+ E
Sbjct: 293 EMTPIPS---QEPSRSVTPVGATTPLRSPTSSLPSTPRGGQPEESSMSKNTRRELSEEEE 349
Query: 171 NCVTTSSGPTIGNPKGLIDMQ-WEERYQQLQMLLR-KLDQSDQVEYVQMLQSLSSVELSR 228
T +G G +++ W + ++ +++ ++E+ + + E S+
Sbjct: 350 KAKTRREIVALGVQLGKMNIAAWASKEEEENKKNNGDAEEAQKIEFEKRATAWEEAEKSK 409
Query: 229 HAVELEKRAIQLSLEEAKELQRV-AVLNVLGKSAKKFKAPAD 269
H ++ I++ E++E ++ A + + ++ KA A+
Sbjct: 410 HNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQMKAEAE 451
>At2g28440 En/Spm-like transposon protein
Length = 268
Score = 29.3 bits (64), Expect = 2.5
Identities = 28/145 (19%), Positives = 48/145 (32%), Gaps = 2/145 (1%)
Query: 8 KQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSDYPVNHH 67
++P+ D + S + D+ + +S S L + + ++ + P D P+
Sbjct: 37 REPSTDSPLSPSSSPEEDSPLSPSSSPEEDSPLPPSSSPEEDSPLAPSSSPEVDSPLAP- 95
Query: 68 LQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETALPKPQLK 127
SP + S +P + A P L P PQ +
Sbjct: 96 -SSSPEVDSPQPPSSSPEADSPLPPSSSPEANSPQSPASSPKPESLADSPSPPPPPPQPE 154
Query: 128 EPNVSCFPAFAPFPLTSSISSSGRP 152
P+ +P AP P S S P
Sbjct: 155 SPSSPSYPEPAPVPAPSDDDSDDDP 179
>At1g71030 transcription factor like protein
Length = 195
Score = 29.3 bits (64), Expect = 2.5
Identities = 24/105 (22%), Positives = 40/105 (37%), Gaps = 4/105 (3%)
Query: 63 PVNHHLQQSPGNSTANGHLVYVRRKSEAEL--GKCAAFENPTNNAFCQPPRQLCSEEETA 120
P NH L N + HL ++ E ++ + ++ P CSE+ T+
Sbjct: 91 PTNHRLHHHT-NYISRRHLHSSHKEHETKIISDQSSSVSESCGVTILPIPSTNCSEDSTS 149
Query: 121 LPKPQLKEPNVSCFPAFAPFPLTSSISSSGRPSVPISCGKSTMKL 165
+ L + N+ PA P + S S S G+ T+ L
Sbjct: 150 TGRSHLPDLNIGLIPAVTSLP-ALCLQDSSESSTNGSTGQETLLL 193
>At4g32970 putative protein
Length = 743
Score = 28.9 bits (63), Expect = 3.2
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 29/100 (29%)
Query: 57 RPLSDYPVNH----------HLQQSPGNSTANGHLVY------VRRKSEAE-------LG 93
RP D+P+N H + P N T H VY + R SE E G
Sbjct: 141 RPTHDWPINQKLFTLDVMYLHDKSGPDNCT---HDVYDSLVDAIERVSEYEGYIFEGSHG 197
Query: 94 KCAAFENPTNNAFCQPPRQLCSEEETALPKPQLKEPNVSC 133
+ + PP Q C++ + LPKP K+P VSC
Sbjct: 198 LSQSVFRRMSTLLSHPP-QRCAQVD--LPKPPAKKPAVSC 234
>At3g19580 zinc finger protein, putative
Length = 273
Score = 28.9 bits (63), Expect = 3.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 174 TTSSGPTIGNPKGLIDMQWEERYQQLQMLLRKLDQSDQVEYVQMLQSLS 222
++SS P PK EE Y L +L+ DQ Q + Q QSL+
Sbjct: 48 SSSSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLT 96
>At3g11720 unknown protein
Length = 542
Score = 28.9 bits (63), Expect = 3.2
Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 26/191 (13%)
Query: 2 DLPNRDKQPTVDVKKTASRDLQNDNKIMALTSVGSSSVLKDKDPDTDSNRISGTKRPLSD 61
D+P +++ VD DL+ +NK +S SSS +D+D K +
Sbjct: 347 DVPEIEEEECVD-------DLKEENKSSPSSSSSSSSSSEDED-----------KNGKTR 388
Query: 62 YPVNHHLQQSPGNSTANGHLVYVRRKSEAELGKCAAFENPTNNAFCQPPRQLCSEEETAL 121
+ ++ ++Q+ G T + VR+ + E A P + S + +
Sbjct: 389 FCISPEVKQALG--TLERVISMVRKSKTDNNNTSTSSEEEEEEASSSPMQHSGSTQIVSS 446
Query: 122 PKPQLKEPNVSCF--PAFAPFPLTSSISSSGRPSVPISCGKSTMKLAPVESN---CVTTS 176
K +++PN +FA + ++ I+ + P + ++ ++ ++ C TT
Sbjct: 447 SKVCIQDPNTELLDEASFAHYHNSNKIAPAS-PEIDLTTNSEVTRITVSQATNLFCQTTE 505
Query: 177 SGPTIGNPKGL 187
+ P GL
Sbjct: 506 NSDDNYKPSGL 516
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.310 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,490,111
Number of Sequences: 26719
Number of extensions: 284119
Number of successful extensions: 731
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 715
Number of HSP's gapped (non-prelim): 37
length of query: 281
length of database: 11,318,596
effective HSP length: 98
effective length of query: 183
effective length of database: 8,700,134
effective search space: 1592124522
effective search space used: 1592124522
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0117b.7