BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0112.11
(1331 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60170 putative protein 1499 0.0
At1g32590 hypothetical protein, 5' partial 1326 0.0
At1g48710 hypothetical protein 1149 0.0
At3g61330 copia-type polyprotein 1146 0.0
At1g58140 hypothetical protein 1119 0.0
At3g59720 copia-type reverse transcriptase-like protein 1016 0.0
At3g25450 hypothetical protein 939 0.0
At2g15650 putative retroelement pol polyprotein 918 0.0
At2g05390 putative retroelement pol polyprotein 876 0.0
At2g05960 putative retroelement pol polyprotein 745 0.0
At5g35820 copia-like retrotransposable element 677 0.0
At1g37110 666 0.0
At2g13930 putative retroelement pol polyprotein 657 0.0
At4g21360 putative transposable element 633 0.0
At2g07550 putative retroelement pol polyprotein 627 e-179
At3g45520 copia-like polyprotein 621 e-178
At2g21460 putative retroelement pol polyprotein 616 e-176
At1g31210 putative reverse transcriptase 602 e-172
At4g03810 putative retrotransposon protein 552 e-157
At1g70010 hypothetical protein 530 e-150
>At3g60170 putative protein
Length = 1339
Score = 1499 bits (3881), Expect = 0.0
Identities = 759/1353 (56%), Positives = 976/1353 (72%), Gaps = 68/1353 (5%)
Query: 1 MAESSNFSQPAVPKFDGHYDHWALLMENLLRSKEYWPIVADGVPALA----PNANAEQIK 56
M+ S F QPA+P+FDG+YD W++ MEN LRS+E W +V +G+PA+ P + A++
Sbjct: 1 MSSSEKFVQPAIPRFDGYYDFWSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSA 60
Query: 57 IHEEAKLKDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALR 116
+ EEAKLKDLK KN+LFQ+I+R ILETIL+ TSK IW+SM+ K QGSTKVKR QLQALR
Sbjct: 61 V-EEAKLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALR 119
Query: 117 REFEVLGMKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIE 176
+EFE+L MKEGE + + RTL++VNKMK GE ++++ IV KILRSLT KFNYVVCSIE
Sbjct: 120 KEFELLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIE 179
Query: 177 ESNDVDTITIDQLQSSLLVQEQRMKGYREEEQALRATSSGKSERGRGR---TGNRGRGRG 233
ESND+ T++ID+L SLLV EQR+ G+ +EEQAL+ T + +GRGR G+RGRGRG
Sbjct: 180 ESNDLSTLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRGSRGRGRG 239
Query: 234 RG--SFNKESVECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTT 291
RG N+ VECYKCH LGHFQYECP WE++ANYAEL E+ EELLLMA E + +
Sbjct: 240 RGRSGTNRAIVECYKCHNLGHFQYECPEWEKNANYAELEEE-EELLLMAYVEQNQANRD- 297
Query: 292 LKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKL 351
+VWFLDSGCSNHM GS+EWF L+E F TVKL
Sbjct: 298 ---------------------------EVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKL 330
Query: 352 GDDSIMTVKGKGDVKLQIGGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRI 411
G+D+ M+V GKG VK+++ G+ QV EVY++PEL+NNLLS+GQL ER L+I + C++
Sbjct: 331 GNDTRMSVVGKGSVKVKVNGVTQVIPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKV 390
Query: 412 YHKDKGLIIQSRMSSNRMFAVIATMIAPT--CFST--TIKDESELWHKRYGHLGYSGLKI 467
YH KG I+++ MS NRMF ++A+ C T + E+ LWH R+GHL GLK+
Sbjct: 391 YHPSKGAIMETNMSGNRMFFLLASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKL 450
Query: 468 LAQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGPIKPKS 527
LA K MV GLP+L + C CL GKQH + +K++W++ +LQL+HSDICGPI P S
Sbjct: 451 LAHKKMVIGLPILKATKEICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPIS 510
Query: 528 NSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFN 587
+S KRY ++FIDDF RKTWVY L EKS A +FK FK EKE G L+CLRTDRGGEF
Sbjct: 511 HSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFT 570
Query: 588 SREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNW 647
S EF EFC +GI RQLTA++TPQQNGV+ERKNRTIMN VR ML+E++VP+ FW EA W
Sbjct: 571 SNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKW 630
Query: 648 SVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIY 707
SV+IQNRSPT AV+ +TPEE WSG+KP V +FR+FGC+ Y H+PD +R KLD++S KC++
Sbjct: 631 SVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVF 690
Query: 708 LGSSEESKAYRLYDPVSKKIIINRDVVFDESSGWDWSSGAEQ-----MEFFDEMVDTNEV 762
LG SEESKA+RLYDPV KKI+I++DVVFDE WDW + +E DE + N
Sbjct: 691 LGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSE 750
Query: 763 STVPILDEVEHQVHSETN-DTSPELEDNGEASVSASPGVAEEERERRGRRNVQQPVWMKE 821
PI + V S+ N +SP L +S + SP A+ RERR P WM +
Sbjct: 751 VVEPIAVASPNHVGSDNNVSSSPIL---APSSPAPSPVAAKVTRERR------PPGWMAD 801
Query: 822 FVSGE-DLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSDHWRKAMDLEIQAIERNNT 880
+ +GE + +E +S + + +DP+ +D+A K WR+AM+ EI++I +NNT
Sbjct: 802 YETGEGEEIEENLSVMLL------MMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNT 855
Query: 881 WQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYAQQQGIDFTEVFAPVARWD 940
W+L LPKG IGVKWVYKTKLNE GE++K+KARLVAKGYAQ GID+TEVFAPVAR D
Sbjct: 856 WELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLD 915
Query: 941 TIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKLHKALYG 1000
T+RTILAI++ W +FQLDVKSAFLHG++ E V+V QP+G+ G E KVYKL KALYG
Sbjct: 916 TVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYG 975
Query: 1001 LRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTGNCELLI 1060
L+QAPRAWYSRI++YF K+ F R S+HTL+ K G +IVSLYVDDLI+TG+ + +
Sbjct: 976 LKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKT-RVGNILIVSLYVDDLIFTGSDKAMC 1034
Query: 1061 SEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYAKEVLERFGMKNSNPVRNP 1120
EFK SM EF+MSDLGKM +FLG+E+ Q+ GIF+CQ +YA+EVL RFGM SN V+NP
Sbjct: 1035 DEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNP 1094
Query: 1121 VVPGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYSVSLVSRYMEKPTELHVQIV 1180
+VPGTKL K G +VD T +KQ++GSLMYLTV+RPDLMY V L+SR+M P H
Sbjct: 1095 IVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAA 1154
Query: 1181 KRVMRYLNGTVDMGIQYRR--SGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGSIAWS 1238
KR++RYL GTV++GI YRR + S+KL+++TDSDYAGD++DR+STSG+VF++ SG+I W+
Sbjct: 1155 KRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWA 1214
Query: 1239 SKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIKLSKNP 1298
SKKQ VV+LSTTEAE+IAA CACQC+WLR++L LG + + I CDNSSTI+LSK+P
Sbjct: 1215 SKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHP 1274
Query: 1299 VMHGRSKHINVRYHFLRDLVRDGRIELVHCSTE 1331
V+HG+SKHI VR+H+LRDLV ++L +C TE
Sbjct: 1275 VLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTE 1307
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 1326 bits (3431), Expect = 0.0
Identities = 676/1294 (52%), Positives = 884/1294 (68%), Gaps = 104/1294 (8%)
Query: 60 EAKLKDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREF 119
E +KD K KNYLF SI+++IL+TIL ETSK++W+SM+ K QG+ +V+ QLQ LRR F
Sbjct: 20 EKTVKDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSF 79
Query: 120 EVLGMKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESN 179
EVL MK GET+ YF+R + I N M+ GE + ++ +VEKILR+L EKF YVVC+IEESN
Sbjct: 80 EVLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESN 139
Query: 180 DVDTITIDQLQSSLLVQEQRMKGYREEEQALRATSSGKSERGRGRTGNRGRGRGRGSF-- 237
++ +T+D LQSSL+V EQ + + EE+ L+A + + + GRGR G+ RGRGRG +
Sbjct: 140 NIKELTVDGLQSSLMVHEQNLSRHDVEERVLKAETQWRPDGGRGRGGSPSRGRGRGGYQG 199
Query: 238 ------NKESVECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTT 291
N+++VEC+KCHK+GH++ ECP+WE+ ANY E+ ED LLLMA E
Sbjct: 200 RGRGYVNRDTVECFKCHKMGHYKAECPSWEKEANYVEMEED---LLLMAHVEQ------- 249
Query: 292 LKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKL 351
G ++K ++WFLDSGCSNHMCG+REWF LD F V+L
Sbjct: 250 ---IGDEEK------------------QIWFLDSGCSNHMCGTREWFLELDSGFKQNVRL 288
Query: 352 GDDSIMTVKGKGDVKLQIGGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRI 411
GDD M V+GKG ++L++ G IQV ++VYF+P LKNNL S+GQL ++ L + C +
Sbjct: 289 GDDRRMAVEGKGKLRLEVDGRIQVISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEV 348
Query: 412 YHK-DKGLIIQSRMSSNRMFAVIATM-----IAPTCFSTTIKDESELWHKRYGHLGYSGL 465
+HK +K +++ S M+ NRMF V A + T I + +WHKR+GHL + GL
Sbjct: 349 WHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGL 408
Query: 466 KILAQKAMVKGLPM--LGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGPI 523
+ LA+K MVKGLP LGE + C+ CLKGKQ + P++S W++ + LQL+H+DICGPI
Sbjct: 409 RSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPI 468
Query: 524 KPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRG 583
P S S KRY + FIDDF RK W YLLSEKS + FK+FK E+ESG+KL CLR+DRG
Sbjct: 469 NPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRG 528
Query: 584 GEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPE 643
GE+NSREF E+C+ GIKRQLTA+YTPQQNGV+ERKNR++MNM RCML E VPR+FWPE
Sbjct: 529 GEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPE 588
Query: 644 AVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSI 703
AV ++VYI NRSP+ A+ +ITPEE WS KPSV RIFG +AYA VP +R KLD +SI
Sbjct: 589 AVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSI 648
Query: 704 KCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESSGWDWSSGAEQMEFFDEMVDTNEVS 763
KC+ G S+ESKAYRLYDP + KI+I+RDV FDE GW+W + + E + D
Sbjct: 649 KCVMFGVSKESKAYRLYDPATGKILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAG 708
Query: 764 TVPILDEVEHQVHSETNDTSPELEDNGEASVSASPGVAEEERERRGRRNVQQPVWMKEFV 823
E+ H + +T E E E P V G R QQPVWMK++V
Sbjct: 709 EEG--PEINHNGQQDQEETEEEEETVAETVHQNLPAVG-----TGGVRQRQQPVWMKDYV 761
Query: 824 SG-------EDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSDHWRKAMDLEIQAIE 876
G +D DE ++ F+ D DP+ ++EAA+ + WRKAM+ EI +IE
Sbjct: 762 VGNARVLITQDEEDEVLALFIGPD----------DPVCFEEAAQLEVWRKAMEAEITSIE 811
Query: 877 RNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYAQQQGIDFTEVFAPV 936
NNTW+L ELP+ K IG+KW++KTK NEKGE++K KARLVAKGY Q+ G+DF EVFAPV
Sbjct: 812 ENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPV 871
Query: 937 ARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKLHK 996
A+WDTIR IL +AA +GW+VFQLDVKSAFLHG + E VFV+QP+G++V KVYKL K
Sbjct: 872 AKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKK 931
Query: 997 ALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTGNC 1056
ALYGL+QAPRAWYSRI+ +F K+GF + +HTL+VK+ E ++VS+YVDDLIYTG+
Sbjct: 932 ALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKK-ERSDFLVVSVYVDDLIYTGSS 990
Query: 1057 ELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYAKEVLERFGMKNSNP 1116
+I FK SM EF M+DLGKM YFLGVE++Q+ GIF+ Q KYA E+++++GM+ N
Sbjct: 991 MEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNS 1050
Query: 1117 VRNPVVPGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYSVSLVSRYMEKPTELH 1176
V+NP+VPG KL K G VSRYME P E H
Sbjct: 1051 VKNPIVPGQKLTKAGA--------------------------------VSRYMESPNEQH 1078
Query: 1177 VQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGSIA 1236
+ VKR++RY+ GT+D+GIQY R G+ +L+ + DSDYAGDVDDRKSTSGYVFMLG G+IA
Sbjct: 1079 LLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIA 1138
Query: 1237 WSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIKLSK 1296
W+SKKQ +V+LSTTEAEF++A ACQ +WLR +L +G Q + ++CDNSSTIKLSK
Sbjct: 1139 WASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSK 1198
Query: 1297 NPVMHGRSKHINVRYHFLRDLVRDGRIELVHCST 1330
NPV+HGRSKHI+VRYHFLR+LV++G I L +C+T
Sbjct: 1199 NPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTT 1232
>At1g48710 hypothetical protein
Length = 1352
Score = 1149 bits (2973), Expect = 0.0
Identities = 609/1369 (44%), Positives = 844/1369 (61%), Gaps = 106/1369 (7%)
Query: 7 FSQPAVPKFDGHYDHWALLMENLLRSKEYWPIVADGV--PALAPNANAEQIKIHEEAKLK 64
F P + K +YD+W+L M+ +L + + W IV G P + + Q +++ +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 65 DLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGM 124
D KA ++Q ++ E ++ ++KE W+ +R +G+ +VK+V+LQ LR EFE L M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 125 KEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESNDVDTI 184
KEGE V +YF+R L++ N +K GE + + I+EK+LRSL KF ++V IEE+ D++ +
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 185 TIDQLQSSLLVQEQRMKGY-------------REEEQALRATSSGKSERGRGRTG----- 226
TI+QL SL E++ K +EE G RGRGR G
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 227 --------------NRGRGRGRGS----FNKESVECYKCHKLGHFQYECPT-----WEES 263
N RGRG+G ++K SV+CY C K GH+ EC +EE
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 264 ANYAELHEDHEELLLMARTETGKTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFL 323
ANY E E++LLMA + K QE W+L
Sbjct: 306 ANYVEEKIQEEDMLLMASYK----------------------KDEQE------ENHKWYL 337
Query: 324 DSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGKGDVKLQI-GGLIQVFTEVYFI 382
DSG SNHMCG + F LDES V LGD+S M VKGKG++ +++ G Q + VY+I
Sbjct: 338 DSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYI 397
Query: 383 PELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCF 442
P +K N+LS+GQLLE+ I K I ++ LI + MS NRMF + C
Sbjct: 398 PSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCL 457
Query: 443 STTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQ 502
K+ES LWH R+GHL + GL++L++K MV+GLP + ++ CE CL GKQ FP+
Sbjct: 458 KMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPK 517
Query: 503 KSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKK 562
+S+ RA++ L+LIH+D+CGPIKPKS + YF+ FIDDF RKTWVY L EKS E FKK
Sbjct: 518 ESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 563 FKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRT 622
FK EKESG + +R+DRGGEF S+EF ++CE NGI+RQLT +PQQNGV+ERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 623 IMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIF 682
I+ M R ML K++P+E W EAV +VY+ NRSPT +V TP+E WSG+K V+ R+F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVF 697
Query: 683 GCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESSGWD 742
G +A+AHVPD +R KLD++S K I++G SK Y+LY+P +KK II+R++VFDE WD
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 743 WSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELEDNGEASVSASPGVAE 802
W+S E FF + DE E T + P E + S + E
Sbjct: 758 WNSNEEDYNFFPHFEE----------DEPE-----PTREEPPSEEPTTPPTSPTSSQIEE 802
Query: 803 EERERRGR-RNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKS 861
ER R R++Q+ + E + E ++ F C AE +PM + EA +
Sbjct: 803 SSSERTPRFRSIQELYEVTE-------NQENLTLF-CLFAE-------CEPMDFQEAIEK 847
Query: 862 DHWRKAMDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGY 921
WR AMD EI++I++N+TW+L LP G K+IGVKWVYK K N KGE+E++KARLVAKGY
Sbjct: 848 KTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGY 907
Query: 922 AQQQGIDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQG 981
Q+ GID+ EVFAPVAR +T+R I+++AA W + Q+DVKSAFL+G ++E V+++QPQG
Sbjct: 908 IQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 967
Query: 982 YQVRGAERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAI 1041
Y V+G E KV +L KALYGL+QAPRAW +RID YF+++ F++ +H LY+K + + +
Sbjct: 968 YIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI-L 1026
Query: 1042 IVSLYVDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKY 1101
I LYVDDLI+TGN + EFK M +EF+M+D+G MSY+LG+E+ Q GIF+ Q Y
Sbjct: 1027 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1086
Query: 1102 AKEVLERFGMKNSNPVRNPVVPGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYS 1161
AKEVL++F M +SNPV P+ G KL+K+ G VD T +K ++GSL YLT +RPD++Y+
Sbjct: 1087 AKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYA 1146
Query: 1162 VSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRK 1221
V +VSRYME PT H + KR++RY+ GTV+ G+ Y + KL+ Y+DSD+ GDVDDRK
Sbjct: 1147 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRK 1206
Query: 1222 STSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKC 1281
STSG+VF +G + W SKKQ +V LST EAE++AA SC C IWLR +L L Q +
Sbjct: 1207 STSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEP 1266
Query: 1282 STIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCST 1330
+ I+ DN S I L+KNPV H RSKHI+ RYH++R+ V ++L + T
Sbjct: 1267 TKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1315
>At3g61330 copia-type polyprotein
Length = 1352
Score = 1146 bits (2964), Expect = 0.0
Identities = 605/1371 (44%), Positives = 846/1371 (61%), Gaps = 110/1371 (8%)
Query: 7 FSQPAVPKFDGHYDHWALLMENLLRSKEYWPIVADGV--PALAPNANAEQIKIHEEAKLK 64
F P + K +YD+W+L M+ +L + + W IV G P + + Q +++ +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 65 DLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGM 124
D KA ++Q ++ E ++ ++KE W+ +R +G+ +VK+V+LQ LR EFE L M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 125 KEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESNDVDTI 184
KEGE V +YF+R L++ N +K GE + + I+EK+LRSL KF ++V IEE+ D++ +
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 185 TIDQLQSSLLVQEQRMKGY-------------REEEQALRATSSGKSERGRGRTG----- 226
TI+QL SL E++ K +EE G RGRGR G
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 227 --------------NRGRGRGRGS----FNKESVECYKCHKLGHFQYECPT-----WEES 263
N RGRG+G ++K SV+CY C K GH+ EC +EE
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 264 ANYAELHEDHEELLLMA--RTETGKTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVW 321
A+Y E E++LLMA + + K +H W
Sbjct: 306 AHYVEEKIQEEDMLLMASYKKDEQKENHK------------------------------W 335
Query: 322 FLDSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGKGDVKLQI-GGLIQVFTEVY 380
+LDSG SNHMCG + F LDES V LGD+S M VKGKG++ +++ G Q + VY
Sbjct: 336 YLDSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVY 395
Query: 381 FIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPT 440
+IP +K N+LS+GQLLE+ I K I ++ LI + MS NRMF +
Sbjct: 396 YIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQ 455
Query: 441 CFSTTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLGELDKPCEECLKGKQHIDPF 500
C K+ES LWH R+GHL + GL++L++K MV+GLP + ++ CE CL GKQ F
Sbjct: 456 CLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSF 515
Query: 501 PQKSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESF 560
P++S+ RA++ L+LIH+D+CGPIKPKS + YF+ FIDDF RKTWVY L EKS E F
Sbjct: 516 PKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIF 575
Query: 561 KKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKN 620
KKFK EKESG + +R+DRGGEF S+EF ++CE NGI+RQLT +PQQNGV ERKN
Sbjct: 576 KKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKN 635
Query: 621 RTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFR 680
RTI+ M R ML K++P+E W EAV +VY+ NRSPT +V TP+E WSG+KP V+ R
Sbjct: 636 RTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLR 695
Query: 681 IFGCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESSG 740
+FG +A+AHVPD +R KLD++S K I++G SK Y+LY+P +KK II+R++VFDE
Sbjct: 696 VFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGE 755
Query: 741 WDWSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELEDNGEASVSASPGV 800
WDW+S E FF + DE E T + P E + S +
Sbjct: 756 WDWNSNEEDYNFFPHFEE----------DEPE-----PTREEPPSEEPTTPPTSPTSSQI 800
Query: 801 AEEERERRGR-RNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAA 859
E ER R R++Q+ + E + E ++ F C AE +PM + +A
Sbjct: 801 EESSSERTPRFRSIQELYEVTE-------NQENLTLF-CLFAE-------CEPMDFQKAI 845
Query: 860 KSDHWRKAMDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAK 919
+ WR AMD EI++I++N+TW+L LP G K+IGVKWVYK K N KGE+E++KARLVAK
Sbjct: 846 EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAK 905
Query: 920 GYAQQQGIDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQP 979
GY+Q+ GID+ EVFAPVAR +T+R I+++AA W + Q+DVKSAFL+G ++E V+++QP
Sbjct: 906 GYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965
Query: 980 QGYQVRGAERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGL 1039
QGY V+G E KV +L K LYGL+QAPRAW +RID YF+++ F++ +H LY+K + +
Sbjct: 966 QGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI 1025
Query: 1040 AIIVSLYVDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQS 1099
+I LYVDDLI+TGN + EFK M +EF+M+D+G MSY+LG+E+ Q GIF+ Q
Sbjct: 1026 -LIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1084
Query: 1100 KYAKEVLERFGMKNSNPVRNPVVPGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLM 1159
YAKEVL++F + +SNPV P+ G KL+K+ G VD T +K ++GSL YLT +RPD++
Sbjct: 1085 GYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1144
Query: 1160 YSVSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDD 1219
Y+V +VSRYME PT H + KR++RY+ GTV+ G+ Y + KL+ Y+DSD+ GDVDD
Sbjct: 1145 YAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDD 1204
Query: 1220 RKSTSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQG 1279
RKSTSG+VF +G + W SKKQ +V+LST EAE++AA SC C IWLR +L L Q
Sbjct: 1205 RKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1264
Query: 1280 KCSTIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCST 1330
+ + I+ DN S I L+KNPV H RSKHI+ RYH++R+ V ++L + T
Sbjct: 1265 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1315
>At1g58140 hypothetical protein
Length = 1320
Score = 1119 bits (2894), Expect = 0.0
Identities = 594/1368 (43%), Positives = 822/1368 (59%), Gaps = 136/1368 (9%)
Query: 7 FSQPAVPKFDGHYDHWALLMENLLRSKEYWPIVADGV--PALAPNANAEQIKIHEEAKLK 64
F P + K +YD+W+L M+ +L + + W IV G P + + Q +++ +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 65 DLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGM 124
D KA ++Q ++ E ++ ++KE W+ +R +G+ +VK+V+LQ LR EFE L M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 125 KEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESNDVDTI 184
KEGE V +YF+R L++ N +K GE + + I+EK+LRSL KF ++V IEE+ D++ +
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 185 TIDQLQSSLLVQEQRMKGY-------------REEEQALRATSSGKSERGRGRTG----- 226
TI+QL SL E++ K +EE G RGRGR G
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 227 --------------NRGRGRGRGS----FNKESVECYKCHKLGHFQYECPT-----WEES 263
N RGRG+G ++K SV+CY C K GH+ EC +EE
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 264 ANYAELHEDHEELLLMARTETGKTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFL 323
ANY E E++LLMA + K QE W+L
Sbjct: 306 ANYVEEKIQEEDMLLMASYK----------------------KDEQE------ENHKWYL 337
Query: 324 DSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGKGDVKLQI-GGLIQVFTEVYFI 382
DSG SNHMCG + F LDES V LGD+S M VKGKG++ +++ G Q + VY+I
Sbjct: 338 DSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYI 397
Query: 383 PELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCF 442
P +K N+LS+GQLLE+ I K I ++ LI + MS NRMF + C
Sbjct: 398 PSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCL 457
Query: 443 STTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQ 502
K+ES LWH R+GHL + GL++L++K MV+GLP + ++ CE CL GKQ FP+
Sbjct: 458 KMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPK 517
Query: 503 KSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKK 562
+S+ RA++ L+LIH+D+CGPIKPKS + YF+ FIDDF RKTWVY L EKS E FKK
Sbjct: 518 ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 563 FKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRT 622
FK EKESG + +R+DRGGEF S+EF ++CE NGI+RQLT +PQQNGV+ERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 623 IMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIF 682
I+ M R ML K++P+E W EAV +VY+ NRSPT +V TP+E WSG+KP V+ R+F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 683 GCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESSGWD 742
G +A+AHVPD +R KLD++S K I++G SK Y+LY+P +KK II+R++VFDE WD
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 743 WSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELEDNGEASVSASPGVAE 802
W+S E FF + T + SE T P + + P +
Sbjct: 758 WNSNEEDYNFFPHFEEDKPEPT-------REEPPSEEPTTPPTSPTSSQIEEKCEPMDFQ 810
Query: 803 EERERRGRRNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSD 862
E E++ RN DE KS
Sbjct: 811 EAIEKKTWRNAM-----------------------------------------DEEIKS- 828
Query: 863 HWRKAMDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYA 922
I++N+TW+L LP G K+IGVKWVYK K N KGE+E++KARLVAKGY+
Sbjct: 829 ------------IQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYS 876
Query: 923 QQQGIDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGY 982
Q+ GID+ EVFAPVAR +T+R I+++AA W + Q+DVKSAFL+G ++E V+++QPQGY
Sbjct: 877 QRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 936
Query: 983 QVRGAERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAII 1042
V+G E KV +L KALYGL+QAPRAW +RID YF+++ F++ +H LY+K + + +I
Sbjct: 937 IVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI-LI 995
Query: 1043 VSLYVDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYA 1102
LYVDDLI+TGN + EFK M +EF+M+D+G MSY+LG+E+ Q GIF+ Q YA
Sbjct: 996 ACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYA 1055
Query: 1103 KEVLERFGMKNSNPVRNPVVPGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYSV 1162
KEVL++F M +SNPV P+ G KL+K+ G VD T +K ++GSL YLT +RPD++Y+V
Sbjct: 1056 KEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAV 1115
Query: 1163 SLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKS 1222
+VSRYME PT H + KR++RY+ GTV+ G+ Y + KL+ Y+DSD+ GDVDDRKS
Sbjct: 1116 GVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKS 1175
Query: 1223 TSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCS 1282
TSG+VF +G + W SKKQ +V+LST EAE++AA SC C IWLR +L L Q + +
Sbjct: 1176 TSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPT 1235
Query: 1283 TIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCST 1330
I+ DN S I L+KNPV H RSKHI+ RYH++R+ V ++L + T
Sbjct: 1236 KIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1283
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 1016 bits (2626), Expect = 0.0
Identities = 563/1369 (41%), Positives = 786/1369 (57%), Gaps = 186/1369 (13%)
Query: 7 FSQPAVPKFDGHYDHWALLMENLLRSKEYWPIVADGV--PALAPNANAEQIKIHEEAKLK 64
F P + K +YD+W+L M+ +L + + W IV G P + + Q +++ +
Sbjct: 8 FQVPVLTK--SNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKR 65
Query: 65 DLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGM 124
D KA ++Q ++ E ++ ++KE W+ +R +G+ +VK+V+LQ LR EFE L M
Sbjct: 66 DKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQM 125
Query: 125 KEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESNDVDTI 184
KEGE V +YF+R L++ N +K GE + + I+EK+LRSL KF ++V IEE+ D++ +
Sbjct: 126 KEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAM 185
Query: 185 TIDQLQSSLLVQEQRMKGY-------------REEEQALRATSSGKSERGRGRTG----- 226
TI+QL SL E++ K +EE G RGRGR G
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 227 --------------NRGRGRGRGS----FNKESVECYKCHKLGHFQYECPT-----WEES 263
N RGRG+G ++K SV+CY C K GH+ EC ++E
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFKEK 305
Query: 264 ANYAELHEDHEELLLMARTETGKTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFL 323
ANY E E++LLMA + K QE W+L
Sbjct: 306 ANYVEEKIQEEDMLLMASYK----------------------KDEQE------ENHKWYL 337
Query: 324 DSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGKGDVKLQI-GGLIQVFTEVYFI 382
DSG SNHMCG + F LDES V LGD+S M VKGKG++ +++ G Q + VY+I
Sbjct: 338 DSGASNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYI 397
Query: 383 PELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCF 442
P +K N+LS+GQLLE+ I K I K+ LI + MS NRMF + C
Sbjct: 398 PSMKTNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDIAQCL 457
Query: 443 STTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQ 502
K+ES LWH R+GHL + GL++L++K MV+GLP + ++ CE CL G Q FP+
Sbjct: 458 KMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPK 517
Query: 503 KSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKK 562
+S+ RA++ L+LIH+D+CGPIKPKS + YF+ FIDDF RKTWVY L EKS E FKK
Sbjct: 518 ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 563 FKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRT 622
FK EKESG + +R+D GGEF S+EF ++CE NGI+RQLT +PQQNGV+ERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 623 IMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIF 682
I+ M R ML K++P+E W EAV +VY+ NRSPT +V TP+E WSG+KP V+ R+F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 683 GCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESSGWD 742
G +A+AHVPD +R KLD++S K I++G SK Y+LY+P +KK II+R++VFDE WD
Sbjct: 698 GSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 743 WSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELEDNGEASVSASPGVAE 802
W+S E FF E T + P E + S + E
Sbjct: 758 WNSNEEDYNFFPHF---------------EEDKPEPTREEPPSEEPTTPPTSPTSSQIEE 802
Query: 803 EERERRGR-RNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKS 861
ER R R++Q+ + E + E ++ F C AE +PM + EA +
Sbjct: 803 SSSERTPRFRSIQELYEVTE-------NQENLTLF-CLFAE-------CEPMDFQEAIEK 847
Query: 862 DHWRKAMDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGY 921
WR AMD EI++I++N+TW+L LP G K+IGVKWVYK K N KGE+E++KARLVAKGY
Sbjct: 848 KTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGY 907
Query: 922 AQQQGIDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQG 981
+Q+ GID+ E+FAPVAR +T+R I+++AA W + Q+DVKSAFL+G ++E V+++QPQG
Sbjct: 908 SQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQG 967
Query: 982 YQVRGAERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAI 1041
Y V+G E KV +L K LYGL+QAPRAW +RID YF+++ F++ +H LY+K + + +
Sbjct: 968 YIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDI-L 1026
Query: 1042 IVSLYVDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKY 1101
I LYVDDLI+TGN + EFK M +EF+M+D+G MSY+LG+E+ Q GIF+ Q Y
Sbjct: 1027 IACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGY 1086
Query: 1102 AKEVLERFGMKNSNPVRNPVVPGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYS 1161
AKEVL++F M +SNP ++GSL YLT +RPD++Y+
Sbjct: 1087 AKEVLKKFKMDDSNP--------------------------SLVGSLRYLTCTRPDILYA 1120
Query: 1162 VSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRK 1221
V +VSRYME PT H + KR++RY+ GTV+ G+ Y T SDY
Sbjct: 1121 VGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYS----------TTSDY-------- 1162
Query: 1222 STSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKC 1281
+ VV C IWLR +L L Q +
Sbjct: 1163 --------------------KLVV----------------CHAIWLRNLLKELSLPQEEP 1186
Query: 1282 STIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCST 1330
+ I+ DN S I L+KNPV H RSKHI+ RYH++R+ V ++L + T
Sbjct: 1187 TKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKT 1235
>At3g25450 hypothetical protein
Length = 1343
Score = 939 bits (2427), Expect = 0.0
Identities = 525/1340 (39%), Positives = 770/1340 (57%), Gaps = 104/1340 (7%)
Query: 18 HYDHWALLMENLLRSKEYWPIVADGVPALAPNANAEQIKIHEEAKLKDLKAKNYLFQSIE 77
+Y W + ME +LR + W + G +A+ E K+ A+ LFQSI
Sbjct: 29 NYTVWTMRMEAVLRVHKLWGTIEPG------SADEE----------KNDMARALLFQSIP 72
Query: 78 RSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGMKEGETVVNYFART 137
S++ + +TS +W++++ +N G+ +VK +LQ L EF+ L MK+ ET+ +Y R
Sbjct: 73 ESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKLKMKDSETIDDYVGRI 132
Query: 138 LSIVNKMKIQGESIKETLIVEKILRSLT-EKFNYVVCSIEESNDVDTITIDQLQSSLLVQ 196
I K GE I+E+ IV+K L+SL +K+ ++V ++E+ D+ T T + +
Sbjct: 133 SEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDLKTTTFEDIAG----- 187
Query: 197 EQRMKGYREEEQALRATSSGKSERGRGRTGNRGRGRGRGSFNKESVECY------KCH-- 248
R+K Y + R S +G+ +E E K H
Sbjct: 188 --RIKTYED-----RVWDDDDSHEDQGKLMTEVEEEVVDDLEEEEEEVINKEIKAKSHVI 240
Query: 249 ----KLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTTLKIQGVDKKSLLM 304
KL Q + E+ + AE HE + L + +
Sbjct: 241 DRLLKLIRLQEQKEKEEDDTHEAESLMMHEVVYLNEKN---------------------I 279
Query: 305 AKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGKGD 364
T E C W+LD+G SNHM G+R WF LDE T V+ GDDS + +KGKG
Sbjct: 280 RPTELESCI----NNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGS 335
Query: 365 VK-LQIGGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQSR 423
+ + GG ++ +VY+IP+LK+N+LS+GQ E I ++ + ++ ++ L+I+++
Sbjct: 336 IPFISKGGERKILFDVYYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQ 395
Query: 424 MSSNRMFAVIATMIAPTCFSTTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLGEL 483
S NR++ V + C T +ES +WH R GH+ + +K + +K +V G+
Sbjct: 396 RSRNRLYKVSLEVENSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQ 455
Query: 484 DKP-CEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDFC 542
+K C CL GKQ FP+ +++RA + L+LIH D+CGPI P + ++KRY IDD
Sbjct: 456 EKETCGSCLFGKQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHS 515
Query: 543 RKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIKR 602
R W LL EKS A FK+FK L E+E G + RTDRGGEF S EF EFC GI R
Sbjct: 516 RYMWSILLKEKSEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINR 575
Query: 603 QLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVKN 662
LTA YTPQQNGV ER+NRT++ M R +L +P W EAV S Y+ NR T ++ N
Sbjct: 576 HLTAPYTPQQNGVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSN 635
Query: 663 ITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYDP 722
TP E + KKP+V R+FGCV+YA V +KLD+RS +YLG+ SKAYRL DP
Sbjct: 636 QTPYEVFKHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDP 695
Query: 723 VSKKIIINRDVVFDESSGWDWSSGAEQM------------EFFDEMVDTNEVSTVPILDE 770
++I ++RDVVFDE+ W W + + EF + V N++ST P E
Sbjct: 696 TKRRIFVSRDVVFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETE 755
Query: 771 VEHQVHSETNDTSPELEDNGEASVSASPGVAEEERERRGRRNVQQPVWMKEFVSGEDLSD 830
E +++ E + E E P + RR +R V +P ++K++V
Sbjct: 756 -EAEINGEDENIIEEAETEEHDQSQEEP-----QPVRRSQRQVIRPNYLKDYV------- 802
Query: 831 EGVSNFVCAD--AEYSFVSIHSDPMTYDEAAKSDHWRKAMDLEIQAIERNNTWQLAELPK 888
+CA+ AE+ ++++ +P + EA KS WR A EIQ+IE+N TW L +LP
Sbjct: 803 ------LCAEIEAEHLLLAVNDEPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPV 856
Query: 889 GDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYAQQQGIDFTEVFAPVARWDTIRTILAI 948
G K+IGVKWV+K K N G I K+KARLVAKGY Q+ G+DF EVFAPVAR +T+R I+A+
Sbjct: 857 GSKAIGVKWVFKLKHNSDGSINKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIAL 916
Query: 949 AAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKLHKALYGLRQAPRAW 1008
AA GW + LDVK+AFLHG++ E V+V QP+G+ + ++ KVYKLHKALYGLRQAPRAW
Sbjct: 917 AASNGWEIHHLDVKTAFLHGELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAW 976
Query: 1009 YSRIDSYFQKQGFVRSDSDHTLYVKQ-GENGLAIIVSLYVDDLIYTGNCELLISEFKASM 1067
++++ ++ F + + +LY KQ GEN ++V++YVDDL+ TG+ +I FK M
Sbjct: 977 NTKLNEILKELKFEKCHKEPSLYRKQEGEN--ILVVAVYVDDLLVTGSNLDIILNFKKGM 1034
Query: 1068 EREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYAKEVLERFGMKNSNPVRNPVVPGTKL 1127
+F+MSDLGK++Y+LG+E+LQ+ +GI + Q +YAK++LE GM N V P++ +L
Sbjct: 1035 VGKFEMSDLGKLTYYLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLEL 1094
Query: 1128 NKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYSVSLVSRYMEKPTELHVQIVKRVMRYL 1187
+K +D T Y++ IG L YL +RPDL Y+V ++SRY+++P E H +K+++RYL
Sbjct: 1095 SKAQDEKRIDETDYRRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYL 1154
Query: 1188 NGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGSIAWSSKKQAVVSL 1247
GT G+ +++ + LI Y+DS + D+DD KST G++F L I W S+KQ VV+L
Sbjct: 1155 QGTTSHGLYFKKGENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTL 1214
Query: 1248 STTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIKLSKNPVMHGRSKHI 1307
S+ EAEF+AA A Q IWL+ +L + + + TI DN S I L+KNPV HGRSKHI
Sbjct: 1215 SSCEAEFMAATEAAKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHI 1274
Query: 1308 NVRYHFLRDLVRDGRIELVH 1327
+ RYHF+R+ V +G+IE+ H
Sbjct: 1275 HRRYHFIRECVENGQIEVEH 1294
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 918 bits (2373), Expect = 0.0
Identities = 505/1367 (36%), Positives = 779/1367 (56%), Gaps = 97/1367 (7%)
Query: 8 SQPAVPKFDGH-YDHWALLMENLLRSKEYWPIVADGVPALAPNAN-----AEQIKIHEEA 61
S +P FDG YD W++ M + R+++ W +V +GVP A A + EEA
Sbjct: 5 SHQVIPIFDGEKYDFWSIKMATIFRTRKLWSVVEEGVPVEPVQAEETPETARAKTLREEA 64
Query: 62 KLKDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEV 121
D A L ++ I I +SKE WD ++ + QGS +V+ V+LQ+LRRE+E
Sbjct: 65 VTNDTMALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYEN 124
Query: 122 LGMKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESNDV 181
L M + + + + + + + ++ GE T +++KIL SL KF+ +V +E++ D+
Sbjct: 125 LKMYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDL 184
Query: 182 DTITIDQLQSSLLVQEQRMKGYRE--EEQALRATSSGKSERG--RGRTGNR--------- 228
D +T+ +L L QE R+ E +E A S G+ E G + T NR
Sbjct: 185 DALTMSELLGILKAQEARVTAREESTKEGAFYVRSKGR-ESGFKQDNTNNRVNQDKKWCG 243
Query: 229 ---------------GRGRGRGSFNKESVECYKCHKLGHFQYECPTWEESANYAELHEDH 273
+ G + +++CYKC K+GH+ EC
Sbjct: 244 FHKSSKHTEEECREKPKNDDHGKNKRSNIKCYKCGKIGHYANEC---------------- 287
Query: 274 EELLLMARTETGKTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCG 333
R++ + +H TL+ + V++ +L + + +E S VW +DSGC+NHM
Sbjct: 288 -------RSKNKERAHVTLEEEDVNEDHMLFSASEEE--STTLREDVWLVDSGCTNHMTK 338
Query: 334 SREWFHNLDESFTTTVKLGDDSIMTVKGKGDVKLQIGGLIQVFTEVYFIPELKNNLLSIG 393
+F N+++S +++ + I+ GKGD+ + ++ V+ +P L+ NLLS+
Sbjct: 339 EERYFSNINKSIKVPIRVRNGDIVMTAGKGDITVMTRHGKRIIKNVFLVPGLEKNLLSVP 398
Query: 394 QLLERDLSITFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCFSTTIKDESELW 453
Q++ + F+ K C I + I+ M+ ++ F + + + + ++ E E W
Sbjct: 399 QIISSGYWVRFQDKRCIIQDANGKEIMNIEMT-DKSFKIKLSSVEEEAMTANVQTE-ETW 456
Query: 454 HKRYGHLGYSGLKILAQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQ 513
HKR GH+ L+ + K +V GLP + C+ C GKQ FP++S + KL+
Sbjct: 457 HKRLGHVSNKRLQQMQDKELVNGLPRFKVTKETCKACNLGKQSRKSFPKESQTKTREKLE 516
Query: 514 LIHSDICGPIKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGE 573
++H+D+CGP++ +S RY++ F+DD+ WVY L +KS +FKKFK L EK+S
Sbjct: 517 IVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNC 576
Query: 574 KLSCLRTDRGGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTE 633
+ LR FCE GI RQ+T Y+PQQNG +ERKNR+++ M R ML E
Sbjct: 577 SIKTLRP----------MEVFCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVE 626
Query: 634 KKVPREFWPEAVNWSVYIQNRSPTIAVKN-ITPEECWSGKKPSVNFFRIFGCVAYAHVPD 692
+ +P + W EAV S Y+QNR P+ A+++ +TP E W G KP+V+ RIFG + Y H+PD
Sbjct: 627 QDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPD 686
Query: 693 SQRRKLDNRSIKCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESSGWDWSSGAEQMEF 752
+RRKLD ++ I +G S ++K YR++ +K+ ++RDVVF E WDW E +
Sbjct: 687 QKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKT 746
Query: 753 FDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELED---NGEASVSASPGVAEEERERRG 809
F V ++ + E Q + ++D S +++D NGE S+ V + ++
Sbjct: 747 F--------VMSINDIQESRDQQETSSHDLS-QIDDHANNGEGETSSH--VLSQVNDQEE 795
Query: 810 RRNVQQPVWMKEFVSGEDLSDEG--VSNFVCADAEYSFVSIHSDPMTYDEAAKSDHWRKA 867
R + P K++ S +++ ++ + N A + + + +P TYDEA W +A
Sbjct: 796 RETSESP---KKYKSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDEARGDKEWEEA 852
Query: 868 MDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYAQQQGI 927
M+ EI+ IE+N TW+L + P+ I VKW+YK K + G KHKARLVA+G++Q+ GI
Sbjct: 853 MNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYGI 912
Query: 928 DFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGA 987
D+ E FAPV+R+DTIR +LA AA W ++Q+DVKSAFL+G+++E V+V QP G+ + G
Sbjct: 913 DYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGK 972
Query: 988 ERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLY-VKQGENGLAIIVSLY 1046
E KV +L+KALYGL+QAPRAWY RIDSYF + GF RS +D LY K+GE+ +IVSLY
Sbjct: 973 EEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGED--VLIVSLY 1030
Query: 1047 VDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYAKEVL 1106
VDDLI TGN LI+ FK +M+ EF+M+DLG ++YFLG+E+ Q+ GIF+ Q KYA +++
Sbjct: 1031 VDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEVNQDDSGIFLSQEKYANKLI 1090
Query: 1107 ERFGMKNSNPVRNPVVP-GTKLNKRGCGSE-VDATQYKQMIGSLMYLTVSRPDLMYSVSL 1164
++FGMK S V P+ P G + G E D T+Y++++G L+YL SRPD+MY+ S
Sbjct: 1091 DKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTKYRRIVGGLLYLCASRPDVMYASSY 1150
Query: 1165 VSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTS 1224
+SRYM P+ H Q KRV+RY+ GT + G+ + + +L+ Y+DSD+ G ++D+KST+
Sbjct: 1151 LSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGGSLEDKKSTT 1210
Query: 1225 GYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTI 1284
GYVF LG W S KQ V+ ST EAE+IA + Q IWL+R+ G + I
Sbjct: 1211 GYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFGLKFKEGIPI 1270
Query: 1285 YCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCSTE 1331
CDN S I + +NPV H R+KHI ++YHF+R+ G I+L +C E
Sbjct: 1271 LCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQLEYCKGE 1317
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 876 bits (2263), Expect = 0.0
Identities = 499/1297 (38%), Positives = 740/1297 (56%), Gaps = 97/1297 (7%)
Query: 64 KDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLG 123
K+ A+ LFQS+ S + + +TSK +W++++ +N G+ +VK +LQ L EF+ L
Sbjct: 23 KNDMARALLFQSVPESTILQVGKHKTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLN 82
Query: 124 MKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLT-EKFNYVVCSIEESNDVD 182
MK+ ET+ + R I K + GE I+E+ IV+K L+SL +K+ +++ ++E+ D++
Sbjct: 83 MKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLN 142
Query: 183 TITIDQLQSSLLVQEQRM--KGYREEEQA----LRATSSGKSERGRGRTGNRGRGRGRGS 236
T + + + E R+ + EEQ + SS + GRGR R GRGRG
Sbjct: 143 TTGFEDIVGRMKTYEDRVCDEDDSPEEQGKLMYANSESSYDTRGGRGRGRGRSSGRGRGG 202
Query: 237 F-----NKESVECYKCHKLGHFQYEC--------PTWEESANYAELHEDHEELLLMARTE 283
+ +K V CY+C K GH+ EC E+ N +ED +E+ + E
Sbjct: 203 YGYQQRDKSKVICYRCDKTGHYASECLDRLLKLIKAQEQQQN----NEDDDEIESLMMHE 258
Query: 284 TGKTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDE 343
+ ++K + E CS W+LD+G SNHM G+ +WF L+E
Sbjct: 259 VVYLNERSVKPKEF------------EACS----DNSWYLDNGASNHMTGNLQWFSKLNE 302
Query: 344 SFTTTVKLGDDSIMTVKGKGDVKLQI-GGLIQVFTEVYFIPELKNNLLSIGQLLERDLSI 402
T V+ GDDS + +KGKG + L GG+ + T+VYFIP+LK+N++S+GQ E +
Sbjct: 303 MITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTDVYFIPDLKSNIISLGQATEAGCDV 362
Query: 403 TFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCFSTTIKDESELWHKRYGHLGY 462
K ++ ++ L++++ S NR++ V + C
Sbjct: 363 RMKDDQLTLHDREGCLLLRATRSRNRLYKVDLNVENVKCLQLEAAT-------------- 408
Query: 463 SGLKILAQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGP 522
+ +K +V G+ + + + C CL GKQ PFP+ +T+RA + L+L+H D+CGP
Sbjct: 409 -----MVRKELVIGISNIPKEKETCGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGP 463
Query: 523 IKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDR 582
I + ++KRY + IDD R W LL EKS A E F+ FK E+ESG K+ RTD+
Sbjct: 464 ITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDK 523
Query: 583 GGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWP 642
GGEF S+EF +FC GI R LTA YTPQQNGV ER+NRT++ M R +L K+P W
Sbjct: 524 GGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWG 583
Query: 643 EAVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRS 702
EAV S YI NR T +++N TP E + +KP+V R+FGC+ YA + RKLD+RS
Sbjct: 584 EAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRS 643
Query: 703 IKCIYLGSSEESKAYRLYDPVSKKII--INRDVVFDESSGWDWSSGAEQMEFFDEMVDTN 760
+YLG+ SKAYRL DP ++KII N D + SG + EF + + +
Sbjct: 644 KMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSDSETRDISG---TFSLTLGEFGNNGIQES 700
Query: 761 EVSTVPILDEVEHQVHSETNDTSPELEDNGEASVSASPGVAEEERE----------RRGR 810
D++E + + E ++ S E+ GE + + EE + RR
Sbjct: 701 --------DDIETEKNGEESENSH--EEEGENEHNEQEQIDAEETQPSHATPLPTLRRST 750
Query: 811 RNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSDHWRKAMDL 870
R V +P ++ ++V ++ E V ++I+ +P + EA K WR A
Sbjct: 751 RQVGKPNYLDDYVLMAEIEGEQV-----------LLAINDEPWDFKEANKLKEWRDACKE 799
Query: 871 EIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYAQQQGIDFT 930
EI +IE+N TW L +LP K IG+KWV+K K N G I K+KARLVAKGY Q+ GID+
Sbjct: 800 EILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHGIDYD 859
Query: 931 EVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERK 990
EVFA VAR +TIR I+A+AA GW V LDVK+AFLHG++ E V+V QP+G+ + E K
Sbjct: 860 EVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGK 919
Query: 991 VYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDL 1050
VYKLHKALYGL+QAPRAW ++++ Q+ FV+ + ++Y +Q E L +IV++YVDDL
Sbjct: 920 VYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKL-LIVAIYVDDL 978
Query: 1051 IYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYAKEVLERFG 1110
+ TG+ LI FK M +F+MSDLG+++Y+LG+E+L GI + Q +YA +++E G
Sbjct: 979 LVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGIILRQERYAMKIIEEAG 1038
Query: 1111 MKNSNPVRNPVVPGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYSVSLVSRYME 1170
M N NPV P+ G +L K + Y++MIG L Y+ +RPDL Y V ++SRY++
Sbjct: 1039 MSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVHTRPDLSYCVGVLSRYLQ 1098
Query: 1171 KPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFML 1230
+P E H +K+V+RYL GT+ G+ +R L+ Y+DS ++ D+DD KST+G++F L
Sbjct: 1099 QPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSADLDDGKSTAGHIFYL 1158
Query: 1231 GSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSS 1290
I W S+KQ VV+LS+ EAEF+AA A Q IWL+ + + + I DN S
Sbjct: 1159 HQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDNKS 1218
Query: 1291 TIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVH 1327
I L+KN V HGRSKHI+ RYHF+R+ V + +E+ H
Sbjct: 1219 AIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDH 1255
>At2g05960 putative retroelement pol polyprotein
Length = 1200
Score = 745 bits (1923), Expect = 0.0
Identities = 448/1283 (34%), Positives = 657/1283 (50%), Gaps = 200/1283 (15%)
Query: 79 SILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGMKEGETVVNYFARTL 138
S++ + ++TSK +WD ++ +N G+ +VK +L+ L EF+ L MK+ ET+ R
Sbjct: 32 SLILQVGKLKTSKAVWDKIQSRNLGAERVKEAKLKTLMAEFDKLKMKDNETIDECAGRLS 91
Query: 139 SIVNKMKIQGESIKETLIVEKILRSL-TEKFNYVVCSIEESNDVDTITIDQLQSSLLVQE 197
I K GE I+ET +V+K L+SL T+K+ ++V ++E+ D+ T + + E
Sbjct: 92 EISTKSTSLGEDIEETKVVKKFLKSLPTKKYIHIVAALEQVLDLKNTTFKDIVGRIKTYE 151
Query: 198 QR-------MKGYREEEQALRATSSGKSERGRGRTGNRGRGRGRGSFNKESVECYKCHKL 250
+ +K EEE+ + E ++E +
Sbjct: 152 DKIWVLITCLKKEAEEEEKSVVGVEAEEEL---------------VISREITLRLLVIAV 196
Query: 251 GHFQYECPT-------WEESANYAELHEDHE-ELLLMARTETGKTSHTTLKIQGVDKKSL 302
++ CP +E AE +D E E L+M + L+I
Sbjct: 197 INYASNCPDRLLKLIKLQERQQEAEDDDDDEVESLMMHEVVYLNEGNMNLEIY------- 249
Query: 303 LMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGK 362
E CS K W+LD+G SNHM G+R+WF LDE T VK GDDS + ++GK
Sbjct: 250 -------EACS----DKAWYLDNGASNHMTGNRDWFCKLDEMVTGKVKFGDDSRIDIRGK 298
Query: 363 GDVK-LQIGGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQ 421
G + L G + VY+IP+LK+N++S+GQ E + K + ++ +D L+++
Sbjct: 299 GSILFLTKNGEPKTLANVYYIPDLKSNIISLGQATEAGCDVRLKDNYLTLHDRDGNLLVK 358
Query: 422 SRMSSNRMFAVIATMIAPTCFSTTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLG 481
+ S NR++ V + C ++ WH R GH+ +K + K V G+P
Sbjct: 359 ATRSRNRLYRVELKVKNTKCLQLAALNDLTKWHARLGHINLETIKAMVTKEFVIGIPSAP 418
Query: 482 ELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDF 541
+ + C C+ GKQ FP+ +T+RA + L+LIH D+CGPI P + +++RY + IDD
Sbjct: 419 KEKEICASCMLGKQARQVFPKATTYRASQILELIHGDLCGPISPPTAAKRRYILVLIDDH 478
Query: 542 CRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIK 601
R W +LL EKS A FK FK E+E+GEK+ LRTDRGGEF S+EF FCE GI
Sbjct: 479 SRFMWSFLLKEKSEAFGKFKTFKATVEQETGEKIKTLRTDRGGEFLSQEFQTFCEEEGII 538
Query: 602 RQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVK 661
R LTA YTPQQNGV ER+NRT++ M R ++ VP W EA+ + Y+ NR T A+
Sbjct: 539 RHLTAPYTPQQNGVVERRNRTLLGMTRSIMKHMSVPNYLWGEAIRHATYLINRVGTRALI 598
Query: 662 NITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYD 721
N TP E KKP+V R+FGCV+YA V RKLD RS +YLG+ SKAY L D
Sbjct: 599 NQTPYEALKKKKPNVEHLRVFGCVSYAKVEFPHLRKLDERSRILVYLGTETGSKAYTLLD 658
Query: 722 PVSKKIIINRDVVFDESSGWDWSSGAEQMEFFDEMVDTNEVSTVPILDEVE-HQVHSETN 780
P ++KII++RDVVFDE+ W W++ E+++ + + L + E H N
Sbjct: 659 PTTRKIIVSRDVVFDENKSWKWAN--------SELIEIQKEPGMFTLAQTEFHNNEEVEN 710
Query: 781 DTSPELEDNGEASVSAS---------PGVAEEERE------RRGRRNVQQPVWMKEFVSG 825
+TS E+E+N EA S + P V E R R V +P + ++V
Sbjct: 711 ETSEEIEEN-EAEDSTNKDAEDGLDEPSVPEPNHSDDVPVFTRSGRQVIKPAHLNDYVLL 769
Query: 826 EDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSDHWRKAMDLEIQAIERNNTWQLAE 885
++ + E + I+ +P + EA K WR A D EI++I +N TW L
Sbjct: 770 AEI-----------EGERLLLLINDEPWDFKEANKYREWRDACDEEIKSIIKNRTWSLVS 818
Query: 886 LPKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYAQQQGIDFTEVFAPVARWDTIRTI 945
LP G K IG+KWV+K K N G I KHKARLVAKGY Q+ +DF EVFAPVAR +T+R I
Sbjct: 819 LPVGIKPIGLKWVFKIKRNSDGNITKHKARLVAKGYVQKHVVDFDEVFAPVARIETVRFI 878
Query: 946 LAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKLHKALYGLRQAP 1005
+A+AA GW V LDVK+AFLHG++ E V+V QP+G+ +G+E KVYKLHKALY
Sbjct: 879 IALAASNGWEVHHLDVKTAFLHGELKENVYVTQPEGFVTKGSEEKVYKLHKALY------ 932
Query: 1006 RAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTGNCELLISEFKA 1065
+YVDDL+ TG+ LI +FK
Sbjct: 933 ---------------------------------------VYVDDLLVTGSSPKLIDDFKK 953
Query: 1066 SMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYAKEVLERFGMKNSNPVRNPVVPGT 1125
M + F+MSDLG+++Y+LG+E+ Q +GI + Q +YAK++LE G+ + P+ G
Sbjct: 954 GMSKNFEMSDLGRLTYYLGIEVTQEEDGIILKQERYAKKILEEAGINECKSILVPMNSGL 1013
Query: 1126 KLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYSVSLVSRYMEKPTELHVQIVKRVMR 1185
+L+K +D QY++ IG L RYM+ P E H +K+V+R
Sbjct: 1014 ELSKALDEKSIDGQQYRRSIGCL------------------RYMQDPRESHGAALKQVLR 1055
Query: 1186 YLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGSIAWSSKKQAVV 1245
YL GT G+ +++ L+ Y+D+ ++ D DD
Sbjct: 1056 YLQGTTGYGLVFKKGDKTGLVGYSDASHSVDADD-------------------------- 1089
Query: 1246 SLSTTEAEFIA-AVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIKLSKNPVMHGRS 1304
+ +A + C+ + LR DN S I L+KNPV HGRS
Sbjct: 1090 -------DLLAEVIGTPCERVTLR-----------------VDNKSAIALTKNPVFHGRS 1125
Query: 1305 KHINVRYHFLRDLVRDGRIELVH 1327
KHI+ +YHF+R+ V +G++ + H
Sbjct: 1126 KHIHRKYHFIRECVENGQVSVEH 1148
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 677 bits (1747), Expect = 0.0
Identities = 445/1365 (32%), Positives = 710/1365 (51%), Gaps = 105/1365 (7%)
Query: 12 VPKFDGHYDHWALLMENLLR-----------SKEYWPIVADGVPALAPNANAEQ----IK 56
V KFDG D+ L E LL +E +V D ++ N + K
Sbjct: 8 VEKFDGDGDY-ILWKEKLLAHMEMLGLLEGLGEEEEAVVEDSTTEISDGGNQDPETATSK 66
Query: 57 IHEEA-KLKDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQAL 115
+ ++ K K KA++ + S+ ++L ++ +T+ + + + R+ L+
Sbjct: 67 LEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPNRIYLKQR 126
Query: 116 RREFEVLGMKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSI 175
+++ E VN F + +S + +K+ + ++ +L SL +F+ + ++
Sbjct: 127 LYGYKMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIV---LLMSLPRQFDQLKETL 183
Query: 176 EESND---VDTITIDQLQSSLLVQEQRMKGYREEEQALRATSSGKSE-RGRGRTGNRGRG 231
+ ++ IT ++S +L K + L G+SE RG+G N+ R
Sbjct: 184 KYCKTTLHLEEIT-SAIRSKILELGASGKLLKNNSDGLFVQDRGRSETRGKGPNKNKSRS 242
Query: 232 RGRGSFNKESVECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTT 291
+ +G+ C+ C K GHF+ +C W+E + +E G+ S T
Sbjct: 243 KSKGA----GKTCWICGKEGHFKKQCYVWKERNKQG------------STSERGEASTVT 286
Query: 292 LKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKL 351
++ D +L++++ + W LD+GCS HM ++W + E+ + V++
Sbjct: 287 ARV--TDAAALVVSRALLGFAE--VTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRM 342
Query: 352 GDDSIMTVKGKGDVKLQI-GGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCR 410
G+D+ VKG GDV+++ G + T+V +IPE+ NL+S+G L ++ KK
Sbjct: 343 GNDTYSEVKGIGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILT 402
Query: 411 IYHKDKGLIIQSRMSSNRMFAVIATMIAPTCFSTTIKDESELWHKRYGHLGYSGLKILAQ 470
I+ D ++ + S F T+ KDE+ LWH R GH+G GL++L
Sbjct: 403 IFKNDL-TVLTGKKESTLYFLQGTTLAGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVS 461
Query: 471 KAMVKGLPMLGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGPIK-PKSNS 529
K G LDK +H+ + KL +HSD+ G P S
Sbjct: 462 K---------GHLDKNIMISFGAAKHV----------TKDKLDYVHSDLWGSTNVPFSIG 502
Query: 530 QKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSR 589
+ +YFITFIDDF R+TW+Y + K A F ++K E + +KL L TD G EF ++
Sbjct: 503 KCQYFITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQ 562
Query: 590 EFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSV 649
EF FC G+ R T +YTPQQNGV+ER NRTIMN VRCML+E + ++FW EA + +V
Sbjct: 563 EFDSFCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAV 622
Query: 650 YIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIYLG 709
++ N+SP+ +++ PEE W+G P + FG VAY H S + KL+ R+ K I+LG
Sbjct: 623 FLINKSPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIH---SDQGKLNPRAKKGIFLG 679
Query: 710 SSEESKAYRLYDPVSKKIIINRDVVFDESSGWDWSSGAEQMEFFDEMVDTNEVSTVPILD 769
+ K ++++ +K +++RD+VF E+ + + E ++ +
Sbjct: 680 YPDGVKRFKVWLLEDRKCVVSRDIVFQENQMYKELQKNDMSEEDKQLTEVERTLIELKNL 739
Query: 770 EVEHQVHSETNDTSPELEDNGEASVSASPGVAEEERE-----------RRGRRNVQQPVW 818
+ + SE D S + + + S S V E + + R RR ++ P
Sbjct: 740 SADDENQSEGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAP-- 797
Query: 819 MKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKS---DHWRKAMDLEIQAI 875
+ FV ED S G + + D E +P TY+EA +S + W++A E+ ++
Sbjct: 798 -QRFVE-EDDSLVGFALTMTEDGEV------YEPETYEEAMRSPECEKWKQATIEEMDSM 849
Query: 876 ERNNTWQLAELPKGDKSIGVKWVYKTKLNEKG-EIEKHKARLVAKGYAQQQGIDFTEVFA 934
++N+TW + + P+G + IG KW++K K G E ++KARLVAKG++Q++GID+ E+F+
Sbjct: 850 KKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFS 909
Query: 935 PVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKL 994
PV + +IR +L+I + QLDVK+AFLHG +DE + + QP+GY+ + KV L
Sbjct: 910 PVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLL 969
Query: 995 HKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTG 1054
K+LYGL+Q+PR W R DS+ G+ RS + +Y +Q +G I + LYVDD++
Sbjct: 970 KKSLYGLKQSPRQWNQRFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIAS 1029
Query: 1055 NCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSE-GIF-MCQSKYAKEVLERFGMK 1112
+ I + K S+ REF+M DLG LG+EI +N E GI + QS+Y VL FGM
Sbjct: 1030 QNKDQIQKLKESLNREFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMD 1089
Query: 1113 NSNPVRNPVVPGTKL---NKRGCGSEVD---ATQYKQMIGSLMYLTV-SRPDLMYSVSLV 1165
S + P+ KL N++ + + Y IGS+MY + SRPDL Y V +V
Sbjct: 1090 QSKVSQTPLGAHFKLRAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVV 1149
Query: 1166 SRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSG 1225
SR+M KP++ H Q VK VMRY+ GT D +++++ ++ Y DSDYA D+D R+S +G
Sbjct: 1150 SRFMSKPSKEHWQAVKWVMRYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITG 1209
Query: 1226 YVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIY 1285
+VF G +I+W S Q VV+LSTTEAE++A + IWLR + +G Q +
Sbjct: 1210 FVFTAGGNTISWKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVE-VM 1268
Query: 1286 CDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCST 1330
CD+ S I LSKN V H R+KHI+VRYHF+R+ + DG I++V ST
Sbjct: 1269 CDSQSAIALSKNSVHHERTKHIDVRYHFIREKIADGEIQVVKIST 1313
>At1g37110
Length = 1356
Score = 666 bits (1718), Expect = 0.0
Identities = 412/1297 (31%), Positives = 668/1297 (50%), Gaps = 84/1297 (6%)
Query: 67 KAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGMKE 126
+AKN + I +L + + T+ ++W ++ K ++ R+ Q F+++
Sbjct: 81 QAKNIIINHISDVVLLKVNHYATTADLWATLNKKYMETSLPNRIYTQLKLYSFKMVSTMT 140
Query: 127 GETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESNDVDTITI 186
+ V+ F R ++ + ++IQ + + ++ IL SL + +++ N T+T+
Sbjct: 141 IDQNVDEFLRIVAELGSLEIQVDEEVQAIL---ILNSLPASHIQLKHTLKYGN--KTLTV 195
Query: 187 DQLQSSLLVQEQRMKGY----REEEQALRATSSGKSERGRGRTGNRGRGRGRGSFNKESV 242
+ SS E+ + + + L T G+ + G +G+GR R S +K V
Sbjct: 196 QDVTSSAKSLERELAEAVDLDKGQAAVLYTTERGRPLVRNNQKGGQGKGRSR-SNSKTKV 254
Query: 243 ECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTTLKIQGVDKKSL 302
C+ C K GH + +C Y+ + E + E G + + + +
Sbjct: 255 PCWYCKKEGHVKKDC--------YSRKKKMESE----GQGEAGVITEKLVFSEALSVNEQ 302
Query: 303 LMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGK 362
++ +W LDSGC++HM R+WF + E TT+ LGDD + +G+
Sbjct: 303 MVK-------------DLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQ 349
Query: 363 GDVKLQI-GGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQ 421
G +++ GG I++ V ++P L+ NL+S G L + + R Y K+ ++
Sbjct: 350 GTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVR-YFKNNKTALR 408
Query: 422 SRMSSNRMFAVIATMIAPTCFSTTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLG 481
+S+ +T+++ C + T K ++ LWH R GH+ + LK+LA K ++ +
Sbjct: 409 GSLSNGLYVLDGSTVMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLI-DRKEIN 467
Query: 482 ELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICG-PIKPKSNSQKRYFITFIDD 540
EL+ CE C+ GK F +E L +H+D+ G P S S K+YF++ IDD
Sbjct: 468 ELEF-CEHCVMGKSKKVSF-NVGKHTSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDD 525
Query: 541 FCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGI 600
RK W+Y L K + F ++K L E + +K+ CLRTD G EF + F +C+ +GI
Sbjct: 526 KTRKVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGI 585
Query: 601 KRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAV 660
+R T +YTPQQNGV+ER NRTIM VRC+L + V FW EA + Y+ NRSP A+
Sbjct: 586 ERHRTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAI 645
Query: 661 KNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLY 720
+ PEE W +KP R FG +AY H + KL R++K +LG +K Y+++
Sbjct: 646 NHNVPEEMWLNRKPGYKHLRKFGSIAYVH---QDQGKLKPRALKGFFLGYPAGTKGYKVW 702
Query: 721 DPVSKKIIINRDVVFDESSGW-------DWSSGAEQMEFFDEMVDTNEVSTVPILDEVEH 773
+K +I+R+VVF ES + D + Q E V+ N+ + V
Sbjct: 703 LLEEEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQ 762
Query: 774 QVHSETNDTSPELEDNGEASVSASPGVAEEERER----------RGRRNVQQPVWMKEFV 823
T E + E V S E + R RRN+ P
Sbjct: 763 LQSDSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPT------ 816
Query: 824 SGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKS---DHWRKAMDLEIQAIERNNT 880
++E F E V +P +Y EA +S + W A E+ ++ +N T
Sbjct: 817 ---RFTEESSVTFALVVVENCIV---QEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGT 870
Query: 881 WQLAELPKGDKSIGVKWVYKTKLNEKG-EIEKHKARLVAKGYAQQQGIDFTEVFAPVARW 939
W L + PK K IG +W++K K G E + KARLVAKGY Q++G+D+ E+FAPV +
Sbjct: 871 WDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKH 930
Query: 940 DTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKLHKALY 999
+IR ++++ + + Q+DVK+ FLHG ++E ++++QP+G+ +E KV +L K+LY
Sbjct: 931 VSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLY 990
Query: 1000 GLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTGNCELL 1059
GL+Q+PR W R D + Q F+RS+ D +YVK I + LYVDD++ G +
Sbjct: 991 GLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAE 1050
Query: 1060 ISEFKASMEREFDMSDLGKMSYFLGVEILQNSEG--IFMCQSKYAKEVLERFGMKNSNPV 1117
I+ K + EF+M D+G S LG++I ++ +G + + Q Y ++VL+RF M +
Sbjct: 1051 INRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMT 1110
Query: 1118 RNPVVPGTKL---NKRGCGSEVDATQYKQMIGSLMYLTV-SRPDLMYSVSLVSRYMEKPT 1173
PV KL + + D Y +GS+MY + +RPDL Y++ L+SRYM KP
Sbjct: 1111 NAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPG 1170
Query: 1174 ELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSG 1233
+H + VK VMRYL G D+ + + + + Y DS+YA D+D R+S SGYVF +G
Sbjct: 1171 SMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGN 1230
Query: 1234 SIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIK 1293
+++W + Q VV++STTEAE+IA A + +W++ +L +G Q K I+CD+ S I
Sbjct: 1231 TVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVK-IWCDSQSAIC 1289
Query: 1294 LSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCST 1330
LSKN V H R+KHI+VR++++RD+V G ++++ T
Sbjct: 1290 LSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHT 1326
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 657 bits (1694), Expect = 0.0
Identities = 415/1297 (31%), Positives = 678/1297 (51%), Gaps = 69/1297 (5%)
Query: 67 KAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGMKE 126
KAKN +F ++ +L I +T+ E W+++ + RV Q F++ K+
Sbjct: 48 KAKNVIFLNVADKVLRKIELCKTAAEAWETLDRLFMIRSLPHRVYTQLSFYTFKMQENKK 107
Query: 127 GETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESNDVDTITI 186
+ ++ F + ++ +N ++I + ++ +L SL +++ +V +++ SN + + +
Sbjct: 108 IDENIDDFLKIVADLNHLQIDVTDEVQAIL---LLSSLPARYDGLVETMKYSNSREKLRL 164
Query: 187 DQLQSSLLVQEQRMKGYREEEQALRATSSGKSERGR-----GRTGNRGRGRGRGSFNKES 241
D + + +E RE Q R G RGR GN+G+ R R
Sbjct: 165 DDVMVAARDKE------RELSQNNRPVVEGHFARGRPDGKNNNQGNKGKNRSRSKSADGK 218
Query: 242 VECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTTLKIQGVDKKS 301
C+ C K GHF+ +C W E + D+ E L TE + L D+
Sbjct: 219 RVCWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMVLL---ATDETL 275
Query: 302 LLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKG 361
++ A E W LD+GCS HM ++WF + E + VK+G+D+ VKG
Sbjct: 276 VVTDSIANE----------WVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKG 325
Query: 362 KGDVKLQIGGLIQVF-TEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLII 420
G +K++ QV T+V ++P + NL+S+G L +R + +I K I+
Sbjct: 326 IGSIKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIV-KGCSTIL 384
Query: 421 QSRMSSNRMFAVIATMIAPTCFSTTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPML 480
+ + T + S +KDE+ LWH R GH+ G++IL +K ++ ++
Sbjct: 385 KGQKRDTLYILDGVTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLRR-EVI 443
Query: 481 GELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICG-PIKPKSNSQKRYFITFID 539
EL+ CE+C+ GKQH F E KL +HSD+ G P P S +YFI+F+D
Sbjct: 444 KELEF-CEDCVYGKQHRVSFAPAQHVTKE-KLAYVHSDLWGSPHNPASLGNSQYFISFVD 501
Query: 540 DFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNG 599
D+ RK W+Y L +K A E F ++K + E +S K+ LRTD G E+ + F +FC+ G
Sbjct: 502 DYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEG 561
Query: 600 IKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIA 659
I R T +YTPQQNG++ER NRTIM+ VR ML+ + ++FW EA + +VY+ NRSP+ A
Sbjct: 562 IVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTA 621
Query: 660 VKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRL 719
+ PEE W+G P ++ R FGC+AY H + + KL+ RS K I+ E K Y++
Sbjct: 622 INFDLPEEKWTGALPDLSSLRKFGCLAYIH---ADQGKLNPRSKKGIFTSYPEGVKGYKV 678
Query: 720 YDPVSKKIIINRDVVFDESSGWDWSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHSET 779
+ KK +I+R+V+F E + G Q + +++ + + ++ Q ++
Sbjct: 679 WVLEDKKCVISRNVIFREQVMFKDLKGDSQ-----NTISESDLEDLRVNPDMNDQEFTDQ 733
Query: 780 NDTSPELEDNGEASVSASPGVAEEERERRGRRNVQQPVWMKEFVSGEDLSDEGVSNFVCA 839
+ + + EA+ S +P V + + ++ E +S L + V + A
Sbjct: 734 GGATQDNSNPSEATTSHNP-VLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKA 792
Query: 840 DAEYSFVSI-----------HSDPMTYDEAAKSDHWRK---AMDLEIQAIERNNTWQLAE 885
+ +Y+ ++ +P +Y EA W K AM E+ ++ +N+TW L
Sbjct: 793 NPKYNESNMVGFAYYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVT 852
Query: 886 LPKGDKSIGVKWVYKTKLNEKG-EIEKHKARLVAKGYAQQQGIDFTEVFAPVARWDTIRT 944
P+ K IG +WV+ K G E + ARLVAKG+ Q++G+D+ E+F+PV + +IR
Sbjct: 853 KPEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRY 912
Query: 945 ILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKLHKALYGLRQA 1004
+L++ + Q+DVK+AFLHG ++E +++ QP+G++++ KV L ++LYGL+Q+
Sbjct: 913 LLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQS 972
Query: 1005 PRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTGNCELLISEFK 1064
PR W R D + + + RS D +Y K+ I + LYVDD++ + ++E K
Sbjct: 973 PRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELK 1032
Query: 1065 ASMEREFDMSDLGKMSYFLGVEILQNSEG--IFMCQSKYAKEVLERFGMKNSNPVRNPVV 1122
+ REF+M DLG LG+EI ++ + + + Q Y K+VL F M N+ PV P+
Sbjct: 1033 QLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLG 1092
Query: 1123 PGTKLNKRGCGSEVD-------ATQYKQMIGSLMYLTV-SRPDLMYSVSLVSRYMEKPTE 1174
KL K E + Y IGS+MY + +RPDL YS+ ++SR+M KP +
Sbjct: 1093 IHFKL-KAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLK 1151
Query: 1175 LHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGS 1234
H Q VK V+RY+ GT + +R+ L Y DSDY + D R+S +GYVF +G +
Sbjct: 1152 DHWQAVKWVLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNT 1211
Query: 1235 IAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIKL 1294
I+W SK Q VV++S+TEAE++A + +WL+ LG Q ++ D+ S I L
Sbjct: 1212 ISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVE-VHSDSQSAITL 1270
Query: 1295 SKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCSTE 1331
+KN V H R+KHI++R HF+RD++ G I++V +TE
Sbjct: 1271 AKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATE 1307
>At4g21360 putative transposable element
Length = 1308
Score = 633 bits (1633), Expect = 0.0
Identities = 411/1294 (31%), Positives = 678/1294 (51%), Gaps = 126/1294 (9%)
Query: 67 KAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGMKE 126
+AKN++ I ++L + + T+ E+W ++ ++ R+ Q F+++
Sbjct: 83 QAKNFIINHITDTVLLKVQHCVTAAELWATLNKLFMETSLPNRIYTQLRLYSFKMVDNLS 142
Query: 127 GETVVNYFARTLSIVNKMKIQ-GESIKETLIVEKILRSLTEKFNYVVCSIEESNDVDTIT 185
+ + F R ++ + ++IQ GE ++ LI L SL + + +++ N T++
Sbjct: 143 IDQNTDEFLRIVAELGSLQIQVGEEVQAILI----LNSLPPSYIQLKHTLKYGNK--TLS 196
Query: 186 IDQLQSSLLVQEQRMKGYREEEQALRATSSGKSERGRGRTGN-RGRGRGRGSFNKES-VE 243
+ + SS E+ + +E +A +T+ +ERGR +T N +G+G+GRG N +S +
Sbjct: 197 VQDVVSSAKSLERELSEQKETIRAPASTALYTAERGRPQTKNTQGQGKGRGRSNSKSRLT 256
Query: 244 CYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTTLKIQGVDKKSLL 303
C+ C K GH + +C YA + E GK T K+ + S+
Sbjct: 257 CWFCKKEGHVKKDC--------YAGKRKLENE-------GQGKAGVITEKLVYSEALSMY 301
Query: 304 MAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMTVKGKG 363
+ + W +DSGC+ HM +WF +E+ TT + LGDD + KG G
Sbjct: 302 DQEAKDK----------WVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSG 351
Query: 364 DVKLQI-GGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQS 422
VK+ GG I+V V F+P L+ NL+S G L + R Y ++K + +
Sbjct: 352 TVKVNTHGGSIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKENKTALCGN 411
Query: 423 RMSSNRMFAVIA-TMIAPTCFSTTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLG 481
+ N ++ + T++ C +++ELWH R GH+ + +KILA+K +++ +
Sbjct: 412 LV--NGLYVLDGHTVVNENCNVEGSNEKTELWHCRLGHMSLNNMKILAEKGLLEKKD-IK 468
Query: 482 ELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDF 541
EL CE C+ GK F + L IH+D+ G K+YF++ IDD
Sbjct: 469 ELSF-CENCVMGKSKKLSF-NVGKHITDEVLGYIHADLWG---------KQYFLSIIDDK 517
Query: 542 CRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIK 601
RK W+ L K E F ++K L E + +K+ LRTD G EF + +F EFC+ NGI+
Sbjct: 518 SRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIE 577
Query: 602 RQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVK 661
R T +YTPQQNGV++R NRT+M VRC+L E + FW EA + Y+ NRSP AV
Sbjct: 578 RHRTCTYTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVD 637
Query: 662 NITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYD 721
+ PEE W KKP R FGC+AY H+ + KL R++K ++LG + +K Y+++
Sbjct: 638 HNVPEELWLDKKPGYKHLRRFGCIAYVHL---DQGKLKPRALKGVFLGYPQGTKGYKVWL 694
Query: 722 PVSKKIIINRDVVFDESSGW-DWSSGAEQM-----------EFFDEMVDTNEVSTV--PI 767
+K +I+R++VF+E+ + D +EQ EF + + E S
Sbjct: 695 LDEEKCVISRNIVFNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTGGVT 754
Query: 768 LDEVEHQVHSETNDTSPELEDNGEASVSASPGVAEEERERRGRRNVQQPVWMKEFVSGED 827
++E++ + SE + T L AS+ S + +RERR Q+ F
Sbjct: 755 IEEIDQESDSENSVTQEPL----IASIDLSNYQSARDRERRAPNPPQKLADYTHFALALV 810
Query: 828 LSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSDHWRK---AMDLEIQAIERNNTWQLA 884
+++E S +P Y +A K HW K M EI ++ +N TW +
Sbjct: 811 MAEEIES---------------EEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIV 855
Query: 885 ELPKGDKSIGVKWVYKTKLNEKG-EIEKHKARLVAKGYAQQQGIDFTEVFAPVARWDTIR 943
E PK K I +W++K K G E +++KARLVA+G+ QQ+GID+ EVFAPV + +IR
Sbjct: 856 EWPKEQKVISCRWLFKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIR 915
Query: 944 TILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAERKVYKLHKALYGLRQ 1003
+++ + Q+DVK+ FLHG++D+ ++++QP+G++V + +V L K+LYGL+Q
Sbjct: 916 ILMSAVVKDDMELEQMDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQ 975
Query: 1004 APRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTGNCELLISEF 1063
APR W + ++ F RS+ D +YVK+ G + + LYVDD++ + IS+
Sbjct: 976 APRQWNKKFHAFMLSLQFARSEHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKL 1035
Query: 1064 KASMEREFDMSDLGKMSYFLGVEILQN-SEG-IFMCQSKYAKEVLERFGMKNSNPVRNPV 1121
K ++ +F+M D+G S LG++I++N EG + + Q++Y +V++RF M ++ V P+
Sbjct: 1036 KEALSLKFEMKDMGAASRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPM 1095
Query: 1122 VPGTKLNK--RGCGS-EVDATQYKQMIGSLMYLTVSR-PDLMYSVSLVSRYMEKPTELHV 1177
KL GS + + Y +GS+MY + PD+ Y++ LVSR+M +P
Sbjct: 1096 GAHFKLTSLIDEIGSVDPEVVPYSSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRP----- 1150
Query: 1178 QIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGSIAW 1237
++++ Y DSD+A D+D R+S SGYVF +G +++W
Sbjct: 1151 ----------------------GANLEVQGYCDSDHAADLDKRRSISGYVFTVGGNTVSW 1188
Query: 1238 SSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIKLSKN 1297
S Q VV+LS+T+AEFIA + IW+R +L +G +Q K +T++CD+ S I LSKN
Sbjct: 1189 KSSLQHVVALSSTQAEFIALTEAVKEAIWIRGLLEDMG-LQPKPATVWCDSQSAICLSKN 1247
Query: 1298 PVMHGRSKHINVRYHFLRDLVRDGRIEL--VHCS 1329
H R+KH+ V+++F+RD++ G +++ +H S
Sbjct: 1248 NAFHDRTKHVEVKFYFIRDIIEAGEVKVRKIHTS 1281
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 627 bits (1618), Expect = e-179
Identities = 404/1316 (30%), Positives = 691/1316 (51%), Gaps = 83/1316 (6%)
Query: 53 EQIKIHEEAKLKDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQL 112
E+++ E + K KA++ + S+ +L I T+ + ++ R+
Sbjct: 59 EKLEKFEALEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLALDKLYMSKALPNRIYP 118
Query: 113 QALRREFEVLGMKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVV 172
+ F+ M E +V L I+ ++ I + +L +L + F+ +
Sbjct: 119 KQKLYSFK---MSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLK 175
Query: 173 CSIEESNDVDTITIDQLQSSLLVQEQRMKGYRE--EEQALRATSSGKSERGRGRTGNRGR 230
+++ S+ +T+D++ +++ +E + ++ + QA K+E +G+ +G+
Sbjct: 176 DTLKYSSGKSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVKDKNEN-KGKGEQKGK 234
Query: 231 GRGRGSFNKESVECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHT 290
G+G+ +K+ C+ C + GHF+ CP + + + ++ + GK +
Sbjct: 235 GKGKKGKSKKKPGCWTCGEEGHFRSSCPNQNKP-------QFKQSQVVKGESSGGKGNLA 287
Query: 291 TLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVK 350
V + +L + E W LD+GCS HM REWFH +E +V+
Sbjct: 288 EAAGYYVSE-ALSSTEVHLED--------EWILDTGCSYHMTYKREWFHEFNEDAGGSVR 338
Query: 351 LGDDSIMTVKGKGDVKLQIG-GLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWC 409
+G+ ++ V+G G ++++ GL V T V +IP++ NLLS+G + +
Sbjct: 339 MGNKTVSRVRGVGTIRVKNSDGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGIL 398
Query: 410 RIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCFSTTIK-DESELWHKRYGHLGYSGLKIL 468
RI ++ L+ R + ++ + +A + + D++ LWH+R H+ ++IL
Sbjct: 399 RIKAGNQVLLTGRRYDT--LYLLNWKPVASESLAVVKRADDTVLWHQRLCHMSQKNMEIL 456
Query: 469 AQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICG-PIKPKS 527
+K + + LD CE+C+ GK F + + KL+ IHSD+ G P P S
Sbjct: 457 VRKGFLDK-KKVSSLDV-CEDCIYGKAKRKSF-SLAHHDTKEKLEYIHSDLWGAPFVPLS 513
Query: 528 NSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFN 587
+ +YF++ IDDF RK WVY + K A E F ++ L E ++ ++ LRTD G EF
Sbjct: 514 LGKCQYFMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFC 573
Query: 588 SREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNW 647
++ F FCE GI R T +YTPQQNGV+ER NRTIM VR ML++ +P+ FW EA +
Sbjct: 574 NKLFDGFCESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHT 633
Query: 648 SVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIY 707
+V + N++P+ A+ P++ WSG P ++ R +GCVA+ H D KL+ R+ K +
Sbjct: 634 TVLLINKTPSSALNFEIPDKKWSGNPPVYSYLRRYGCVAFVHTDDG---KLEPRAKKGVL 690
Query: 708 LGSSEESKAYRLYDPVSKKIIINRDVVFDESSGW--------------DWSSGAE---QM 750
+G K Y+++ +K +++R+++F E++ + D +G+ +
Sbjct: 691 IGYPVGVKGYKVWILDERKCVVSRNIIFQENAVYKDLMQRQENVSTEEDDQTGSYLEFDL 750
Query: 751 EFFDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELEDNGEASVSASPGVAEEERERRGR 810
E +++ + V + E V S T+ + D+ ++ V+ SP R+ R +
Sbjct: 751 EAERDVISGGDQEMVNTIPAPESPVVS--TPTTQDTNDDEDSDVNQSPLSYHLVRD-RDK 807
Query: 811 RNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEA---AKSDHWRKA 867
R ++ P + F ED E + + D E +P Y +A A D W+ A
Sbjct: 808 REIRAP---RRF-DDEDYYAEAL--YTTEDGE------AVEPENYRKAKLDANFDKWKLA 855
Query: 868 MDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKG-EIEKHKARLVAKGYAQQQG 926
MD EI + E+NNTW + P+ + IG +W++K KL G E + KARLVAKGYAQ++G
Sbjct: 856 MDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKLGILGVEEPRFKARLVAKGYAQKEG 915
Query: 927 IDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRG 986
ID+ E+FAPV + +IR +L+I A + QLDVK+AFLHG++ E +++ P+GY+
Sbjct: 916 IDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVKTAFLHGELKEKIYMSPPEGYESMF 975
Query: 987 AERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLY 1046
+V L+KALYGL+QAP+ W + D++ ++ FV+S D Y K +G + + +Y
Sbjct: 976 KANEVCLLNKALYGLKQAPKQWNEKFDNFMKEICFVKSAYDSCAYTKVLPDGSVMYLLIY 1035
Query: 1047 VDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSE--GIFMCQSKYAKE 1104
VDD++ + I+ KA++ F+M DLG LG+EI+++ +++ Q Y +
Sbjct: 1036 VDDILVASKNKEAITALKANLGMRFEMKDLGAAKKILGMEIIRDRTLGVLWLSQEGYLNK 1095
Query: 1105 VLERFGMKNSNPVRNPVVPGTKLNKRGCGSE--------VDATQYKQMIGSLMYLTV-SR 1155
+LE + M + P P+ G + + + + Y +GS+MY + +R
Sbjct: 1096 ILETYNMAEAKPAMTPL--GAHFKFQAATEQKLIRDEDFMKSVPYSSAVGSIMYAMLGTR 1153
Query: 1156 PDLMYSVSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAG 1215
PDL Y V ++SR+M +P + H VK V+RY+ GT+ + Y++S S ++ Y D+DYA
Sbjct: 1154 PDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLCYKKSSSFSIVGYCDADYAA 1213
Query: 1216 DVDDRKSTSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLG 1275
D+D R+S +G VF LG +I+W S Q VV+ STTE+E+++ + IWL+ +L G
Sbjct: 1214 DLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFG 1273
Query: 1276 QVQGKCSTIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCSTE 1331
Q K I+CD+ S I LSKN V H R+KHI+V+YHF+R+++ DG +E++ STE
Sbjct: 1274 YEQ-KSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFIREIISDGTVEVLKISTE 1328
>At3g45520 copia-like polyprotein
Length = 1363
Score = 621 bits (1601), Expect = e-178
Identities = 425/1375 (30%), Positives = 691/1375 (49%), Gaps = 102/1375 (7%)
Query: 12 VPKFDGHYDH--WA---------LLMENLLRSKEYWPIVADGVPALAPNANAEQIKIHEE 60
V KFDG D+ W L + +LR E P+ + + E+ + E
Sbjct: 8 VEKFDGRGDYTMWKEKLLAHIDMLGLSAVLRESET-PMGKERDSEKSDEDEKEEREKMEA 66
Query: 61 AKLKDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFE 120
+ K KA++ + S+ +L I ++ + +++ R+ L+ F+
Sbjct: 67 FEEKKRKARSTIVLSVSDRVLRKIKKETSAAAMLEALDRLYMSKALPNRIYLKQKLYSFK 126
Query: 121 VLGMKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEESND 180
+ E ++ F ++ + + + + ++ +L SL + F+ + +++ S+
Sbjct: 127 MSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAIL---LLMSLPKPFDQLKDTLKYSSG 183
Query: 181 VDTITIDQLQSSLLVQEQRMKGYRE--EEQALRATSSGKSERGRGRTGNRGRGRGRGSFN 238
+++D++ +++ +E ++ + QA K+E RGR+ + +G+G+ S +
Sbjct: 184 KTVLSLDEVAAAIYSRELEFGSVKKSIKGQAEGLYVKDKAEN-RGRSEQKDKGKGKRSKS 242
Query: 239 KESVECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETGKTSHTTLKIQGVD 298
K C+ C + GH + CP + + + E + GK + + V+
Sbjct: 243 KSKRGCWICGEDGHLKSTCPN-KNKPQFKNQGSNKGE------SSGGKGNLVEGSVNFVE 295
Query: 299 KKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESFTTTVKLGDDSIMT 358
+ +++ A + W +D+GC HM REW + DE +V++G+ SI
Sbjct: 296 SAGMFVSE-ALSSTDIHLEDE-WIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISR 353
Query: 359 VKGKGDVKL-QIGGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKG 417
VKG G V++ GL V +IP++ NLLS+G TF+K + ++
Sbjct: 354 VKGVGTVRIVNDNGLTVTLQNVRYIPDMDRNLLSLG---------TFEKAGHKFESENGM 404
Query: 418 LIIQSR---MSSNRMFAVIATMIAPTCFSTTI-----KDESELWHKRYGHLGYSGLKILA 469
L I+S + R + + + ++ D++ LWH+R H+ + +L
Sbjct: 405 LRIKSGNQVLLEGRRYDTLYILHGKPATDESLAVARANDDTVLWHRRLCHMSQKNMSLLI 464
Query: 470 QKAMV--KGLPMLGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICG-PIKPK 526
+K + K + ML CE+C+ G+ F + ++KL+ +HSD+ G P P
Sbjct: 465 KKGFLDKKKVSMLDT----CEDCIYGRAKKIGF-NLAQHDTKKKLEYVHSDLWGAPTVPM 519
Query: 527 SNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEF 586
S +YFI+FIDD+ RK WVY L K A E F + L E +SGE++ LRTD G EF
Sbjct: 520 SLGNCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEF 579
Query: 587 NSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVN 646
+R F FCE G +R T +YTPQQNGV ER NRTIM VR ML + +P+ FW EA +
Sbjct: 580 CNRMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATH 639
Query: 647 WSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCI 706
+V + N++P A+ P++ WSGK P ++ R +GCV + H KL+ R+ K +
Sbjct: 640 TAVLLINKTPCSAINFEFPDKRWSGKAPIYSYLRRYGCVTFVHTDGG---KLNLRAKKGV 696
Query: 707 YLGSSEESKAYRLYDPVSKKIIINRDVVFDESSGW-DWSSGAEQM---------EFFD-- 754
+G K Y+++ KK +++R+V F E++ + D EQ+ + D
Sbjct: 697 LIGYPSGVKGYKVWLIEEKKCVVSRNVSFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLD 756
Query: 755 -EMVDTNEVSTVPILDEVEHQVHSETNDTSP--ELEDNGEASVSASPGVAEEERERRGRR 811
E N +V T P E +D E V SP R+R RR
Sbjct: 757 LEADKDNSSGGEQSQAQVTPATRGAVTSTPPRYETDDIEETDVHQSPLSYHLVRDRE-RR 815
Query: 812 NVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKS---DHWRKAM 868
++ P + F ED E + DA +P Y EA + D WR AM
Sbjct: 816 EIRAP---RRF-DDEDYYAEALYTTEDGDA--------VEPADYKEAVRDENWDKWRLAM 863
Query: 869 DLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKG-EIEKHKARLVAKGYAQQQGI 927
+ EI++ +N+TW P+ + IG +W+YK K G E + KARLVAKGYAQ++G+
Sbjct: 864 NEEIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGV 923
Query: 928 DFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGA 987
D+ E+FAPV + +IR +L+I A + QLDVK+AFLHG++ E +++ P+G +
Sbjct: 924 DYHEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTAFLHGELKEKIYMMPPEGCESLFK 983
Query: 988 ERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYV 1047
E +V L+K+LYGL+QAPR W + + Y + GF RSD D Y K+ + + + YV
Sbjct: 984 ENEVCLLNKSLYGLKQAPRQWNEKFNHYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYV 1043
Query: 1048 DDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSEG--IFMCQSKYAKEV 1105
DD++ N I K + +F+M DLG LG+EI+ + E +++ Q Y +V
Sbjct: 1044 DDMLVAANNMQAIDALKKELSIKFEMKDLGAAKKILGIEIIIDREAGVLWLSQESYLNKV 1103
Query: 1106 LERFGMKNSNPVRNPVVPGTKLNKRGCGSE--------VDATQYKQMIGSLMYLTV-SRP 1156
L+ F M S P P+ G L + E +++ Y +GS+MY + +RP
Sbjct: 1104 LKTFNMLESKPALTPL--GAHLKMKSATEEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRP 1161
Query: 1157 DLMYSVSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGD 1216
DL Y V +VSR+M +P + H VK V+RY+ GTVD + Y+R+ + Y D+DYA D
Sbjct: 1162 DLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCYKRNSDFSICGYCDADYAAD 1221
Query: 1217 VDDRKSTSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQ 1276
+D R+S +G VF LG +I+W S Q VV+ S+TE E+++ + IWL+ +L G
Sbjct: 1222 LDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGY 1281
Query: 1277 VQGKCSTIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCSTE 1331
Q K I+CD+ S I LSKN V H R+KHI+V++HF+R+++ DG++E+ STE
Sbjct: 1282 EQ-KNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTE 1335
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 616 bits (1588), Expect = e-176
Identities = 402/1323 (30%), Positives = 686/1323 (51%), Gaps = 106/1323 (8%)
Query: 46 LAPNANAEQIKIHEEAKLKDLKAKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGST 105
L E++ E + K KA++ + S+ +L I +++ + +
Sbjct: 52 LTEEEEKEEVLRRELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKA 111
Query: 106 KVKRVQLQALRREFEVLGMKEGETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLT 165
R+ + F++ E ++ F R ++ + + + ++ +L SL
Sbjct: 112 LPNRIYQKQKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAIL---LLMSLP 168
Query: 166 EKFNYVVCSIEESNDVDTITIDQLQSSLLVQEQRMKGYREEEQALRATSSGKSERGRGRT 225
+ F+ + +++ T+++D++ +++ +E + +++++ + G + + T
Sbjct: 169 KPFDQLRDTLKYGLGRVTLSLDEVVAAIYSKELELGS---NKKSIKGQAEGLFVKEKTET 225
Query: 226 GNRGRGRGRGSFNKESVECYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMARTETG 285
R RG + NK+S + K C ES+N + + + L + +
Sbjct: 226 RGRTEQRGNNNNNKKSRSKSRSKK------GCWICGESSNGSSNYSEANGLYV-----SE 274
Query: 286 KTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNLDESF 345
S T + ++ W +D+GCS HM REWF +L+E
Sbjct: 275 ALSSTDIHLEDE-----------------------WVMDTGCSYHMTYKREWFEDLNEDA 311
Query: 346 TTTVKLGDDSIMTVKGKGDVKLQI-GGLIQVFTEVYFIPELKNNLLSIGQLLERDLSITF 404
+V++G+ ++ V+G G ++++ G++ T V +IPE+ NLLS+G + S
Sbjct: 312 GGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNVRYIPEMDRNLLSLGTFEKSGYSFKL 371
Query: 405 KKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCFSTTIK-DESELWHKRYGHLGYS 463
+ I D L+ R + ++ + + S + D++ LWH+R GH+
Sbjct: 372 ENGTLSIIAGDSVLLTVRRCYT--LYLLQWRPVTEESLSVVKRQDDTILWHRRLGHMSQK 429
Query: 464 GLKILAQKAMVKGLPMLGELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICG-P 522
+ +L +K ++ + +L+ CE+C+ GK F + KL+ +HSD+ G P
Sbjct: 430 NMDLLLKKGLLDK-KKVSKLET-CEDCIYGKAKRIGF-NLAQHDTREKLEYVHSDLWGAP 486
Query: 523 IKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDR 582
P S + +YFI+FIDD+ RK +Y L K A + F ++ L E ++ +++ LRTD
Sbjct: 487 SVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDN 546
Query: 583 GGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWP 642
G EF +R F EFC GI T +YTPQQNGV+ER NRT+M VR ML++ +P++FW
Sbjct: 547 GLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWA 606
Query: 643 EAVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRS 702
EA + + + N++P+ A+ P++ WSGK P ++ R FGC+A+ H D KL+ R+
Sbjct: 607 EATHTTAILINKTPSSALNYEVPDKRWSGKSPIYSYLRRFGCIAFVHTDDG---KLNPRA 663
Query: 703 IKCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESSGWDWSSGAEQMEFFDEMVDTNEV 762
K I +G K Y+++ KK +++R+V+F E++ + + M+ D D NE
Sbjct: 664 KKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQENASYK-----DMMQSKDAEKDENEA 718
Query: 763 STVPILD-EVEHQVHSETNDTSPELED------------------NGEASVSASPGVAEE 803
LD +++H+ + P +E N E + SP +
Sbjct: 719 PPSSYLDLDLDHEEVITSGGDDPIVEAQSPFNPSPATTQTYSEGVNSETDIIQSPLSYQL 778
Query: 804 ERERRGRRNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSDH 863
R+R RR ++ PV + ED E + + D S +P Y EA +S +
Sbjct: 779 VRDR-DRRTIRAPVRFDD----EDYLAEAL--YTTED------SGEIEPADYSEAKRSMN 825
Query: 864 WRK---AMDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEIE-KHKARLVAK 919
W K AM+ E+++ +N+TW + + P+ K IG +W+YK KL G E + KARLVAK
Sbjct: 826 WNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFKARLVAK 885
Query: 920 GYAQQQGIDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQP 979
GYAQ++GID+ E+FAPV + +IR +++I A + QLDVK+AFLHG++ E +++ P
Sbjct: 886 GYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTAFLHGELKEKIYMVPP 945
Query: 980 QGYQVRGAERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGL 1039
+GY+ E +V L+K+LYGL+QAP+ W + ++Y + GF+RS D Y+K+ +G
Sbjct: 946 EGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLYDSCAYIKELSDGS 1005
Query: 1040 AIIVSLYVDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQNSE--GIFMC 1097
+ + LYVDD++ + IS+ K + + FDM DLG LG+EI++N E +++
Sbjct: 1006 RVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILGMEIIRNREENTLWLS 1065
Query: 1098 QSKYAKEVLERFGMKNSNPVRNPVVPGTKLNKRGCGSE--------VDATQYKQMIGSLM 1149
Q+ Y ++LE + M S V P+ G L R E + + Y +GS+M
Sbjct: 1066 QNGYLNKILETYNMAESKHVVTPL--GAHLKMRAATVEKQEQDEDYMKSIPYSSAVGSIM 1123
Query: 1150 YLTV-SRPDLMYSVSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISY 1208
Y + +RPDL Y V ++SRYM +P H VK V+RY+ G++ +QY+RS K++ Y
Sbjct: 1124 YAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQYKRSSDFKVVGY 1183
Query: 1209 TDSDYAGDVDDRKSTSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLR 1268
D+D+A D R+S +G VF LG +I+W S +Q VV+LSTTEAE+++ + +W++
Sbjct: 1184 CDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYMSLTEAVKEAVWMK 1243
Query: 1269 RILFSLGQVQGKCSTIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHC 1328
+L G Q K I+CD+ S I LSKN V H R+KHI+VRY ++RD++ +G ++V
Sbjct: 1244 GLLKEFGYEQ-KSVEIFCDSQSAIALSKNNVHHERTKHIDVRYQYIRDIIANGDGDVVKI 1302
Query: 1329 STE 1331
TE
Sbjct: 1303 DTE 1305
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 602 bits (1553), Expect = e-172
Identities = 397/1380 (28%), Positives = 670/1380 (47%), Gaps = 134/1380 (9%)
Query: 16 DGHYDHWALLMENLLRSKEYWPIVADGVPALAPN--------ANAEQIKIHEEAKLKDLK 67
D +Y W E+LL S++ V V A + + + E ++E D
Sbjct: 23 DSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSEEPNPLYESWFCTDQL 82
Query: 68 AKNYLFQSIERSILETILNMETSKEIWDSMRLKNQGSTKVKRVQLQALRREFEVLGMKEG 127
+++LF ++ +L + N+ TS++IW S+ +N + V R +LR+ ++L KE
Sbjct: 83 VRSWLFGTLSEEVLGHVHNLSTSRQIWVSLA-ENFNKSSVAREF--SLRQNLQLLSKKEK 139
Query: 128 ETVVNYFARTLSIVNKMKIQGESIKETLIVEKILRSLTEKFNYVVCSIEES-NDVDTITI 186
V Y +I + + G+ + E++ + L L ++ + I+ S + + T T
Sbjct: 140 PFSV-YCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDPITTVIQSSLSKLPTPTF 198
Query: 187 DQLQSSLLVQEQRMKGYREEEQA-------LRATSSGK-----SERGRGRTG-NRGRG-- 231
+ + S + + +++ Y E + + SG +++GRGR+G N+GRG
Sbjct: 199 NDVVSEVQGFDSKLQSYEEAASVTPHLAFNIERSESGSPQYNPNQKGRGRSGQNKGRGGY 258
Query: 232 --RGRGSFNKESVE--------CYKCHKLGHFQYECPTWEESANYAELHEDHEELLLMAR 281
RGRG +S C C + GH +C ++ AE+
Sbjct: 259 STRGRGFSQHQSSPQVSGPRPVCQICGRTGHTALKCYNRFDNNYQAEIQ----------- 307
Query: 282 TETGKTSHTTLKIQGVDKKSLLMAKTAQEGCSCPTSGKVWFLDSGCSNHMCGSREWFHNL 341
+ +TL++ +GK W DS + H+ S +
Sbjct: 308 ------AFSTLRVSD-------------------DTGKEWHPDSAATAHVTSSTNGLQSA 342
Query: 342 DE-SFTTTVKLGDDSIMTVKGKGDVKLQIGGLIQVFTEVYFIPELKNNLLSIGQLLER-D 399
E V +GD + + + G ++ EV +P ++ +LLS+ +L +
Sbjct: 343 TEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLNEVLVVPNIQKSLLSVSKLCDDYP 402
Query: 400 LSITFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATMIAPTCFSTTIKDESELWHKRYGH 459
+ F I ++ + N ++ + + E+WH R GH
Sbjct: 403 CGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLENQEFVALYSNRQCAATEEVWHHRLGH 462
Query: 460 LGYSGLKILAQKAMVKGLPMLGELDKP-CEECLKGKQHIDPFPQKSTWRAERKLQLIHSD 518
L+ L K + + P CE C GK PF + R L IH D
Sbjct: 463 ANSKALQHLQNS---KAIQINKSRTSPVCEPCQMGKSSRLPFLISDS-RVLHPLDRIHCD 518
Query: 519 ICGPIKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCL 578
+ GP SN +Y+ F+DD+ R +W Y L KS L F F+ L E + K+
Sbjct: 519 LWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVF 578
Query: 579 RTDRGGEFNSREFTEFCELNGIKRQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPR 638
++D GGEF S + +GI +++ YTPQQNG++ERK+R ++ + ML P+
Sbjct: 579 QSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQ 638
Query: 639 EFWPEAVNWSVYIQNRSPTIAVKNITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKL 698
+FW E+ + YI NR P+ +KN++P E G+KP + R+FG Y + + K
Sbjct: 639 KFWVESFFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKF 698
Query: 699 DNRSIKCIYLGSSEESKAYRLYDPVSKKIIINRDVVFDESS------------------- 739
D RS++C++LG + + K YR + P + K+ I+R+V+F+ES
Sbjct: 699 DPRSLQCVFLGYNSQYKGYRCFYPPTGKVYISRNVIFNESELPFKEKYQSLVPQYSTPLL 758
Query: 740 -GW------DWSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELEDNGEA 792
W + S A ++ F + +D N + + +++ T PE N E
Sbjct: 759 QAWQHNKISEISVPAAPVQLFSKPIDLNTYAGSQVTEQL----------TDPEPTSNNEG 808
Query: 793 SVSASPGVAEEERERRGRRNVQQPVWMKEFVSGEDLSDEGVSNFVCADAEYSFVSIH--- 849
S VAEE + ++ ++ ++ + + Y+ ++
Sbjct: 809 SDEEVNPVAEEIAANQ-----------EQVINSHAMTTRSKAGIQKPNTRYALITSRMNT 857
Query: 850 SDPMTYDEAAKSDHWRKAMDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGEI 909
++P T A K W +A+ EI + +TW L + KWV+KTKL+ G I
Sbjct: 858 AEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSI 917
Query: 910 EKHKARLVAKGYAQQQGIDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHGK 969
+K KARLVAKG+ Q++G+D+ E F+PV R TIR +L ++ +GW + QLDV +AFLHG+
Sbjct: 918 DKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVSNAFLHGE 977
Query: 970 IDETVFVDQPQGYQVRGAERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDHT 1029
+ E VF+ QP G+ V +L KA+YGL+QAPRAW+ ++ GFV S SD +
Sbjct: 978 LQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPS 1037
Query: 1030 LYVKQGENGLAIIVSLYVDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEILQ 1089
L+V ++G + + LYVDD++ TG+ + L+ + +++ F M DLG YFLG++I
Sbjct: 1038 LFVCH-QDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFLGIQIED 1096
Query: 1090 NSEGIFMCQSKYAKEVLERFGMKNSNPVRNPVVPGTKLNKRGCGSEVDATQYKQMIGSLM 1149
+ G+F+ Q+ YA ++L++ GM + NP+ P+ +L+ + T ++ + G L
Sbjct: 1097 YANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQ--QLDNLNSELFAEPTYFRSLAGKLQ 1154
Query: 1150 YLTVSRPDLMYSVSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRRSGSMKLISYT 1209
YLT++RPD+ ++V+ + + M PT ++KR++RY+ GT+ MG+ +R+ ++ L +Y+
Sbjct: 1155 YLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNSTLTLSAYS 1214
Query: 1210 DSDYAGDVDDRKSTSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVSCACQCIWLRR 1269
DSD+AG + R+ST+G+ +LGS I+WS+K+Q VS S+TEAE+ A A + W+
Sbjct: 1215 DSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAAREITWISF 1274
Query: 1270 ILFSLGQVQGKCSTIYCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDLVRDGRIELVHCS 1329
+L LG Q + +YCDN S + LS NP +H RSKH + YH++R+ V G IE H S
Sbjct: 1275 LLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLIETQHIS 1334
>At4g03810 putative retrotransposon protein
Length = 964
Score = 552 bits (1422), Expect = e-157
Identities = 334/974 (34%), Positives = 524/974 (53%), Gaps = 70/974 (7%)
Query: 380 YFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQSRMSSNRMFAVIATM--- 436
Y++P + N++S+ L + K K C D + S N + + +M
Sbjct: 9 YYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRDD--MFYGSAPLDNGLHVLNQSMPIY 66
Query: 437 -IAPTCFSTTIKDESELWHKRYGHLGYSGLKILAQKAMVKGLPMLGELDKPCEECLKGKQ 495
I F + + + LWH R GH+ ++ L ++ E + CE CL GK
Sbjct: 67 NIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDY--ESYETCESCLLGKM 124
Query: 496 HIDPFPQKSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDFCRKTWVYLLSEKSG 555
PF S RA L LIH+D+CGP+ + +YFITF DDF R +VYL+ KS
Sbjct: 125 TKAPFTGHSE-RASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSK 183
Query: 556 ALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIKRQLTASYTPQQNGV 615
+ E+FK+F+ + + G+ + LR+DRGGE+ S+ F++ GI QLT TPQ NGV
Sbjct: 184 SFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGV 243
Query: 616 SERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVKNITPEECWSGKKPS 675
SER+NRT+++MVR M++ +P FW A+ S ++ NR P+ +V+ TP E W+GK P+
Sbjct: 244 SERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEK-TPYEIWTGKVPN 302
Query: 676 VNFFRIFGCVAYAH--VPDSQRRKLDNRSIKCIYLGSSEESKAYRLYDPVSKKIIINRDV 733
++F +I+GC +YA + D KL +S KC ++G +E+K Y Y P K+ + R+
Sbjct: 303 LSFLKIWGCESYAKRLITD----KLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNG 358
Query: 734 VFDESSGWDWSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHSETNDTSPELEDNGEAS 793
F E EF + ++V +L+EV E G+
Sbjct: 359 AFLER------------EFLSKGTSGSKV----LLEEVR--------------EPQGDVP 388
Query: 794 VSASPGVAEEERERRGRRNVQQPVWMKEFVSGEDLSDEGVSNFV--CADAEYSFVSIHSD 851
S +E + R V +P+ ++ V + S F D F+ +
Sbjct: 389 TS-------QEEHQLDLRRVVEPILVEPEVRRSERSRHEPDRFRDWVMDDHALFMIESDE 441
Query: 852 PMTYDEAAK---SDHWRKAMDLEIQAIERNNTWQLAELPKGDKSIGVKWVYKTKLNEKGE 908
P +Y+EA SD W +A E++++ +N W L +LP G K I KW++K K++ G
Sbjct: 442 PTSYEEALMGPDSDKWLEAAKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGN 501
Query: 909 IEKHKARLVAKGYAQQQGIDFTEVFAPVARWDTIRTILAIAAVRGWNVFQLDVKSAFLHG 968
I+ +KA LVAKGY Q GID+ E ++PVA +IR +LA AA + ++Q+DVK+AFL+G
Sbjct: 502 IQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNG 561
Query: 969 KIDETVFVDQPQGYQVRGAERKVYKLHKALYGLRQAPRAWYSRIDSYFQKQGFVRSDSDH 1028
++E V++ QP+G+ V A RKV KLH+++YGL+QA R+W R + ++ F+R++ +
Sbjct: 562 NLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEP 621
Query: 1029 TLYVKQGENGLAIIVSLYVDDLIYTGNCELLISEFKASMEREFDMSDLGKMSYFLGVEIL 1088
+Y K + +A +V LYVDD++ GN L+ K + F M D+G+ +Y LG+ I
Sbjct: 622 CVYKKTSGSAVAFLV-LYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIY 680
Query: 1089 QN--SEGIFMCQSKYAKEVLERFGMKNSNPVRNPVVPGTKLNKRGCGSEVDATQ------ 1140
++ ++ I + Q Y +VL RF M +S P+ G L+K C S D +
Sbjct: 681 RDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIP 740
Query: 1141 YKQMIGSLMY-LTVSRPDLMYSVSLVSRYMEKPTELHVQIVKRVMRYLNGTVDMGIQYRR 1199
Y IGS+MY + +RPD+ ++S+ SRY P E H +V+ + +YL T D + Y
Sbjct: 741 YASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGG 800
Query: 1200 SGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGSIAWSSKKQAVVSLSTTEAEFIAAVS 1259
S + + YTD+ + D DD +S SG+ F L G+++W S KQ+ V+ STTEAE+IAA
Sbjct: 801 SEELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASE 860
Query: 1260 CACQCIWLRRILFSLGQVQGKCSTI--YCDNSSTIKLSKNPVMHGRSKHINVRYHFLRDL 1317
A + +W+R+ + LG V I YCDN+ I +K P H +SKHI RYH +R++
Sbjct: 861 AAKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREI 920
Query: 1318 VRDGRIELVHCSTE 1331
+ G +++ ST+
Sbjct: 921 IDRGDVKISRVSTD 934
>At1g70010 hypothetical protein
Length = 1315
Score = 530 bits (1365), Expect = e-150
Identities = 311/989 (31%), Positives = 510/989 (51%), Gaps = 61/989 (6%)
Query: 375 VFTEVYFIPELKNNLLSIGQLLERDLSITFKKKWCRIYHKDKGLIIQS----------RM 424
+ +V FIP+ K NLLS+ L K CRI+ + ++Q +
Sbjct: 324 ILNDVLFIPQFKFNLLSVSSLT--------KSMGCRIWFDETSCVLQDATRELMVGMGKQ 375
Query: 425 SSNRMFAVIATMIAP-TCFSTTIKDES--ELWHKRYGHLGYSGLKILAQKAMVKGLPMLG 481
+N + ++ P T S T+ + +LWHKR GH K+ +++
Sbjct: 376 VANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPSVQ--KLQPMSSLLSFPKQKN 433
Query: 482 ELDKPCEECLKGKQHIDPFPQKSTWRAERKLQLIHSDICGPIKPKSNSQKRYFITFIDDF 541
D C C KQ PF + ++ R LIH D GP +++ RYF+T +DD+
Sbjct: 434 NTDFHCRVCHISKQKHLPFVSHNN-KSSRPFDLIHIDTWGPFSVQTHDGYRYFLTIVDDY 492
Query: 542 CRKTWVYLLSEKSGALESFKKFKLLAEKESGEKLSCLRTDRGGEFNSREFTEFCELNGIK 601
R TWVYLL KS L F + E + + +R+D E N FT+F GI
Sbjct: 493 SRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FTQFYHSKGIV 549
Query: 602 RQLTASYTPQQNGVSERKNRTIMNMVRCMLTEKKVPREFWPEAVNWSVYIQNRSPTIAVK 661
+ TPQQN V ERK++ I+N+ R + + +P +W + + +VY+ NR P ++
Sbjct: 550 PYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILE 609
Query: 662 NITPEECWSGKKPSVNFFRIFGCVAYAHVPDSQRRKLDNRSIKCIYLGSSEESKAYRLYD 721
+ P E + P+ + ++FGC+ YA R K R+ C ++G K Y+L D
Sbjct: 610 DKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLD 669
Query: 722 PVSKKIIINRDVVFDESS----GWDWSSGAEQMEFFDEMVDTNEVSTVPILDEVEHQVHS 777
+ II++R VVF E G D S E+ FF ++ T P+ + V+
Sbjct: 670 LETHSIIVSRHVVFHEELFPFLGSDLSQ--EEQNFFPDLNPTP-----PMQRQSSDHVNP 722
Query: 778 ETNDTSPELEDNGEASVSA-SPGVAEEERERRGRRNVQQ----------PVWMKEFVSGE 826
+ +S E+ + + + P V R+ + +Q P +++F+S +
Sbjct: 723 SDSSSSVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYD 782
Query: 827 DLSDEGVSNFVCADAEYSFVSIHSDPMTYDEAAKSDHWRKAMDLEIQAIERNNTWQLAEL 886
++D ++ C D +P Y EA K WR AM E +E +TW++ L
Sbjct: 783 RINDPYLTFLACLDKT-------KEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSL 835
Query: 887 PKGDKSIGVKWVYKTKLNEKGEIEKHKARLVAKGYAQQQGIDFTEVFAPVARWDTIRTIL 946
P + IG +W++K K N G +E++KARLVA+GY Q++GID+ E F+PVA+ ++++ +L
Sbjct: 836 PADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLL 895
Query: 947 AIAAVRGWNVFQLDVKSAFLHGKIDETVFVDQPQGYQVRGAE----RKVYKLHKALYGLR 1002
+AA ++ QLD+ +AFL+G +DE +++ PQGY R + V +L K+LYGL+
Sbjct: 896 GVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLK 955
Query: 1003 QAPRAWYSRIDSYFQKQGFVRSDSDHTLYVKQGENGLAIIVSLYVDDLIYTGNCELLISE 1062
QA R WY + S GF++S DHT ++K + G+ + V +Y+DD+I N + +
Sbjct: 956 QASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISD-GIFLCVLVYIDDIIIASNNDAAVDI 1014
Query: 1063 FKASMEREFDMSDLGKMSYFLGVEILQNSEGIFMCQSKYAKEVLERFGMKNSNPVRNPVV 1122
K+ M+ F + DLG++ YFLG+EI+++ +GI + Q KYA ++L+ G P P+
Sbjct: 1015 LKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMD 1074
Query: 1123 PGTKLNKRGCGSEVDATQYKQMIGSLMYLTVSRPDLMYSVSLVSRYMEKPTELHVQIVKR 1182
P G V+ Y+++IG LMYL ++RPD+ ++V+ ++++ P + H+Q V +
Sbjct: 1075 PSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYK 1134
Query: 1183 VMRYLNGTVDMGIQYRRSGSMKLISYTDSDYAGDVDDRKSTSGYVFMLGSGSIAWSSKKQ 1242
+++Y+ GT+ G+ Y + ++L Y ++DY D R+STSGY LG I W S+KQ
Sbjct: 1135 ILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQ 1194
Query: 1243 AVVSLSTTEAEFIAAVSCACQCIWLRRILFSLGQVQGKCSTIYCDNSSTIKLSKNPVMHG 1302
VVS S+ EAE+ + + +WL L L K + ++CDN + I ++ N V H
Sbjct: 1195 DVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHE 1254
Query: 1303 RSKHINVRYHFLRDLVRDGRIELVHCSTE 1331
R+KHI H +R+ + G EL H +TE
Sbjct: 1255 RTKHIESDCHSVRERLLKGLFELYHINTE 1283
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,931,066
Number of Sequences: 26719
Number of extensions: 1323475
Number of successful extensions: 4926
Number of sequences better than 10.0: 214
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 3772
Number of HSP's gapped (non-prelim): 544
length of query: 1331
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1220
effective length of database: 8,352,787
effective search space: 10190400140
effective search space used: 10190400140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0112.11