BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0095c.6
(384 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20930 unknown protein 419 e-117
At1g32580 unknown protein, like plastid protein 103 2e-22
At2g33430 plastid protein 99 3e-21
At2g35240 unknown protein 94 1e-19
At2g37510 putative RNA-binding protein 82 4e-16
At1g11430 unknown protein 77 2e-14
At3g23830 glycine-rich RNA binding protein, putative 75 5e-14
At4g13850 glycine-rich RNA-binding protein AtGRP2 - like 75 6e-14
At5g06210 unknown protein 73 2e-13
At5g47320 40S ribosomal protein S19 72 4e-13
At4g20030 putative protein 72 7e-13
At5g61030 RNA-binding protein - like 70 1e-12
At5g54580 unknown protein 70 1e-12
At3g46020 RNA binding protein -like 70 1e-12
At3g26420 RNA-binding protein, putative 69 4e-12
At2g22090 putative RNA-binding protein 68 7e-12
At3g15000 unknown protein 65 6e-11
At1g72530 DAG-like protein 65 8e-11
At1g74230 putative RNA-binding protein 64 1e-10
At4g39260 glycine-rich protein (clone AtGRP8) 63 2e-10
>At3g20930 unknown protein
Length = 374
Score = 419 bits (1078), Expect = e-117
Identities = 216/373 (57%), Positives = 276/373 (73%), Gaps = 32/373 (8%)
Query: 27 LPNKSYHSNLPSSSSSSISCNRFFT---------------------IIAAAAATTYPSFT 65
+ + S+ + +SSSS I NRFF ++ +++A + P +
Sbjct: 5 IASTSFFVPISNSSSSHIINNRFFPSFYSPNLNFGTFRKTSLSSSHLVFSSSAISAPPSS 64
Query: 66 PSTTHNRHWMVLMDKPPLGVISKSQVIDYYVKTLQTVMGSEKEAQMCLYDASWDTHFGFC 125
T N +WMVL+DKPP V SKS ++DYYV+ L V+G+EK+AQ+ +YDAS+DTHFGFC
Sbjct: 65 TVLTRNSYWMVLLDKPPHWVSSKSAMVDYYVEILAKVLGNEKDAQVSIYDASFDTHFGFC 124
Query: 126 CDIDEEISSQLASLPGVLSVRPDPDFNSLKKDYSLSSGQAGLSSGLQTRTNMLFPAGNSK 185
C IDE+ S QLASLPGV+S+RP+ D++S KK+Y + S + G+S LF G K
Sbjct: 125 CHIDEDASRQLASLPGVVSIRPEQDYSSEKKNYGIGSHK-GVS---------LFDHGTVK 174
Query: 186 HWLVRMDKPGVEVVTKAQIVDYYAQILTKVMGNEKDAQMCIYHVSWKTNFGFCCELDEDC 245
HW+VR+DKPGV +VTKAQ+VD+ Q+L+KV+ NEKDAQMC+YHVSW+++FGFCC+LDE
Sbjct: 175 HWMVRIDKPGVGIVTKAQMVDHCVQLLSKVLWNEKDAQMCLYHVSWQSDFGFCCDLDERS 234
Query: 246 AQDLAGVPGVSSVQPDDNFESENKNYE-DSLSVPNSSEASQEASLRTKKLFVTGLSFYTS 304
A +LAGVPGV +V PD++FES NK+YE DS + S+ ++TKKLF+TGLSFYTS
Sbjct: 235 AVELAGVPGVLAVVPDNSFESLNKDYEGDSTQDSRDQDDSESPPVKTKKLFITGLSFYTS 294
Query: 305 EKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGAALKEMNGKIINGWMIV 364
EKTLRAAFEGFGELV+VK+I+DKISKRSKGYAF+EYTTEEAAG ALKEMNGKIINGWMIV
Sbjct: 295 EKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIV 354
Query: 365 VDVAKTNPPRFNR 377
VDVAKT P R NR
Sbjct: 355 VDVAKTKPFRQNR 367
>At1g32580 unknown protein, like plastid protein
Length = 229
Score = 103 bits (256), Expect = 2e-22
Identities = 55/137 (40%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 158 YSLSSGQAGLSSGLQTRTNMLFPAGNSKHWLVRMDKPGVEVVTKAQIVDYYAQILTKVMG 217
YS + S T LFP + +HWL+ MDKPG E TK Q++D Y Q L K++G
Sbjct: 67 YSPLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIG 126
Query: 218 NEKDAQMCIYHVSWKTNFGFCCELDEDCAQDLAGVPGVSSVQPDDNFESENKNYEDSLSV 277
+E++A+ IY+VS + FGF CE+DE+ + L G+PGV + PD + ENK+Y L V
Sbjct: 127 SEEEAKKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKDYGAELFV 186
Query: 278 PNSSEASQEASLRTKKL 294
+ E Q R +K+
Sbjct: 187 --NGEIVQRPPERQRKI 201
Score = 88.6 bits (218), Expect = 5e-18
Identities = 41/86 (47%), Positives = 60/86 (69%)
Query: 73 HWMVLMDKPPLGVISKSQVIDYYVKTLQTVMGSEKEAQMCLYDASWDTHFGFCCDIDEEI 132
HW+++MDKP +K Q+ID YV+TL ++GSE+EA+ +Y+ S + +FGF C+IDEE
Sbjct: 95 HWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSEEEAKKKIYNVSCERYFGFGCEIDEET 154
Query: 133 SSQLASLPGVLSVRPDPDFNSLKKDY 158
S++L LPGVL + PD + KDY
Sbjct: 155 SNKLEGLPGVLFILPDSYVDQENKDY 180
>At2g33430 plastid protein
Length = 219
Score = 99.4 bits (246), Expect = 3e-21
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Query: 158 YSLSSGQAGLSSGLQTRTNMLFPAGNSKHWLVRMDKPGVEVVTKAQIVDYYAQILTKVMG 217
YS + + S T LFP + +HWL+ MDKPG E TK Q++D Y Q L KV+G
Sbjct: 58 YSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVG 117
Query: 218 NEKDAQMCIYHVSWKTNFGFCCELDEDCAQDLAGVPGVSSVQPDDNFESENKNYEDSLSV 277
+E++A+ IY+VS + GF CE+DE+ + L G+PGV V PD + ENK+Y L V
Sbjct: 118 SEEEAKKRIYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDYGAELFV 177
Query: 278 PNSSEASQEASLRTKKL 294
+ E Q + R +++
Sbjct: 178 --NGEIVQRSPERQRRV 192
Score = 87.0 bits (214), Expect = 2e-17
Identities = 58/166 (34%), Positives = 86/166 (50%), Gaps = 25/166 (15%)
Query: 15 RSQVHQLPTNITLPNKSYHSNLPSS---SSSSISCN-RFFTIIAAA--AATTYPSFTPST 68
R L +N+TL +PSS S + C+ RFF+I A + +TY +
Sbjct: 9 RHLTRALLSNVTLMAPP---RIPSSVHYGGSRLGCSTRFFSIRCGANRSGSTYSPLNSGS 65
Query: 69 THN----------------RHWMVLMDKPPLGVISKSQVIDYYVKTLQTVMGSEKEAQMC 112
+ HW+++MDKP +K Q+ID Y++TL V+GSE+EA+
Sbjct: 66 NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKR 125
Query: 113 LYDASWDTHFGFCCDIDEEISSQLASLPGVLSVRPDPDFNSLKKDY 158
+Y+ S + + GF C+IDEE S++L LPGVL V PD + KDY
Sbjct: 126 IYNVSCERYLGFGCEIDEETSTKLEGLPGVLFVLPDSYVDPENKDY 171
>At2g35240 unknown protein
Length = 232
Score = 94.0 bits (232), Expect = 1e-19
Identities = 49/120 (40%), Positives = 70/120 (57%)
Query: 158 YSLSSGQAGLSSGLQTRTNMLFPAGNSKHWLVRMDKPGVEVVTKAQIVDYYAQILTKVMG 217
YS + S T LFP + +HWL+ M+KPG E K Q++D Y Q L K++G
Sbjct: 70 YSPLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKIVG 129
Query: 218 NEKDAQMCIYHVSWKTNFGFCCELDEDCAQDLAGVPGVSSVQPDDNFESENKNYEDSLSV 277
+E++A+ IY+VS + FGF CE+DE+ + L G+PGV V PD + E K+Y L V
Sbjct: 130 SEEEARKKIYNVSCERYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDPEFKDYGAELFV 189
Score = 85.5 bits (210), Expect = 4e-17
Identities = 41/86 (47%), Positives = 59/86 (67%)
Query: 73 HWMVLMDKPPLGVISKSQVIDYYVKTLQTVMGSEKEAQMCLYDASWDTHFGFCCDIDEEI 132
HW+++M+KP K Q+ID YV+TL ++GSE+EA+ +Y+ S + +FGF C+IDEE
Sbjct: 98 HWLIVMEKPGGENAQKQQMIDCYVQTLAKIVGSEEEARKKIYNVSCERYFGFGCEIDEET 157
Query: 133 SSQLASLPGVLSVRPDPDFNSLKKDY 158
S++L LPGVL V PD + KDY
Sbjct: 158 SNKLEGLPGVLFVLPDSYVDPEFKDY 183
>At2g37510 putative RNA-binding protein
Length = 142
Score = 82.4 bits (202), Expect = 4e-16
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 287 ASLRTKKLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAA 346
++L + +LFV+GLS T+ + L+ AF FG+LV +VI D+ S RSKG+ F+ Y T E A
Sbjct: 29 STLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDA 88
Query: 347 GAALKEMNGKIINGWMIVVDVAKTNPPR 374
A EMN K ++GW+I VD A+ PR
Sbjct: 89 EKAKAEMNAKFLDGWVIFVDPARPREPR 116
>At1g11430 unknown protein
Length = 232
Score = 77.0 bits (188), Expect = 2e-14
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 66 PSTTHNRHWMVLMDKPPLGVISKSQVIDYYVKTLQTVMGSEKEAQMCLYDASWDTHFGFC 125
P +N HW+++M+ P S+ Q+ID Y+ TL TV+GS +EA+ +Y S T+ GF
Sbjct: 83 PGCDYN-HWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQ 141
Query: 126 CDIDEEISSQLASLPGVLSVRPDPDFNSLKKDY 158
C IDEE S + LPGVL V PD + KDY
Sbjct: 142 CTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 174
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 168 SSGLQTRTNMLFPAGNSKHWLVRMDKPGVEVVTKAQIVDYYAQILTKVMGNEKDAQMCIY 227
S+ + R ++ P + HWL+ M+ P ++ Q++D Y L V+G+ ++A+ +Y
Sbjct: 71 SNSNEQRETIMLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLNTLATVLGSMEEAKKNMY 130
Query: 228 HVSWKTNFGFCCELDEDCAQDLAGVPGVSSVQPDDNFESENKNY 271
S T GF C +DE+ ++ G+PGV V PD + +NK+Y
Sbjct: 131 AFSTTTYTGFQCTIDEETSEKFKGLPGVLWVLPDSYIDVKNKDY 174
>At3g23830 glycine-rich RNA binding protein, putative
Length = 136
Score = 75.5 bits (184), Expect = 5e-14
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 279 NSSEASQEASLR--TKKLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYA 336
N S SLR + KLFV GLS+ T + +L+ AF FGE+ + VI D+ + RS+G+
Sbjct: 20 NGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFG 79
Query: 337 FIEYTTEEAAGAALKEMNGKIINGWMIVVDVA--KTNPPRFNRG 378
F+ ++ E++A A+KEM+GK +NG I V++A +++ PR + G
Sbjct: 80 FVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPRSSFG 123
>At4g13850 glycine-rich RNA-binding protein AtGRP2 - like
Length = 158
Score = 75.1 bits (183), Expect = 6e-14
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 289 LRTKKLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGA 348
L + KLF+ GLS+ T + +LR AF FG++V KVI+D+ + RS+G+ F+ + E AA A
Sbjct: 32 LMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATA 91
Query: 349 ALKEMNGKIINGWMIVVDVAKTNP 372
A+ EM+GK +NG I V+ A P
Sbjct: 92 AISEMDGKELNGRHIRVNPANDRP 115
>At5g06210 unknown protein
Length = 146
Score = 73.2 bits (178), Expect = 2e-13
Identities = 34/77 (44%), Positives = 53/77 (68%)
Query: 293 KLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGAALKE 352
KLF+ GLSF T+E+ L AF G++V+ ++++D++S RSKG+ F+ + + + A AL E
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALME 94
Query: 353 MNGKIINGWMIVVDVAK 369
NG+ +NG I VD AK
Sbjct: 95 FNGQQLNGRTIFVDYAK 111
>At5g47320 40S ribosomal protein S19
Length = 212
Score = 72.4 bits (176), Expect = 4e-13
Identities = 37/103 (35%), Positives = 66/103 (63%), Gaps = 1/103 (0%)
Query: 270 NYEDSLSVPNSSEASQEASLRTKKLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKIS 329
+++ ++VP SS + TK L++ GLS T E +L+ AF F + + +V+ +K++
Sbjct: 10 HWKQGVNVPVSSMLGSLRYMSTK-LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVT 68
Query: 330 KRSKGYAFIEYTTEEAAGAALKEMNGKIINGWMIVVDVAKTNP 372
RS+GY F+ + +E++A +A+ MNG+ +NG+ I V+VAK P
Sbjct: 69 GRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKDWP 111
>At4g20030 putative protein
Length = 115
Score = 71.6 bits (174), Expect = 7e-13
Identities = 34/71 (47%), Positives = 51/71 (70%)
Query: 299 LSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGAALKEMNGKII 358
L F TSE L+ F FGE+ +VK+I D+ KRSKGYAFI++T+++ A A++ M+ ++
Sbjct: 10 LPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMY 69
Query: 359 NGWMIVVDVAK 369
NG MI +D+AK
Sbjct: 70 NGRMIYIDIAK 80
>At5g61030 RNA-binding protein - like
Length = 309
Score = 70.5 bits (171), Expect = 1e-12
Identities = 34/99 (34%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 270 NYEDSLSVPNSSEASQEASLRTKKLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKIS 329
N + SLS P+ +A + + + KLF+ G+++ E +LR AF +GE+V +VI+D+ +
Sbjct: 20 NAQVSLSSPSLFQAIR--CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRET 77
Query: 330 KRSKGYAFIEYTTEEAAGAALKEMNGKIINGWMIVVDVA 368
RS+G+ F+ +T+ EAA +A++ ++G+ ++G ++ V+ A
Sbjct: 78 GRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYA 116
>At5g54580 unknown protein
Length = 156
Score = 70.5 bits (171), Expect = 1e-12
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 294 LFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGAALKEM 353
LFV+GLS T+ + LR AF FGE+ KV+ D++S SKG+ F+ Y T E + + M
Sbjct: 58 LFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGM 117
Query: 354 NGKIINGWMIVVDVAK 369
+GK ++GW+I + A+
Sbjct: 118 DGKFLDGWVIFAEYAR 133
>At3g46020 RNA binding protein -like
Length = 102
Score = 70.5 bits (171), Expect = 1e-12
Identities = 33/77 (42%), Positives = 56/77 (71%)
Query: 293 KLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGAALKE 352
+LFV+ LS YT++++LR F FG++ + ++I D ++R KG+ FI + +E+ A ALK
Sbjct: 8 QLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKS 67
Query: 353 MNGKIINGWMIVVDVAK 369
++GKI++G +I V+VAK
Sbjct: 68 LDGKIVDGRLIFVEVAK 84
>At3g26420 RNA-binding protein, putative
Length = 245
Score = 68.9 bits (167), Expect = 4e-12
Identities = 33/77 (42%), Positives = 52/77 (66%)
Query: 293 KLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGAALKE 352
+ F+ GL++ TS++ LR AFE +G LV+ KV++DK S RS+G+ FI + ++A A+
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 353 MNGKIINGWMIVVDVAK 369
MNG ++G I VD A+
Sbjct: 68 MNGMDLDGRTITVDKAQ 84
>At2g22090 putative RNA-binding protein
Length = 343
Score = 68.2 bits (165), Expect = 7e-12
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 27/179 (15%)
Query: 230 SWKTNFGFCCELDEDCAQDLAGVPGVSSVQPDDNFESENKNYED-----SLSVPNSSE-- 282
S TNF ++++ Q + P SS D+ +SE+ N D L P S +
Sbjct: 16 SKSTNFDKKQKINKQQQQPESSTPYSSSSSSSDSSDSESDNEFDPEELRELLQPYSKDQL 75
Query: 283 ----------------ASQEASLRT---KKLFVTGLSFYTSEKTLRAAFEGFGELVQVKV 323
A EA+ R +K+FV GL + T+ +TL FEG+GE+ + V
Sbjct: 76 VDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFEGYGEIEECTV 135
Query: 324 IIDKISKRSKGYAFIEYTTEEAAGAALKEMNGKIINGWMIVVDVAKTNPPRFNRGHARP 382
+IDK + ++KG+ F+ + T + A ALKE +I+N +A P +GH +P
Sbjct: 136 VIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNR-TATCQLASMGPAASGKGHDQP 193
>At3g15000 unknown protein
Length = 395
Score = 65.1 bits (157), Expect = 6e-11
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 73 HWMVLMDKPPLGVISKSQVIDYYVKTLQTVMGSEKEAQMCLYDASWDTHFGFCCDIDEEI 132
HW+V+++ PP G ++ ++ID Y+KTL ++GSE EA+M +Y S ++ F + E++
Sbjct: 99 HWLVVVE-PPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDL 157
Query: 133 SSQLASLPGVLSVRPDPDFNSLKKDY 158
S +L L V V PD + KDY
Sbjct: 158 SHKLKELSNVRWVLPDSYLDVRNKDY 183
Score = 57.0 bits (136), Expect = 2e-08
Identities = 31/98 (31%), Positives = 54/98 (54%), Gaps = 1/98 (1%)
Query: 174 RTNMLFPAGNSKHWLVRMDKPGVEVVTKAQIVDYYAQILTKVMGNEKDAQMCIYHVSWKT 233
+ +L + +HWLV ++ P E T+ +I+D Y + L +++G+E +A+M IY VS +
Sbjct: 87 KETILLDGCDFEHWLVVVEPPQGEP-TRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRC 145
Query: 234 NFGFCCELDEDCAQDLAGVPGVSSVQPDDNFESENKNY 271
+ F + ED + L + V V PD + NK+Y
Sbjct: 146 YYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDY 183
>At1g72530 DAG-like protein
Length = 188
Score = 64.7 bits (156), Expect = 8e-11
Identities = 42/133 (31%), Positives = 71/133 (52%), Gaps = 4/133 (3%)
Query: 16 SQVHQLPTNITLPNKSYHSNLPSSSSSSISCNRFFTIIAAAAATTYPSFTPSTTHNRHWM 75
+++ + P N+T + S L S +S S N T + + PS + +HW+
Sbjct: 2 ARIIRRPLNLTAAVRFRLSPLSPFSGNSGSINSETT--SWSELIRVPSLVEGCDY-KHWL 58
Query: 76 VLMDKPPLGVISKSQVIDYYVKTLQTVMGSEKEAQMCLYDASWDTHFGFCCDIDEEISSQ 135
VLM KPP G +++ ++ +V+TL +GSE+EA+ +Y S ++ F C I E ++ +
Sbjct: 59 VLM-KPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRIHEPLTYK 117
Query: 136 LASLPGVLSVRPD 148
+ SLP V V PD
Sbjct: 118 IRSLPDVKWVLPD 130
Score = 51.6 bits (122), Expect = 7e-07
Identities = 29/87 (33%), Positives = 42/87 (47%), Gaps = 1/87 (1%)
Query: 185 KHWLVRMDKPGVEVVTKAQIVDYYAQILTKVMGNEKDAQMCIYHVSWKTNFGFCCELDED 244
KHWLV M KP T+ IV + + L +G+E++A+ IY VS K + F C + E
Sbjct: 55 KHWLVLM-KPPNGYPTRNHIVQSFVETLAMALGSEEEAKRSIYSVSTKYYYAFGCRIHEP 113
Query: 245 CAQDLAGVPGVSSVQPDDNFESENKNY 271
+ +P V V PD + Y
Sbjct: 114 LTYKIRSLPDVKWVLPDSFIVDGDNRY 140
>At1g74230 putative RNA-binding protein
Length = 289
Score = 64.3 bits (155), Expect = 1e-10
Identities = 37/105 (35%), Positives = 62/105 (58%), Gaps = 2/105 (1%)
Query: 279 NSSEASQEASLRTKKLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFI 338
+SS + + K+FV G+S+ T E LR AF +GE+V K+I+D+ + RS+G+AF+
Sbjct: 21 SSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFV 80
Query: 339 EYTTEEAAGAALKEMNGKIINGWMIVVDVAKTNPPRF-NRGHARP 382
+T+ E A A+ +++G+ ++G I V+ A F RG P
Sbjct: 81 TFTSTEEASNAM-QLDGQDLHGRRIRVNYATERGSGFGGRGFGGP 124
>At4g39260 glycine-rich protein (clone AtGRP8)
Length = 169
Score = 63.2 bits (152), Expect = 2e-10
Identities = 29/78 (37%), Positives = 54/78 (69%)
Query: 293 KLFVTGLSFYTSEKTLRAAFEGFGELVQVKVIIDKISKRSKGYAFIEYTTEEAAGAALKE 352
+ FV GL++ T+++ L+ F FG+++ K+I D+ S RS+G+ F+ + E+A A++E
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 353 MNGKIINGWMIVVDVAKT 370
MNGK ++G +I V+ A++
Sbjct: 67 MNGKELDGRVITVNEAQS 84
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.316 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,955,302
Number of Sequences: 26719
Number of extensions: 382038
Number of successful extensions: 1595
Number of sequences better than 10.0: 218
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1266
Number of HSP's gapped (non-prelim): 354
length of query: 384
length of database: 11,318,596
effective HSP length: 101
effective length of query: 283
effective length of database: 8,619,977
effective search space: 2439453491
effective search space used: 2439453491
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0095c.6