BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0098b.1
         (696 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g04940 SET-domain protein-like                                     615  e-176
At1g73100 putative protein                                            613  e-176
At1g17770 putative protein                                            416  e-116
At2g35160 similar to mammalian MHC III region protein G9a             372  e-103
At2g22740 similar to mammalian MHC III region protein G9a             357  1e-98
At4g13460 putative protein                                            351  7e-97
At2g33290 similar to mammalian MHC III region protein G9a             329  4e-90
At2g24740 pseudogene                                                  329  4e-90
At5g13960 unknown protein (At5g13960)                                 308  7e-84
At2g05900 hypothetical protein                                        171  1e-42
At5g47150 putative protein                                            148  9e-36
At5g47160 putative protein                                            135  1e-31
At3g04380 Su(VAR)3-9-related protein 4                                125  8e-29
At2g23750 putative SET-domain transcriptional regulator               125  8e-29
At5g43990 SET domain protein SUVR2                                    107  2e-23
At3g03750 unknown protein                                              98  2e-20
At4g30860 unknown protein                                              91  2e-18
At1g76710 ASH1-like protein 1 (ASHH1)                                  88  1e-17
At1g77300 hypothetical protein                                         85  1e-16
At2g44150 unknown protein                                              81  2e-15

>At5g04940 SET-domain protein-like
          Length = 670

 Score =  615 bits (1587), Expect = e-176
 Identities = 325/696 (46%), Positives = 434/696 (61%), Gaps = 53/696 (7%)

Query: 17  DKSRVLNVKPLRTLVPVFPSPSNPSSSATPQGGAPFVCVSPSGPFPSGVAPFYPFFVSPE 76
           DK+RVL++KPLRTL PVFPS +            PFVC  P GPFP G + FYPF  S  
Sbjct: 10  DKTRVLDIKPLRTLRPVFPSGNQ---------APPFVCAPPFGPFPPGFSSFYPFSSSQA 60

Query: 77  SQRLSEQNAQTPTAQRAAPISAAVPINSFRTPTGATNGDVGSSRRKSRGQLPEDDNFVDL 136
           +Q   + N      Q   P +   P+   + P  A+   + +  R  R          D+
Sbjct: 61  NQHTPDLNQAQYPPQHQQPQNPP-PVYQQQPPQHASEPSLVTPLRSFRSP--------DV 111

Query: 137 SEVDGEGGTGDGKRRKPQKRIREKRCSSDVDPDAVANEILKTINPGVFEILNQPDGSRDA 196
           S  + E      KRR P+KR              ++         G+  + ++ +G+R+ 
Sbjct: 112 SNGNAELEGSTVKRRIPKKR-------------PISRPENMNFESGI-NVADRENGNREL 157

Query: 197 VAYTLMIYEVMRRKLGQIDEKAKGSHSGAKRPDLKAGTLMNTKGIRANSRKRIGVVPGVE 256
           V   LM ++ +RR+  Q+++  +      KRPDLK+G+    +G+R N++KR G+VPGVE
Sbjct: 158 VLSVLMRFDALRRRFAQLEDAKEAVSGIIKRPDLKSGSTCMGRGVRTNTKKRPGIVPGVE 217

Query: 257 VGDIFFFRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIY 316
           +GD+FFFRFE+CLVGLH+PSMAGIDYL  K   EEEP+A SIVSSG Y+++  + DVLIY
Sbjct: 218 IGDVFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSGYYDNDEGNPDVLIY 277

Query: 317 SGQGGTS-REKGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKI 375
           +GQGG + ++K +SDQKLERGNLALE+SL R + VRVIRG+++ +H   K+Y+YDGLY+I
Sbjct: 278 TGQGGNADKDKQSSDQKLERGNLALEKSLRRDSAVRVIRGLKEASH-NAKIYIYDGLYEI 336

Query: 376 QNSWVEKAKSGFNVFKYKLVRLPGQPQAYMIWKSILQWTDKSASRVGVILPDLTSGAEKL 435
           + SWVEK KSG N FKYKLVR PGQP A+  W +I +W     SR G+ILPD+TSG E +
Sbjct: 337 KESWVEKGKSGHNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLILPDMTSGVESI 396

Query: 436 PVCLVNDVDNEKGPAYFTYSPTLKNLNRLAPVESSEGCTCNGGCQPGSHKCGCTQKNGGY 495
           PV LVN+VD + GPAYFTYS T+K       ++ S GC C   C+PG+  C C +KNGG 
Sbjct: 397 PVSLVNEVDTDNGPAYFTYSTTVKYSESFKLMQPSFGCDCANLCKPGNLDCHCIRKNGGD 456

Query: 496 LPYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPI 555
            PY+  G+L   K ++YEC PSC C  +C+N+V+Q G+K+RLEVF+T  +GWGLRSWD I
Sbjct: 457 FPYTGNGILVSRKPMIYECSPSCPC-STCKNKVTQMGVKVRLEVFKTANRGWGLRSWDAI 515

Query: 556 RAGTFICEYAGEVIDNARVEELSGENEDDYIFDSTRIYQQL-----------EVFSSDVE 604
           RAG+FIC Y GE  D ++V++      DDY FD+T +Y              +      E
Sbjct: 516 RAGSFICIYVGEAKDKSKVQQTMA--NDDYTFDTTNVYNPFKWNYEPGLADEDACEEMSE 573

Query: 605 APKIPSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMME 664
             +IP PL I+A+N GNVARFMNHSC+PNV W+PV  EN ++  +HVAF+AI HIPPM E
Sbjct: 574 ESEIPLPLIISAKNVGNVARFMNHSCSPNVFWQPVSYENNSQLFVHVAFFAISHIPPMTE 633

Query: 665 LTYDYGIVLPLKVGQ-----KKKKCLCGSVKCRGYF 695
           LTYDYG+  P           K+KC CGS  CRG F
Sbjct: 634 LTYDYGVSRPSGTQNGNPLYGKRKCFCGSAYCRGSF 669


>At1g73100 putative protein
          Length = 669

 Score =  613 bits (1582), Expect = e-176
 Identities = 337/709 (47%), Positives = 437/709 (61%), Gaps = 65/709 (9%)

Query: 6   GQDPAPAAGSFDKSRVLNVKPLRTLVPVFPSPSNPSSSATPQGGAPFVCVSPSGPFPSGV 65
           G +  P    +DKS VL++KPLR+L PVFP+ +          G PFV   P GP  S  
Sbjct: 6   GFNTVPNPNHYDKSIVLDIKPLRSLKPVFPNGNQ---------GPPFVGCPPFGPSSSEY 56

Query: 66  APFYPFFVSPESQRLSEQNAQTPTAQRAAPISAAVP-INSFRTPTGATNGDVGSSRRKSR 124
           + F+PF     +    + N    T     PI + VP + S+RTPT  TNG   SS  K  
Sbjct: 57  SSFFPFGAQQPTHDTPDLNQTQNT-----PIPSFVPPLRSYRTPT-KTNGPSSSSGTKR- 109

Query: 125 GQLPEDDNFVDLSEVDGEGGTGDGKRRKPQKRIREKRCSSDVDPDA-VANEILKTINPGV 183
                              G G  K     K+  +K  +++ + D  V  +     + G+
Sbjct: 110 -------------------GVGRPKGTTSVKKKEKKTVANEPNLDVQVVKKFSSDFDSGI 150

Query: 184 FEILNQPDGSRDAVAYTLMIYEVMRRKLGQIDEKAKGSHSGAKRPDLKAGTLMNTKGIRA 243
                + DG+   V+  LM ++ +RR+L Q+ E  K + S A      AGTLM+  G+R 
Sbjct: 151 -SAAEREDGNAYLVSSVLMRFDAVRRRLSQV-EFTKSATSKA------AGTLMSN-GVRT 201

Query: 244 NSRKRIGVVPGVEVGDIFFFRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGG 303
           N +KR+G VPG+EVGDIFF R E+CLVGLH  +MAGIDY+ +K   +EE LA SIVSSG 
Sbjct: 202 NMKKRVGTVPGIEVGDIFFSRIEMCLVGLHMQTMAGIDYIISKAGSDEESLATSIVSSGR 261

Query: 304 YEDNVEDGDVLIYSGQGGTS-REKGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHP 362
           YE   +D + LIYSGQGG + + + ASDQKLERGNLALE SL +GN VRV+RG  D A  
Sbjct: 262 YEGEAQDPESLIYSGQGGNADKNRQASDQKLERGNLALENSLRKGNGVRVVRGEEDAASK 321

Query: 363 TGKVYVYDGLYKIQNSWVEKAKSGFNVFKYKLVRLPGQPQAYMIWKSILQWTDKSASRVG 422
           TGK+Y+YDGLY I  SWVEK KSG N FKYKLVR PGQP A+  WKS+ +W +   +R G
Sbjct: 322 TGKIYIYDGLYSISESWVEKGKSGCNTFKYKLVRQPGQPPAFGFWKSVQKWKEGLTTRPG 381

Query: 423 VILPDLTSGAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLNRLAPVESSEGCTCNGGCQPG 482
           +ILPDLTSGAE  PV LVNDVD +KGPAYFTY+ +LK        +   GC+C+G C PG
Sbjct: 382 LILPDLTSGAESKPVSLVNDVDEDKGPAYFTYTSSLKYSETFKLTQPVIGCSCSGSCSPG 441

Query: 483 SHKCGCTQKNGGYLPYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRT 542
           +H C C +KN G LPY    +L   + V+YECGP+C C  SC+NRV Q GLK RLEVF+T
Sbjct: 442 NHNCSCIRKNDGDLPYLNGVILVSRRPVIYECGPTCPCHASCKNRVIQTGLKSRLEVFKT 501

Query: 543 KGKGWGLRSWDPIRAGTFICEYAGEVIDNARVEELSGENEDDYIFDSTRIYQQL------ 596
           + +GWGLRSWD +RAG+FICEYAGEV DN  +     + ED Y+FD++R++         
Sbjct: 502 RNRGWGLRSWDSLRAGSFICEYAGEVKDNGNLR--GNQEEDAYVFDTSRVFNSFKWNYEP 559

Query: 597 EVFSSD--VEAPK---IPSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHV 651
           E+   D   E P+   +PSPL I+A+  GNVARFMNHSC+PNV W+PV+RE   E+ +H+
Sbjct: 560 ELVDEDPSTEVPEEFNLPSPLLISAKKFGNVARFMNHSCSPNVFWQPVIREGNGESVIHI 619

Query: 652 AFYAIRHIPPMMELTYDYGIVLPLKVGQK-----KKKCLCGSVKCRGYF 695
           AF+A+RHIPPM ELTYDYGI    +   +     ++ CLCGS +CRG F
Sbjct: 620 AFFAMRHIPPMAELTYDYGISPTSEARDESLLHGQRTCLCGSEQCRGSF 668


>At1g17770 putative protein
          Length = 693

 Score =  416 bits (1069), Expect = e-116
 Identities = 264/699 (37%), Positives = 367/699 (51%), Gaps = 75/699 (10%)

Query: 35  PSPSNPSSSATPQGGAPFVCVSPSGPFPSGVAPFY-----PFFVSPESQRLSEQNAQTPT 89
           P+  +P  +  P   +P + V P          +Y     P    P  +  S+    T  
Sbjct: 31  PTMVSPVLTNMPSATSPLLMVPPLRTIWPSNKEWYDGDAGPSSTGPIKREASDNTNDTAH 90

Query: 90  AQRAAPISAAVPINSFRTPTGATNGDVGSSRRKSRGQLPEDDNFVDLSEVDGEGGTGDGK 149
              A P    +P+ + R    ++N    +    S G +             G G     K
Sbjct: 91  NTFAPPPEMVIPLITIRPSDDSSNYSCDAGAGPSTGPVKR-----------GRGRPKGSK 139

Query: 150 RRKPQKRIREKRCSSDVDPDAVANEILKTINPGVFEI----LNQPDGSRDAVAYTLMIYE 205
              P +  + K      DP++     LK  + G F+          G+++ V   +M ++
Sbjct: 140 NSTPTEPKKPKV----YDPNS-----LKVTSRGNFDSEITEAETETGNQEIVDSVMMRFD 190

Query: 206 VMRRKLGQID--EKAKGSHSGAKRPDLKAGTLMNTKGIRANSRKRIGVVPGVEVGDIFFF 263
            +RR+L QI+  E    + SG               G++ N+R+RIG VPG+ VGDIF++
Sbjct: 191 AVRRRLCQINHPEDILTTASGN----------CTKMGVKTNTRRRIGAVPGIHVGDIFYY 240

Query: 264 RFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGTS 323
             E+CLVGLH  +  GID+     S  E   A+ +V++G Y+   E  D LIYSGQGGT 
Sbjct: 241 WGEMCLVGLHKSNYGGIDFFTAAESAVEGHAAMCVVTAGQYDGETEGLDTLIYSGQGGTD 300

Query: 324 REKGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKIQNSWVEKA 383
               A DQ+++ GNLALE S+ +GNDVRV+RG+        K+Y+YDG+Y +   W    
Sbjct: 301 VYGNARDQEMKGGNLALEASVSKGNDVRVVRGVIHPHENNQKIYIYDGMYLVSKFWTVTG 360

Query: 384 KSGFNVFKYKLVRLPGQPQAYMIWKSI--LQWTDKSASRVGVILPDLTSGAEKLPVCLVN 441
           KSGF  F++KLVR P QP AY IWK++  L+  D   SR G IL DL+ GAE L V LVN
Sbjct: 361 KSGFKEFRFKLVRKPNQPPAYAIWKTVENLRNHDLIDSRQGFILEDLSFGAELLRVPLVN 420

Query: 442 DVDNEKG--PAYFTYSPTLKNLNRLAPV----ESSEGCTCNGGCQPGSHK-CGCTQKNGG 494
           +VD +    P  F Y P+  +   +         S GC  N   QP  H+ C C Q+NG 
Sbjct: 421 EVDEDDKTIPEDFDYIPSQCHSGMMTHEFHFDRQSLGCQ-NCRHQPCMHQNCTCVQRNGD 479

Query: 495 YLPYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDP 554
            LPY    +L   K ++YECG SC CP  C  R+ Q GLKL LEVF+T+  GWGLRSWDP
Sbjct: 480 LLPYH-NNILVCRKPLIYECGGSCPCPDHCPTRLVQTGLKLHLEVFKTRNCGWGLRSWDP 538

Query: 555 IRAGTFICEYAGEVIDNARVEELSGENEDDYIFDSTRIYQQL------EVFSSD-----V 603
           IRAGTFICE+AG       VEE     +DDY+FD+++IYQ+       E+   D      
Sbjct: 539 IRAGTFICEFAGLRKTKEEVEE-----DDDYLFDTSKIYQRFRWNYEPELLLEDSWEQVS 593

Query: 604 EAPKIPSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMM 663
           E   +P+ + I+A+ +GNV RFMNHSC+PNV W+P+  EN+ +  L +  +A++HIPPM 
Sbjct: 594 EFINLPTQVLISAKEKGNVGRFMNHSCSPNVFWQPIEYENRGDVYLLIGLFAMKHIPPMT 653

Query: 664 ELTYDYGIVL-------PLKVGQKKKKCLCGSVKCRGYF 695
           ELTYDYG+          + + + KK CLCGSVKCRG F
Sbjct: 654 ELTYDYGVSCVERSEEDEVLLYKGKKTCLCGSVKCRGSF 692


>At2g35160 similar to mammalian MHC III region protein G9a
          Length = 794

 Score =  372 bits (954), Expect = e-103
 Identities = 220/564 (39%), Positives = 327/564 (57%), Gaps = 49/564 (8%)

Query: 143 GGTGDGKRRKPQKRIREKRCSSDVDPDAVANEILKTINPGVFEILNQPDGSRDAVAYTLM 202
           G  G+G  RK  +R+        +D   +A++  +  N G+    +  D +R  V  T+ 
Sbjct: 264 GDYGEGSMRKNSERVA-------LDKKRLASKF-RLSNGGLPSCSSSGDSARYKVKETMR 315

Query: 203 IYEVMRRKLGQIDEKAKGSHSGAK-RPDLKAGTLMNTKGIRANSRKRI-GVVPGVEVGDI 260
           ++    +K+ Q +E       G   +   +A  ++ +KG    S  +I G VPGVEVGD 
Sbjct: 316 LFHETCKKIMQEEEARPRKRDGGNFKVVCEASKILKSKGKNLYSGTQIIGTVPGVEVGDE 375

Query: 261 FFFRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQG 320
           F +R EL L+G+H PS +GIDY+        E +A SIVSSGGY D +++ DVLIY+GQG
Sbjct: 376 FQYRMELNLLGIHRPSQSGIDYMK---DDGGELVATSIVSSGGYNDVLDNSDVLIYTGQG 432

Query: 321 GTSREKGAS----DQKLERGNLALERSLHRGNDVRVIRGMRD---EAHPTGKVYVYDGLY 373
           G   +K  +    DQ+L  GNLAL+ S+++ N VRVIRG+++   ++    K YVYDGLY
Sbjct: 433 GNVGKKKNNEPPKDQQLVTGNLALKNSINKKNPVRVIRGIKNTTLQSSVVAKNYVYDGLY 492

Query: 374 KIQNSWVEKAKSGFNVFKYKLVRLPGQPQAYMIWKSILQWTDKSASRVGVILPDLTSGAE 433
            ++  W E    G  VFK+KL R+PGQP+  + WK + + + KS  R G+   D+T G E
Sbjct: 493 LVEEYWEETGSHGKLVFKFKLRRIPGQPE--LPWKEVAK-SKKSEFRDGLCNVDITEGKE 549

Query: 434 KLPVCLVNDVDNEKGPAYFTYSPTLKNLNRLAPVESSEGCTCNGGCQPGSHKCGCTQKNG 493
            LP+C VN++D+EK P  F Y+  +   +   P+   + C C  GC   S  C C  KNG
Sbjct: 550 TLPICAVNNLDDEKPPP-FIYTAKMIYPDWCRPIPP-KSCGCTNGCSK-SKNCACIVKNG 606

Query: 494 GYLPYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWD 553
           G +PY   G + ++K +VYECGP C CPPSC  RVSQ G+K++LE+F+T+ +GWG+RS +
Sbjct: 607 GKIPYYD-GAIVEIKPLVYECGPHCKCPPSCNMRVSQHGIKIKLEIFKTESRGWGVRSLE 665

Query: 554 PIRAGTFICEYAGEVIDNARVEELSGENEDDYIFDSTRIYQQLEVFSSDVEAPKIPSPLY 613
            I  G+FICEYAGE++++ + E L+G  +D+Y+FD         +   D        P  
Sbjct: 666 SIPIGSFICEYAGELLEDKQAESLTG--KDEYLFD---------LGDED-------DPFT 707

Query: 614 ITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMMELTYDYGI-- 671
           I A  +GN+ RF+NHSC+PN+  + V+ +++     H+ F+A+ +IPP+ EL+YDY    
Sbjct: 708 INAAQKGNIGRFINHSCSPNLYAQDVLYDHEEIRIPHIMFFALDNIPPLQELSYDYNYKI 767

Query: 672 --VLPLKVGQKKKKCLCGSVKCRG 693
             V       KKK C CGS +C G
Sbjct: 768 DQVYDSNGNIKKKFCYCGSAECSG 791


>At2g22740 similar to mammalian MHC III region protein G9a
          Length = 790

 Score =  357 bits (916), Expect = 1e-98
 Identities = 222/578 (38%), Positives = 315/578 (54%), Gaps = 48/578 (8%)

Query: 146 GDGKRRKPQKRIREKRCSSDVDPDAVANEILKTINPGVFEILNQPDGSRDAVAYTLMIYE 205
           G+G R+K  K+    R    +D    + E L+ +  G     +  D SR+ V  TL ++ 
Sbjct: 226 GEGSRKKKSKKNLYWRDRESLD----SPEQLRILGVGTSSGSSSGDSSRNKVKETLRLFH 281

Query: 206 VMRRKLGQIDEKAKGSHSGAK----RPDLKAGTLMNTKGIRANSRKRI-GVVPGVEVGDI 260
            + RK+ Q DE AK      K    R D +A T++   G   NS   I G VPGVEVGD 
Sbjct: 282 GVCRKILQEDE-AKPEDQRRKGKGLRIDFEASTILKRNGKFLNSGVHILGEVPGVEVGDE 340

Query: 261 FFFRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQG 320
           F +R EL ++G+H PS AGIDY+       +  +A SIV+SGGY+D++++ DVL Y+GQG
Sbjct: 341 FQYRMELNILGIHKPSQAGIDYM----KYGKAKVATSIVASGGYDDHLDNSDVLTYTGQG 396

Query: 321 GTSRE--------KGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKV--YVYD 370
           G   +        K   DQKL  GNLAL  S+ +   VRVIRG     H   K   YVYD
Sbjct: 397 GNVMQVKKKGEELKEPEDQKLITGNLALATSIEKQTPVRVIRGKHKSTHDKSKGGNYVYD 456

Query: 371 GLYKIQNSWVEKAKSGFNVFKYKLVRLPGQPQAYMIWKSILQWTDKSASRVGVILPDLTS 430
           GLY ++  W +    G NVFK++L R+PGQP+  + W  + +   KS  R G+   D++ 
Sbjct: 457 GLYLVEKYWQQVGSHGMNVFKFQLRRIPGQPE--LSWVEVKK--SKSKYREGLCKLDISE 512

Query: 431 GAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLNRLAPVESSEGCTCNGGCQPGSHK-CGCT 489
           G E+ P+  VN++D+EK P  FTY+  L   +   PV   + C C   C     + C C 
Sbjct: 513 GKEQSPISAVNEIDDEK-PPLFTYTVKLIYPDWCRPVPP-KSCCCTTRCTEAEARVCACV 570

Query: 490 QKNGGYLPYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGL 549
           +KNGG +PY+  G +   K  +YECGP C CP SC  RV+Q G+KL LE+F+TK +GWG+
Sbjct: 571 EKNGGEIPYNFDGAIVGAKPTIYECGPLCKCPSSCYLRVTQHGIKLPLEIFKTKSRGWGV 630

Query: 550 RSWDPIRAGTFICEYAGEVIDNARVEELSGENEDDYIFDSTRIY-----QQLEVFSSDVE 604
           R    I  G+FICEY GE+++++  E   G   D+Y+FD    Y     Q +       +
Sbjct: 631 RCLKSIPIGSFICEYVGELLEDSEAERRIG--NDEYLFDIGNRYDNSLAQGMSELMLGTQ 688

Query: 605 APKI------PSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRH 658
           A +        S   I A ++GNV RF+NHSC+PN+  + V+ ++++    HV F+A  +
Sbjct: 689 AGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFFAQDN 748

Query: 659 IPPMMELTYDYGIVL----PLKVGQKKKKCLCGSVKCR 692
           IPP+ EL YDY   L      K   K+K C CG+  CR
Sbjct: 749 IPPLQELCYDYNYALDQVRDSKGNIKQKPCFCGAAVCR 786


>At4g13460 putative protein
          Length = 650

 Score =  351 bits (901), Expect = 7e-97
 Identities = 242/666 (36%), Positives = 344/666 (51%), Gaps = 70/666 (10%)

Query: 49  GAPFVCVSPS-GPFPSGVAPFYPFFVSPESQRLSEQNAQTPTAQRAAPISAAVPINSFRT 107
           G+  + + PS  P PS +    P  V+  +Q L+    Q P     A IS+AV   +  T
Sbjct: 2   GSSHIPLDPSLNPSPSLIPKLEP--VTESTQNLA---FQLPNTNPQALISSAVSDFNEAT 56

Query: 108 PTGATNGDVGSSRRKSRGQ-LPEDDNFVDLSEVDGE--------------GGTGDG---- 148
              +    V  S R +  Q L   D+   L  + G                 T D     
Sbjct: 57  DFSSDYNTVAESARSAFAQRLQRHDDVAVLDSLTGAIVPVEENPEPEPNPYSTSDSSPSV 116

Query: 149 --KRRKPQKRIREKRCSSDVDPDAVANEILKTINPGVFEILNQPDGSRDAVAYTLMIYEV 206
             +R +PQ R  E    +DV P++                       R+ V  T MIY+ 
Sbjct: 117 ATQRPRPQPRSSELVRITDVGPESERQ-------------------FREHVRKTRMIYDS 157

Query: 207 MRRKLGQIDEKAKGSHSGAKRPDLKAG---TLMNTKGIRANSRKRI-GVVPGVEVGDIFF 262
           +R  L   + K  G      R D KAG   ++M    +  N  KRI G +PGV+VGDIFF
Sbjct: 158 LRMFLMMEEAKRNGVGGRRARADGKAGKAGSMMRDCMLWMNRDKRIVGSIPGVQVGDIFF 217

Query: 263 FRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGT 322
           FRFELC++GLH    +GID+L   +S   EP+A S++ SGGYED+ + GDV++Y+GQGG 
Sbjct: 218 FRFELCVMGLHGHPQSGIDFLTGSLSSNGEPIATSVIVSGGYEDDDDQGDVIMYTGQGGQ 277

Query: 323 SR-EKGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKIQNSWVE 381
            R  + A  Q+LE GNLA+ERS++ G +VRVIRG++ E   + +VYVYDGL++I +SW +
Sbjct: 278 DRLGRQAEHQRLEGGNLAMERSMYYGIEVRVIRGLKYENEVSSRVYVYDGLFRIVDSWFD 337

Query: 382 KAKSGFNVFKYKLVRLPGQPQ---AYMIWKSILQWTDKSASRVGVILPDLTSGAEKLPVC 438
             KSGF VFKY+L R+ GQ +   + + +   L+    S    G I  D+++G E +PV 
Sbjct: 338 VGKSGFGVFKYRLERIEGQAEMGSSVLKFARTLKTNPLSVRPRGYINFDISNGKENVPVY 397

Query: 439 LVNDVDNEKGPAYFTYSPTLKNLNRLAPVES--SEGCTCNGGCQPGSHKCGCTQKNGGYL 496
           L ND+D+++ P Y+ Y         L   +S  + GC C  GC  G   C C  KN G +
Sbjct: 398 LFNDIDSDQEPLYYEYLAQTSFPPGLFVQQSGNASGCDCVNGCGSG---CLCEAKNSGEI 454

Query: 497 PYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPIR 556
            Y   G L   K +++ECG +C CPPSCRNRV+Q GL+ RLEVFR+   GWG+RS D + 
Sbjct: 455 AYDYNGTLIRQKPLIHECGSACQCPPSCRNRVTQKGLRNRLEVFRSLETGWGVRSLDVLH 514

Query: 557 AGTFICEYAGEVIDNARVEELSGENEDDYI----FDSTR--IYQQLEVFSSDVEAPKIPS 610
           AG FICEYAG  +   +   L+  N D  +    F S R   +  L    +D E P  P 
Sbjct: 515 AGAFICEYAGVALTREQANILT-MNGDTLVYPARFSSARWEDWGDLSQVLADFERPSYPD 573

Query: 611 ----PLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMMELT 666
                  +      NVA +++HS  PNV+ + V+ ++ +     V  +A  +IPPM EL+
Sbjct: 574 IPPVDFAMDVSKMRNVACYISHSTDPNVIVQFVLHDHNSLMFPRVMLFAAENIPPMTELS 633

Query: 667 YDYGIV 672
            DYG+V
Sbjct: 634 LDYGVV 639


>At2g33290 similar to mammalian MHC III region protein G9a
          Length = 651

 Score =  329 bits (843), Expect = 4e-90
 Identities = 207/501 (41%), Positives = 281/501 (55%), Gaps = 33/501 (6%)

Query: 194 RDAVAYTLMIYEVMRRKLGQIDEKAKGSHSGA---KRPDLKAGTLMNTKGIRANSRKRI- 249
           R  +  T M YE +R  L  + E  K    G    +R D+ A  +M  +G+  N  K I 
Sbjct: 149 RQVMKRTRMTYESLRIHL--MAESMKNHVLGQGRRRRSDMAAAYIMRDRGLWLNYDKHIV 206

Query: 250 GVVPGVEVGDIFFFRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVE 309
           G V GVEVGDIFF+R ELC++GLH  + AGID L  + S   EP+A SIV SGGYED+ +
Sbjct: 207 GPVTGVEVGDIFFYRMELCVLGLHGQTQAGIDCLTAERSATGEPIATSIVVSGGYEDDED 266

Query: 310 DGDVLIYSGQGGTSRE-KGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYV 368
            GDVL+Y+G GG   + K   +Q+L  GNL +ERS+H G +VRVIRG++ E   + KVYV
Sbjct: 267 TGDVLVYTGHGGQDHQHKQCDNQRLVGGNLGMERSMHYGIEVRVIRGIKYENSISSKVYV 326

Query: 369 YDGLYKIQNSWVEKAKSGFNVFKYKLVRLPGQPQ---AYMIWKSILQWTDKSASRVGVIL 425
           YDGLYKI + W    KSGF VFK++LVR+ GQP    A M +   L+         G + 
Sbjct: 327 YDGLYKIVDWWFAVGKSGFGVFKFRLVRIEGQPMMGSAVMRFAQTLRNKPSMVRPTGYVS 386

Query: 426 PDLTSGAEKLPVCLVNDVDNEKGPAYFTY------SPTLKNLNRLAPVESSEGCTCNGGC 479
            DL++  E +PV L NDVD ++ P ++ Y       P +     +    S  GC C   C
Sbjct: 387 FDLSNKKENVPVFLYNDVDGDQEPRHYEYIAKAVFPPGIFGQGGI----SRTGCECKLSC 442

Query: 480 QPGSHKCGCTQKNGGYLPYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEV 539
              +  C C +KNGG   Y   G L   K VV+ECG  C C PSC++RV+Q GL+ RLEV
Sbjct: 443 ---TDDCLCARKNGGEFAYDDNGHLLKGKHVVFECGEFCTCGPSCKSRVTQKGLRNRLEV 499

Query: 540 FRTKGKGWGLRSWDPIRAGTFICEYAGEVIDNARVEELSGENEDDYIF-----DSTRIYQ 594
           FR+K  GWG+R+ D I AG FICEYAG V+   + E LS  N D  ++     D  R + 
Sbjct: 500 FRSKETGWGVRTLDLIEAGAFICEYAGVVVTRLQAEILS-MNGDVMVYPGRFTDQWRNWG 558

Query: 595 QLEVFSSDVEAPKIPS--PL--YITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLH 650
            L     D   P  PS  PL   +      NVA +++HS  PNV+ + V+ ++ +     
Sbjct: 559 DLSQVYPDFVRPNYPSLPPLDFSMDVSRMRNVACYISHSKEPNVMVQFVLHDHNHLMFPR 618

Query: 651 VAFYAIRHIPPMMELTYDYGI 671
           V  +A+ +I P+ EL+ DYG+
Sbjct: 619 VMLFALENISPLAELSLDYGL 639


>At2g24740 pseudogene
          Length = 429

 Score =  329 bits (843), Expect = 4e-90
 Identities = 202/454 (44%), Positives = 257/454 (56%), Gaps = 51/454 (11%)

Query: 267 LCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGTSREK 326
           +CLVGLH  +  GID L  K S  + P A S+V+SG Y++  ED + LIYSG GG     
Sbjct: 1   MCLVGLHRNTAGGIDSLLAKESGVDGPAATSVVTSGKYDNETEDLETLIYSGHGGKP--- 57

Query: 327 GASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKIQNSWVEKAKSG 386
              DQ L+RGN ALE S+ R N+VRVIRG   E +   KVY+YDGLY + + W    KSG
Sbjct: 58  --CDQVLQRGNRALEASVRRRNEVRVIRG---ELYNNEKVYIYDGLYLVSDCWQVTGKSG 112

Query: 387 FNVFKYKLVRLPGQPQAYMIWKSI--LQWTDKSASRVGVILPDLTSGAEKLPVCLVNDVD 444
           F  +++KL+R PGQP  Y IWK +  L+  +    R G IL DL+ G E L V LVN+VD
Sbjct: 113 FKEYRFKLLRKPGQPPGYAIWKLVENLRNHELIDPRQGFILGDLSFGEEGLRVPLVNEVD 172

Query: 445 NEKG--PAYFTY--SPTLKNLNRLAPVESSEGCTCNGGCQPGSHK-CGCTQKNGGYLPYS 499
            E    P  F Y  S     +     V+S          Q   H+ C C  KN G LPY 
Sbjct: 173 EEDKTIPDDFDYIRSQCYSGMTNDVNVDSQSLV------QSYIHQNCTCILKNCGQLPYH 226

Query: 500 AAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPIRAGT 559
              +L   K ++YECG SC        R+ + GLKL LEVF+T   GWGLRSWDPIRAGT
Sbjct: 227 D-NILVCRKPLIYECGGSCP------TRMVETGLKLHLEVFKTSNCGWGLRSWDPIRAGT 279

Query: 560 FICEYAGEVIDNARVEELSGENEDDYIFDSTRIYQQL------EVFSSDV-----EAPKI 608
           FICE+ G       VEE     +DDY+FD++RIY         E+   D      E   +
Sbjct: 280 FICEFTGVSKTKEEVEE-----DDDYLFDTSRIYHSFRWNYEPELLCEDACEQVSEDANL 334

Query: 609 PSPLYITARNEGNVARFMNHSCTPNVLWRPV-VRENKNEADLHVAFYAIRHIPPMMELTY 667
           P+ + I+A+ +GNV RFMNH+C PNV W+P+   +N     + +  +A++HIPPM ELTY
Sbjct: 335 PTQVLISAKEKGNVGRFMNHNCWPNVFWQPIEYDDNNGHIYVRIGLFAMKHIPPMTELTY 394

Query: 668 DYGIVLPLKVGQK------KKKCLCGSVKCRGYF 695
           DYGI    K G+       KK CLCGSVKCRG F
Sbjct: 395 DYGISCVEKTGEDEVIYKGKKICLCGSVKCRGSF 428


>At5g13960 unknown protein (At5g13960)
          Length = 624

 Score =  308 bits (789), Expect = 7e-84
 Identities = 194/503 (38%), Positives = 266/503 (52%), Gaps = 45/503 (8%)

Query: 227 RPDLKAGTLMNTKGIRANSRKRIGVVPGVEVGDIFFFRFELCLVGLHAPSMAGIDYLGTK 286
           RPDLK  T M         RK IG +PG++VG  FF R E+C VG H   + GIDY+  +
Sbjct: 126 RPDLKGVTEMIKAKAILYPRKIIGDLPGIDVGHRFFSRAEMCAVGFHNHWLNGIDYMSME 185

Query: 287 VSQEEE----PLAVSIVSSGGYEDNVEDGDVLIYSGQGG---TSREKGASDQKLERGNLA 339
             +E      PLAVSIV SG YED++++ D + Y+GQGG   T  ++   DQ LERGNLA
Sbjct: 186 YEKEYSNYKLPLAVSIVMSGQYEDDLDNADTVTYTGQGGHNLTGNKRQIKDQLLERGNLA 245

Query: 340 LERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKIQNSWVEKAKSGFNVFKYKLVRLPG 399
           L+        VRV RG   ++  T +VY YDGLYK++  W +K  SGF V+KY+L RL G
Sbjct: 246 LKHCCEYNVPVRVTRGHNCKSSYTKRVYTYDGLYKVEKFWAQKGVSGFTVYKYRLKRLEG 305

Query: 400 QPQAYMIWKSILQWT-DKSASRV-GVILPDLTSGAEKLPVCLVNDVDNE--KGPAYFTYS 455
           QP+      + +      S S + G++  D++ G E   +   N VD+      + FTY 
Sbjct: 306 QPELTTDQVNFVAGRIPTSTSEIEGLVCEDISGGLEFKGIPATNRVDDSPVSPTSGFTYI 365

Query: 456 PTLKNLNRLAPVESSEGCTCNGGCQPGSHKCGCTQKNGGYLPYSAA--GLLADLKSVVYE 513
            +L     +   +SS GC C G C   S KC C + NGG  PY     G L + + VV+E
Sbjct: 366 KSLIIEPNVIIPKSSTGCNCRGSCTD-SKKCACAKLNGGNFPYVDLNDGRLIESRDVVFE 424

Query: 514 CGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPIRAGTFICEYAGEVIDNAR 573
           CGP C C P C NR SQ  L+  LEVFR+  KGW +RSW+ I AG+ +CEY G V   A 
Sbjct: 425 CGPHCGCGPKCVNRTSQKRLRFNLEVFRSAKKGWAVRSWEYIPAGSPVCEYIGVVRRTAD 484

Query: 574 VEELSGENEDDYIFD--------------------STRIYQQLEVFSSDVEAPKIPSPLY 613
           V+ +S   +++YIF+                    +  +   +   S D  AP+      
Sbjct: 485 VDTIS---DNEYIFEIDCQQTMQGLGGRQRRLRDVAVPMNNGVSQSSEDENAPE----FC 537

Query: 614 ITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMMELTYDYGIVL 673
           I A + GN ARF+NHSC PN+  + V+  +++     V  +A  +I PM ELTYDYG  L
Sbjct: 538 IDAGSTGNFARFINHSCEPNLFVQCVLSSHQDIRLARVVLFAADNISPMQELTYDYGYAL 597

Query: 674 PLKVGQ----KKKKCLCGSVKCR 692
               G     K+  C CG++ CR
Sbjct: 598 DSVHGPDGKVKQLACYCGALNCR 620


>At2g05900 hypothetical protein
          Length = 312

 Score =  171 bits (434), Expect = 1e-42
 Identities = 92/193 (47%), Positives = 127/193 (65%), Gaps = 4/193 (2%)

Query: 269 LVGLHAPSMAGIDYLGTKVSQEEE--PLAVSIVSSGGYEDNVEDGDVLIYSGQGGTSREK 326
           LVGLH+ ++  ++++G +   +EE   +AVS++SSG   D  ED D LI++G GGT    
Sbjct: 3   LVGLHSGTI-DMEFIGVEDHGDEEGKQIAVSVISSGKNADKTEDPDSLIFTGFGGTDMYH 61

Query: 327 GAS-DQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKIQNSWVEKAKS 385
           G   +QKLER N+ LE +  + + VRV+R M+DE    G +Y+YDG Y I N W E+ ++
Sbjct: 62  GQPCNQKLERLNIPLEAAFRKKSIVRVVRCMKDEKRTNGNIYIYDGTYMITNRWEEEGQN 121

Query: 386 GFNVFKYKLVRLPGQPQAYMIWKSILQWTDKSASRVGVILPDLTSGAEKLPVCLVNDVDN 445
           GF VFK+KLVR P Q  A+ IWKSI  W +  + R G+IL DL++GAE L VCLVN+VD 
Sbjct: 122 GFIVFKFKLVREPDQKPAFGIWKSIQNWRNGLSIRPGLILEDLSNGAENLKVCLVNEVDK 181

Query: 446 EKGPAYFTYSPTL 458
           E GPA F Y  +L
Sbjct: 182 ENGPALFRYVTSL 194



 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 45/92 (48%), Positives = 58/92 (62%), Gaps = 4/92 (4%)

Query: 604 EAPKIPSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMM 663
           E   + S L I+A+  GNVARFMNHSC+PNV W+ + RE      L++ F+A++HIPP+ 
Sbjct: 224 EKLSVSSSLVISAKKSGNVARFMNHSCSPNVFWQSIAREQNGLWCLYIGFFAMKHIPPLT 283

Query: 664 ELTYDYGIVLPLKVGQKKKKCLCGSVKCRGYF 695
           EL YDYG       G  KK CLC + KC G F
Sbjct: 284 ELRYDYG----KSRGGGKKMCLCRTKKCCGSF 311


>At5g47150 putative protein
          Length = 328

 Score =  148 bits (374), Expect = 9e-36
 Identities = 83/208 (39%), Positives = 124/208 (58%), Gaps = 13/208 (6%)

Query: 201 LMIYEVMRRKLGQIDEKAKGSHSG-----AKRPDLKAGTLMNTKGIRANSRKRIGVVPGV 255
           L +  + ++   Q+D   K    G       R DLK  T++   G + N+ KRIG VPG+
Sbjct: 122 LEVLSLFKQVYNQLDRDKKARRGGDFLDATSRIDLKTLTVLEKMGKQVNTEKRIGSVPGI 181

Query: 256 EVGDIFFFRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDN-VEDGDVL 314
            +GD+F ++ EL +VGLH+  M GIDY    +   ++ +  SIV+S GY  N   +  V+
Sbjct: 182 NIGDVFQYKTELRVVGLHSKPMCGIDY----IKLGDDRITTSIVASEGYGYNDTYNSGVM 237

Query: 315 IYSGQGGT--SREKGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGL 372
           +Y+G+GG   +++K   DQKL +GNLAL  S+ + + VRVIRG  +     GK YVYDGL
Sbjct: 238 VYTGEGGNVINKQKKTEDQKLVKGNLALATSMRQKSQVRVIRG-EERLDRKGKRYVYDGL 296

Query: 373 YKIQNSWVEKAKSGFNVFKYKLVRLPGQ 400
           Y ++  WVE+   G +V+K+KL R+PGQ
Sbjct: 297 YMVEEYWVERDVRGKSVYKFKLCRIPGQ 324


>At5g47160 putative protein
          Length = 415

 Score =  135 bits (339), Expect = 1e-31
 Identities = 95/255 (37%), Positives = 130/255 (50%), Gaps = 35/255 (13%)

Query: 147 DGKRRKPQKRIREKRCSSDVDPDAVANEILKTINPGVFEILNQPDGSRDAVAYTLMIYEV 206
           D +R      I+  R S D+ P     E+L+                     +TL+  E+
Sbjct: 183 DERRSGVLSVIQRNRLSKDLTPRQKVQEVLRI--------------------FTLVFDEL 222

Query: 207 MRRKLGQIDEKAKGSHSGAKRPDLKAGTLMNTKGIRANSRKRIGVVPGVEVGDIFFFRFE 266
            R K      +  GS +   R D +  T++   G++ NS+KRIG VPG++VGD   F+  
Sbjct: 223 DRNKAA----RRGGSETAKSRIDYQTWTILREMGMQVNSQKRIGSVPGIKVGDKIQFKAA 278

Query: 267 LCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGG--YEDNVEDGDVLIYSGQGGTSR 324
           L ++GLH   M+GIDY+     +  + +A SIVSS G  Y D   + DV+IY GQGG  R
Sbjct: 279 LSVIGLHFGIMSGIDYM----YKGNKEVATSIVSSEGNDYGDRFIN-DVMIYCGQGGNMR 333

Query: 325 ---EKGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKIQNSWVE 381
               K   DQKL  GNLAL  S+     VRVIRG R      GK YVYDGLY+++  W E
Sbjct: 334 SKDHKAIKDQKLVGGNLALANSIKEKTPVRVIRGER-RLDNRGKDYVYDGLYRVEKYWEE 392

Query: 382 KAKSGFNVFKYKLVR 396
           +   G  +FK+KL R
Sbjct: 393 RGPQGNILFKFKLRR 407


>At3g04380 Su(VAR)3-9-related protein 4
          Length = 492

 Score =  125 bits (314), Expect = 8e-29
 Identities = 94/323 (29%), Positives = 142/323 (43%), Gaps = 63/323 (19%)

Query: 425 LPDLTSGAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLN--------RLAPVESSEGCT-C 475
           + D+T G+E + + LV+DV +E  P  FTY P   N+          LA +   + C  C
Sbjct: 144 IADITKGSESVKIPLVDDVGSEAVPK-FTYIP--HNIVYQSAYLHVSLARISDEDCCANC 200

Query: 476 NGGCQPGSHKCGCTQKNGGYLPYSAAGLLAD----------------------------- 506
            G C      C C ++  G   Y+  GLL +                             
Sbjct: 201 KGNCLSADFPCTCARETSGEYAYTKEGLLKEKFLDTCLKMKKEPDSFPKVYCKDCPLERD 260

Query: 507 -------------LKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTK-GKGWGLRSW 552
                        ++  + EC   C C   C NRV Q G++ +L+V+ T+ GKGWGLR+ 
Sbjct: 261 HDKGTYGKCDGHLIRKFIKECWRKCGCDMQCGNRVVQRGIRCQLQVYFTQEGKGWGLRTL 320

Query: 553 DPIRAGTFICEYAGEVIDNARVEELSGENEDD-YIFDSTRIYQQLEVFSSDVEAPKIPSP 611
             +  GTFICEY GE++ N  + + +  +  + + +  T     L+      +  K    
Sbjct: 321 QDLPKGTFICEYIGEILTNTELYDRNVRSSSERHTYPVT-----LDADWGSEKDLKDEEA 375

Query: 612 LYITARNEGNVARFMNHSC-TPNVLWRPVVRENKNEADLHVAFYAIRHIPPMMELTYDYG 670
           L + A   GNVARF+NH C   N++  P+  E  +    H+AF+ +R +  M ELT+DY 
Sbjct: 376 LCLDATICGNVARFINHRCEDANMIDIPIEIETPDRHYYHIAFFTLRDVKAMDELTWDYM 435

Query: 671 IVLPLKVGQKKK-KCLCGSVKCR 692
           I    K    K  +C CGS  CR
Sbjct: 436 IDFNDKSHPVKAFRCCCGSESCR 458


>At2g23750 putative SET-domain transcriptional regulator
          Length = 203

 Score =  125 bits (314), Expect = 8e-29
 Identities = 68/187 (36%), Positives = 97/187 (51%), Gaps = 11/187 (5%)

Query: 511 VYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPIRAGTFICEYAGEVID 570
           VYEC   C C  +C+NRV Q G++ +LEVFRT+ KGWGLR+ + I  GTF+CEY GEV+D
Sbjct: 21  VYECNKFCGCSRTCQNRVLQNGIRAKLEVFRTESKGWGLRACEHILRGTFVCEYIGEVLD 80

Query: 571 NARVEELS---GENEDDYIFD-STRIYQQLEVFSSDVEAPKIPSPLYITARNEGNVARFM 626
                +     G  +  YI D    I     +   +++         I A   GN++RF+
Sbjct: 81  QQEANKRRNQYGNGDCSYILDIDANINDIGRLMEEELD-------YAIDATTHGNISRFI 133

Query: 627 NHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMMELTYDYGIVLPLKVGQKKKKCLC 686
           NHSC+PN++   V+ E+      H+  YA   I    E+T DYG        + +  C C
Sbjct: 134 NHSCSPNLVNHQVIVESMESPLAHIGLYASMDIAAGEEITRDYGRRPVPSEQENEHPCHC 193

Query: 687 GSVKCRG 693
            +  CRG
Sbjct: 194 KATNCRG 200


>At5g43990 SET domain protein SUVR2
          Length = 717

 Score =  107 bits (267), Expect = 2e-23
 Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 62/318 (19%)

Query: 427 DLTSGAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLNR-----LAPVESSEGCT-CNGGCQ 480
           D++ G E + +  VN+V+++  P +   + +L   +      L  +   + C+ C G C 
Sbjct: 395 DISLGKETVEIPWVNEVNDKVPPVFHYIAQSLVYQDAAVKFSLGNIRDDQCCSSCCGDCL 454

Query: 481 PGSHKCGCTQKNGGYLPYSAAGLLAD---------------------------------- 506
             S  C C     G+  Y+  GLL +                                  
Sbjct: 455 APSMACRCATAFNGFA-YTVDGLLQEDFLEQCISEARDPRKQMLLYCKECPLEKAKKEVI 513

Query: 507 --------LKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRT-KGKGWGLRSWDPIRA 557
                    +  + EC   C C  +C NRV Q G+  +L+VF T  G+GWGLR+ + +  
Sbjct: 514 LEPCKGHLKRKAIKECWSKCGCMKNCGNRVVQQGIHNKLQVFFTPNGRGWGLRTLEKLPK 573

Query: 558 GTFICEYAGEVIDNARV-EELSGENEDDYIFDSTRIYQQLEVFSSDVEAPKIPSPLYITA 616
           G F+CE AGE++    + + +S       I D+   Y   E  S D +A      L +  
Sbjct: 574 GAFVCELAGEILTIPELFQRISDRPTSPVILDA---YWGSEDISGDDKA------LSLEG 624

Query: 617 RNEGNVARFMNHSC-TPNVLWRPVVRENKNEADLHVAFYAIRHIPPMMELTYDYGIVLPL 675
            + GN++RF+NH C   N++  PV  E  +    H+AF+  R I  M ELT+DYG+    
Sbjct: 625 THYGNISRFINHRCLDANLIEIPVHAETTDSHYYHLAFFTTREIDAMEELTWDYGVPFNQ 684

Query: 676 KVGQKKK-KCLCGSVKCR 692
            V       C CGS  CR
Sbjct: 685 DVFPTSPFHCQCGSDFCR 702


>At3g03750 unknown protein
          Length = 354

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 82/289 (28%), Positives = 120/289 (41%), Gaps = 31/289 (10%)

Query: 427 DLTSGAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLNRLAPVESSEGCTCN---------- 476
           D     E + +   N +D+++  AYF Y+P     +   P     G   N          
Sbjct: 68  DAARSLENISIPFHNSIDSQRY-AYFIYTPFQIPASSPPPPRQWWGAAANECGSESRPCF 126

Query: 477 ---------GGCQPGSHKCGCTQKNGGYLPYSAAGLLADLKSVVYECGPSCHCPPSCRNR 527
                    G        C C +   GY    A    A ++ +  ECG  C C   C NR
Sbjct: 127 DSVSESGRFGVSLVDESGCECERCEEGYCKCLA---FAGMEEIANECGSGCGCGSDCSNR 183

Query: 528 VSQGGLKLRLEVFRTKGKGWGLRSWDPIRAGTFICEYAGEVI--DNARVEELSGENEDDY 585
           V+Q G+ + L++ R + KGW L +   I+ G FICEYAGE++  D AR      +N  D 
Sbjct: 184 VTQKGVSVSLKIVRDEKKGWCLYADQLIKQGQFICEYAGELLTTDEAR----RRQNIYDK 239

Query: 586 IFDSTRIYQQLEVFSSDVEAPKIPSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKN 645
           +  +      L V    + + +    + I A   GNVARF+NHSC    L   V+  +  
Sbjct: 240 LRSTQSFASALLVVREHLPSGQACLRINIDATRIGNVARFINHSCDGGNL-STVLLRSSG 298

Query: 646 EADLHVAFYAIRHIPPMMELTYDYGIVLPLKVGQKKK-KCLCGSVKCRG 693
                + F+A + I    EL++ YG V      +  K  C CGS  C G
Sbjct: 299 ALLPRLCFFAAKDIIAEEELSFSYGDVSVAGENRDDKLNCSCGSSCCLG 347


>At4g30860 unknown protein
          Length = 497

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 24/181 (13%)

Query: 514 CGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPIRAGTFICEYAGEVIDNAR 573
           C   C CP SC NR  +   K++  + +T+  GWG+ + + I    FI EY GEVI +A+
Sbjct: 307 CSKGCSCPESCGNRPFRKEKKIK--IVKTEHCGWGVEAAESINKEDFIVEYIGEVISDAQ 364

Query: 574 VEELSGENEDDYIFDSTRIYQQLEVFSSDVEAPKIPSPLYITARNEGNVARFMNHSCTPN 633
            E+              R++        D    +I     I A  +GN +RF+NHSC PN
Sbjct: 365 CEQ--------------RLWDMKHKGMKDFYMCEIQKDFTIDATFKGNASRFLNHSCNPN 410

Query: 634 VLWRPVVRENKNEADLHVAFYAIRHIPPMMELTYDYGIVLPLKVGQKKKKCLCGSVKCRG 693
                V+ + + E +  V  +A R I     LTYDY  V   + G  + KC CGS  C+G
Sbjct: 411 C----VLEKWQVEGETRVGVFAARQIEAGEPLTYDYRFV---QFG-PEVKCNCGSENCQG 462

Query: 694 Y 694
           Y
Sbjct: 463 Y 463


>At1g76710 ASH1-like protein 1 (ASHH1)
          Length = 492

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 58/183 (31%), Positives = 87/183 (46%), Gaps = 22/183 (12%)

Query: 513 ECGPS-CHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPIRAGTFICEYAGEVIDN 571
           EC P  C C   C+N+  Q     + ++ + +G+GWGL + + I+AG FI EY GEVI  
Sbjct: 66  ECTPGYCPCGVYCKNQKFQKCEYAKTKLIKCEGRGWGLVALEEIKAGQFIMEYCGEVISW 125

Query: 572 ARVEELSGENEDDYIFDSTRIYQQLEVFSSDVEAPKIPSPLYITARNEGNVARFMNHSCT 631
              ++ +   E   + D+  I               + +   I A  +G++ARF+NHSC 
Sbjct: 126 KEAKKRAQTYETHGVKDAYII--------------SLNASEAIDATKKGSLARFINHSCR 171

Query: 632 PNVLWRPVVRENKNEADLHVAFYAIRHIPPMMELTYDYGIVLPLKVGQKKKKCLCGSVKC 691
           PN       R+     ++ V  +A   I P  EL YDY        G  K +CLCG+V C
Sbjct: 172 PNC----ETRKWNVLGEVRVGIFAKESISPRTELAYDYNFEW---YGGAKVRCLCGAVAC 224

Query: 692 RGY 694
            G+
Sbjct: 225 SGF 227


>At1g77300 hypothetical protein
          Length = 408

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 20/178 (11%)

Query: 517 SCHCPPSCRNRVSQGGLKLRLEVFRTKGKGWGLRSWDPIRAGTFICEYAGEVIDNARVEE 576
           +C     C N+  Q    ++ E F++  KG+GLR  + +R G F+ EY GEV+D    E 
Sbjct: 32  TCPAGDLCSNQQFQKRKYVKFERFQSGKKGYGLRLLEDVREGQFLIEYVGEVLDMQSYE- 90

Query: 577 LSGENEDDYIFDSTRIYQQLEVFSSDVEAPKIPSPLYITARNEGNVARFMNHSCTPNVLW 636
                + +Y F   + +  + +  ++V          I A  +GN+ RF+NHSC PN   
Sbjct: 91  ---TRQKEYAFKGQKHFYFMTLNGNEV----------IDAGAKGNLGRFINHSCEPNCR- 136

Query: 637 RPVVRENKNEADLHVAFYAIRHIPPMMELTYDYGIVLPLKVGQKKKKCLCGSVKCRGY 694
                +     ++ V  ++++ +    ELT+DY  V     G   KKC CGS  CRGY
Sbjct: 137 ---TEKWMVNGEICVGIFSMQDLKKGQELTFDYNYVRVF--GAAAKKCYCGSSHCRGY 189


>At2g44150 unknown protein
          Length = 363

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 23/207 (11%)

Query: 486 CGCTQKNGGYLPYSAAGLLADLKSVVYECGPSCHCPPSCRNRVSQGGLKLRLEVFRTKGK 545
           C C+  + G    +  G       +   C  SC C   C N+  Q     ++++ +T+  
Sbjct: 68  CSCSSSSPGSSS-TVCGSNCHCGMLFSSCSSSCKCGSECNNKPFQQRHVKKMKLIQTEKC 126

Query: 546 GWGLRSWDPIRAGTFICEYAGEVIDNARVEELSGENEDDYIFDSTRIYQQLEVFSSDVEA 605
           G G+ + + I AG FI EY GEVID+   EE              R+++      ++   
Sbjct: 127 GSGIVAEEEIEAGEFIIEYVGEVIDDKTCEE--------------RLWKMKHRGETNFYL 172

Query: 606 PKIPSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEADLHVAFYAIRHIPPMMEL 665
            +I   + I A ++GN +R++NHSC PN   +  +     + +  +  +A R I     L
Sbjct: 173 CEITRDMVIDATHKGNKSRYINHSCNPNTQMQKWI----IDGETRIGIFATRGIKKGEHL 228

Query: 666 TYDYGIVLPLKVGQKKKKCLCGSVKCR 692
           TYDY  V   + G   + C CG+V CR
Sbjct: 229 TYDYQFV---QFG-ADQDCHCGAVGCR 251


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.317    0.136    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,292,902
Number of Sequences: 26719
Number of extensions: 829062
Number of successful extensions: 2459
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 2250
Number of HSP's gapped (non-prelim): 113
length of query: 696
length of database: 11,318,596
effective HSP length: 106
effective length of query: 590
effective length of database: 8,486,382
effective search space: 5006965380
effective search space used: 5006965380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)