BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0106.7
(717 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43490 hypothetical protein 668 0.0
At3g59570 putative protein 546 e-155
At4g27100 unknown protein 178 8e-45
At5g54780 putative protein 174 2e-43
At4g28550 putative protein 171 1e-42
At2g20440 unknown protein 162 6e-40
At5g41940 GTPase activator protein of Rab-like small GTPases-lik... 123 3e-28
At3g49350 GTPase activating -like protein 120 2e-27
At5g53570 GTPase activator protein of Rab-like small GTPases-lik... 120 3e-27
At5g24390 GTPase activator-like protein of Rab-like small GTPases 117 2e-26
At3g59560 putative protein 112 9e-25
At5g52590 putative protein 108 1e-23
At2g30710 unknown protein 76 8e-14
At4g13730 unknown protein 70 5e-12
At1g04830 unknown protein 66 6e-11
At5g57210 microtubule-associated protein-like 52 1e-06
At3g07890 putative GTPase activator protein 47 4e-05
At4g29950 unknown protein 47 5e-05
At2g19240 hypothetical protein 45 1e-04
At5g15930 plant adhesion molecule 1 (PAM1) 42 0.001
>At2g43490 hypothetical protein
Length = 756
Score = 668 bits (1724), Expect = 0.0
Identities = 371/679 (54%), Positives = 456/679 (66%), Gaps = 41/679 (6%)
Query: 3 CGGEEEKQWSCGKAGSVNFRKVSSIVRDIGDPCLSQSPVKVVVTVNRMLKPDKWQALSDS 62
C G E KQWSCGKAG V+ +KV S+VRD+ +PCLSQS ++VV+T+ +MLKP+KWQA DS
Sbjct: 2 CSGGEGKQWSCGKAGVVSLQKVGSLVRDLSEPCLSQSRIQVVITIGKMLKPEKWQASFDS 61
Query: 63 EGKVLGFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRRRLRAARREHYSDLVK 122
+G+V GF+KALKLI+LGG+DPSIR EVWEFLLGCYALSST+EYR +LR ARR+ Y+DL+K
Sbjct: 62 DGRVSGFQKALKLIILGGIDPSIRAEVWEFLLGCYALSSTSEYRNQLRVARRKRYNDLLK 121
Query: 123 QCQTMHSSVGTGSLAYVVGSKVMDMRTSSKLEREMKGKTSTSN------DNNIEVGKYNE 176
QCQTMHSSVGTGSLAYVVGSKVMDMR S + + +K T+ N DNN N
Sbjct: 122 QCQTMHSSVGTGSLAYVVGSKVMDMRKSYR-DEAVKVATTDENREDAFIDNNDNANTENH 180
Query: 177 RSIICTEAAKEGH---HESSNGSVDLASLRASTDGATYDSYGQQNCSSPNLGRETDGSHC 233
S H SS+ SVDL S R S + Y++ + SSP DG
Sbjct: 181 HSDWSNNGTDTSHLHRRGSSSESVDLVSGRESPESVVYNTSSFVSASSPYGYASPDGY-- 238
Query: 234 VIDSPFDFPALPVPNLFEKSGKDNNSSTEHGSKLSARHRLRFDDE-MHTFQINDNVDLIG 292
FDFP+LPV +LF ++ D + S + LR +DE MH F+I+ N DLI
Sbjct: 239 -----FDFPSLPVTDLFGRNSLDKIEVSTPDEDASLKSELRSEDEGMHNFRIDKNADLIR 293
Query: 293 ESNGQQPRGILHSTNSEIEVASPDEDEPEFPSDNAVYEAQMVNQLKISDVPQPARISAAM 352
E P EI+V D P S A++V+ L+ISDVP+ A +
Sbjct: 294 EQRRSTP---------EIKVMHSDSVGP---SSYTGRNAEIVDGLRISDVPEMASVKDTP 341
Query: 353 SQEWPVGEDRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGY 412
S+ V EDRVSEWLWTLHRIVVDVVRTDSHL+FYED NL RMSDILAVYAWVDPATGY
Sbjct: 342 SRVGNVTEDRVSEWLWTLHRIVVDVVRTDSHLEFYEDPGNLGRMSDILAVYAWVDPATGY 401
Query: 413 CQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGPTRVMKQLRELWHILELADK 472
CQGMSDL+SPFVV+FEDNADAFWCFEML+RR R NFQMEGPT VM QL+ LWHIL++ DK
Sbjct: 402 CQGMSDLVSPFVVLFEDNADAFWCFEMLIRRTRANFQMEGPTGVMDQLQSLWHILQITDK 461
Query: 473 EMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWAADFDESLAYDLEVNCLE 532
++F+HLS+IGAESLHFAFRMLLVLFRRELSFNEAL MWEMMWAAD+DES+ LE +CLE
Sbjct: 462 DIFSHLSRIGAESLHFAFRMLLVLFRRELSFNEALRMWEMMWAADYDESVTETLENDCLE 521
Query: 533 ALDIHLPRDSSNDLREEVADSDDGS--------VKSGSQSNHNENDNDNTKASQQSNHEN 584
L I LPR S ++ EE+ + G+ KSG S + + + +
Sbjct: 522 PLVIQLPRKSEPEVSEEMIEDGIGNSTKREPMISKSGPISKSSGLLSRSGLLPKSGPLPK 581
Query: 585 TDVSVWD-AKLKSL-SSYPFCGLARNMWPRNGR-VQMSTMSSLTRKEKDELAIFCVAAIL 641
T D +++KS SSY FCGL R++W RN R + + S +K D L +FCVAAIL
Sbjct: 582 TAGPFSDESEIKSASSSYHFCGLTRSLWSRNDRTTHVPCVVSSIKKGDDALPVFCVAAIL 641
Query: 642 VLNRQKVIRETHSFDDMIK 660
++NR K+++ET S DDMI+
Sbjct: 642 IMNRHKIMKETRSIDDMIQ 660
>At3g59570 putative protein
Length = 549
Score = 546 bits (1406), Expect = e-155
Identities = 295/512 (57%), Positives = 361/512 (69%), Gaps = 14/512 (2%)
Query: 5 GEEEKQWSCGKAGSVNFRKVSSIVRDIGDPCLSQSPVKVVVTVNRMLKPDKWQALSDSEG 64
G K+W+ KAG V+ +KV+S+VRD+ +PCLSQS ++VV+T+ +MLKP+KWQAL D +G
Sbjct: 30 GGRGKKWTRRKAGLVSLQKVASLVRDLREPCLSQSRIQVVLTIGKMLKPEKWQALFDGDG 89
Query: 65 KVLGFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRRRLRAARREHYSDLVKQC 124
KV F KALKLI+LGG+DPSIR EVWEFLLGCYALSST+EYR +LR ARRE Y++L+KQC
Sbjct: 90 KVSSFHKALKLIILGGIDPSIRAEVWEFLLGCYALSSTSEYRTQLRVARRERYNELLKQC 149
Query: 125 QTMHSSVGTGSLAYVVGSKVMDMRTSSKLE---REMKGKTSTSNDNNIEVGKYNERSIIC 181
Q MHS+VGTGSLAYVVGSKVMDMR S K E ++ D + + + S
Sbjct: 150 QMMHSTVGTGSLAYVVGSKVMDMRKSYKNEVVKEDIDESREACLDGHENTDNHGDWSNND 209
Query: 182 TEAAKEGHHESSNGSVDLASLRASTDGATYDSYGQQNCSSPNLGRETDGSHCVIDSPFDF 241
TE + SS+ SVDL S D Y++ SSP G + G D FDF
Sbjct: 210 TEKSPVRRSGSSSESVDLVS----PDSTIYETSSFVPPSSP-YGFPSPGPFA--DDIFDF 262
Query: 242 PALPVPNLFEKSGKDNNSSTEHGSKLSARHRLRFDDE-MHTFQINDNVDLIGESNGQQPR 300
P+LPV +LF +S + + S + LR +DE MH+F+I+ N DL+ E +G
Sbjct: 263 PSLPVTDLFGRSSLGKKGLSTPDEETSTQSDLRSEDERMHSFRIDKNADLVIEPHGSSYN 322
Query: 301 GILHSTNSEIEVASPDEDEPEFPSDNAVYEAQMVNQLKISDVPQPARISAAMSQEWPVGE 360
+ S NSEIEV E ++V +++V+ L+ISDVP+ ++ V E
Sbjct: 323 DVTASINSEIEVVHLQSVEK---LSHSVCTSEIVDGLRISDVPETPSARETHTRGGTVKE 379
Query: 361 DRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLL 420
DRVSEWLWTLHRIVVDVVRTDSHL+FYED NL RMSDILAVYAWVDPATGYCQGMSDL+
Sbjct: 380 DRVSEWLWTLHRIVVDVVRTDSHLEFYEDPGNLGRMSDILAVYAWVDPATGYCQGMSDLV 439
Query: 421 SPFVVIFEDNADAFWCFEMLLRRMRENFQMEGPTRVMKQLRELWHILELADKEMFAHLSK 480
SPFV +FEDNADAFWCFEML+RR R NFQMEGPT VM QL+ LW IL+L DKEMF+HLS+
Sbjct: 440 SPFVFLFEDNADAFWCFEMLIRRTRANFQMEGPTGVMDQLQSLWRILQLTDKEMFSHLSR 499
Query: 481 IGAESLHFAFRMLLVLFRRELSFNEALSMWEM 512
IGAESLHFAFRMLLVLFRRELSFN+AL MWE+
Sbjct: 500 IGAESLHFAFRMLLVLFRRELSFNKALRMWEV 531
>At4g27100 unknown protein
Length = 436
Score = 178 bits (452), Expect = 8e-45
Identities = 86/171 (50%), Positives = 115/171 (66%), Gaps = 1/171 (0%)
Query: 360 EDRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDL 419
+ ++ +WL TLH+I +DV RTD L FYE NL+++ DIL+VYAW+D GYCQGMSDL
Sbjct: 163 DKKIIQWLLTLHQIGLDVNRTDRALVFYEKKENLSKLWDILSVYAWIDNDVGYCQGMSDL 222
Query: 420 LSPFVVIFEDNADAFWCFEMLLRRMRENFQMEG-PTRVMKQLRELWHILELADKEMFAHL 478
SP +++ ED ADAFWCFE L+RR+R NF+ G V QL L I ++ D ++ HL
Sbjct: 223 CSPMIILLEDEADAFWCFERLMRRLRGNFRSTGRSVGVEAQLTHLSSITQVVDPKLHQHL 282
Query: 479 SKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWAADFDESLAYDLEVN 529
K+G FA RML+V FRRE SF ++L +WEMMWA ++D L Y E +
Sbjct: 283 DKLGGGDYLFAIRMLMVQFRREFSFCDSLYLWEMMWALEYDPDLFYVYEAH 333
Score = 73.9 bits (180), Expect = 3e-13
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 35 CLSQSPVKVVVTVNRMLKPDKWQALSDSEGKVLGFRKALKLIVLGGVDPSIRPEVWEFLL 94
C + + + L KWQA+ EG L K L+ I GG+ PSIR EVWEFLL
Sbjct: 19 CTDVPKTRFKIKPGKTLSVRKWQAVFVQEGS-LHIGKTLRRIRRGGIHPSIRGEVWEFLL 77
Query: 95 GCYALSSTAEYRRRLRAARREHYSDLVKQCQTMHSSVGTG 134
GCY ST E R ++R RR Y+ ++C+ M +G+G
Sbjct: 78 GCYDPMSTFEEREQIRQRRRLQYASWKEECKQMFPVIGSG 117
>At5g54780 putative protein
Length = 435
Score = 174 bits (440), Expect = 2e-43
Identities = 93/213 (43%), Positives = 125/213 (58%), Gaps = 15/213 (7%)
Query: 360 EDRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDL 419
+ +V +WL TLH+I +DV RTD L FYE NL+++ DILA+YAW+D GYCQGMSDL
Sbjct: 161 DQKVIQWLLTLHQIGLDVNRTDRTLVFYEKKENLSKLWDILALYAWIDNDVGYCQGMSDL 220
Query: 420 LSPFVVIFEDNADAFWCFEMLLRRMRENFQMEG-PTRVMKQLRELWHILELADKEMFAHL 478
SP +++ ED ADAFWCFE L+RR+R NF+ G V QL L I ++ D ++ HL
Sbjct: 221 CSPMIMLLEDEADAFWCFERLMRRLRGNFRDTGRSVGVEAQLTHLASITQIIDPKLHHHL 280
Query: 479 SKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWAADFDESLAYDLEVNCLEALDIHL 538
K+G FA RM++V FRRE SF ++L +WEMMWA ++D + E E
Sbjct: 281 EKLGGGDYLFAIRMIMVQFRREFSFCDSLYLWEMMWALEYDPEMYSLYEEPQFEG----- 335
Query: 539 PRDSSNDLREEVADSDDGSVKSGSQSNHNENDN 571
E + S G KS +Q E +N
Sbjct: 336 ---------ERIEGSSKGKPKSINQCGKYEREN 359
Score = 75.1 bits (183), Expect = 1e-13
Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 35 CLSQSPVKVVVTVNRMLKPDKWQALSDSEGKVLGFRKALKLIVLGGVDPSIRPEVWEFLL 94
C K + + L KWQA +EG L K L I GG+ PSIR EVWEFLL
Sbjct: 19 CTDVPNTKFKIKPGKTLSVRKWQAAFTTEG-FLDIGKTLSRIQRGGIHPSIRGEVWEFLL 77
Query: 95 GCYALSSTAEYRRRLRAARREHYSDLVKQCQTMHSSVGTG 134
GCY ST E R ++R RR Y+ ++C+ M +G+G
Sbjct: 78 GCYDPKSTFEEREQIRQRRRLQYASWKEECKQMFPVIGSG 117
>At4g28550 putative protein
Length = 424
Score = 171 bits (434), Expect = 1e-42
Identities = 92/245 (37%), Positives = 138/245 (55%), Gaps = 9/245 (3%)
Query: 328 VYEAQMVNQLKISDVPQPARISAAMSQEWPVG----EDRVSEWLWTLHRIVVDVVRTDSH 383
V + V +++ QP S+ +QEW V + RV +W+ L +I +DVVRTD +
Sbjct: 121 VGSGKFVTMAVVAEDGQPLEESSVDNQEWVVKTAITDKRVLQWMLVLSQIGLDVVRTDRY 180
Query: 384 LDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRR 443
L FYE N AR+ DIL++Y W++P GY QGM+D+ SP +++ ED ADAFWCFE +RR
Sbjct: 181 LCFYESESNQARLWDILSIYTWLNPDIGYVQGMNDICSPMIILLEDEADAFWCFERAMRR 240
Query: 444 MRENFQMEGPTR-VMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELS 502
+RENF+ + V QL L +++ D + HL + FA RML+VLFRRE S
Sbjct: 241 LRENFRTTATSMGVQTQLGMLSQVIKTVDPRLHQHLEDLDGGEYLFAIRMLMVLFRREFS 300
Query: 503 FNEALSMWEMMWAADFDESLAYDLEVNCLEALDIHLPRDSSNDLREEVADSDDGSVKSGS 562
F +AL +WE+MWA +++ + E E +++ L ++ + +KSG
Sbjct: 301 FLDALYLWELMWAMEYNPNKFASYE----EPQNMNNSSGQDPRLLKQYGKFERKYIKSGQ 356
Query: 563 QSNHN 567
HN
Sbjct: 357 NEQHN 361
Score = 69.3 bits (168), Expect = 7e-12
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 31 IGDPCLSQSP-VKVVVTVNRMLKPDKWQALSDSEGKVLGFRKALKLIVLGGVDPSIRPEV 89
+ + C++ P + + L KW A +G L + L+ I GG+ PSI+ EV
Sbjct: 21 VREECVADVPRTRFKSRAGKTLSARKWHAAFTGDGH-LDMERVLRRIQRGGIHPSIKGEV 79
Query: 90 WEFLLGCYALSSTAEYRRRLRAARREHYSDLVKQCQTMHSSVGTGSLA--YVVGSKVMDM 147
WEFLLG Y ST E R +LR RRE Y ++C+ M VG+G VV +
Sbjct: 80 WEFLLGAYDPDSTFEERNKLRNHRREQYYAWKEECKNMVPLVGSGKFVTMAVVAEDGQPL 139
Query: 148 RTSSKLEREMKGKTSTSN 165
SS +E KT+ ++
Sbjct: 140 EESSVDNQEWVVKTAITD 157
Score = 30.0 bits (66), Expect = 4.7
Identities = 11/47 (23%), Positives = 28/47 (59%)
Query: 614 GRVQMSTMSSLTRKEKDELAIFCVAAILVLNRQKVIRETHSFDDMIK 660
G+ + + S ++ + LA+F VA++L +++++E DD+++
Sbjct: 345 GKFERKYIKSGQNEQHNTLAVFVVASVLETKNKRLLKEAKGLDDVVQ 391
>At2g20440 unknown protein
Length = 371
Score = 162 bits (410), Expect = 6e-40
Identities = 82/197 (41%), Positives = 125/197 (62%), Gaps = 9/197 (4%)
Query: 334 VNQLKISDVPQPARISAAMSQEW----PVGEDRVSEWLWTLHRIVVDVVRTDSHLDFYED 389
V + + P S+ +Q W V ++RV +W+ +LH+I +DV RTD +L FYE+
Sbjct: 11 VTMAVVQENGNPIDESSVENQGWIVKNTVTDERVLQWMLSLHQIGLDVARTDRYLCFYEN 70
Query: 390 TRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQ 449
RN +++ D+LA+Y W++ GY QGM+D+ SP +++F+D DAFWCFE +RR+RENF+
Sbjct: 71 DRNQSKLWDVLAIYTWLNLDIGYVQGMNDICSPMIILFDDEGDAFWCFERAMRRLRENFR 130
Query: 450 MEGPTR-VMKQLRELWHILELADKEMFAHLSK---IGAESLHFAFRMLLVLFRRELSFNE 505
+ V QL L +++ D + HL K G E L FA RML+VLFRRE SF +
Sbjct: 131 ATATSMGVQTQLGVLSQVIKTVDPRLHQHLGKKDLDGGEYL-FAIRMLMVLFRREFSFLD 189
Query: 506 ALSMWEMMWAADFDESL 522
AL +WE+MWA +++ ++
Sbjct: 190 ALYLWELMWAMEYNPTM 206
Score = 31.6 bits (70), Expect = 1.6
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 622 SSLTRKEKDELAIFCVAAILVLNRQKVIRETHSFDDMIKASALIF 666
S + ++ LA+F VA++L +++++E DD+++ IF
Sbjct: 239 SGQNEQHRNTLAVFVVASVLQTKNKRLLKEAKGLDDVVQVCLCIF 283
>At5g41940 GTPase activator protein of Rab-like small GTPases-like
protein
Length = 506
Score = 123 bits (309), Expect = 3e-28
Identities = 74/213 (34%), Positives = 114/213 (52%), Gaps = 7/213 (3%)
Query: 307 NSEIEVASPDEDEPEFPSDNAVYEAQMVNQLKISDVPQPARISAAMSQ-EW-PVGEDRVS 364
N E+E + E E S ++ ++Q ++ +S + R+ A + EW P + +
Sbjct: 213 NEEVESHNTVNQEKEISSPSSKPKSQAADEDFMSTWQRIIRLDAVRANDEWVPYSPTQAA 272
Query: 365 EWLWTLHRIVVDVVRTDSHLDFYEDTR--NLARMSDILAVYAWVDPATGYCQGMSDLLSP 422
I + V D D E R + AR+ IL YA DP GYCQGMSDLLSP
Sbjct: 273 VSETKARGIAIQVGLND--YDHLEPCRIFHAARLVGILEAYAVYDPEIGYCQGMSDLLSP 330
Query: 423 FVVIFEDNADAFWCFEMLLRRMRENFQMEGPTRVMKQLRELWHILELADKEMFAHLSKIG 482
+ + ED+ AFWCF + + R NF+++ + +QL + I++ D ++ HL +
Sbjct: 331 LIAVMEDDVLAFWCFVGFMSKARHNFRLD-EVGIRRQLSMVSKIIKFKDIHLYRHLENLE 389
Query: 483 AESLHFAFRMLLVLFRRELSFNEALSMWEMMWA 515
AE F +RM++VLFRREL+F + L +WE+MWA
Sbjct: 390 AEDCFFVYRMVVVLFRRELTFEQTLCLWEVMWA 422
Score = 76.3 bits (186), Expect = 6e-14
Identities = 56/189 (29%), Positives = 93/189 (48%), Gaps = 14/189 (7%)
Query: 49 RMLKPDKWQALSDSEGKVL-GFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRR 107
R+L+P +W A EG++ G K LK + GGV PSIRPEVW FLLG Y L S E R
Sbjct: 44 RVLQPKQWNAFFTEEGRLSDGGVKFLKKVRSGGVHPSIRPEVWPFLLGVYDLKSNKEERD 103
Query: 108 RLRAARREHYSDLVKQCQTMH-------SSVGTGSLAYVVGSKVMDMRTSSKLEREMK-- 158
+R + Y +L +QC+ +H S T + S+V++ ++E +
Sbjct: 104 SIRQLKLTEYENLRRQCREIHERYENVCDSKETAQSSNTEDSQVLESHDIEEVESSTRTI 163
Query: 159 --GKTSTSNDNNIEVGKYNERSIICTEAAKEGHHESSN-GSVDLASLRASTDGATYDSYG 215
++ N +I + E+S + TE A +S+N + + A+ + ++++
Sbjct: 164 TVDESEKLNSESIMQDENCEKSDVTTEDAAGNDSDSTNPEETETSPFLANEEVESHNTVN 223
Query: 216 QQ-NCSSPN 223
Q+ SSP+
Sbjct: 224 QEKEISSPS 232
>At3g49350 GTPase activating -like protein
Length = 554
Score = 120 bits (302), Expect = 2e-27
Identities = 84/286 (29%), Positives = 135/286 (46%), Gaps = 56/286 (19%)
Query: 267 LSARHRLRFDDEMHTFQINDNVDLIGE-------SNGQQPRGILHSTNSEIEVASPDEDE 319
+SAR L D++ I +++ + E +G R I ++T S + S D D
Sbjct: 199 VSARESLSSDED-----ITEDIGYMSEVSCTVERDDGSSSRRITNATISTLNSESSDSDS 253
Query: 320 PEFPSDNAVYEAQMVNQLKISDVPQPARISAAMSQEWPVGEDRVSEWLWTLHRIV-VDVV 378
+ E+++V + S P A S ED V T RI+ +D V
Sbjct: 254 SD--------ESEVVQVFQSSATPDVNSTYPASSSIPRTEEDFV-----TWQRIIRLDAV 300
Query: 379 RTDSHLDFYEDTRNL-----------------------------ARMSDILAVYAWVDPA 409
R DS Y ++ + AR+ +L YA DP
Sbjct: 301 RADSEWTSYSPSQAVISEDRACRAAEAVGLKDYNHLEPYKIFQAARLVAVLEAYALYDPD 360
Query: 410 TGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGPTRVMKQLRELWHILEL 469
GYCQGMSDLLSP + + D+ + FWCF +++ R NF+++ + +QL + I++
Sbjct: 361 IGYCQGMSDLLSPILSVIPDDHEVFWCFVGFMKKARHNFRLD-EVGIRRQLNIVSKIIKS 419
Query: 470 ADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWA 515
D +++ HL K+ AE F +RM++V+FRREL+ ++ L +WE+MWA
Sbjct: 420 KDSQLYRHLEKLQAEDCFFVYRMVVVMFRRELTLDQTLCLWEVMWA 465
Score = 52.0 bits (123), Expect = 1e-06
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 29/191 (15%)
Query: 49 RMLKPDKWQALSDSEGKVL-GFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRR 107
R L+P +W+ +G++ G LK + G++PSIR EVW FLLG Y +S+ E R
Sbjct: 67 RPLRPQQWKRFFTPDGRLRNGGVDLLKKVRSRGIEPSIRLEVWPFLLGLYGFNSSKEERV 126
Query: 108 RLRAAR---------------REHYSDLVKQCQTMHSSVGTGSLAYVVGSKVMDM----- 147
+R R R+ Y L +QC+ + Y + D
Sbjct: 127 TIRNRRSSFFDSLAHRFCYKCRKEYERLRRQCKRLQKHNNGTRKLYNGSETIQDEYDWPR 186
Query: 148 ---RTSSKLEREMKGKTSTSNDNNI--EVGKYNERSIICTEAAKEGHHESSNGSVDLASL 202
SS + + + S S+D +I ++G +E + CT +G + +++L
Sbjct: 187 VQDTDSSCSDEVVSARESLSSDEDITEDIGYMSE--VSCTVERDDGSSSRRITNATISTL 244
Query: 203 RA-STDGATYD 212
+ S+D + D
Sbjct: 245 NSESSDSDSSD 255
>At5g53570 GTPase activator protein of Rab-like small GTPases-like
protein
Length = 550
Score = 120 bits (301), Expect = 3e-27
Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 394 ARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGP 453
AR+ IL YA DP GYCQGMSDLLSP + + ++ +AFWCF +++ R NF+++
Sbjct: 338 ARLVAILEAYAMYDPEIGYCQGMSDLLSPILAVISEDHEAFWCFVGFMKKARHNFRLD-E 396
Query: 454 TRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMM 513
+ +QL + I++ D +++ HL + AE F +RM+LV+FRRELSF + L +WE+M
Sbjct: 397 AGIQRQLSIVSKIIKNKDSQLYKHLENLQAEDCSFVYRMVLVMFRRELSFEQTLCLWEVM 456
Query: 514 WA 515
WA
Sbjct: 457 WA 458
Score = 67.4 bits (163), Expect = 3e-11
Identities = 40/89 (44%), Positives = 54/89 (59%), Gaps = 8/89 (8%)
Query: 51 LKPDKWQALSDSEGKV----LGFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYR 106
L P +W++L EGK+ +GF LK + GVDPSIR EVW FLLG Y L+ST+E R
Sbjct: 96 LTPHQWRSLFTPEGKLRDGGVGF---LKKVRSRGVDPSIRAEVWLFLLGVYDLNSTSEER 152
Query: 107 RRLRAARREHYSDLVKQCQTMHSSVGTGS 135
++ +R+ Y L ++CQ M G GS
Sbjct: 153 EAVKTQKRKEYEKLQRRCQ-MLLKCGNGS 180
>At5g24390 GTPase activator-like protein of Rab-like small GTPases
Length = 528
Score = 117 bits (293), Expect = 2e-26
Identities = 52/122 (42%), Positives = 82/122 (66%), Gaps = 1/122 (0%)
Query: 394 ARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGP 453
AR+ +L YA DP GYCQGMSDLLSP + + D+ +AFWCF +++ R+NF+++
Sbjct: 317 ARLVAVLEAYALHDPEIGYCQGMSDLLSPILSVIPDDYEAFWCFVGFMKKARQNFRVD-E 375
Query: 454 TRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMM 513
+ +QL + I++ D +++ HL K+ AE F +RM+LV+FRREL+ + L +WE++
Sbjct: 376 VGITRQLNIVSKIIKSKDSQLYKHLEKVKAEDCFFVYRMVLVMFRRELTLEQTLHLWEVI 435
Query: 514 WA 515
WA
Sbjct: 436 WA 437
Score = 55.5 bits (132), Expect = 1e-07
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 55 KWQALSDSEGKVL-GFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRRRLRAAR 113
+W+ EG++ G LK + G+DPSIR EVW FLLG +S+ E R R R
Sbjct: 67 RWRRCFTPEGRIRNGGVDLLKKVRTRGIDPSIRSEVWPFLLGVCDFNSSEEERGATRTWR 126
Query: 114 REHYSDLVKQCQTMH-SSVGTGSLAYVVGSKVMDMRTSSKLEREMKGKTS---------- 162
R+ Y L +QC+ + + GT L + + D S L ++ + S
Sbjct: 127 RKVYERLRRQCKRLQKQNSGTFKLNKINKTTQDDEHDSWSLAQDSESSCSDDACSVHESL 186
Query: 163 -TSNDNNIEVGKYNERSIICTEAAKEGHHESSNGSVDLASLRASTDGATYDSYGQ 216
+ DN ++G ++ + CT NGS L S + +D + + Y Q
Sbjct: 187 ISDKDNTEDIGYMSD--VSCT------LDRDYNGSRHLNSESSDSDSSDENDYVQ 233
>At3g59560 putative protein
Length = 238
Score = 112 bits (279), Expect = 9e-25
Identities = 60/155 (38%), Positives = 86/155 (54%), Gaps = 6/155 (3%)
Query: 512 MMWAADFDESLAYDLEVNCLEALDIHLPRDSSNDLREEVADSDDGSVKSGSQSNHNENDN 571
MMWAADFDES A LE +CL+ L + LP+ S D+ + D +G+ + ++ ++ +
Sbjct: 1 MMWAADFDESFAETLEKDCLKPLVVQLPKRSGVDMGDHKIDDGNGTTTNSESTSKSDRTS 60
Query: 572 DNTKAS------QQSNHENTDVSVWDAKLKSLSSYPFCGLARNMWPRNGRVQMSTMSSLT 625
++ S + T D +K SY CGL RN+W RN R S + S
Sbjct: 61 KSSLLSKSGLLPESGPLPKTGPLSDDFGMKPAGSYSLCGLTRNLWSRNERTHASCVVSSC 120
Query: 626 RKEKDELAIFCVAAILVLNRQKVIRETHSFDDMIK 660
K D L +FCVAAIL++NR K+++ET S DDMIK
Sbjct: 121 GKGDDPLPVFCVAAILIMNRHKIMKETRSIDDMIK 155
>At5g52590 putative protein
Length = 338
Score = 108 bits (270), Expect = 1e-23
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 350 AAMSQEW----PVGEDRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLA--RMSDILAVY 403
A + Q+W P R +++ I DVVRTD ++YE NL M DIL Y
Sbjct: 77 ATLKQQWQSISPEQAKRFTKYRERKGLIDKDVVRTDRAFEYYEGDDNLHVNSMRDILLTY 136
Query: 404 AWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLLRRMRENFQMEGPTRVMKQLREL 463
++ + GYCQGMSD LSP + + ED +++FWCF L+ R+ NF + + QL L
Sbjct: 137 SFYNFDLGYCQGMSDYLSPILFVMEDESESFWCFVALMERLGPNFNRD-QNGMHTQLFAL 195
Query: 464 WHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMW 514
++EL D + + + + F FR +L+ F+RE + + + +WE+MW
Sbjct: 196 SKLVELLDSPLHNYFKENDCLNYFFCFRWILIQFKREFEYEKTMQLWEVMW 246
Score = 57.8 bits (138), Expect = 2e-08
Identities = 29/73 (39%), Positives = 45/73 (60%)
Query: 55 KWQALSDSEGKVLGFRKALKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRRRLRAARR 114
++ AL DSEG+V+ + + + GG++ +R EVW FLLG YA ST R LR+ +R
Sbjct: 14 EFTALLDSEGRVVESKALRERVFYGGIEHQLRREVWPFLLGYYAYDSTYAEREYLRSVKR 73
Query: 115 EHYSDLVKQCQTM 127
Y+ L +Q Q++
Sbjct: 74 MEYATLKQQWQSI 86
>At2g30710 unknown protein
Length = 440
Score = 75.9 bits (185), Expect = 8e-14
Identities = 52/176 (29%), Positives = 85/176 (47%), Gaps = 28/176 (15%)
Query: 361 DRVSEWLWTLHRIVVDVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLL 420
+R + + L +I VD RT + F++ + + IL +A PA+GY QG++DL+
Sbjct: 192 ERSDDEINMLRQIAVDCPRTVPDVSFFQQEQVQKSLERILYTWAIRHPASGYVQGINDLV 251
Query: 421 SPFVVIF-----------------------EDNADAFWCFEMLLRRMREN--FQMEGPTR 455
+PF+VIF + AD +WC LL M+++ F G R
Sbjct: 252 TPFLVIFLSEYLDGGVDSWSMDDLSAEKVSDVEADCYWCLTKLLDGMQDHYTFAQPGIQR 311
Query: 456 VMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWE 511
++ +L+EL + D+ + H+ + G E L FAFR L RE+ FN +W+
Sbjct: 312 LVFKLKEL---VRRIDEPVSRHMEEHGLEFLQFAFRWYNCLLIREIPFNLINRLWD 364
>At4g13730 unknown protein
Length = 449
Score = 69.7 bits (169), Expect = 5e-12
Identities = 47/165 (28%), Positives = 89/165 (53%), Gaps = 23/165 (13%)
Query: 370 LHRIVVDVVRTDSHLDFYEDTRNLAR-----MSDILAVYAWVDPATGYCQGMSDLLSPFV 424
L +I DV+RT + F+ +A+ + +IL ++A ++P Y QGM+++L+P
Sbjct: 228 LEQIERDVMRTHPDMHFFSGDSAVAKSNQDALKNILTIFAKLNPGIRYVQGMNEILAPIF 287
Query: 425 VIFEDN----------ADAFWCFEMLLRRMRENFQMEGPTRVM---KQLRELWHILELAD 471
IF+++ +DAF+CF L+ R+NF + V+ + L +L+ D
Sbjct: 288 YIFKNDPDKGNAAYAESDAFFCFVELMSGFRDNFCQQLDNSVVGIRYTITRLSLLLKHHD 347
Query: 472 KEMFAHL---SKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMM 513
+E++ HL +KI + +AFR + +L +E +F E+L +W+ +
Sbjct: 348 EELWRHLEVTTKINPQ--FYAFRWITLLLTQEFNFVESLHIWDTL 390
>At1g04830 unknown protein
Length = 448
Score = 66.2 bits (160), Expect = 6e-11
Identities = 46/166 (27%), Positives = 85/166 (50%), Gaps = 23/166 (13%)
Query: 369 TLHRIVVDVVRTDSHLDFYEDTRNLAR-----MSDILAVYAWVDPATGYCQGMSDLLSPF 423
T+ +I DV RT + F+ + AR M +IL V+A ++ Y QGM+++L+P
Sbjct: 223 TIEQIDRDVKRTHPDIPFFSGESSFARSNQESMKNILLVFAKLNQGIRYVQGMNEILAPI 282
Query: 424 VVIFEDN----------ADAFWCFEMLLRRMRENFQMEGPTRVM---KQLRELWHILELA 470
+F ++ ADAF+CF LL R+ + + V+ + L ++
Sbjct: 283 FYVFRNDPDEDSSSHAEADAFFCFVELLSGFRDFYCQQLDNSVVGIRSAITRLSQLVRKH 342
Query: 471 DKEMFAHL---SKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMM 513
D+E++ HL +K+ + +AFR + +L +E SF ++L +W+ +
Sbjct: 343 DEELWRHLEITTKVNPQ--FYAFRWITLLLTQEFSFFDSLHIWDAL 386
>At5g57210 microtubule-associated protein-like
Length = 737
Score = 52.0 bits (123), Expect = 1e-06
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 447 NFQMEGPTRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEA 506
N + G V++ L+H+L L D + +HL ++G E +FA R L VLF RE +
Sbjct: 305 NDSITGLPPVIEASGALYHLLSLVDASLHSHLVELGVEPQYFALRWLRVLFGREFPLSNL 364
Query: 507 LSMWEMMWAADFDE 520
L +W+ +++AD E
Sbjct: 365 LIVWDEIFSADNSE 378
>At3g07890 putative GTPase activator protein
Length = 400
Score = 47.0 bits (110), Expect = 4e-05
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 24/238 (10%)
Query: 376 DVVRTDSHLDFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFW 435
D+ RT + + A + +L Y++ D GYCQG++ + + +++ + DAFW
Sbjct: 165 DLPRTFPGHPWLDTPEGHAALRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFW 224
Query: 436 CFEMLLRR--MRENFQMEGPTRVMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRML 493
+LL +R+ + ++Q R +L + HL +G + A
Sbjct: 225 MLAVLLENVLVRDCYTTNLSGCHVEQ-RVFKDLLAQKCSRIATHLEDMGFDVSLVATEWF 283
Query: 494 LVLFRRELSFNEALSMWEMMWAAD----FDESLA-YDLEVNCLEALDIHLPRDSSNDLRE 548
L LF + L L +W++++ F +LA + ++ N E L H D N L++
Sbjct: 284 LCLFSKSLPSETTLRVWDVLFYEGAKVLFHAALAIFKMKEN--ELLMTHQVGDVINILQK 341
Query: 549 ---EVADSDD----GSVKSGSQSNHNENDNDNTKASQQSNHENTDVSVWDAKLKSLSS 599
++ D D+ K GS + NT + Q+ E ++ D +L+ L+S
Sbjct: 342 TSHQLFDPDELLTVAFEKIGSMTT-------NTISKQRKKQEPAVMAELDQRLRRLNS 392
Score = 30.8 bits (68), Expect = 2.8
Identities = 18/55 (32%), Positives = 25/55 (44%), Gaps = 9/55 (16%)
Query: 73 LKLIVLGGVDPSIRPEVWEFLLGCYALSSTAEYRRRLRAARREHYSDLVKQCQTM 127
LK ++ G+ P +RP+VW L G ST +YSDL K + M
Sbjct: 109 LKRLIRKGIPPVLRPKVWFSLSGAAKKKSTVP---------ESYYSDLTKAVEGM 154
>At4g29950 unknown protein
Length = 828
Score = 46.6 bits (109), Expect = 5e-05
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 456 VMKQLRELWHILELADKEMFAHLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWA 515
V++ +H+L D + +HL ++G E +F R L VLF RE + L +W+ +++
Sbjct: 293 VLEASTAFYHLLSFVDSSLHSHLVELGVEPQYFGLRWLRVLFGREFLLQDLLIVWDEIFS 352
Query: 516 AD 517
AD
Sbjct: 353 AD 354
>At2g19240 hypothetical protein
Length = 840
Score = 45.1 bits (105), Expect = 1e-04
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 432 DAFWCFEMLLRRMRENFQME-------------GPTRVMKQLRELWHILELADKEMFAHL 478
DA+ F+ L+ + F M G T V++ + IL + D + +HL
Sbjct: 258 DAYCMFDALMSGIHGCFAMASFFSYSPASGSHTGLTPVLEACSAFYRILAVVDSSLHSHL 317
Query: 479 SKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWAAD 517
++G E +F R L VLF RE + L +W+ + AD
Sbjct: 318 VELGVEPQYFGLRWLRVLFGREFLLQDLLLVWDEIILAD 356
>At5g15930 plant adhesion molecule 1 (PAM1)
Length = 356
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 7/149 (4%)
Query: 373 IVVDVVRTDSHLDFYEDTRNLARMS--DILAVYAWVDPATGYCQGMSDLLSPFVVIFEDN 430
I+ D+ RT F++ + S ++L Y+ D GY QGM ++ ++++
Sbjct: 127 IIRDISRTFPSHVFFQKRHGPGQRSLYNVLKAYSVYDRDVGYVQGMG-FIAGLLLLYMSE 185
Query: 431 ADAFWCFEMLLR----RMRENFQMEGPTRVMKQLRELWHILELADKEMFAHLSKIGAESL 486
DAFW LL+ E G V + L + ++ ++ H ++
Sbjct: 186 EDAFWLLVALLKGAVHSPIEGLYQAGLPLVQQYLLQFDQLVRELMPKLGEHFTQEMINPS 245
Query: 487 HFAFRMLLVLFRRELSFNEALSMWEMMWA 515
+A + + +F L F+ AL +W++ A
Sbjct: 246 MYASQWFITVFSYSLPFHSALRIWDVFLA 274
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,526,977
Number of Sequences: 26719
Number of extensions: 720112
Number of successful extensions: 2674
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2567
Number of HSP's gapped (non-prelim): 95
length of query: 717
length of database: 11,318,596
effective HSP length: 106
effective length of query: 611
effective length of database: 8,486,382
effective search space: 5185179402
effective search space used: 5185179402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0106.7