BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0103.10
(418 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30710 putative protein 35 0.059
At1g35050 putative protein 32 0.85
At1g18610 unknown protein 32 0.85
At4g14910 imidazoleglycerol-phosphate dehydratase 31 1.1
At4g32551 Leunig protein 30 1.9
At3g58620 putative protein 30 1.9
At3g50580 proline-rich protein 30 1.9
At4g32640 putative protein 30 2.5
At1g70460 putative protein kinase 30 2.5
At5g66850 MAP protein kinase like protein 30 3.2
At1g26150 Pto kinase interactor, putative 30 3.2
At5g65620 oligopeptidase A 29 4.2
At5g33310 putative protein 29 4.2
At5g32590 putative protein 29 4.2
At4g32710 putative protein kinase 29 4.2
At1g20110 unknown protein 29 5.5
At4g13340 extensin-like protein 28 7.2
At1g62760 hypothetical protein 28 7.2
At5g38640 Unknown protein (At5g38640; MBB18.19) 28 9.4
At2g04038 bZip transcription factor AtbZip48 28 9.4
>At4g30710 putative protein
Length = 644
Score = 35.4 bits (80), Expect = 0.059
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 266 SPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSP--LGPNLTSSANAPPPPVHTSTLSSG 323
SP + + T AQ L GSL R T+ ++ L P L + + P P TS LSS
Sbjct: 276 SPTKSEDNNIARTSGAQRLLSAGSLDRATLATAVARLHP-LPAPGSRPASPSRTSFLSSS 334
Query: 324 SVSRGFSCS 332
S+SRG S S
Sbjct: 335 SISRGMSTS 343
>At1g35050 putative protein
Length = 450
Score = 31.6 bits (70), Expect = 0.85
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 215 THRADEELLAAFEKKNNVSFPPRINLKGDKASLLRIQAGRKRPLGEEDPRPSPKR 269
T + + + A + V P + L G K + ++Q R RP+ +D P K+
Sbjct: 12 TRKVTKSYIPAANAPSRVEIPSELELDGSKINEPKVQLKRGRPIDSKDKNPQKKK 66
>At1g18610 unknown protein
Length = 574
Score = 31.6 bits (70), Expect = 0.85
Identities = 23/80 (28%), Positives = 41/80 (50%), Gaps = 4/80 (5%)
Query: 254 RKRPL---GEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLGPNLTSSANA 310
RKRP G++D R R + + + ++ ++G + IS+PLG N+T+ A A
Sbjct: 451 RKRPAMSNGDQDNRSKISRTLIKDQANAVESKDSQLNGMEAGIDTISNPLGVNITTVAVA 510
Query: 311 PPPPVHTSTLSSGSVSRGFS 330
P TS ++S + ++ S
Sbjct: 511 -PHETETSVVTSDAKNQDAS 529
>At4g14910 imidazoleglycerol-phosphate dehydratase
Length = 272
Score = 31.2 bits (69), Expect = 1.1
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 290 LSRPTVISSPLGPNLTSSANAPPPPVHTSTLSSGSVSR-------------GFSCSLTLT 336
L RP + S L P TS A++ PPP ++S S R GF T +
Sbjct: 11 LLRPNLSSRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTAS 70
Query: 337 SAQMARMDEVVKQRGLDNIS 356
+ AR+ EV ++ N+S
Sbjct: 71 PIESARIGEVKRETKETNVS 90
>At4g32551 Leunig protein
Length = 931
Score = 30.4 bits (67), Expect = 1.9
Identities = 33/120 (27%), Positives = 52/120 (42%), Gaps = 20/120 (16%)
Query: 247 LLRIQAGRKR--PLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLGPNL 304
+L+ Q+GRKR P+ P S N+ PS + S P+ S+ ++
Sbjct: 517 VLKNQSGRKRKQPVSSSGPANSSGTANTAGPSPS------------SAPSTPSTHTPGDV 564
Query: 305 TSSANAPPPPVHTSTLSSGSVSRGFSCSLTLTSA--QMARMDEVVKQRGLDNISEGAVAR 362
S N P H+ S + G + TLTS Q+A MD V+ LD+ E +++
Sbjct: 565 ISMPNLP----HSGGSSKSMMMFGTEGTGTLTSPSNQLADMDRFVEDGSLDDNVESFLSQ 620
>At3g58620 putative protein
Length = 677
Score = 30.4 bits (67), Expect = 1.9
Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 18/117 (15%)
Query: 269 RLNSGEPSGTIPAQHGLV----DGSLSRPTV----ISSPLGPNLTSSANAPPPPVHTSTL 320
R +S EPS T + L D +++P SPL P +SSA A P +S+
Sbjct: 5 RRHSLEPSITSKFRDSLSFQRDDDVINKPDFRELDFGSPLRPRGSSSAAATPAASGSSSS 64
Query: 321 SSGSVSRGFSCSLTLTSAQMARMDEVVKQRGLDN---ISEGAVARVLHAFHCYRRSA 374
SSGS S ++Q AR + GL + G+V R L H RRSA
Sbjct: 65 SSGSAS-----GKPAVTSQFARRSHSGELSGLSQTSPVKPGSVNRNLKPGH--RRSA 114
>At3g50580 proline-rich protein
Length = 265
Score = 30.4 bits (67), Expect = 1.9
Identities = 20/63 (31%), Positives = 28/63 (43%), Gaps = 14/63 (22%)
Query: 263 PRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLGPNL---TSSANAPPPPVHTST 319
P P+PK+ S P+ ++P P SP P+L T + PPPP H S+
Sbjct: 118 PHPTPKKSPSPPPTPSLPP-----------PAPKKSPSTPSLPPPTPKKSPPPPPSHHSS 166
Query: 320 LSS 322
S
Sbjct: 167 SPS 169
>At4g32640 putative protein
Length = 1069
Score = 30.0 bits (66), Expect = 2.5
Identities = 16/46 (34%), Positives = 20/46 (42%)
Query: 273 GEPSGTIPAQHGLVDGSLSRPTVISSPLGPNLTSSANAPPPPVHTS 318
G+P T+P + + RP SSP S A PPP TS
Sbjct: 319 GQPGATVPGPSRIDPNQIPRPGSSSSPTVFETRQSNQANPPPPATS 364
>At1g70460 putative protein kinase
Length = 710
Score = 30.0 bits (66), Expect = 2.5
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 257 PLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLGPNLTSSANAPPPPVH 316
P + P PSP +S P PA L S P +SSP P L SS PPPP
Sbjct: 31 PPTDSAPPPSPPA-DSSPP----PALPSLPPAVFSPPPTVSSPPPPPLDSS--PPPPPDL 83
Query: 317 TSTLSS 322
T SS
Sbjct: 84 TPPPSS 89
Score = 29.3 bits (64), Expect = 4.2
Identities = 31/117 (26%), Positives = 47/117 (39%), Gaps = 11/117 (9%)
Query: 251 QAGRKRPL------GEEDPRPSPKRLNSGEPSGTIP--AQHGLVDGSLSRPTVISSPLGP 302
Q G K+P P PS + P P + H L S + ++SP
Sbjct: 154 QGGPKKPKKHHPGPATSPPAPSAPATSPPAPPNAPPRNSSHALPPKSTAAGGPLTSP-SR 212
Query: 303 NLTSSANAPPPPVHTSTLSSGSVSRGFSCSLTLTSAQMARMDEV--VKQRGLDNISE 357
+ SS N+ PPP ++ G GF+ + A MA + V K+R +D S+
Sbjct: 213 GVPSSGNSVPPPANSGGGYQGKTMAGFAIAGFAVIALMAVVFLVRRKKKRNIDAYSD 269
>At5g66850 MAP protein kinase like protein
Length = 533
Score = 29.6 bits (65), Expect = 3.2
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 12/95 (12%)
Query: 257 PLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLGPNLTSSAN------- 309
P+ PR K++ S +PS H VD S +SSPL P L++
Sbjct: 66 PIHSPQPRSPRKQIRSPQPSRPSSPLHS-VDSSAPPRDSVSSPLHPRLSTDVTNGRRDCC 124
Query: 310 ----APPPPVHTSTLSSGSVSRGFSCSLTLTSAQM 340
P PP T + SS + L L S M
Sbjct: 125 NVHPLPLPPGATCSSSSAASVPSPQAPLKLDSFPM 159
>At1g26150 Pto kinase interactor, putative
Length = 760
Score = 29.6 bits (65), Expect = 3.2
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 255 KRPLGEEDPRPSPKRLNSGEPS-GTIPAQHGLVDGSLSRPTVISSPLGPNLTSSANAPPP 313
KRP+ P P + L +PS +P+ L +V+S P P + S P
Sbjct: 250 KRPVHPSPPSPPEETLPPPKPSPDPLPSNSSSPPTLLPPSSVVSPPSPPRKSVSGPDNPS 309
Query: 314 PVHTSTLSSGSVSRGFS 330
P + + ++ S S G S
Sbjct: 310 PNNPTPVTDNSSSSGIS 326
>At5g65620 oligopeptidase A
Length = 791
Score = 29.3 bits (64), Expect = 4.2
Identities = 17/44 (38%), Positives = 23/44 (51%)
Query: 311 PPPPVHTSTLSSGSVSRGFSCSLTLTSAQMARMDEVVKQRGLDN 354
PPP TST S S R FS +++SA A ++ VV L +
Sbjct: 54 PPPRSTTSTSLSSSSFRPFSSPPSMSSAAAAAVESVVSDETLSS 97
>At5g33310 putative protein
Length = 1137
Score = 29.3 bits (64), Expect = 4.2
Identities = 19/65 (29%), Positives = 26/65 (39%), Gaps = 3/65 (4%)
Query: 24 SPLERPWLRPKDDFVGAPHFFYVYGYMFPNLKIKFPFSPFICSVLHNINVAPSQLHPNSW 83
S + P P+D P FF VY F + FP + L + +A QL PN
Sbjct: 86 SQMSEPTESPEDH---RPGFFCVYEIYFKGCGLTFPLPEALVRYLAALEIALPQLTPNLL 142
Query: 84 AFLRC 88
+ C
Sbjct: 143 RTILC 147
>At5g32590 putative protein
Length = 871
Score = 29.3 bits (64), Expect = 4.2
Identities = 18/56 (32%), Positives = 23/56 (40%), Gaps = 1/56 (1%)
Query: 41 PHFFYVYGYMFPNLKIKFPFSPFICSVLHNINVAPSQLHPN-SWAFLRCFEILCDA 95
P FF VY F + FP + L + +A QL PN W L I +A
Sbjct: 183 PGFFCVYEIYFKGCGLTFPLPEALVRYLAALEIALPQLTPNLLWTILGIITIAAEA 238
>At4g32710 putative protein kinase
Length = 731
Score = 29.3 bits (64), Expect = 4.2
Identities = 21/62 (33%), Positives = 29/62 (45%), Gaps = 8/62 (12%)
Query: 263 PRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLGPNLTSSANAPPPPVHTSTLSS 322
P PSP R SG P + P ++ S P SP P+L ++ P PP+ T+ S
Sbjct: 157 PPPSPPRRRSG-PKPSFPPP---INSSPPNP----SPNTPSLPETSPPPKPPLSTTPFPS 208
Query: 323 GS 324
S
Sbjct: 209 SS 210
>At1g20110 unknown protein
Length = 601
Score = 28.9 bits (63), Expect = 5.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 280 PAQHGLVDGSLSRPTVISSPLGPNLTSSANAPPPP--VHTSTLSS 322
P+ S P+ ++ L PN S+ N PPPP +H LSS
Sbjct: 83 PSAPSFTSPSQPPPSPPATSLNPNSYSTFNQPPPPPTIHPQPLSS 127
>At4g13340 extensin-like protein
Length = 760
Score = 28.5 bits (62), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 293 PTVISSPLGPNLTSSANAPPPPVHTST 319
P SSP P + S+ PPPPVH S+
Sbjct: 645 PVYYSSPPPPPVYYSSPPPPPPVHYSS 671
>At1g62760 hypothetical protein
Length = 312
Score = 28.5 bits (62), Expect = 7.2
Identities = 42/142 (29%), Positives = 59/142 (40%), Gaps = 20/142 (14%)
Query: 257 PLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLSRPTVISSPLGPNLTSSANAPPPPVH 316
P P PS L+S PS + S + P+ +S P L+ S ++PPPP
Sbjct: 65 PSSPPPPPPSSSPLSSLSPS--LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPP 122
Query: 317 TST-LSSGSVSRGFSCSLTLTSAQMARMDEVVKQRGLDNISEGAVARVLHAFHCYRRSAQ 375
+S+ LSS S S S S T ++ Q LD I L+ CY +
Sbjct: 123 SSSPLSSLSPS---SSSSTYSN-----------QTNLDYIKTSCNI-TLYKTICYNSLSP 167
Query: 376 DADKLRSEVVRLR--ALNSQLA 395
A +RS +L ALN L+
Sbjct: 168 YASTIRSNPQKLAVIALNLTLS 189
>At5g38640 Unknown protein (At5g38640; MBB18.19)
Length = 642
Score = 28.1 bits (61), Expect = 9.4
Identities = 23/97 (23%), Positives = 45/97 (45%), Gaps = 10/97 (10%)
Query: 232 VSFPPRINLKGDKASLLRIQAGRKRPLGEEDPRPSPKRLNSGEPSGTIPAQHGLVDGSLS 291
V+ PP ++ +KAS + +Q+ +K+PL E+ + + + + + A+ DG
Sbjct: 155 VTMPPGLS---EKASGMEVQSDQKKPLKEKTTKAERRAIQEAQRAAKAAAK---ADGGKV 208
Query: 292 RPTVISSPLGPNLTSSANAPPPPVHTSTLSSGSVSRG 328
P +S ++S A P TS + +V+ G
Sbjct: 209 APVSSASV----ASTSVKAAKPAKATSQKNDVAVATG 241
>At2g04038 bZip transcription factor AtbZip48
Length = 166
Score = 28.1 bits (61), Expect = 9.4
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 295 VISSPLGPNLTSSAN-APPPPVHTSTLSSGSVSRGFSCSLTLTSAQ-----MARMDEVVK 348
VI+ P P TSS N ++ + SS S S+ S TS + + +DE +
Sbjct: 19 VINMPSSP--TSSLNYLNDLIINNNNYSSSSNSQDLMISNNSTSDEDHHQSIMVLDERKQ 76
Query: 349 QRGLDNISEGAVARVLHAFHCYRRSAQDADKLRSEVVRLRALNSQLAE--DREVLAAQLI 406
+R L N +R+ R + D+L S+V+RLR N+ L + +R +
Sbjct: 77 RRMLSNRESARRSRM--------RKQRHLDELWSQVIRLRNENNCLIDKLNRVSETQNCV 128
Query: 407 AKDNSFSKELA 417
K+NS KE A
Sbjct: 129 LKENSKLKEEA 139
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,926,973
Number of Sequences: 26719
Number of extensions: 463603
Number of successful extensions: 1616
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1586
Number of HSP's gapped (non-prelim): 42
length of query: 418
length of database: 11,318,596
effective HSP length: 102
effective length of query: 316
effective length of database: 8,593,258
effective search space: 2715469528
effective search space used: 2715469528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0103.10