Lotus
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0066.6
         (137 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g59880 actin depolymerizing factor 3 - like protein                236  2e-63
At3g46000 actin depolymerizing factor 2 (ADF2)                        236  2e-63
At3g46010 actin depolymerizing factor 1 (ADF1)                        224  1e-59
At5g59890 actin depolymerizing factor 4 - like protein                224  1e-59
At5g52360 actin depolymerizing factor-like                            213  3e-56
At4g00680 putative actin-depolymerizing factor                        210  2e-55
At1g01750 actin depolymerizing factor like protein                    208  6e-55
At4g25590 actin depolymerizing factor - like protein                  203  3e-53
At2g31200 actin depolymerizing factor 6 (ADF6)                        166  5e-42
At2g16700 actin depolymerizing factor 5 (ADF5)                        158  1e-39
At4g34970 actin depolymerizing factor - like protein                  157  2e-39
At3g45990 actin depolymerising like protein                           153  3e-38
At3g18330 hypothetical protein                                         31  0.18
At2g07130 hypothetical protein                                         30  0.30
At3g09720 RNA helicase like protein                                    30  0.39
At3g04680 unknown protein                                              29  0.67
At1g63450 unknown protein                                              27  4.3
At4g12020 putative disease resistance protein                          26  5.6
At3g62170 PECTINESTERASE-like protein                                  26  5.6
At5g53960 unknown protein                                              26  7.4

>At5g59880 actin depolymerizing factor 3 - like protein
          Length = 139

 Score =  236 bits (603), Expect = 2e-63
 Identities = 113/139 (81%), Positives = 130/139 (93%), Gaps = 2/139 (1%)

Query: 1   MANAASGMAVHDDCKLRFMELKTKRTYRFIVYKIED--KQVIVEKLGEPGQGYEDFTANL 58
           MANAASGMAVHDDCKL+FMELKTKRT+RFI+YKIE+  KQVIVEK+GEPGQ +ED  A+L
Sbjct: 1   MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60

Query: 59  PADECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIE 118
           PADECRYA++DF++++   VP+SRIFF+AWSPDT+RVRSKMIYASSKDRFKRELDGIQ+E
Sbjct: 61  PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 119 LQATDPTEMGLDVFKSRAN 137
           LQATDPTEM LDVFKSRAN
Sbjct: 121 LQATDPTEMDLDVFKSRAN 139


>At3g46000 actin depolymerizing factor 2 (ADF2)
          Length = 137

 Score =  236 bits (603), Expect = 2e-63
 Identities = 112/137 (81%), Positives = 125/137 (90%)

Query: 1   MANAASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDKQVIVEKLGEPGQGYEDFTANLPA 60
           MANAASGMAVHDDCKL+FMELK KRT+R IVYKIEDKQVIVEKLGEP Q Y+DF A+LPA
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPA 60

Query: 61  DECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQ 120
           D+CRY +YDF+++T  N  KS+IFFIAWSPDT++VR KMIYASSKDRFKRELDGIQ+ELQ
Sbjct: 61  DDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPTEMGLDVFKSRAN 137
           ATDPTEMGLDVFKSR N
Sbjct: 121 ATDPTEMGLDVFKSRTN 137


>At3g46010 actin depolymerizing factor 1 (ADF1)
          Length = 139

 Score =  224 bits (571), Expect = 1e-59
 Identities = 109/139 (78%), Positives = 125/139 (89%), Gaps = 2/139 (1%)

Query: 1   MANAASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDKQ--VIVEKLGEPGQGYEDFTANL 58
           MANAASGMAVHDDCKLRF+ELK KRT+RFIVYKIE+KQ  V+VEK+G+P Q YE+F A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 59  PADECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIE 118
           PADECRYA+YDF+++T  N  KS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 119 LQATDPTEMGLDVFKSRAN 137
           LQATDPTEM LDVF+SRAN
Sbjct: 121 LQATDPTEMDLDVFRSRAN 139


>At5g59890 actin depolymerizing factor 4 - like protein
          Length = 139

 Score =  224 bits (570), Expect = 1e-59
 Identities = 110/139 (79%), Positives = 123/139 (88%), Gaps = 2/139 (1%)

Query: 1   MANAASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDKQ--VIVEKLGEPGQGYEDFTANL 58
           MANAASGMAVHDDCKLRF+ELK KRT+RFIVYKIE+KQ  VIVEK+GEP   YEDF A+L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 59  PADECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIE 118
           PADECRYA+YDF+++T  N  KS+IFFIAW PD ++VRSKMIYASSKDRFKRELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 119 LQATDPTEMGLDVFKSRAN 137
           LQATDPTEM LDV KSR N
Sbjct: 121 LQATDPTEMDLDVLKSRVN 139


>At5g52360 actin depolymerizing factor-like
          Length = 137

 Score =  213 bits (541), Expect = 3e-56
 Identities = 98/136 (72%), Positives = 119/136 (87%)

Query: 1   MANAASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDKQVIVEKLGEPGQGYEDFTANLPA 60
           MANAASGMAV D+CKL+F+ELK KR YRFI+++I+ +QV+VEKLG P + Y+DFT  LP 
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  DECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQ 120
           +ECRYAVYDF++ T  N+ KS+IFFIAWSPD+SRVR KM+YASSKDRFKRELDGIQ+ELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDPTEMGLDVFKSRA 136
           ATDP+EM LD+ KSRA
Sbjct: 121 ATDPSEMSLDIIKSRA 136


>At4g00680 putative actin-depolymerizing factor
          Length = 140

 Score =  210 bits (535), Expect = 2e-55
 Identities = 98/139 (70%), Positives = 122/139 (87%), Gaps = 2/139 (1%)

Query: 1   MANAASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDK--QVIVEKLGEPGQGYEDFTANL 58
           MAN+ASGM V+D+CK++F+ELK KRTYRFIV+KI++K  QV +EKLG P + Y+DFT+++
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 59  PADECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIE 118
           P DECRYAVYDF++ TE N  KS+IFFIAWSPDTSRVRSKM+YASSKDRFKRE++GIQ+E
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 119 LQATDPTEMGLDVFKSRAN 137
           LQATDP+EM LD+ K R N
Sbjct: 121 LQATDPSEMSLDIIKGRLN 139


>At1g01750 actin depolymerizing factor like protein
          Length = 140

 Score =  208 bits (530), Expect = 6e-55
 Identities = 98/139 (70%), Positives = 119/139 (85%), Gaps = 2/139 (1%)

Query: 1   MANAASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDK--QVIVEKLGEPGQGYEDFTANL 58
           MAN+ASGM V D+CKL+F+ELK KR YRFIV+KI++K  QV+++KLG P + YEDFT ++
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 59  PADECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIE 118
           P DECRYAVYD+++ T  N  KS+IFFIAWSPDTSRVRSKM+YASSKDRFKRELDGIQ+E
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 119 LQATDPTEMGLDVFKSRAN 137
           LQATDP+EM LD+ K R N
Sbjct: 121 LQATDPSEMSLDIIKGRVN 139


>At4g25590 actin depolymerizing factor - like protein
          Length = 130

 Score =  203 bits (516), Expect = 3e-53
 Identities = 91/129 (70%), Positives = 116/129 (89%)

Query: 8   MAVHDDCKLRFMELKTKRTYRFIVYKIEDKQVIVEKLGEPGQGYEDFTANLPADECRYAV 67
           MAV D+CKL+F+ELK+KR YRFI+++I+ +QV+VEKLG P + Y+DFTA+LPA+ECRYAV
Sbjct: 1   MAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPANECRYAV 60

Query: 68  YDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQATDPTEM 127
           +DF+++T+ N  KS+IFFIAWSPD+SRVR KM+YASSKDRFKRELDGIQ+ELQATDP+EM
Sbjct: 61  FDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEM 120

Query: 128 GLDVFKSRA 136
             D+ KSRA
Sbjct: 121 SFDIIKSRA 129


>At2g31200 actin depolymerizing factor 6 (ADF6)
          Length = 146

 Score =  166 bits (419), Expect = 5e-42
 Identities = 75/137 (54%), Positives = 107/137 (77%), Gaps = 2/137 (1%)

Query: 3   NAASGMAVHDDCKLRFMELKTKRTYRFIVYKIED--KQVIVEKLGEPGQGYEDFTANLPA 60
           NA SGM V D+ K  F+EL+ K+T+R++V+KI++  K+V+VEK G P + Y+DF A+LP 
Sbjct: 10  NAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPD 69

Query: 61  DECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQ 120
           ++CRYAVYDF+++T  N  KS+IFF AWSP TS +R+K++Y++SKD+  REL GI  E+Q
Sbjct: 70  NDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQ 129

Query: 121 ATDPTEMGLDVFKSRAN 137
           ATDPTE+ L+V + RAN
Sbjct: 130 ATDPTEVDLEVLRERAN 146


>At2g16700 actin depolymerizing factor 5 (ADF5)
          Length = 143

 Score =  158 bits (399), Expect = 1e-39
 Identities = 72/135 (53%), Positives = 103/135 (75%), Gaps = 2/135 (1%)

Query: 4   AASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDK--QVIVEKLGEPGQGYEDFTANLPAD 61
           A +GM V D+C   FM++K K+ +R+IV+KIE+K  +V V+K+G  G+ Y D   +LP D
Sbjct: 8   ATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVD 67

Query: 62  ECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQA 121
           +CRYAV+DF+++T  N  KS+IFFIAWSP+ S++R+K++YA+SKD  +R L+GI  ELQA
Sbjct: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQA 127

Query: 122 TDPTEMGLDVFKSRA 136
           TDPTEMG D+ + RA
Sbjct: 128 TDPTEMGFDIIQDRA 142


>At4g34970 actin depolymerizing factor - like protein
          Length = 130

 Score =  157 bits (396), Expect = 2e-39
 Identities = 71/127 (55%), Positives = 96/127 (74%), Gaps = 2/127 (1%)

Query: 12  DDCKLRFMELKTKRTYRFIVYKIEDK--QVIVEKLGEPGQGYEDFTANLPADECRYAVYD 69
           DDCK  FME+K K+ +R++VYK+E+K  +V V+K+G  G+ Y+D  A+LP D+CRYAV+D
Sbjct: 3   DDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFD 62

Query: 70  FEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQATDPTEMGL 129
           F+Y+T  N   S+IFFI WSP+ SR+R KM+YA+SK   +R LDG+  ELQATDPTEMG 
Sbjct: 63  FDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGF 122

Query: 130 DVFKSRA 136
           D  + RA
Sbjct: 123 DKIQDRA 129


>At3g45990 actin depolymerising like protein
          Length = 133

 Score =  153 bits (386), Expect = 3e-38
 Identities = 82/138 (59%), Positives = 99/138 (71%), Gaps = 13/138 (9%)

Query: 8   MAVHDDCKLRFMELKTKRTYRFIVYKIEDK-QVIVEKL------GEPGQGYEDFTANLPA 60
           M +HDDCKL F+ELK +RT+R IVYKIED  QVIVEK       GE  Q YE+F  +LPA
Sbjct: 1   MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLPA 60

Query: 61  DECRYAVYDFEYLTEGNVPKSR-IFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIEL 119
           DECRYA+ D E+     VP  R I FIAWSP T+++R KMIY+S+KDRFKRELDGIQ+E 
Sbjct: 61  DECRYAILDIEF-----VPGERKICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEF 115

Query: 120 QATDPTEMGLDVFKSRAN 137
            ATD T++ LD  + R N
Sbjct: 116 HATDLTDISLDAIRRRIN 133


>At3g18330 hypothetical protein
          Length = 376

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 40  IVEKLGEPGQGYEDFTANLPADECR--YAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRS 97
           +  K+ +  +G   +T  L  D  R  +A++   +L +    K  I  ++W  D    +S
Sbjct: 278 VTNKIDDTTEGAVSWTKVLELDLSRELHALFTSNFLVDEE-KKVFICCVSWKEDEDENKS 336

Query: 98  KMIYASSKDRFKRELDGIQIELQATDPTEMGLDV 131
             +Y   +D   +E+D  +      +PT + L V
Sbjct: 337 NKVYIVGEDNIVKEIDSGEDATSGCEPTILSLYV 370


>At2g07130 hypothetical protein
          Length = 209

 Score = 30.4 bits (67), Expect = 0.30
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 40  IVEKLGEPGQGYEDFTANLPADECR--YAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRS 97
           +  K+ +  +G   +T  L  D  R   A++   +L +    K  I  ++W  D    +S
Sbjct: 111 VTNKIDDTTEGAVSWTKVLVLDLSRDLQALFTSNFLVDEE-KKVFICCVSWKEDEDENKS 169

Query: 98  KMIYASSKDRFKRELDGIQIELQATDPTEMGLDV 131
           K +Y   +D   +E+D  +      +PT + L V
Sbjct: 170 KKVYIVGEDNRVKEIDSGEDATSGCEPTILSLYV 203


>At3g09720 RNA helicase like protein
          Length = 541

 Score = 30.0 bits (66), Expect = 0.39
 Identities = 19/66 (28%), Positives = 32/66 (47%), Gaps = 10/66 (15%)

Query: 70  FEYLTEGNVPKSRI-FFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIELQATDPTEMG 128
           F+  TE +    ++ FF+    DT +  ++ +  SSK R +R  + + +E         G
Sbjct: 26  FKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVSSKKRKRRSSNSVPVE---------G 76

Query: 129 LDVFKS 134
            DVFKS
Sbjct: 77  FDVFKS 82


>At3g04680 unknown protein
          Length = 444

 Score = 29.3 bits (64), Expect = 0.67
 Identities = 17/38 (44%), Positives = 24/38 (62%), Gaps = 2/38 (5%)

Query: 67  VYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMIYASS 104
           V  F Y+TE NV K +I ++A SP T  + SK++ A S
Sbjct: 402 VSGFVYVTEVNVQKKKITYLAPSPGT--LPSKLLVAGS 437


>At1g63450 unknown protein
          Length = 641

 Score = 26.6 bits (57), Expect = 4.3
 Identities = 23/89 (25%), Positives = 36/89 (39%), Gaps = 17/89 (19%)

Query: 46  EPGQGYEDFTANLPADECRYAVYDFEYLTEGNVPKSRIFFI-AWSPDTSRVRSKM----- 99
           +P   Y  +T +LP D  RY+V    Y+ + +V   R+  I      T R R  M     
Sbjct: 548 DPYSAYYQYTWHLPEDHRRYSV----YINKEDVKLKRVNVIEKLMSKTLREREDMRSYIV 603

Query: 100 -------IYASSKDRFKRELDGIQIELQA 121
                  +Y  S  +F+R  D   I + +
Sbjct: 604 HELLPGLVYGDSNAKFERFRDAFDITMDS 632



 Score = 25.4 bits (54), Expect = 9.6
 Identities = 12/37 (32%), Positives = 20/37 (53%), Gaps = 3/37 (8%)

Query: 73  LTEGNVPKSRI---FFIAWSPDTSRVRSKMIYASSKD 106
           L + ++PK+ I   F I W P+T   R +   A ++D
Sbjct: 189 LDQDSLPKNEIDQDFIIDWDPETGEERYRYFKAKTED 225


>At4g12020 putative disease resistance protein
          Length = 1895

 Score = 26.2 bits (56), Expect = 5.6
 Identities = 15/48 (31%), Positives = 24/48 (49%), Gaps = 1/48 (2%)

Query: 40  IVEKLGEPGQGYEDFTANLPADECRYAVYDFEYLTEGN-VPKSRIFFI 86
           +V + G      EDF ++L A  CR  +  +E   E + +PK R+  I
Sbjct: 670 VVIRYGRADISNEDFISHLRASLCRRGISVYEKFNEVDALPKCRVLII 717


>At3g62170 PECTINESTERASE-like protein
          Length = 588

 Score = 26.2 bits (56), Expect = 5.6
 Identities = 15/42 (35%), Positives = 22/42 (51%), Gaps = 12/42 (28%)

Query: 5   ASGMAVHDDCKLRFMELKTKRTYRFIVYKIEDKQVIVEKLGE 46
           A+  AV D CK            R ++Y +ED + IVE++GE
Sbjct: 108 ATSKAVLDYCK------------RVLMYALEDLETIVEEMGE 137


>At5g53960 unknown protein
          Length = 189

 Score = 25.8 bits (55), Expect = 7.4
 Identities = 17/81 (20%), Positives = 35/81 (42%), Gaps = 5/81 (6%)

Query: 41  VEKLGEPGQGYEDFTANLPADECRYAVYDFEYLTEGNVPKSRIFFIAWSPDTSRVRSKMI 100
           +EKL +  +  E+   N       Y +Y F    E             + DT  + +K++
Sbjct: 44  IEKLKKVVRSLEEINRNSTMASLTYKLYRFILEKEDEAAAELN-----AVDTDSIETKLV 98

Query: 101 YASSKDRFKRELDGIQIELQA 121
              +K R+ RE++   I++++
Sbjct: 99  KLENKQRYIREVEDNPIDIRS 119


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,950,070
Number of Sequences: 26719
Number of extensions: 115163
Number of successful extensions: 294
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 265
Number of HSP's gapped (non-prelim): 23
length of query: 137
length of database: 11,318,596
effective HSP length: 89
effective length of query: 48
effective length of database: 8,940,605
effective search space: 429149040
effective search space used: 429149040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)


Lotus: description of TM0066.6