BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0100a.11
         (245 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g22570 unknown protein                                             324  3e-89
At3g60000 putative protein                                             30  1.5
At1g08590 putative receptor kinase, CLV1                               28  4.5
At1g62110 hypothetical protein                                         28  5.8
At3g45010 carboxypeptidase precursor-like protein                      27  7.6
At5g16280 putative protein                                             27  10.0
At4g31580 splicing factor 9G8-like SR protein / SRZ-22                 27  10.0
At4g11840 putative phospholipase D-gamma                               27  10.0
At4g11830 phospholipase D-gamma-2                                      27  10.0

>At2g22570 unknown protein
          Length = 244

 Score =  324 bits (830), Expect = 3e-89
 Identities = 145/236 (61%), Positives = 194/236 (81%), Gaps = 1/236 (0%)

Query: 5   IIELLKNEIPL-EQECVVLAEDTVNGLVLVDIINGFCTVGAGNLAPRESNRQISEMINES 63
           I + LK +IP+ E+E ++L  D+  GLV+VD++NGFCT+G+GN+AP + N QIS+M+ ES
Sbjct: 7   IFDQLKKQIPVDEEEPLILNRDSSVGLVIVDVVNGFCTIGSGNMAPTKHNEQISKMVEES 66

Query: 64  ARLARLFCEKNLPVMAFLDSHHPNKPEDPYPPHCIAGTDESNLVPALRWLENETNVTLRR 123
           A+LAR FC++  PV+AF+DSHHP+ PE PYPPHCI GT+ES LVPAL+WLE+E   TLRR
Sbjct: 67  AKLAREFCDRKWPVLAFIDSHHPDIPERPYPPHCIIGTEESELVPALKWLESEDCATLRR 126

Query: 124 KECFDGYIGSAEEDGSNVFVDWVKKNKIRTLLVVGICTDICVLDFVCSTMSAKNRGFLKP 183
           K+C +G++GS E DGSNVFVDWVK+ +I+ ++VVGICTDICV DFV + +SA+N G L P
Sbjct: 127 KDCINGFVGSMESDGSNVFVDWVKEKQIKVIVVVGICTDICVFDFVATALSARNHGVLSP 186

Query: 184 LENVVVYSHGCATFDVPLEVARNTKGALAHPQEFLHHMGLYMAKERGAKIANEVLF 239
           +E+VVVYS GCATFD+PL VA++ KGA AHPQE +HH+GLYMAK RGA++ +++ F
Sbjct: 187 VEDVVVYSRGCATFDLPLHVAKDIKGAQAHPQELMHHVGLYMAKGRGAQVVSKISF 242


>At3g60000 putative protein
          Length = 451

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 20/70 (28%), Positives = 36/70 (50%), Gaps = 5/70 (7%)

Query: 2   VSQIIELLKN---EIPLEQECVVLAEDTVNGLVLVDIINGFCTVGAGNLAPRESNRQISE 58
           VSQ I+   N    +PL+ + +V ++   +GLV    I    T   GN  P+   +++  
Sbjct: 342 VSQTIQAFSNASLRLPLDGDIMVDSKQLGDGLVAASKIVDGITQNVGNYMPKA--KEMES 399

Query: 59  MINESARLAR 68
           +++E  R+AR
Sbjct: 400 LLSELTRVAR 409


>At1g08590 putative receptor kinase, CLV1
          Length = 1029

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 81  LDSHHPNKPEDP---YPPHCIAGTDESNLVPALRWLENETNVTLRRKECFDGYIGSA--E 135
           ++ HH  + E+       + + G    N+V  L ++ NE  V +  +   +G +G+A   
Sbjct: 756 IEDHHQEEDEEDDILREVNLLGGLRHRNIVKILGYVHNEREVMMVYEYMPNGNLGTALHS 815

Query: 136 EDGSNVFVDWVKKNKIRTLLVVGI 159
           +D   +  DW+ +  +   +V G+
Sbjct: 816 KDEKFLLRDWLSRYNVAVGVVQGL 839


>At1g62110 hypothetical protein
          Length = 595

 Score = 27.7 bits (60), Expect = 5.8
 Identities = 15/40 (37%), Positives = 24/40 (59%), Gaps = 1/40 (2%)

Query: 52  SNRQISEMINESARLARLFCEKNLPV-MAFLDSHHPNKPE 90
           +N QIS +I +  RL  +  EK+L + + FL+S   + PE
Sbjct: 97  TNSQISSIITDYPRLLLIDAEKSLDIKLQFLESRGASSPE 136


>At3g45010 carboxypeptidase precursor-like protein
          Length = 510

 Score = 27.3 bits (59), Expect = 7.6
 Identities = 12/28 (42%), Positives = 14/28 (49%)

Query: 197 FDVPLEVARNTKGALAHPQEFLHHMGLY 224
           FD+P  V R   G     Q+F HH G Y
Sbjct: 79  FDLPAAVDRRGSGGSPSVQDFGHHAGYY 106


>At5g16280 putative protein
          Length = 1265

 Score = 26.9 bits (58), Expect = 10.0
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 26/159 (16%)

Query: 19  CVVLAEDTV--NGLVLVDIINGFCTVGAGNLAPRESNRQI-------------SEMINES 63
           C  L EDT   NGL  V+ +  FC     ++  R S+ Q+             S++   +
Sbjct: 25  CTPLVEDTFLRNGLSFVETLKPFCNFSNIDVPVRTSSDQLYRLKKFTLRLFYASDIKQPN 84

Query: 64  ARLARLFCEKNLPVMAFLDSHHPNKPEDPYPPHCIAGTDESNLVPA-LRWLENETNVTL- 121
             +A+   E+ +      +    +   DP     I    ES + P+  R+   E   TL 
Sbjct: 85  VEVAKQRLERVITQAG--EKDFQDLKSDPPQITDILSNPESEIAPSWFRYYNKELIRTLS 142

Query: 122 -RRKECFDG------YIGSAEEDGSNVFVDWVKKNKIRT 153
               E FD        + S +E+    FVD    N++ T
Sbjct: 143 FSDHEAFDHPVACLLVVSSKDEEPIKKFVDLFNSNRLPT 181


>At4g31580 splicing factor 9G8-like SR protein / SRZ-22
          Length = 200

 Score = 26.9 bits (58), Expect = 10.0
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 42 VGAGNLAPRESNRQISEMINESARLARLFCEKNLPVMAFLDSHHPNKPED 91
          V  GNL PR + R++ +       +  ++  +  P  AFLD   P    D
Sbjct: 4  VYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARD 53


>At4g11840 putative phospholipase D-gamma
          Length = 866

 Score = 26.9 bits (58), Expect = 10.0
 Identities = 13/44 (29%), Positives = 20/44 (44%)

Query: 169 VCSTMSAKNRGFLKPLENVVVYSHGCATFDVPLEVARNTKGALA 212
           +C     K   F+K  E   +Y+H   T  V  E A+N +  +A
Sbjct: 352 LCPRYGGKGHSFIKKSEVETIYTHHQKTMIVDAEAAQNRRKIVA 395


>At4g11830 phospholipase D-gamma-2
          Length = 824

 Score = 26.9 bits (58), Expect = 10.0
 Identities = 13/44 (29%), Positives = 20/44 (44%)

Query: 169 VCSTMSAKNRGFLKPLENVVVYSHGCATFDVPLEVARNTKGALA 212
           +C     K   F+K  E   +Y+H   T  V  E A+N +  +A
Sbjct: 311 LCPRYGGKGHSFIKKSEVETIYTHHQKTMIVDAEAAQNRRKIVA 354


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.138    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,644,953
Number of Sequences: 26719
Number of extensions: 237902
Number of successful extensions: 541
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 536
Number of HSP's gapped (non-prelim): 9
length of query: 245
length of database: 11,318,596
effective HSP length: 97
effective length of query: 148
effective length of database: 8,726,853
effective search space: 1291574244
effective search space used: 1291574244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)