BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0067a.8
(611 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g16680 putative non-LTR retroelement reverse transcriptase 135 5e-32
At2g17910 putative non-LTR retroelement reverse transcriptase 133 3e-31
At2g25550 putative non-LTR retroelement reverse transcriptase 127 1e-29
At2g31520 putative non-LTR retroelement reverse transcriptase 124 2e-28
At3g45550 putative protein 123 3e-28
At2g31080 putative non-LTR retroelement reverse transcriptase 121 1e-27
At2g45230 putative non-LTR retroelement reverse transcriptase 119 4e-27
At3g32110 non-LTR reverse transcriptase, putative 119 5e-27
At2g41580 putative non-LTR retroelement reverse transcriptase 115 9e-26
At2g15510 putative non-LTR retroelement reverse transcriptase 115 9e-26
At2g17610 putative non-LTR retroelement reverse transcriptase 112 5e-25
At2g07650 putative non-LTR retrolelement reverse transcriptase 108 7e-24
At4g29090 putative protein 105 1e-22
At4g08830 putative protein 97 2e-20
At2g05200 putative non-LTR retroelement reverse transcriptase 91 2e-18
At1g24640 hypothetical protein 90 3e-18
At4g10830 putative protein 84 2e-16
At3g44650 putative protein 84 3e-16
At1g25430 hypothetical protein 83 5e-16
At1g47850 hypothetical protein 81 2e-15
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 135 bits (341), Expect = 5e-32
Identities = 107/415 (25%), Positives = 176/415 (41%), Gaps = 55/415 (13%)
Query: 223 GEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICK 282
G+ +L AL P V ++ F++P G+ + +M +F W +I W+ +++
Sbjct: 740 GKEILLKSIALALP-VYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFSNKIHWIGGKKLTL 798
Query: 283 PKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIE-------SP 335
PK GG G KD FN A+L K WR D+ S+ Q+ K++Y + S
Sbjct: 799 PKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNTDFLNARQGTRPSY 858
Query: 336 WWRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDW--SGKGKLDGRYHRLYNLSRQ 393
WR + R + G GL +++GNG+ T W++ W G + H L N+
Sbjct: 859 TWRSILYGRELLNG------GLKRLIGNGEQTNVWIDKWLFDGHSRRPMNLHSLMNI-HM 911
Query: 394 KYSRIVDMGEWVGAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRWPPNS 453
K S ++D + W NL + + +K + + + + D + W +
Sbjct: 912 KVSHLIDP---LTRNW--------NLKKLTELFHEKDVQLIMHQRPLISSEDSYCWAGTN 960
Query: 454 EGFYTVNNAY----------LFMQGD-EGEPDAALKRLWAAPVPSNVKAFAWKLMLNRIP 502
G YTV + Y LF + D + ++W+ +K F WK + +
Sbjct: 961 NGLYTVKSGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVFMWKALKGALA 1020
Query: 503 CRQQLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRLNSIYAPSLGP 562
+L+ RG+ A C C EE+ET HL+ C +W L+ I AP+ G
Sbjct: 1021 VEDRLRSRGIRTAD---GCLFCKEEIETINHLLFQCPFARQVW-----ALSLIQAPATGF 1072
Query: 563 ISEHFLHFPHHGRNATQ----RH-GEYAVWLALTWSVWLLRNEILF-GTAVYDQE 611
+ F + H +N+ RH + W L W +W RN+ LF GT + E
Sbjct: 1073 GTSIFSNINHVIQNSQNFGIPRHMRTVSPW--LLWEIWKNRNKTLFQGTGLTSSE 1125
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 133 bits (334), Expect = 3e-31
Identities = 111/413 (26%), Positives = 175/413 (41%), Gaps = 54/413 (13%)
Query: 216 AKAFIFRGEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWV 275
AK G+ +L AL P V +S FK+P + ++ +M +F W ++R+I W+
Sbjct: 759 AKTLSQGGKEVLLKSIALALP-VYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWL 817
Query: 276 SWERICKPKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESP 335
SW+R+ PKD GG G KD FN A+L K WR L + SL+ +V +++Y + +
Sbjct: 818 SWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSAT 877
Query: 336 -WWRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDW--SGKGKLDGRYHRLYNLSR 392
R A R + G GL V+GNG T W + W G + R N+
Sbjct: 878 RGSRPSYAWRSILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVD- 936
Query: 393 QKYSRIVDMGEWVGAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQN----RSDVWR 448
K S+++D W + R+L W E++L Q + D +
Sbjct: 937 LKVSQLID-----PTSRNWNLNMLRDLFP----WKDV------EIILKQRPLFFKEDSFC 981
Query: 449 WPPNSEGFYTVNNAYLFM---------QGDEGEP--DAALKRLWAAPVPSNVKAFAWKLM 497
W + G Y+V Y F+ Q + +P ++ ++W ++ F WK +
Sbjct: 982 WLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKAL 1041
Query: 498 LNRIPCRQQLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLW------EACNTR 551
IP +L+ RG+ +SD C +C E ET H++ C +W A +
Sbjct: 1042 HGAIPVEDRLRTRGI---RSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSEF 1098
Query: 552 LNSIYAPSLGPIS-EHFLHFPHHGRNATQRHGEYAVWLALTWSVWLLRNEILF 603
NS+Y I PHH R + W + W +W RN +LF
Sbjct: 1099 SNSVYTNMSRLIDLTQQNDLPHHLRFVSP-------W--ILWFLWKNRNALLF 1142
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 127 bits (320), Expect = 1e-29
Identities = 99/396 (25%), Positives = 175/396 (44%), Gaps = 33/396 (8%)
Query: 223 GEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICK 282
G+ ++ AL P V +S FK+P G+ E + ++ NF W + +R I WV+W+R+
Sbjct: 1170 GKEIMLKSVALAMP-VYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQY 1228
Query: 283 PKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPWWRDVQA 342
K GGLG +D FN A+L K WR + NSL+ +V+KA+Y + I+++ +
Sbjct: 1229 SKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSY 1288
Query: 343 ARVD-MGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSR-QKYSRIVD 400
+ GI + G ++G+G + + L++ +D R N K I +
Sbjct: 1289 GWASLLDGIALLKKGTRHLIGDGQNIRIGLDN-----IVDSHPPRPLNTEETYKEMTINN 1343
Query: 401 MGEWVGAGWRWKFS-WRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRWPPNSEGFYTV 459
+ E G+ + W S + + + G++ ++ + + D W N+ G YTV
Sbjct: 1344 LFERKGSYYFWDDSKISQFVDQSDHGFIHRI------YLAKSKKPDKIIWNYNTTGEYTV 1397
Query: 460 NNAYLFMQGDEGEPDAALK----------RLWAAPVPSNVKAFAWKLMLNRIPCRQQLQR 509
+ Y + D A+ R+W P+ +K F W+ + + ++L
Sbjct: 1398 RSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTT 1457
Query: 510 RGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRL--NSIYAPSLGPISEHF 567
RG+ + D SC CH E E+ H + +C W ++ L N + + +
Sbjct: 1458 RGM---RIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNI 1514
Query: 568 LHFPHHGRNATQRHGEYAVWLALTWSVWLLRNEILF 603
L+F + H VW L W +W RN ++F
Sbjct: 1515 LNFV-QDTTMSDFHKLLPVW--LIWRIWKARNNVVF 1547
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 124 bits (311), Expect = 2e-28
Identities = 98/396 (24%), Positives = 174/396 (43%), Gaps = 33/396 (8%)
Query: 223 GEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICK 282
G+ ++ AL P V +S FK+P G+ E + ++ NF W + +R I WV+W+R+
Sbjct: 944 GKEIMLKSVALAMP-VYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQY 1002
Query: 283 PKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPWWRDVQA 342
K GGLG +D FN A+L K WR + NSL+ +V+KA+Y + I+++ +
Sbjct: 1003 SKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSY 1062
Query: 343 ARVD-MGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSR-QKYSRIVD 400
+ GI + G ++G+G + + L++ +D R N K I +
Sbjct: 1063 GWASLLDGIALLKKGTRHLIGDGQNIRIGLDN-----IVDSHPPRPLNTEETYKEMTINN 1117
Query: 401 MGEWVGAGWRWKFS-WRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRWPPNSEGFYTV 459
+ E G+ + W S + + + G++ ++ + + D W N+ G YTV
Sbjct: 1118 LFERKGSYYFWDDSKISQFVDQSDHGFIHRI------YLAKSKKPDKIIWNYNTTGEYTV 1171
Query: 460 NNAYLFMQGDEGEPDAALK----------RLWAAPVPSNVKAFAWKLMLNRIPCRQQLQR 509
+ Y + D A+ R+W P+ +K F W+ + + ++L
Sbjct: 1172 RSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTT 1231
Query: 510 RGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRL--NSIYAPSLGPISEHF 567
RG+ + D C CH E E+ H + +C W ++ L N + + +
Sbjct: 1232 RGM---RIDPICPRCHRENESINHALFTCPFATMAWWLSDSSLIRNQLMSNDFEENISNI 1288
Query: 568 LHFPHHGRNATQRHGEYAVWLALTWSVWLLRNEILF 603
L+F + H VW L W +W RN ++F
Sbjct: 1289 LNFV-QDTTMSDFHKLLPVW--LIWRIWKARNNVVF 1321
>At3g45550 putative protein
Length = 851
Score = 123 bits (309), Expect = 3e-28
Identities = 104/404 (25%), Positives = 173/404 (42%), Gaps = 49/404 (12%)
Query: 223 GEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICK 282
G+ +L AL P V +S FK+P G+ E + ++ NF W + +R I WV+W+R+
Sbjct: 409 GKEILLKSVALAMP-VYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRLQY 467
Query: 283 PKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRII-------ESP 335
K GGLG +D FN A+L K WR + NSL+ +V+KA+Y + II +S
Sbjct: 468 SKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQSY 527
Query: 336 WWRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKY 395
W + + GI G V+G+G + + +++ +D R Q
Sbjct: 528 GWSSL------LSGIALLRKGTRYVIGDGKTIRLGIDN-----VVDSHPPRPLLTDEQHN 576
Query: 396 SRIVD-MGEWVGAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWR--WPPN 452
+D + + G W +A+ + +V + + + + + RS R W N
Sbjct: 577 GLSLDNLFQHRGHSRCWD-------NAKLQTFVDQSDHDYIKRIYLSTRSKTDRLIWSYN 629
Query: 453 SEGFYTVNNAYLFMQGD-----------EGEPDAALKRLWAAPVPSNVKAFAWKLMLNRI 501
S G YTV + Y D G D K +W P+ +K F W+++ +
Sbjct: 630 STGDYTVRSGYWLSTHDPSNTIPTMAKPHGSVDLKTK-IWNLPIMPKLKHFLWRILSKAL 688
Query: 502 PCRQQLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRLNSIYAPSL- 560
P +L RG+ + D C C E E+ H + +C W +T L Y S+
Sbjct: 689 PTTDRLTTRGM---RIDPGCPRCRRENESINHALFTCPFATMAWRLSDTPL---YRSSIL 742
Query: 561 -GPISEHFLHFPHHGRNATQRHGEYAVWLALTWSVWLLRNEILF 603
I ++ + +N T + + L W +W RN ++F
Sbjct: 743 SNNIEDNISNILLLLQNTTITDSQKLIPFWLLWRIWKARNNVVF 786
>At2g31080 putative non-LTR retroelement reverse transcriptase
Length = 1231
Score = 121 bits (303), Expect = 1e-27
Identities = 93/334 (27%), Positives = 147/334 (43%), Gaps = 38/334 (11%)
Query: 229 SKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGG 288
+K L S V +S +PV R FLWG + E+++ +SW +ICKPK GG
Sbjct: 656 TKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGG 715
Query: 289 LGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPW----------WR 338
+GL+ N A++ K WR L D SLW +V++ KY + G + ++ W WR
Sbjct: 716 IGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY-KVGGVQDTSWLKPQPRWSSTWR 774
Query: 339 DVQAA--RVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKYS 396
V V + G+ W V G+G + +FWL+ W L L +
Sbjct: 775 SVAVGLREVVVKGVGW-------VPGDGCTIRFWLDRW----LLQEPLVELGTDMIPEGE 823
Query: 397 RI-VDMGEWV-GAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRWPPNSE 454
RI V W+ G+GW + L V++ V V + N ++ W +
Sbjct: 824 RIKVAADYWLPGSGWNLEI-----LGLYLPETVKRRLLSVVVQVFLGNGDEI-SWKGTQD 877
Query: 455 GFYTVNNAYLFMQGDEGE---PDAALKRLWAAPVPSNVKAFAWKLMLNRIPCRQQLQRRG 511
G +TV +AY +QGD G+ + R+W P V+ F W + N I + RR
Sbjct: 878 GAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNVIMTNVERVRRH 937
Query: 512 VIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLW 545
+ + C++C+ ET H++ C + +W
Sbjct: 938 L---SENAICSVCNGAEETILHVLRDCPAMEPIW 968
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 119 bits (299), Expect = 4e-27
Identities = 95/415 (22%), Positives = 164/415 (38%), Gaps = 63/415 (15%)
Query: 223 GEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICK 282
G+ +L A+ P +S FKIP + ++ + +M F W E R + W +W + +
Sbjct: 788 GKEILLKAVAMALPTYT-MSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWKAWCHLSR 846
Query: 283 PKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPW------ 336
PK GGLG K+ FN A+LGK WR + + +SL +V K++Y + +P
Sbjct: 847 PKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRPSF 906
Query: 337 -WRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSG-----KGKLDGRYHRLYNL 390
W+ + A+V + G+ V+GNG++ W + W G + R H +
Sbjct: 907 AWKSIYEAQV------LIKQGIRAVIGNGETINVWTDPWIGAKPAKAAQAVKRSHLVSQY 960
Query: 391 SRQKYSRIVDMGEWVGAGWRWKF-------SWRRNLSAREKGWVQKMCEEVGEVVLVQNR 443
+ + D+ G W W + + N+ A G +
Sbjct: 961 AANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGG--------------KET 1006
Query: 444 SDVWRWPPNSEGFYTVNNAYLFMQ---GDEGEP--------DAALKRLWAAPVPSNVKAF 492
D + W + G Y+V + Y M P D +++W VP + F
Sbjct: 1007 RDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHF 1066
Query: 493 AWKLMLNRIPCRQQLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRL 552
W+ + N + L R + + SC C ET HL+ C W +
Sbjct: 1067 LWRCVNNCLSVASNLAYRHL---AREKSCVRCPSHGETVNHLLFKCPFARLTW-----AI 1118
Query: 553 NSIYAPSLGPISEHFLHFPHH----GRNATQRHGEYAVWLALTWSVWLLRNEILF 603
+ + AP G +E HH ++ + +A+ + W +W RN+++F
Sbjct: 1119 SPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVF 1173
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 119 bits (298), Expect = 5e-27
Identities = 88/341 (25%), Positives = 152/341 (43%), Gaps = 23/341 (6%)
Query: 215 KAKAFIFRGEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAW 274
K + F G L +K L S V +S K+P ++ FLWG + E+++
Sbjct: 1319 KGRMLSFAGRLTL-TKAVLTSILVHTMSTIKLPQSTLDGLDKVSRAFLWGSTLEKKKQHL 1377
Query: 275 VSWERICKPKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKY------DQP 328
V+W R+C P+ GGLG++ N A++ K WR L D +SLW QV+++KY D+
Sbjct: 1378 VAWTRVCLPRREGGLGIRSATAMNKALIAKVGWRVLNDGSSLWAQVVRSKYKVGDVHDRN 1437
Query: 329 GRIIESPWWRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLY 388
+ +S W ++ V + + W E V+G+G +FW + W + +
Sbjct: 1438 WTVAKSNWSSTWRSVGVGLRDVIWREQHW--VIGDGRQIRFWTDRWLSETPIADDSIVPL 1495
Query: 389 NLSRQKYSRIVDMGEWVGAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWR 448
+L+ Q D+ WR W + A +++ V V D
Sbjct: 1496 SLA-QMLCTARDL-------WRDGTGWDMSQIAPFVTDNKRLDLLAVIVDSVTGAHDRLA 1547
Query: 449 WPPNSEGFYTVNNAYLFMQGDEG---EPDAALKRLWAAPVPSNVKAFAWKLMLNRIPCRQ 505
W S+G +TV +A+ + D+ + + R+W P V+ F W ++ I
Sbjct: 1548 WGMTSDGRFTVKSAFAMLTNDDSPRQDMSSLYGRVWKVQAPERVRVFLWLVVNQAIMTNS 1607
Query: 506 QLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLWE 546
+ +RR + D SDV C +C +E+ H++ C + G+W+
Sbjct: 1608 ERKRRHLCD--SDV-CQVCRGGIESILHVLRDCPAMSGIWD 1645
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 115 bits (287), Expect = 9e-26
Identities = 96/411 (23%), Positives = 183/411 (44%), Gaps = 50/411 (12%)
Query: 216 AKAFIFRGEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWV 275
AK G+ +L A+ P V ++ F++ + + +M +F W ++++I W+
Sbjct: 510 AKTLSQGGKDILLKSIAMAFP-VYAMTCFRLSKTLCTKLTSVMMDFWWNSVQDKKKIHWI 568
Query: 276 SWERICKPKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIE-S 334
+++ PK GG G KD FN A+L K R D++SL Q++K++Y + +
Sbjct: 569 GAQKLMLPKFLGGFGFKDLQCFNQALLAKQASRLHTDSDSLLSQILKSRYYMNSDFLSAT 628
Query: 335 PWWRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLS--- 391
R A + + G +GL K++GNG++T W+++W D + R +L
Sbjct: 629 KGTRPSYAWQSILYGRELLVSGLKKIIGNGENTYVWMDNWI----FDDKPRRPESLQIMV 684
Query: 392 --RQKYSRIVDMGEWVGAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRW 449
+ K S+++D W + R+L ++ +Q +C++ + +R D + W
Sbjct: 685 DIQLKVSQLID-----PFSRNWNLNMLRDLFPWKE--IQIICQQRP----MASRQDSFCW 733
Query: 450 PPNSEGFYTVNNAY----------LFMQGDEGEP--DAALKRLWAAPVPSNVKAFAWKLM 497
+ G YTV + Y +F + +E +P + ++W +K F WK++
Sbjct: 734 FGTNHGLYTVKSEYDLCSRQVHKQMFKEAEE-QPSLNPLFGKIWNLNSAPKIKVFLWKVL 792
Query: 498 LNRIPCRQQLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRLNSIYA 557
+ +L+ RGV+ + C++C E+ ET H++ C +W L + +
Sbjct: 793 KGAVAVEDRLRTRGVL---IEDGCSMCPEKNETLNHILFQCPLARQVW-----ALTPMQS 844
Query: 558 PSLGPISEHFLHFPH-----HGRNATQRHGEYAVWLALTWSVWLLRNEILF 603
P+ G F + H H + + W + W +W RN+ LF
Sbjct: 845 PNHGFGDSIFTNVNHVIGNCHNTELSPHLRYVSPW--IIWILWKNRNKRLF 893
>At2g15510 putative non-LTR retroelement reverse transcriptase
Length = 1138
Score = 115 bits (287), Expect = 9e-26
Identities = 91/346 (26%), Positives = 149/346 (42%), Gaps = 34/346 (9%)
Query: 230 KCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGL 289
K ++ V +S FK+ K M +F W +R+ WVSWE++C K+ GGL
Sbjct: 570 KAVAMAMQVYAMSCFKLTKTTCKNLTSAMSDFWWNALEHKRKTHWVSWEKLCLAKESGGL 629
Query: 290 GLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPWW-RDVQAARVDMG 348
G +D FN A+L K WR L + L+ + K++Y +E+ R A +
Sbjct: 630 GFRDIESFNQALLAKQSWRILQYPSFLFARFFKSRYFDDEEFLEADLGVRPSYACCSILF 689
Query: 349 GINWFEAGLAKVVGNGDSTQFWLEDW--SGKGKLDGRYHRLYNLSRQKYSRIVDMGEWVG 406
G GL K VGNG S W++ W +L + H NL K + +++ +
Sbjct: 690 GRELLAKGLRKEVGNGKSLNVWMDPWIFDIAPRLPLQRHFSVNLD-LKVNDLINFED--- 745
Query: 407 AGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRWPPNSEGFYTVNNAY--- 463
W+R+L E+ + E + + V N D W W G Y+V + Y
Sbjct: 746 ------RCWKRDL--LEELFYPTDVELITKRNPVVNMDDFWVWLHAKTGEYSVKSGYWLA 797
Query: 464 -------LFMQGDEGEPDAALK-RLWAAPVPSNVKAFAWKLMLNRIPCRQQLQRRGVIDA 515
L Q + LK ++W+ +K F W+++ +P Q+ RRG+
Sbjct: 798 FQSNKLDLIQQANLLPSTNGLKEQVWSTKSSPKIKMFLWRILSAALPVADQIIRRGM--- 854
Query: 516 QSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRLNSIYAPSLG 561
D C +C +E E++ H++ +CS +W L+ + P G
Sbjct: 855 SIDPRCQICGDEGESTNHVLFTCSMARQVW-----ALSGVPTPEFG 895
>At2g17610 putative non-LTR retroelement reverse transcriptase
Length = 773
Score = 112 bits (281), Expect = 5e-25
Identities = 92/387 (23%), Positives = 158/387 (40%), Gaps = 52/387 (13%)
Query: 241 LSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGLGLKDWLPFNTA 300
+S F +P+ + + M F W + + +I WV+W ++ PK GGL ++D FN A
Sbjct: 260 MSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKLNDPKKMGGLAIRDLKDFNIA 319
Query: 301 VLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIES-PWWRDVQAARVDMGGINWFEAGLAK 359
+L K WR L SL +V KAKY R++++ + A + + G GL
Sbjct: 320 LLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSSYAWKSILHGTKLISRGLKY 379
Query: 360 VVGNGDSTQFWLEDW-------SGKGKLDGRYHRLYNLSRQKYSRIVDMGEWVGAGWRWK 412
+ GNG++ Q W ++W G D Y +L K S ++ G W
Sbjct: 380 IAGNGNNIQLWKDNWLPLNPPRPPVGTCDSIYSQL------KVSDLLIEGRW-------- 425
Query: 413 FSWRRNLSAREKGWVQKMCEEVGEV-VLVQNRSDVWRWPPNSEGFYTVNNAYLFMQGDEG 471
N K Q + + + +D W +G Y+V + Y ++
Sbjct: 426 -----NEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQ 480
Query: 472 EPDAAL------------KRLWAAPVPSNVKAFAWKLMLNRIPCRQQLQRRGVIDAQSDV 519
+ A+L +W P +K F W+ N +P L+RR +I +D
Sbjct: 481 QQHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLI---TDD 537
Query: 520 SCALCHEEVETSAHLMLSCSKVLGLWEACNTRL---NSIYAPSLGPISEHFLHFPHHGRN 576
+C C E E HL+ C +WE + +L +S+ + S E R
Sbjct: 538 TCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSARK 597
Query: 577 ATQRHGEYAVWLALTWSVWLLRNEILF 603
+ +++ + W +W +RN+++F
Sbjct: 598 ------DVSLFPFIGWRIWKMRNDLIF 618
>At2g07650 putative non-LTR retrolelement reverse transcriptase
Length = 732
Score = 108 bits (271), Expect = 7e-24
Identities = 84/343 (24%), Positives = 142/343 (40%), Gaps = 56/343 (16%)
Query: 229 SKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGG 288
+K L S V +S +P ++ +FLWG S +R+ +SW+R+CKP+ GG
Sbjct: 318 TKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGG 377
Query: 289 LGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPG---------RIIESPWWRD 339
LG++ N A+L K WR + D +SLW ++++ Y R + S WR
Sbjct: 378 LGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRCNYRVQDVRDGAWTKVRSVCSSTWRS 437
Query: 340 VQAA--RVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKYSR 397
V V + G++W V+G+G FW++ W L+ +
Sbjct: 438 VALGMREVVIPGLSW-------VIGDGREILFWMDKW---------------LTNIPLAE 475
Query: 398 IVDMGEWVGAGWRWKFSWRRNLSAREKGW-VQKMCEEVGEVVLVQNRS----------DV 446
++ G WK R+L GW + + + +Q +S D
Sbjct: 476 LLVQEPPAG----WKGMRARDLRRNGIGWDMATIAPYISSYNRLQLQSFVLDDITGARDR 531
Query: 447 WRWPPNSEGFYTVNNAYLFMQGDEGEPDAALK----RLWAAPVPSNVKAFAWKLMLNRIP 502
W + +G + V+ Y F+ DE P +K R+W+ P V+ F W + I
Sbjct: 532 ISWGESQDGRFKVSTTYSFLTRDEA-PRQDMKRFFDRVWSVTAPERVRLFLWLVAQQAIM 590
Query: 503 CRQQLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLGLW 545
Q+ RR + + C +C E+ H++ C + G+W
Sbjct: 591 TNQERHRRHL---STTTICQVCKGAKESIIHVLRDCPAMEGIW 630
>At4g29090 putative protein
Length = 575
Score = 105 bits (261), Expect = 1e-22
Identities = 89/392 (22%), Positives = 162/392 (40%), Gaps = 52/392 (13%)
Query: 241 LSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGLGLKDWLPFNTA 300
++ F +P V K+ ++ +F W E + + W +W+ + K GG+G KD FN A
Sbjct: 8 MACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLA 67
Query: 301 VLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPW-------WRDVQAARVDMGGINWF 353
+LGK WR L SL +V K++Y + +P W+ + A++
Sbjct: 68 LLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQ------EIL 121
Query: 354 EAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKY---SRIVDMGEWVGAGWR 410
G VVGNG+ W W K R+ + Q+Y S I+ + + + R
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWL-DSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGR 180
Query: 411 WKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRS------DVWRWPPNSEGFYTVNNAYL 464
WR+++ ++ + EV ++ + R D + W S G YTV + Y
Sbjct: 181 ---EWRKDV-------IEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYW 230
Query: 465 FM-----------QGDEGEPDAALKRLWAAPVPSNVKAFAWKLMLNRIPCRQQLQRRGVI 513
+ + E + +++W + ++ F WK + N +P L R +
Sbjct: 231 VLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLS 290
Query: 514 DAQSDVSCALCHEEVETSAHLMLSCSKVLGLW--EACNTRLNSIYAPSLGPISEHFLHFP 571
+ + C C E V HL+ C+ W + L +A S+ ++ +++
Sbjct: 291 KESACIRCPSCKETVN---HLLFKCTFARLTWAISSIPIPLGGEWADSI-YVNLYWVFNL 346
Query: 572 HHGRNATQRHGEYAVWLALTWSVWLLRNEILF 603
+G ++ + W L W +W RNE++F
Sbjct: 347 GNGNPQWEKASQLVPW--LLWRLWKNRNELVF 376
>At4g08830 putative protein
Length = 947
Score = 97.4 bits (241), Expect = 2e-20
Identities = 87/338 (25%), Positives = 137/338 (39%), Gaps = 59/338 (17%)
Query: 215 KAKAFIFRGEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAW 274
K ++ F G L + P + +S +P + ++ FL G S E++++
Sbjct: 457 KGRSLSFAGRLTLTKSVLSLIP-IHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHL 515
Query: 275 VSWERICKPKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIES 334
V+W+R+C PK GGLG++ N A++ K WR + D SLW +++++KY
Sbjct: 516 VAWDRVCLPKSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRSKY--------- 566
Query: 335 PWWRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQK 394
V V G W VVGNG FW ++W L R + + +K
Sbjct: 567 ----RVGLREVVSRGSRW-------VVGNGRDILFWSDNWLSHEALINR-AVIEIPNSEK 614
Query: 395 YSRIVDMGEWV-GAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVL--VQNRSDVWRWPP 451
R+ D+ W G GW+ L E E+ VV+ V D W
Sbjct: 615 ELRVKDL--WANGLGWK--------LDKIEPYISYHTRLELAAVVVDSVTGARDRLSWGY 664
Query: 452 NSEGFYTVNNAY-LFMQGDEGEPDAA--LKRLWAAPVPSNVKAFAWKLMLNRIPCRQQLQ 508
+++G +TV +AY L + + P+ A RLW VK F W +
Sbjct: 665 SADGVFTVKSAYRLLTEDHDPRPNMAAFFDRLWRVVALERVKTFLWHI------------ 712
Query: 509 RRGVIDAQSDVS-CALCHEEVETSAHLMLSCSKVLGLW 545
D S C +C ET H++ C + G+W
Sbjct: 713 --------GDTSVCQVCKGGDETILHVLKDCPSIAGIW 742
>At2g05200 putative non-LTR retroelement reverse transcriptase
Length = 1229
Score = 90.5 bits (223), Expect = 2e-18
Identities = 77/331 (23%), Positives = 128/331 (38%), Gaps = 37/331 (11%)
Query: 230 KCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGL 289
K L S + +S FK+P + ++ Q ++ F W P+ R+ +WV+W ++ PK+ GGL
Sbjct: 689 KAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGL 748
Query: 290 GLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIE-------SPWWRDVQA 342
G +D N ++L K WR L SL +++ KY +E S WR + A
Sbjct: 749 GFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGWRSIIA 808
Query: 343 ARVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGK-LDGRYHRLYNLSRQKYSRIVDM 401
R + GL ++ NG+ W + W K L L + S +++
Sbjct: 809 GR------EILKEGLGWLITNGEKVSIWNDPWLSISKPLVPIGPALREHQDLRVSALINQ 862
Query: 402 GEWVGAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRWPPNSEGFYTVNN 461
+W ++ + + ++++ V D W P G YT +
Sbjct: 863 NT-----LQWDWNKIAVILPNYENLIKQLPAPSSRGV------DKLAWLPVKSGQYTSRS 911
Query: 462 AY-LFMQGDEGEPDAAL---KRLWAAPVPSNVKAFAWKLMLNRIPCRQQLQRRGVIDAQS 517
Y + P LW +K WK + +P QL RR + +
Sbjct: 912 GYGIASVASIPIPQTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPS-- 969
Query: 518 DVSCALCHE--EVETSAHLMLSCSKVLGLWE 546
A CH E++ HL C +WE
Sbjct: 970 ----AACHRCGAPESTTHLFFHCEFAAQVWE 996
>At1g24640 hypothetical protein
Length = 1270
Score = 90.1 bits (222), Expect = 3e-18
Identities = 95/424 (22%), Positives = 155/424 (36%), Gaps = 113/424 (26%)
Query: 223 GEGLLDSKCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICK 282
G+ +L AL P V +S FK+P+ + + M +F W R+I W SWER+C
Sbjct: 751 GKEVLLKSVALAMP-VFAMSCFKLPITTCENLESAMASFWWDSCDHSRKIHWQSWERLCL 809
Query: 283 PKDFGGLGLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIE-------SP 335
PKD GGLG +D FN A+L K WR L + L +++K++Y ++ S
Sbjct: 810 PKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFLDAALSQRPSF 869
Query: 336 WWRDVQAARVDMGGINWFEAGLAKVVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKY 395
WR + + G GL K VG+G S W++ W
Sbjct: 870 GWRSI------LFGRELLSKGLQKRVGDGASLFVWIDPW--------------------- 902
Query: 396 SRIVDMGEWVGAGWRWKFSWRRN------------LSAREKGWVQKMCEE---------V 434
I D G ++ WR+N L+ R W +++ + +
Sbjct: 903 --IDDNG--------FRAPWRKNLIYDVTLKVKALLNPRTGFWDEEVLHDLFLPEDILRI 952
Query: 435 GEVVLVQNRSDVWRWPPNSEGFYTVNNAYLFMQGDEGE----------PDAALK-RLWAA 483
+ V +++D + W N G ++V +AY + + LK ++W
Sbjct: 953 KAIKPVISQADFFVWKLNKSGDFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNL 1012
Query: 484 PVPSNVKAFAWKLMLNRIPCRQQLQRRGVIDAQSDVSCALCHEEVETSAHLMLSCSKVLG 543
+K F WK +C E E++ H + C
Sbjct: 1013 QTDPKIKIFLWK---------------------------VCGELGESTNHTLFLCPLSRQ 1045
Query: 544 LWEACNTRLNSIYAP----SLGPISEHFLHFPHHGRNATQRHGEYAVWLALTWSVWLLRN 599
+W L+ P S G I + H + N ++ + W +W RN
Sbjct: 1046 IW-----ALSDYPFPPDGFSNGSIYSNINHLLENKDNKEWPINLRKIFPWILWRIWKNRN 1100
Query: 600 EILF 603
+F
Sbjct: 1101 SFIF 1104
>At4g10830 putative protein
Length = 1294
Score = 84.3 bits (207), Expect = 2e-16
Identities = 43/136 (31%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
Query: 230 KCALVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGL 289
K +S V +S FK+P+ + E + ++ NF W + ++R I W++W+R+ K GGL
Sbjct: 1156 KSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKREIPWIAWKRLQYSKKEGGL 1215
Query: 290 GLKDWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPWWRDVQAARVDM-G 348
G +D FN A+L K WR + + NSL+ +++KA+Y + I+++ R M
Sbjct: 1216 GFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARYFREDSILDAKRQRYQSYGWTSMLA 1275
Query: 349 GINWFEAGLAKVVGNG 364
G++ + G +VG+G
Sbjct: 1276 GLDVIKKGSRFIVGDG 1291
>At3g44650 putative protein
Length = 762
Score = 83.6 bits (205), Expect = 3e-16
Identities = 79/334 (23%), Positives = 135/334 (39%), Gaps = 48/334 (14%)
Query: 240 FLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGLGLKDWLPFNT 299
+LS F++P +E +++ +FLW G+ + A +SW ++CKPK GGLGL+ N
Sbjct: 378 WLSAFQLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEAND 437
Query: 300 AVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPWWRDVQAARVDMGGINWFE----A 355
K WR + +SLW K+ + + +W + ++G W +
Sbjct: 438 VCCLKLVWRIISHGDSLW-----VKWVEHNLLKREIFW--IVKENANLGSWIWKKILKYR 490
Query: 356 GLAK-----VVGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKYSRIVDMGEWVGAGWR 410
G+AK VGNG+ST FW +DWS G+L + +DMG +
Sbjct: 491 GVAKRFCKAEVGNGESTSFWFDDWSLLGRL---------IDVAGIRGTIDMG--ISRTMS 539
Query: 411 WKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWR-------WPPNSEGF---YTVN 460
+W S R + Q++ + EV+ Q++ + W ++ + ++
Sbjct: 540 VADAW---TSRRRRHHRQEILNTIEEVLSTQHQKRTQQQQQGRVLWKGKNDIYKDKFSTK 596
Query: 461 NAYLFMQGDEGEPDAALKRLWAAPVPSNVKAFAWKLMLNRIP--CRQQLQRRGVIDAQSD 518
N + +++ E A K +W W +R+ R RG
Sbjct: 597 NTWNYLRTTSNEV-AWHKGVWFPHATPKYSFCLWLAAHDRLATGARMIKWNRG-----ET 650
Query: 519 VSCALCHEEVETSAHLMLSCSKVLGLWEACNTRL 552
C C + +ET HL + L +C RL
Sbjct: 651 GDCTFCRQGIETRDHLFFMQLHIGSLDSSCQRRL 684
>At1g25430 hypothetical protein
Length = 1213
Score = 82.8 bits (203), Expect = 5e-16
Identities = 90/336 (26%), Positives = 134/336 (39%), Gaps = 52/336 (15%)
Query: 240 FLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGLGLKDWLPFNT 299
++S F +P G K + + FLW G+ E+ + VSW +C PK GGLGL+ L +N
Sbjct: 818 WMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNK 877
Query: 300 AVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPWWRDVQAARVDMGGINWFEAGLAK 359
+ + WR +SLW A + + +W V+ + D +W L
Sbjct: 878 TLSMRLIWRLFVAKDSLW-----ADWQHLHHLSRGSFWA-VEGGQSD----SWTWKRLLS 927
Query: 360 V-----------VGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKYSRIVDMGEWVGA- 407
+ VGNG +W ++W+ G L R+ R+ + + A
Sbjct: 928 LRPLAHQFLVCKVGNGLKADYWYDNWTSLGPL----FRIIGDIGPSSLRVPLLAKVASAF 983
Query: 408 ---GWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRSDVWRWPPNS---EGFYTVNN 461
GWR S SA KG +C V Q D + W N +GF
Sbjct: 984 SEDGWRLPVS----RSAPAKGIHDHLC-TVPVPSTAQEDVDRYEWSVNGFLCQGFSAAKT 1038
Query: 462 AYLFMQGDEGEPDAALKRLWAAPV--PSNVKAFA---WKLMLNRIPCRQQLQRRGVIDAQ 516
+ P A +K WA+ + V +A W LNR+ RQ+L G I Q
Sbjct: 1039 ------WEAIRPKATVKS-WASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHI--Q 1089
Query: 517 SDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRL 552
SD +C LC E+ HL+L C +W R+
Sbjct: 1090 SD-ACVLCSFASESRDHLLLICEFSAQVWRLVFRRI 1124
>At1g47850 hypothetical protein
Length = 799
Score = 80.9 bits (198), Expect = 2e-15
Identities = 79/341 (23%), Positives = 136/341 (39%), Gaps = 45/341 (13%)
Query: 233 LVSPAVLFLSYFKIPVGVEKECQRIMWNFLWGGSPEERRIAWVSWERICKPKDFGGLGLK 292
+VS + ++S +++P G KE +++ FLW G + A ++W +CK K GGLG+K
Sbjct: 391 IVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIK 450
Query: 293 DWLPFNTAVLGKCCWRYLCDTNSLWCQVIKAKYDQPGRIIESPWWRDVQAARVDMGGINW 352
L N K WR + +SLW + + G S W + R +G W
Sbjct: 451 SLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKG----SFWSAN---DRSSLGSWMW 503
Query: 353 --------FEAGLAKV-VGNGDSTQFWLEDWSGKGKLDGRYHRLYNLSRQKYSRIVDMGE 403
+ KV + +G ST FW ++WS G+L + R +DMG
Sbjct: 504 KKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQL---------VDVTNARRTIDMGI 554
Query: 404 WVGAGWRWKFSWRRNLSAREKGWVQKMCEEVGEVVLVQNRS---DVWRWPPNSEGF---- 456
+ A + R R + E + +L + RS D++ W + + F
Sbjct: 555 PLAATVATVLASHRTKHHRTA--IYNKIEAEIQSILQRERSGAPDIFLWRSSGDNFRQSF 612
Query: 457 ---YTVNNAYLFMQGDEGEPDAALKRLWAAPVPSNVKAFAWKLMLNRIPCRQQLQRRGVI 513
T +N + + K +W + W + +R+ ++++
Sbjct: 613 ITKVTWHNIRVIHTHRQW-----YKGVWFSYNTPKYSFLLWLAIHDRLSTGDRIKK---W 664
Query: 514 DAQSDVSCALCHEEVETSAHLMLSCSKVLGLWEACNTRLNS 554
++ V+C LC E+ HL SC +W+ RL S
Sbjct: 665 NSGQQVNCVLCGNVEESRNHLFFSCHYTTAIWDNLTRRLLS 705
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.336 0.146 0.539
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,787,260
Number of Sequences: 26719
Number of extensions: 648589
Number of successful extensions: 2100
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1846
Number of HSP's gapped (non-prelim): 152
length of query: 611
length of database: 11,318,596
effective HSP length: 105
effective length of query: 506
effective length of database: 8,513,101
effective search space: 4307629106
effective search space used: 4307629106
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0067a.8