BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0083.16
(294 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56140 RNA-binding protein-like 421 e-118
At4g26480 putative protein 419 e-118
At3g08620 unknown protein 280 9e-76
At2g38610 putative RNA-binding protein 268 3e-72
At1g09660 elongation factor like protein 262 2e-70
At5g51300 unknown protein 103 1e-22
At1g09670 unknown protein 70 2e-12
At2g28140 unknown protein 35 0.037
At3g32940 hypothetical protein 32 0.31
At5g42750 unknown protein 31 0.90
At1g12360 unknown protein (At1g12360) 30 1.2
At5g08420 rev interacting protein mis3 - like 30 1.5
At4g17880 putative transcription factor BHLH4 28 4.5
At5g05680 unknown protein 28 5.9
At1g73130 hypothetical protein 28 5.9
At1g62390 putative protein 28 5.9
At5g57350 plasma membrane ATPase 3 (proton pump) (sp|P20431) 28 7.6
At5g27030 unknown protein 28 7.6
At4g37180 putative cytoskeletal protein 28 7.6
At4g16620 membrane protein homolog 28 7.6
>At5g56140 RNA-binding protein-like
Length = 315
Score = 421 bits (1082), Expect = e-118
Identities = 216/296 (72%), Positives = 245/296 (81%), Gaps = 7/296 (2%)
Query: 2 MSSSGAGRYMAFPPS----PSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFM 57
+ G GR+M + S PSAP SP+ SG + SS EQ+KYL+ELL ERH L PF+
Sbjct: 21 IGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFL 80
Query: 58 AVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQS 117
VLPH +RL+NQEILRVTTLL NA+VL QS L+H SPLA+GGIF N AD+NGWAS+F S
Sbjct: 81 PVLPHAFRLLNQEILRVTTLLENATVLSQSGLDHPSPLASGGIFQNARADMNGWASQFPS 140
Query: 118 EMPSLLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVE 177
E + SS P+WL+ GSSSGL+ K+T+RVDIPV+ YPNFNFVGRLLGPRGNSLKRVE
Sbjct: 141 ERS--VPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVE 198
Query: 178 ASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREI 237
ASTDCRVLIRGRGSIKDP KEEMMRGKPGYEHLNEPLH+LVEAE P EI+DARLMQAREI
Sbjct: 199 ASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREI 258
Query: 238 LEDLLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTR 293
L+DLL P++E+ D YKKQQLRELALLNGTLREEGSPMSGSVSP+ NSLGMKRAKTR
Sbjct: 259 LDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313
>At4g26480 putative protein
Length = 555
Score = 419 bits (1078), Expect = e-118
Identities = 215/294 (73%), Positives = 246/294 (83%), Gaps = 9/294 (3%)
Query: 5 SGAGRYMAFPPS----PSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVL 60
SG GR++ +PP PSAP SP+ SG + S L EQ+KYL+ELL ERH L PF+ VL
Sbjct: 267 SGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVL 326
Query: 61 PHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQSEMP 120
PH RL+NQEILRVTTLL NA L QSR +H SPLA+GGIF N AD+NGWAS+F SE
Sbjct: 327 PHVCRLMNQEILRVTTLLENA--LSQSRFDHPSPLASGGIFQNSRADMNGWASQFPSERS 384
Query: 121 SLLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEAST 180
+ SS P+WL+ GSSSGL+VK+T+RVDIPV+ YPN+NFVGRLLGPRGNSLKRVEAST
Sbjct: 385 --VSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEAST 442
Query: 181 DCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILED 240
DCRVLIRGRGSIKDP KE+MMRGKPGYEHLNEPLH+LVEAE P EI+DARLMQAREIL+D
Sbjct: 443 DCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDD 502
Query: 241 LLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 294
LL PV+E+ D+YKKQQLRELALLNG+LREEGSPMSGS+SP+ NSLGMKRAKTRG
Sbjct: 503 LLTPVEETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 555
>At3g08620 unknown protein
Length = 283
Score = 280 bits (715), Expect = 9e-76
Identities = 153/291 (52%), Positives = 190/291 (64%), Gaps = 14/291 (4%)
Query: 5 SGAGRYMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCY 64
SG Y F PS +A P +R+ +S +Y+++LL E LGPFM VLP C
Sbjct: 2 SGLYNYNNFSPSRAASPQ-----IRTPSSDV---DSQYISQLLAEHQKLGPFMQVLPICS 53
Query: 65 RLINQEILRVTTLLGNASVLGQSRLEHASP--LATGGIFSN-GGADVNGWASRFQSEMPS 121
RL+NQEI R+T ++ N RL H SP +A+ + SN G + GW +
Sbjct: 54 RLLNQEIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGG 113
Query: 122 LLQSSATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTD 181
W S S VK+ +R+D+PV+ YPNFNFVGRLLGPRGNSLKRVEA+T
Sbjct: 114 --PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTG 171
Query: 182 CRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDL 241
CRV IRG+GSIKDP KEE ++GKPGYEHLNE LH+L+EA+ P +I+D +L QA+EI+E+L
Sbjct: 172 CRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 231
Query: 242 LKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLGMKRAKT 292
+KPVDESQDY K+QQLRELALLN LRE SGSVSPF NS MKR KT
Sbjct: 232 VKPVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281
>At2g38610 putative RNA-binding protein
Length = 286
Score = 268 bits (684), Expect = 3e-72
Identities = 151/283 (53%), Positives = 186/283 (65%), Gaps = 16/283 (5%)
Query: 16 SPSAPPSPHLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQEILRVT 75
SP+ SP + SS +YLTELL E L PFM VLP C RL+NQE+ RV+
Sbjct: 12 SPARAASPQIRSTPEIDSS------QYLTELLAEHQKLTPFMQVLPICSRLLNQEMFRVS 65
Query: 76 TLLGNASVLGQSRLEHASP--LATGGIFSN-GGADVNGWASRFQSEMPSLLQSSATPSWL 132
++ N RL H SP +A+ + SN + GW Q + T W
Sbjct: 66 GMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGT--PGMTMDWQ 123
Query: 133 SPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSI 192
GS S VK+ +R++IPV+ YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSI
Sbjct: 124 GAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSI 183
Query: 193 KDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILEDLLKPVDESQDYY 252
KDP KE+ +RG+PGYEHLNE LH+L+EA+ PA I++ RL QA+EI+E+LLKPVDESQD+
Sbjct: 184 KDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFI 243
Query: 253 KKQQLRELALLN-GTLREE--GSPMSGSVSPFHNSLGMKRAKT 292
K+QQLRELALLN LREE G GSVSPF++S KR KT
Sbjct: 244 KRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284
>At1g09660 elongation factor like protein
Length = 298
Score = 262 bits (669), Expect = 2e-70
Identities = 154/304 (50%), Positives = 203/304 (66%), Gaps = 21/304 (6%)
Query: 2 MSSSGAGRYMAFPP--SPSAPPSPHLSGLRSAASSAL---AEQDKYLTELLGERHILGPF 56
M SGAG ++A SP + LSG R++ + + +++++YLTELL ER LGPF
Sbjct: 1 MMESGAG-FVAMEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPF 59
Query: 57 MAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQ 116
+ V+P+C RL+N EI RV+ S R EH SP + G +NG D+ GW S Q
Sbjct: 60 LQVMPNCCRLLNHEIRRVS------SFPDLDRYEHGSPFRSLGQPTNGKLDLEGW-SMMQ 112
Query: 117 SEMPSLLQSSAT---PS---WLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRG 170
+E LQ ++ PS W+ G + +VKK +R+D+PV+ YP++NFVGR+LGPRG
Sbjct: 113 AEENCHLQRASPFRGPSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRG 172
Query: 171 NSLKRVEASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDAR 230
NSLKRVE +T CRV IRGRGS+KD KEE ++GKPGYEHL EPLHVL+EAE P +II++R
Sbjct: 173 NSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSR 232
Query: 231 LMQAREILEDLLKPVDESQDYYKKQQLRELALLNGTLREEG-SP-MSGSVSPFHNSLGMK 288
L A LE LLKP+DES D+YK++QL+ELA LNGTLREE SP +S +SP + K
Sbjct: 233 LEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNSK 292
Query: 289 RAKT 292
RAKT
Sbjct: 293 RAKT 296
>At5g51300 unknown protein
Length = 804
Score = 103 bits (257), Expect = 1e-22
Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 67 INQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQSEMPSLLQS- 125
+N +L ++ +L + L SP + ++ N G +N R + + Q
Sbjct: 161 LNSRLLEISRMLQSGMPLDDRPEGQRSP-SPEPVYDNMGIRINTREYRARERLNRERQEI 219
Query: 126 -----SATPSWLSPQGSSSGLVVKKTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEAST 180
P++ P + KK IP++ +P +NF+G ++GPRGN+ KR+E T
Sbjct: 220 IAQIIKKNPAFKPPADYRPPKLHKKLF---IPMKEFPGYNFIGLIIGPRGNTQKRMERET 276
Query: 181 DCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHVLVEAEFPAEIIDARLMQAREILED 240
+++IRG+GS+K+ + + + NE LHVLVEAE E ++A A ++E
Sbjct: 277 GAKIVIRGKGSVKE-GRHQQKKDLKYDPSENEDLHVLVEAE-TQEALEA----AAGMVEK 330
Query: 241 LLKPVDESQDYYKKQQLRELALLNGTLREE 270
LL+PVDE + +K+QQLRELA LNGT+R+E
Sbjct: 331 LLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
>At1g09670 unknown protein
Length = 118
Score = 69.7 bits (169), Expect = 2e-12
Identities = 49/123 (39%), Positives = 71/123 (56%), Gaps = 13/123 (10%)
Query: 2 MSSSGAGRYMAFPP--SPSAPPSPHLSGLRSAASSAL---AEQDKYLTELLGERHILGPF 56
M SGAG ++A SP + LSG R++ + + +++++YLTELL ER LGPF
Sbjct: 1 MMESGAG-FVAMEERISPGSFFQYPLSGFRASPNRSPCPPSDRERYLTELLQERQKLGPF 59
Query: 57 MAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQ 116
+ V+P+C RL+N EI RV +S R EH SP + G +NG D+ GW S Q
Sbjct: 60 LQVMPNCCRLLNHEIRRV------SSFPDLDRYEHGSPFRSLGQPTNGKLDLEGW-SMMQ 112
Query: 117 SEM 119
+E+
Sbjct: 113 AEV 115
>At2g28140 unknown protein
Length = 211
Score = 35.4 bits (80), Expect = 0.037
Identities = 20/59 (33%), Positives = 34/59 (56%), Gaps = 3/59 (5%)
Query: 228 DARLMQAREILEDLLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGSVSPFHNSLG 286
D ++MQ +++L +K DE+Q+ YK+ L + LL EE P +++ FH+S G
Sbjct: 52 DDQIMQLKDLLNKAIKEKDEAQERYKRILLDQNFLLQHQTDEEQDP---NINGFHSSDG 107
>At3g32940 hypothetical protein
Length = 590
Score = 32.3 bits (72), Expect = 0.31
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 145 KTMRVDIPVEVYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRG 188
K R+ I V+ + +F+F+ + G +G++ KR+E T +V I G
Sbjct: 116 KEARLPIDVKEHSDFSFLSLIFGSQGDTQKRLEKETGAKVQIFG 159
>At5g42750 unknown protein
Length = 337
Score = 30.8 bits (68), Expect = 0.90
Identities = 14/32 (43%), Positives = 20/32 (61%)
Query: 158 NFNFVGRLLGPRGNSLKRVEASTDCRVLIRGR 189
+++F L+GP GNS + S + R LIRGR
Sbjct: 233 SYSFSSSLMGPNGNSKTMINGSYNKRDLIRGR 264
>At1g12360 unknown protein (At1g12360)
Length = 666
Score = 30.4 bits (67), Expect = 1.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 103 NGGADVNGWASRFQSEMPSLLQSSATPSWLSPQGSSSGLVVKKTMR 148
+G ++ AS Q + ++S TP+W P+GS G +R
Sbjct: 548 HGSTSLSSAASSSQGQAAQSMRSRRTPTWAKPRGSDDGYSSDSVLR 593
>At5g08420 rev interacting protein mis3 - like
Length = 391
Score = 30.0 bits (66), Expect = 1.5
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 164 RLLGPRGNSLKRVEASTDCRVLIRG 188
RL+GP ++LK +E T+C +L++G
Sbjct: 162 RLVGPNSSTLKALEILTNCYILVQG 186
>At4g17880 putative transcription factor BHLH4
Length = 589
Score = 28.5 bits (62), Expect = 4.5
Identities = 22/72 (30%), Positives = 32/72 (43%), Gaps = 8/72 (11%)
Query: 78 LGNASVLGQSRLEHASPLATGGIFSNGGADVNGWASRFQSEMPSLLQSSATPS-WLS-PQ 135
LG++ ++ QS + + T F+NGG + WA + Q P W+S P
Sbjct: 230 LGSSEIIHQSS-DLVDKVDTFFNFNNGGGEFGSWAFNLNPD-----QGENDPGLWISEPN 283
Query: 136 GSSSGLVVKKTM 147
G SGLV M
Sbjct: 284 GVDSGLVAAPVM 295
>At5g05680 unknown protein
Length = 810
Score = 28.1 bits (61), Expect = 5.9
Identities = 16/68 (23%), Positives = 37/68 (53%), Gaps = 2/68 (2%)
Query: 24 HLSGLRSAASSALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQEILRVTTLLGNASV 83
H+S ++ +SSA+ ++++ + ++ + + GP + + PH L NQ ++ G + +
Sbjct: 563 HVSTDKTVSSSAIEKKEQENSCIISKELLAGPKIRIAPHA--LPNQRSTPANSVEGRSIL 620
Query: 84 LGQSRLEH 91
L +L H
Sbjct: 621 LDYVKLFH 628
>At1g73130 hypothetical protein
Length = 646
Score = 28.1 bits (61), Expect = 5.9
Identities = 23/84 (27%), Positives = 37/84 (43%), Gaps = 10/84 (11%)
Query: 157 PNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPAKEEMMRGKPGYEHLNEPLHV 216
P F +V RG S E + D ++GR + E P +++ + P HV
Sbjct: 42 PRFEYV------RGESK---EVAEDHSSNVQGRHDRVASPRSESPSDPPSHQNFDIPGHV 92
Query: 217 LVEAEFPAEIIDARLMQAREILED 240
LVE +I+ ++Q R+ ED
Sbjct: 93 LVEKRVQGDILKENVVQ-RDSFED 115
>At1g62390 putative protein
Length = 751
Score = 28.1 bits (61), Expect = 5.9
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Query: 47 LGERHILGPFMAVLPHCYRLINQEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGA 106
LG LG +A L C N VT+ +G+ S+ S + P + NGG+
Sbjct: 187 LGASAALGGPIAGLGPCLPSRNVHKKGVTSPVGSVSLPNASNGKVERPQVVNPVTENGGS 246
Query: 107 DVNGWASRFQSEMPSLLQSSATPSWLSPQGSSSGLVVKK 145
G ASR + S S S + GSSS VV K
Sbjct: 247 VSKGQASRVVLKPVS---HSPKGSKVEELGSSSVAVVGK 282
>At5g57350 plasma membrane ATPase 3 (proton pump) (sp|P20431)
Length = 949
Score = 27.7 bits (60), Expect = 7.6
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 223 PAEIIDARLMQAREILEDLLKPVDESQDYYKKQQLRELALLNGTLREEGSPMSGS 277
P +I+D L AR DL K V + D Y ++ LR LA+ T+ E+ SGS
Sbjct: 427 PEQILD--LCNARA---DLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKESSGS 476
>At5g27030 unknown protein
Length = 1108
Score = 27.7 bits (60), Expect = 7.6
Identities = 15/40 (37%), Positives = 22/40 (54%)
Query: 8 GRYMAFPPSPSAPPSPHLSGLRSAASSALAEQDKYLTELL 47
G ++ FPP P+A + L+ +AAS A A Q +T L
Sbjct: 233 GPHVPFPPGPAAANAGALASWMAAASGASAVQAAVVTPAL 272
>At4g37180 putative cytoskeletal protein
Length = 356
Score = 27.7 bits (60), Expect = 7.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 34 SALAEQDKYLTELLGERHILGPFMAVLPHCYRLINQEI 71
S L+E D Y+ +L ER+ + F LP C L+N+ I
Sbjct: 40 SKLSEIDGYVGKLEEERNKIDVFKRELPLCMLLLNEAI 77
>At4g16620 membrane protein homolog
Length = 359
Score = 27.7 bits (60), Expect = 7.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 69 QEILRVTTLLGNASVLGQSRLEHASPLATGGIFSNGGADVNGW 111
Q L+ + +G+ASV+G L + L GG+ S GG N W
Sbjct: 232 QYALKGSMEMGSASVIGLGHLVGYAIL--GGLVSGGGLSFNAW 272
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.315 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,674,707
Number of Sequences: 26719
Number of extensions: 287880
Number of successful extensions: 1095
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1064
Number of HSP's gapped (non-prelim): 25
length of query: 294
length of database: 11,318,596
effective HSP length: 99
effective length of query: 195
effective length of database: 8,673,415
effective search space: 1691315925
effective search space used: 1691315925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0083.16