BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0065.18
(799 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g37110 685 0.0
At2g13930 putative retroelement pol polyprotein 684 0.0
At2g21460 putative retroelement pol polyprotein 679 0.0
At5g35820 copia-like retrotransposable element 679 0.0
At3g45520 copia-like polyprotein 676 0.0
At2g07550 putative retroelement pol polyprotein 666 0.0
At4g21360 putative transposable element 632 0.0
At2g19840 copia-like retroelement pol polyprotein 591 e-169
At4g10460 putative retrotransposon 578 e-165
At3g61330 copia-type polyprotein 558 e-159
At1g48710 hypothetical protein 558 e-159
At1g58140 hypothetical protein 558 e-159
At4g03810 putative retrotransposon protein 554 e-158
At3g60170 putative protein 517 e-147
At3g25450 hypothetical protein 511 e-145
At2g05390 putative retroelement pol polyprotein 485 e-137
At2g15650 putative retroelement pol polyprotein 483 e-136
At2g20460 putative retroelement pol polyprotein 468 e-132
At2g16000 putative retroelement pol polyprotein 451 e-127
At1g70010 hypothetical protein 436 e-122
>At1g37110
Length = 1356
Score = 685 bits (1767), Expect = 0.0
Identities = 361/805 (44%), Positives = 525/805 (64%), Gaps = 37/805 (4%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
WK+ VENQ K+K L++DNG E+ + F +C E+GI +T TP+QNGVAERMNRT
Sbjct: 548 WKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRTCTYTPQQNGVAERMNRT 607
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ E+ RC+ +SG+ ++FW +A TAAYLINR P+ +++ +PEE+W ++ HL+ F
Sbjct: 608 IMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVPEEMWLNRKPGYKHLRKF 667
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
G ++YV D + KL P+A+K FF+GY GY+ W + +K + SRNV F ESV+Y+
Sbjct: 668 GSIAYVHQD---QGKLKPRALKGFFLGYPAGTKGYKVWLLEEEKCVISRNVVFQESVVYR 724
Query: 182 DRSSAESMSSSKQLKLSERVALE-----EISESDVVKRNQINPE-------NEDDEVEVE 229
D E + + K + +E E S S V + Q + E + D E EVE
Sbjct: 725 DLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDSEPITEGEQSSDSEEEVE 784
Query: 230 L-EQEPTTVIETPITQVR----RSTRTPKAPQRYSP--SLNYLLLTDAG----EPEYFGE 278
E+ T T +T + R R P R++ S+ + L+ EP+ + E
Sbjct: 785 YSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVTFALVVVENCIVQEPQSYQE 844
Query: 279 AMQGNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSR--RYK 336
AM+ D KW++A DEM SL KNGTW L P+ +K + RW+++LK G R+K
Sbjct: 845 AMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFK 904
Query: 337 ARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEE 396
ARLV KG+ Q++G+D+ EIF+PVVK +IR+++S+V ++L LEQ+DVK FLHGDLEEE
Sbjct: 905 ARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEE 964
Query: 397 IYMTQPEGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVK 456
+YM QPEGF ++N VC+L KSLYGLKQ+PRQW K+F+ FMS+ F R + D C +VK
Sbjct: 965 LYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVK 1024
Query: 457 KFAD-SYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSE 515
++ +I L LYVDDMLIAG++ EINR+K+Q+S FEMKD+G A +ILG+ I R+R
Sbjct: 1025 HVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKG 1084
Query: 516 GVLKLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMST--VPYAS 573
GVLKLSQE Y+ K+LDRFN+ A + P+G H K + + EE+ + T VPY+S
Sbjct: 1085 GVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVR-----EEDECVDTDVVPYSS 1139
Query: 574 AVGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCF-RRNN 632
AVGS+MYAM+ TRPD+A+A+ ++SR+MS PG HWE VKW++RYLKG+ + L F + +
Sbjct: 1140 AVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKD 1199
Query: 633 LTLQEFSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAK 692
T+ + D++ D D +S +GY+FT+GG VSWK+ LQ VA+STTE+EY+A++EAAK
Sbjct: 1200 FTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAK 1259
Query: 693 EMIWLKSFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEEL 752
E +W+K L+++G +QD ++ DSQS I L+KN V+H R KHI +++++IR+++ ++
Sbjct: 1260 EAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDV 1319
Query: 753 SLLKILGSENPTDMLTKTVTADNLR 777
+LKI S NP D LTK + + +
Sbjct: 1320 DVLKIHTSRNPVDALTKCIPVNKFK 1344
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 684 bits (1765), Expect = 0.0
Identities = 370/797 (46%), Positives = 507/797 (63%), Gaps = 30/797 (3%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
WK VENQ+ K+K L++DNG EY + F+KFC E GI KT TP+QNG+AER+NRT
Sbjct: 525 WKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNGIAERLNRT 584
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ ++ R M +SG+ K FW +A +TA YLINR PS +++ LPEE W+G LS L+ F
Sbjct: 585 IMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGALPDLSSLRKF 644
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GC++Y+ D + KL+P++ K F Y + GY+ W ++KK + SRNV F E V++K
Sbjct: 645 GCLAYIHAD---QGKLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRNVIFREQVMFK 701
Query: 182 D----RSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPE-----------NEDDEV 226
D + S S + L+++ + +E ++ ++ NP +
Sbjct: 702 DLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHNPVLNSPTHSQ 761
Query: 227 EVELEQEPTTVIETPITQ--VR-RSTRTPKAPQRYSPS----LNYLLLTDAG-EPEYFGE 278
+ E E+E + +E T VR R RT KA +Y+ S Y D EP+ + E
Sbjct: 762 DEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYSEDDGKPEPKSYQE 821
Query: 279 AMQGNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDG--SRRYK 336
A+ D KW AMK+EM S+ KN TW L PE K + RWV+ K G + R+
Sbjct: 822 ALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKLIGCRWVFTRKAGIPGVEAPRFI 881
Query: 337 ARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEE 396
ARLV KGF QK+G+D+ EIFSPVVK +IR +LS+V N+ L+Q+DVK AFLHG LEEE
Sbjct: 882 ARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEE 941
Query: 397 IYMTQPEGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVK 456
IYM QPEGFE+ N VC L +SLYGLKQ+PRQW +F+EFM + R D C + K
Sbjct: 942 IYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLRFDEFMRGIKYTRSAYDSCVYFK 1001
Query: 457 KF-ADSYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSE 515
K D+YI L LYVDDMLIA +N +E+N LKQ +S FEMKDLG AK+ILGM ISR+R
Sbjct: 1002 KCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREFEMKDLGDAKKILGMEISRDRDA 1061
Query: 516 GVLKLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAV 575
G+L LSQE YV+K+L F + +A STPLG H K + +E+ M VPYA+ +
Sbjct: 1062 GLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKAATDKEYEEQFERMKIVPYANTI 1121
Query: 576 GSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRR-NNLT 634
GS+MY+M+ TRPD+A+++GV+SRFMS P K+HW+ VKW+LRY++G+ + LCFR+ +
Sbjct: 1122 GSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMRGTEKKKLCFRKQEDFL 1181
Query: 635 LQEFSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEM 694
L+ + D+D G + D +S TGY+FT+GG +SWKSKLQ VA+S+TE+EY+A++EA KE
Sbjct: 1182 LRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEA 1241
Query: 695 IWLKSFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSL 754
+WLK F ELG QD + SDSQS I LAKN V H R KHI ++ HFIR++I + +
Sbjct: 1242 LWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKV 1301
Query: 755 LKILGSENPTDMLTKTV 771
+KI NP ++ TKTV
Sbjct: 1302 VKIATECNPANIFTKTV 1318
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 679 bits (1752), Expect = 0.0
Identities = 361/803 (44%), Positives = 520/803 (63%), Gaps = 28/803 (3%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
W VENQT +IK+L++DNG E+ ++ F +FCS+ GI +T TP+QNGVAERMNRT
Sbjct: 527 WANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAERMNRT 586
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
L E+ R M SGLPK FW +A +T A LIN+ PS L+Y++P++ WSGK S+L+ F
Sbjct: 587 LMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSPIYSYLRRF 646
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GC+++V D KL+P+A K +GY + GY+ W + KK + SRNV F E+ YK
Sbjct: 647 GCIAFVHTDDG---KLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQENASYK 703
Query: 182 DRSSAESM---------SSSKQLKLSERVALEEISESDVVK-RNQINPENEDDEVEVELE 231
D ++ SS L L + + +V+ ++ NP + E
Sbjct: 704 DMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEAQSPFNPSPATTQTYSEGV 763
Query: 232 QEPTTVIETPITQ--VR-RSTRTPKAPQRYSPSLNYLL-----LTDAGE--PEYFGEAMQ 281
T +I++P++ VR R RT +AP R+ +YL D+GE P + EA +
Sbjct: 764 NSETDIIQSPLSYQLVRDRDRRTIRAPVRFDDE-DYLAEALYTTEDSGEIEPADYSEAKR 822
Query: 282 GNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSR--RYKARL 339
+ KW+LAM +EM S KN TW++ K P+ +K + +RW+Y+ K G R+KARL
Sbjct: 823 SMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFKARL 882
Query: 340 VVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYM 399
V KG+ Q++GID+ EIF+PVVK +IR+++SIVA E+L LEQLDVK AFLHG+L+E+IYM
Sbjct: 883 VAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTAFLHGELKEKIYM 942
Query: 400 TQPEGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFA 459
PEG+E + ++ VC L+KSLYGLKQAP+QW +KFN +MS GF R D C ++K+ +
Sbjct: 943 VPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLYDSCAYIKELS 1002
Query: 460 D-SYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVL 518
D S + L LYVDDML+A N +I++LK+++S+ F+MKDLG AK+ILGM I RNR E L
Sbjct: 1003 DGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILGMEIIRNREENTL 1062
Query: 519 KLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSL 578
LSQ Y+ K+L+ +N+ ++ TPLG HLK + +++E YM ++PY+SAVGS+
Sbjct: 1063 WLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQEQDEDYMKSIPYSSAVGSI 1122
Query: 579 MYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRR-NNLTLQE 637
MYAM+ TRPD+A+ VG++SR+MS P +EHW VKW+LRY+KGS L ++R ++ +
Sbjct: 1123 MYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKGSLGTKLQYKRSSDFKVVG 1182
Query: 638 FSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWL 697
+ DAD D +S TG +FTLGG+ +SWKS Q VALSTTE+EY++++EA KE +W+
Sbjct: 1183 YCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYMSLTEAVKEAVWM 1242
Query: 698 KSFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKI 757
K LKE G EQ +F DSQS I L+KN V H R KHI ++Y +IR++I++ + ++KI
Sbjct: 1243 KGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVRYQYIRDIIANGDGDVVKI 1302
Query: 758 LGSENPTDMLTKTVTADNLRLCI 780
+NP D+ TK V + + +
Sbjct: 1303 DTEKNPADIFTKIVPVNKFQAAL 1325
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 679 bits (1751), Expect = 0.0
Identities = 355/799 (44%), Positives = 505/799 (62%), Gaps = 26/799 (3%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
WKT++ENQ K+K L +DNG E+ +QEF FC + G+ +T TP+QNGVAERMNRT
Sbjct: 536 WKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAYTPQQNGVAERMNRT 595
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ + RCM +SGL K FW +A +TA +LIN+ PS +++ +PEE W+G LK F
Sbjct: 596 IMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWTGHPPDYKILKKF 655
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
G V+Y+ D + KL+P+A K F+GY + ++ W +++K + SR++ F E+ +YK
Sbjct: 656 GSVAYIHSD---QGKLNPRAKKGIFLGYPDGVKRFKVWLLEDRKCVVSRDIVFQENQMYK 712
Query: 182 DRSSAESMSSSKQLKLSER--VALEEISESDVVKRNQINPENEDD---------EVEVEL 230
+ + KQL ER + L+ +S D + + N++ + +VE
Sbjct: 713 ELQKNDMSEEDKQLTEVERTLIELKNLSADDENQSEGGDNSNQEQASTTRSASKDKQVEE 772
Query: 231 EQEPTTVIETPITQVRRSTRTPKAPQRYSPSLNYLL-----LTDAGE---PEYFGEAMQG 282
+E + R R +APQR+ + L+ +T+ GE PE + EAM+
Sbjct: 773 TDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTEDGEVYEPETYEEAMRS 832
Query: 283 NDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSR--RYKARLV 340
+ KW+ A +EM S++KN TW + PEGK+ + +W+++ K G RYKARLV
Sbjct: 833 PECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKAGIPGVEPPRYKARLV 892
Query: 341 VKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMT 400
KGF Q++GID+ EIFSPVVK +IR +LSIV ++ LEQLDVK AFLHG+L+E I M+
Sbjct: 893 AKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVKTAFLHGNLDEYILMS 952
Query: 401 QPEGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFAD 460
QPEG+E + VC L KSLYGLKQ+PRQW ++F+ FM NSG+ R + C + ++ D
Sbjct: 953 QPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQRSKYNPCVYTQQLND 1012
Query: 461 -SYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLK 519
SYI L LYVDDMLIA N +I +LK+ ++ FEMKDLGPA++ILGM I+RNR +G+L
Sbjct: 1013 GSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGPARKILGMEITRNREQGILD 1072
Query: 520 LSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLM 579
LSQ +YV +L F + + TPLG H K + YM VPY +A+GS+M
Sbjct: 1073 LSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAANEKTLARDAEYMKLVPYPNAIGSIM 1132
Query: 580 YAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRRNN-LTLQEF 638
Y+M+ +RPD+A+ VGVVSRFMS P KEHW+ VKW++RY+KG+ CL F++++ ++ +
Sbjct: 1133 YSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKGTQDTCLRFKKDDKFEIRGY 1192
Query: 639 SDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLK 698
D+D D D +S TG++FT GG +SWKS LQ VALSTTE+EY+A++EA KE IWL+
Sbjct: 1193 CDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRVVALSTTEAEYMALAEAVKEAIWLR 1252
Query: 699 SFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKIL 758
E+G EQD + DSQS I L+KN V H R KHI ++YHFIRE I+D E+ ++KI
Sbjct: 1253 GLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHIDVRYHFIREKIADGEIQVVKIS 1312
Query: 759 GSENPTDMLTKTVTADNLR 777
+ NP D+ TKTV L+
Sbjct: 1313 TTWNPADIFTKTVPVSKLQ 1331
>At3g45520 copia-like polyprotein
Length = 1363
Score = 676 bits (1744), Expect = 0.0
Identities = 367/803 (45%), Positives = 508/803 (62%), Gaps = 27/803 (3%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
W + VENQ+ ++K+L++DNG E+ ++ F FC E G + +T TP+QNGV ERMNRT
Sbjct: 556 WISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRT 615
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ E+ R M SGLPK FW +A +TA LIN+ P ++++ P++ WSGK S+L+ +
Sbjct: 616 IMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFPDKRWSGKAPIYSYLRRY 675
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GCV++V D KL+ +A K IGY + GY+ W + KK + SRNV+F E+ +YK
Sbjct: 676 GCVTFVHTDGG---KLNLRAKKGVLIGYPSGVKGYKVWLIEEKKCVVSRNVSFQENAVYK 732
Query: 182 D-RSSAESMSSSKQLKLSERVALEEISESD-----VVKRNQINPENEDDEVEVELEQEPT 235
D E +S + + L+ ++ D + Q+ P E
Sbjct: 733 DLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQSQAQVTPATRGAVTSTPPRYETD 792
Query: 236 TVIETPITQ-------VR-RSTRTPKAPQRYSPSLNYL--LLT----DAGEPEYFGEAMQ 281
+ ET + Q VR R R +AP+R+ Y L T DA EP + EA++
Sbjct: 793 DIEETDVHQSPLSYHLVRDRERREIRAPRRFDDEDYYAEALYTTEDGDAVEPADYKEAVR 852
Query: 282 GNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSR--RYKARL 339
+ KW LAM +E+ S KN TW+ PE ++ + +RW+Y+ K+ G R+KARL
Sbjct: 853 DENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIGSRWIYKYKQGIPGVEEPRFKARL 912
Query: 340 VVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYM 399
V KG+ Q++G+D+ EIF+PVVK +IR++LSIVA ENL LEQLDVK AFLHG+L+E+IYM
Sbjct: 913 VAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENLELEQLDVKTAFLHGELKEKIYM 972
Query: 400 TQPEGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFA 459
PEG E L +N VC L+KSLYGLKQAPRQW +KFN +M+ GF R D D C + KK +
Sbjct: 973 MPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFNHYMTEIGFKRSDYDSCAYTKKLS 1032
Query: 460 D-SYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVL 518
D S + L YVDDML+A +NM I+ LK+++S FEMKDLG AK+ILG+ I +R GVL
Sbjct: 1033 DDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEMKDLGAAKKILGIEIIIDREAGVL 1092
Query: 519 KLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSL 578
LSQE Y+ K+L FN+ ++ TPLG HLK + EE YM++VPY+SAVGS+
Sbjct: 1093 WLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSATEEKLSTEEEYMNSVPYSSAVGSI 1152
Query: 579 MYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRRN-NLTLQE 637
MYAM+ TRPD+A+ VGVVSRFMS P KEHW VKW+LRY+KG+ LC++RN + ++
Sbjct: 1153 MYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVLRYIKGTVDTRLCYKRNSDFSICG 1212
Query: 638 FSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWL 697
+ DAD D D +S TG +FTLGG +SWKS LQ VA S+TE EY++++EA KE IWL
Sbjct: 1213 YCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEAIWL 1272
Query: 698 KSFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKI 757
K LK+ G EQ +F DSQS I L+KN V H R KHI +K+HFIRE+I+D ++ + KI
Sbjct: 1273 KGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKI 1332
Query: 758 LGSENPTDMLTKTVTADNLRLCI 780
+NP D+ TK + + + +
Sbjct: 1333 STEKNPADIFTKVLPVNKFQTAL 1355
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 666 bits (1719), Expect = 0.0
Identities = 361/803 (44%), Positives = 506/803 (62%), Gaps = 27/803 (3%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
W VENQT ++K+L++DNG E+ ++ F FC GI +T TP+QNGVAERMNRT
Sbjct: 549 WVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNGVAERMNRT 608
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ E+ R M SGLPK FW +A +T LIN+ PS L++++P++ WSG S+L+ +
Sbjct: 609 IMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWSGNPPVYSYLRRY 668
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GCV++V D KL+P+A K IGY + GY+ W +K + SRN+ F E+ +YK
Sbjct: 669 GCVAFVHTDDG---KLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVSRNIIFQENAVYK 725
Query: 182 D-RSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTT---- 236
D E++S+ + + + + +E DV+ N E + PTT
Sbjct: 726 DLMQRQENVSTEEDDQTGSYLEFDLEAERDVISGGDQEMVNTIPAPESPVVSTPTTQDTN 785
Query: 237 ------VIETPITQ--VR-RSTRTPKAPQRYSPSLNY---LLLTDAGE---PEYFGEAMQ 281
V ++P++ VR R R +AP+R+ Y L T+ GE PE + +A
Sbjct: 786 DDEDSDVNQSPLSYHLVRDRDKREIRAPRRFDDEDYYAEALYTTEDGEAVEPENYRKAKL 845
Query: 282 GNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSR--RYKARL 339
+ KW+LAM +E+ S +KN TW++ PE ++ + RW+++ K G R+KARL
Sbjct: 846 DANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKLGILGVEEPRFKARL 905
Query: 340 VVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYM 399
V KG+ QK+GID+ EIF+PVVK +IRV+LSIVA E+L LEQLDVK AFLHG+L+E+IYM
Sbjct: 906 VAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVKTAFLHGELKEKIYM 965
Query: 400 TQPEGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFA 459
+ PEG+E + N VC L+K+LYGLKQAP+QW +KF+ FM F + D C + K
Sbjct: 966 SPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMKEICFVKSAYDSCAYTKVLP 1025
Query: 460 D-SYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVL 518
D S + L +YVDD+L+A N I LK + FEMKDLG AK+ILGM I R+R+ GVL
Sbjct: 1026 DGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKDLGAAKKILGMEIIRDRTLGVL 1085
Query: 519 KLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSL 578
LSQE Y+ K+L+ +N+ +A TPLG H KF + +E +M +VPY+SAVGS+
Sbjct: 1086 WLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQAATEQKLIRDEDFMKSVPYSSAVGSI 1145
Query: 579 MYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRR-NNLTLQE 637
MYAM+ TRPD+A+ VG++SRFMS P KEHW VKW+LRY+KG+ + LC+++ ++ ++
Sbjct: 1146 MYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVLRYIKGTLKTRLCYKKSSSFSIVG 1205
Query: 638 FSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWL 697
+ DAD D D +S TG +FTLGG +SWKS LQ VA STTESEY++++EA KE IWL
Sbjct: 1206 YCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWL 1265
Query: 698 KSFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKI 757
K LK+ G EQ +F DSQS I L+KN V H R KHI +KYHFIRE+ISD + +LKI
Sbjct: 1266 KGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVKYHFIREIISDGTVEVLKI 1325
Query: 758 LGSENPTDMLTKTVTADNLRLCI 780
+NP D+ TK + + +
Sbjct: 1326 STEKNPADIFTKVLAVSKFQAAL 1348
>At4g21360 putative transposable element
Length = 1308
Score = 632 bits (1631), Expect = 0.0
Identities = 337/788 (42%), Positives = 493/788 (61%), Gaps = 52/788 (6%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
WK VENQ K+K L++DNG E+ + +F +FC +NGI +T TP+QNGVA+RMNRT
Sbjct: 539 WKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTPQQNGVAKRMNRT 598
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
L E+ RC+ +SGL ++FW +A TAAYL+NR P+ +D+ +PEE+W K+ HL+ F
Sbjct: 599 LMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWLDKKPGYKHLRRF 658
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GC++YV +D + KL P+A+K F+GY GY+ W +K + SRN+ FNE+ +YK
Sbjct: 659 GCIAYVHLD---QGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCVISRNIVFNENQVYK 715
Query: 182 D--RSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVE--LEQEPTTV 237
D SS +S+ L+ + + K + E D E + E + QEP
Sbjct: 716 DIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTGGVTIEEIDQESDSENSVTQEPLIA 775
Query: 238 ---IETPITQVRRSTRTPKAPQRYSPSLNYLLLT------DAGEPEYFGEAMQGNDSIKW 288
+ + R R P PQ+ + ++ L ++ EP+ + +A + IKW
Sbjct: 776 SIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIESEEPQCYHDAKKDKHWIKW 835
Query: 289 ELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDG--SRRYKARLVVKGFQQ 346
MK+E+ SL KNGTW + + P+ +K + RW+++LK G ++RYKARLV +GF Q
Sbjct: 836 NGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGIPGVEAQRYKARLVARGFTQ 895
Query: 347 KQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFE 406
++GID+ E+F+PVVK +IR+++S V +++ LEQ+DVK FLHG+L++ +YM QPEGFE
Sbjct: 896 QKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTTFLHGELDQVLYMEQPEGFE 955
Query: 407 VLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKF-ADSYIIL 465
V K+ VC L KSLYGLKQAPRQW KKF+ FM + F R + D C +VK+ ++ L
Sbjct: 956 VNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSLQFARSEHDSCVYVKEVNPGEFVYL 1015
Query: 466 ALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKY 525
LYVDDML+A + +EI++LK+ +S FEMKD+G A +ILG+ I RNR EG L+LSQ +Y
Sbjct: 1016 LLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMGAASRILGIDIIRNRKEGTLRLSQTRY 1075
Query: 526 VEKLLDRFNVGDANTRSTPLGNHLKFSK--KQSPQTDEEESYMSTVPYASAVGSLMYAMV 583
V+K++ RF + DA STP+G H K + + D E VPY+SAVGS+MYAM+
Sbjct: 1076 VDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIGSVDPE-----VVPYSSAVGSVMYAMI 1130
Query: 584 CTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRRNNLTLQEFSDADL 643
T PD+A+A+G+VSRFMS PG NL +Q + D+D
Sbjct: 1131 GTIPDVAYAMGLVSRFMSRPGA--------------------------NLEVQGYCDSDH 1164
Query: 644 GGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKE 703
D D +S +GY+FT+GG VSWKS LQ+ VALS+T++E++A++EA KE IW++ L++
Sbjct: 1165 AADLDKRRSISGYVFTVGGNTVSWKSSLQHVVALSSTQAEFIALTEAVKEAIWIRGLLED 1224
Query: 704 LGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENP 763
+G + ++ DSQS I L+KN FH R KH+++K++FIR++I E+ + KI S NP
Sbjct: 1225 MGLQPKPATVWCDSQSAICLSKNNAFHDRTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNP 1284
Query: 764 TDMLTKTV 771
DMLTK +
Sbjct: 1285 ADMLTKCI 1292
>At2g19840 copia-like retroelement pol polyprotein
Length = 1137
Score = 591 bits (1524), Expect = e-169
Identities = 330/797 (41%), Positives = 467/797 (58%), Gaps = 46/797 (5%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
WK VE Q+ K+K L++DNG E+ + +F + C + GI +T TP+QNGVAER+NRT
Sbjct: 343 WKKMVETQSERKLKHLRTDNGLEFCNHKFDEVCKKEGIVRHRTCTYTPQQNGVAERLNRT 402
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ + R M +SGL K FW A +TA YLINR PS ++ ++PEE+W+ + S LK F
Sbjct: 403 IMNKVRSMLSESGLDKKFWAKAASTAVYLINRSPSSSIENKIPEELWTSAVPNFSGLKRF 462
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GCV YV + KLDP+A K F+GY + G+R W + ++ SRNV F E V+YK
Sbjct: 463 GCVVYVY---SQEGKLDPRAKKGVFVGYPNGVKGFRVWMIEEERCSISRNVVFREDVMYK 519
Query: 182 DRSSAESMSSSKQLKLS-ERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTV--- 237
D + + S L+ R+ E + + + DD+ + E+ P +
Sbjct: 520 DILNQSTSGMSFDFPLATNRIPSFECAGNRKEDEISVQGGVSDDDTKQSSEESPISTGSS 579
Query: 238 --------IETPITQVRRSTRTPKAPQRYS---------PSLNYLLLTDAGEPEY--FGE 278
+ + +R T+ P + Y Y++ D G PE + +
Sbjct: 580 GQNSGQRTYQIARDKPKRQTKIPDKLRDYELNEEVLDEIAGYAYMITEDGGNPEPNDYQK 639
Query: 279 AMQGNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSR--RYK 336
A+Q +D W A+ +E+ SL KN TW L + +K + +WV++ K G R+K
Sbjct: 640 ALQDSDYKMWLKAVDEEIESLLKNNTWVLVNRDQFQKPIGCKWVFKRKSGIVGVEKPRFK 699
Query: 337 ARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEE 396
ARLVVKG+ QK+GID+ EIFSPVVK +IR++LS+V ++ L+Q+DVK AFLHG L+E
Sbjct: 700 ARLVVKGYSQKEGIDYQEIFSPVVKHVSIRLLLSMVTHCDMELQQMDVKTAFLHGYLDET 759
Query: 397 IYMTQPEGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVK 456
IY+ QPEG+ + VC L +SLYGL+Q+PRQW +FNEFM G+ R D C + K
Sbjct: 760 IYIEQPEGYVHKRYPDKVCLLKRSLYGLRQSPRQWNNRFNEFMQKIGYERSKYDSCVYFK 819
Query: 457 KF-ADSYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSE 515
+ + YI L LYVDD+LIA + + LK ++ FEMKDLG AK+ILGM I R+R
Sbjct: 820 ELQSGEYIYLLLYVDDILIASRDKRTVCDLKALLNSEFEMKDLGDAKKILGMEIVRDRKA 879
Query: 516 GVLKLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAV 575
G + +SQE Y+ K+L F + A TP+G H K + + M VPY SAV
Sbjct: 880 GTMSISQEGYLLKVLGNFGMDQAKPVFTPMGAHFKLKPATDEEVMRQSEVMRAVPYQSAV 939
Query: 576 GSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFR-RNNLT 634
GSLMY+M+ TRPD+AH+VG+V RFMS P KEHW+ VKWILRY++GS LC++ L
Sbjct: 940 GSLMYSMIGTRPDLAHSVGLVCRFMSKPLKEHWQAVKWILRYIRGSIDRKLCYKNEGELI 999
Query: 635 LQEFSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEM 694
L+ + D+D D +G +ST+G VALS+TE+EY+A+++ AKE
Sbjct: 1000 LEGYCDSDYAADKEGRRSTSGV----------------KVVALSSTEAEYMALTDGAKEA 1043
Query: 695 IWLKSFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSL 754
IWLK + ELG Q + DSQS I LAKN V+H R KHI +KYHFIR+L+++ E+ +
Sbjct: 1044 IWLKGHVSELGFVQKTVNIHCDSQSAIALAKNAVYHERTKHIDVKYHFIRDLVNNGEVQV 1103
Query: 755 LKILGSENPTDMLTKTV 771
LKI +NP D+ TK +
Sbjct: 1104 LKIDTEDNPADIFTKVL 1120
>At4g10460 putative retrotransposon
Length = 1230
Score = 578 bits (1489), Expect = e-165
Identities = 327/784 (41%), Positives = 462/784 (58%), Gaps = 95/784 (12%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
W VENQT KIK L+ DNG E+ +Q+F FC E GI +T TP+QNGVAERMN T
Sbjct: 533 WSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRHQTCAYTPQQNGVAERMNHT 592
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ E+ R M SGLPK FW +A NT LIN+ PS +++++ ++ WSGK ++LK F
Sbjct: 593 IMEKVRRMLSYSGLPKTFWAEATNTVVTLINKTPSSAVNFEISDKRWSGKSPVYNYLKRF 652
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GCV++ D KL P+A K F+GY GY+ W + +K SRNVTF E+ +Y+
Sbjct: 653 GCVAFTYADEG---KLVPRAKKGVFLGYLSGEKGYKVWLLEERKCSVSRNVTFQENAVYR 709
Query: 182 DRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIETP 241
D V+++N+ + +EV+
Sbjct: 710 D----------------------------VMQKNK-----DSEEVDTS------------ 724
Query: 242 ITQVRRSTRTPKAPQRYSPSLNYLLLTDAGEPEYFGEAMQGNDSIKWELAMKDEMTSLQK 301
++VRR R PK R+ Y TD E + EA+ M SL K
Sbjct: 725 -SRVRREIRAPK---RFDVEGYYSEFTDDEEESFNVEAL---------------MDSLLK 765
Query: 302 NGTWSLTKLPEGKKALQNRWVYRLKEESDGSR--RYKARLVVKGFQQKQGIDFTEIFSPV 359
N TW++ K P G++ + +W+++ K + G R+KARLV KG+ Q++GID+T+IFSPV
Sbjct: 766 NHTWTVVKKPVGERVIGCKWIFKRKPGTPGIEQPRFKARLVSKGYAQREGIDYTDIFSPV 825
Query: 360 VKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFEVLGTKNLVCKLHK 419
VK +IR++L+IVA EN LEQLDVK AFLHGDLEE+I+M PEG+E + VC L+K
Sbjct: 826 VKHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQFKQGEVCLLNK 885
Query: 420 SLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFAD-SYIILALYVDDMLIAGSN 478
++YGLKQ+PR+W +KF+ +M GF R + C ++K D S + L +YVDDML+A +
Sbjct: 886 TMYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDGSKVYLLIYVDDMLVAARD 945
Query: 479 MTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKYVEKLLDRFNVGDA 538
M I+ LKQ++SE FEMKDLG AK+ILGM ISR+R +G L LSQE Y+ K+L+ +NV
Sbjct: 946 MQVISELKQKLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQEDYLSKVLETYNVDQC 1005
Query: 539 NTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCTRPDIAHAVGVVSR 598
TPLG HLK Q +E YM +VPY++AVGS+MY+M+ TRPD+A+ VG++SR
Sbjct: 1006 KFVVTPLGAHLKMHAATEQQLLSDEEYMKSVPYSNAVGSIMYSMIDTRPDLAYCVGIISR 1065
Query: 599 FMSNPGKEHWECVKWILRYLKGSSRMCLCFRRNNLTLQEFSDADLGGDSDGGKSTTGYIF 658
FMS P KG+ +LTL+ + D+D + + +S +G +F
Sbjct: 1066 FMSKP---------------KGA----------DLTLRGYCDSDYAANLENRRSISGMVF 1100
Query: 659 TLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKELGKEQDVPPLFSDSQ 718
TLGG+ ++ +S LQ V +S+T++ Y++++EA KE IWLK L++ G EQ +F DSQ
Sbjct: 1101 TLGGSTINLRSCLQKVVVMSSTKAGYMSLTEAVKEAIWLKGLLQDFGYEQKTVEIFCDSQ 1160
Query: 719 SVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENPTDMLTKTVTADNLRL 778
S I L+KN V H R KHI +KYH IRE+I+D + + KI N D+ TK V +
Sbjct: 1161 SAIALSKNNVHHDRTKHIDIKYHKIREVIADGVVEVKKICTLVNSADIFTKVVPVSKFKT 1220
Query: 779 CIAS 782
+ S
Sbjct: 1221 ALHS 1224
>At3g61330 copia-type polyprotein
Length = 1352
Score = 558 bits (1439), Expect = e-159
Identities = 314/809 (38%), Positives = 466/809 (56%), Gaps = 61/809 (7%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
+K VE ++ L IK+++SD GGE+ S+EF K+C +NGIR T+ +P+QNGV ER NRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRT 637
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ E AR M LPK W +A+ A YL+NR P+ + + P+E WSG++ +SHL+VF
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
G +++ + ++R KLD K+ K FIGY + GY+ ++ KK I SRN+ F+E +
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 182 DRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIETP 241
S+ E + P E+DE E E+ P+ TP
Sbjct: 758 WNSNEEDYN--------------------------FFPHFEEDEPEPTREEPPSEEPTTP 791
Query: 242 IT-----QVRRST--RTPKAPQ--------RYSPSLNYLLLTDAGEPEYFGEAMQGNDSI 286
T Q+ S+ RTP+ +L L EP F +A++
Sbjct: 792 PTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQKAIEKKT-- 849
Query: 287 KWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKARLVVKGFQ 345
W AM +E+ S+QKN TW LT LP G KA+ +WVY+ K+ S G RYKARLV KG+
Sbjct: 850 -WRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYS 908
Query: 346 QKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGF 405
Q+ GID+ E+F+PV ++ T+R+I+S+ A + Q+DVK AFL+GDLEEE+Y+ QP+G+
Sbjct: 909 QRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 968
Query: 406 EVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIIL 465
V G ++ V +L K LYGLKQAPR W + +++ F +C +H ++K + +I
Sbjct: 969 IVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIA 1028
Query: 466 ALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKY 525
LYVDD++ G+N + K++M++ FEM D+G LG+ + + G+ ++QE Y
Sbjct: 1029 CLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEV-KQEDNGIF-ITQEGY 1086
Query: 526 VEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCT 585
+++L +F + D+N TP+ +K SKK EE + + S VGSL Y + CT
Sbjct: 1087 AKEVLKKFKIDDSNPVCTPMECGIKLSKK------EEGEGVDPTTFKSLVGSLRY-LTCT 1139
Query: 586 RPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCF-RRNNLTLQEFSDADLG 644
RPDI +AVGVVSR+M +P H++ K ILRY+KG+ L + ++ L +SD+D G
Sbjct: 1140 RPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWG 1199
Query: 645 GDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKEL 704
GD D KST+G++F +G TA +W SK Q V LST E+EYVA + IWL++ LKEL
Sbjct: 1200 GDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKEL 1259
Query: 705 GKEQDVP-PLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENP 763
Q+ P +F D++S I LAKNPVFH R KHI +YH+IRE +S +++ L + +
Sbjct: 1260 SLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQV 1319
Query: 764 TDMLTKTVTADNL-----RLCIASAGLRG 787
D TK + +N L +A + LRG
Sbjct: 1320 ADFFTKPLKRENFIKMRSLLGVAKSSLRG 1348
>At1g48710 hypothetical protein
Length = 1352
Score = 558 bits (1439), Expect = e-159
Identities = 314/809 (38%), Positives = 468/809 (57%), Gaps = 61/809 (7%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
+K VE ++ L IK+++SD GGE+ S+EF K+C +NGIR T+ +P+QNGVAER NRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ E AR M LPK W +A+ A YL+NR P+ + + P+E WSG++ +SHL+VF
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVF 697
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
G +++ + ++R KLD K+ K FIGY + GY+ ++ KK I SRN+ F+E +
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 182 DRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIETP 241
S+ E + P E+DE E E+ P+ TP
Sbjct: 758 WNSNEEDYN--------------------------FFPHFEEDEPEPTREEPPSEEPTTP 791
Query: 242 IT-----QVRRST--RTPKAPQ--------RYSPSLNYLLLTDAGEPEYFGEAMQGNDSI 286
T Q+ S+ RTP+ +L L EP F EA++
Sbjct: 792 PTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQEAIEKKT-- 849
Query: 287 KWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKARLVVKGFQ 345
W AM +E+ S+QKN TW LT LP G K + +WVY+ K+ S G RYKARLV KG+
Sbjct: 850 -WRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAKGYI 908
Query: 346 QKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGF 405
Q+ GID+ E+F+PV ++ T+R+I+S+ A + Q+DVK AFL+GDLEEE+Y+ QP+G+
Sbjct: 909 QRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGY 968
Query: 406 EVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIIL 465
V G ++ V +L K+LYGLKQAPR W + +++ F +C +H ++K + +I
Sbjct: 969 IVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIA 1028
Query: 466 ALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKY 525
LYVDD++ G+N + K++M++ FEM D+G LG+ + + G+ ++QE Y
Sbjct: 1029 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEV-KQEDNGIF-ITQEGY 1086
Query: 526 VEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCT 585
+++L +F + D+N TP+ +K SKK EE + + S VGSL Y + CT
Sbjct: 1087 AKEVLKKFKMDDSNPVCTPMECGIKLSKK------EEGEGVDPTTFKSLVGSLRY-LTCT 1139
Query: 586 RPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCF-RRNNLTLQEFSDADLG 644
RPDI +AVGVVSR+M +P H++ K ILRY+KG+ L + ++ L +SD+D G
Sbjct: 1140 RPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWG 1199
Query: 645 GDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKEL 704
GD D KST+G++F +G TA +W SK Q V LST E+EYVA + IWL++ LKEL
Sbjct: 1200 GDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKEL 1259
Query: 705 GKEQDVP-PLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENP 763
Q+ P +F D++S I LAKNPVFH R KHI +YH+IRE +S +++ L + +
Sbjct: 1260 SLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQV 1319
Query: 764 TDMLTKTVTADNL-----RLCIASAGLRG 787
D+ TK + ++ L +A + LRG
Sbjct: 1320 ADIFTKPLKREDFIKMRSLLGVAKSSLRG 1348
>At1g58140 hypothetical protein
Length = 1320
Score = 558 bits (1438), Expect = e-159
Identities = 309/794 (38%), Positives = 464/794 (57%), Gaps = 63/794 (7%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
+K VE ++ L IK+++SD GGE+ S+EF K+C +NGIR T+ +P+QNGVAER NRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ E AR M LPK W +A+ A YL+NR P+ + + P+E WSG++ +SHL+VF
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
G +++ + ++R KLD K+ K FIGY + GY+ ++ KK I SRN+ F+E +
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 182 DRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIETP 241
S+ E + P E+D+ E E+ P+ TP
Sbjct: 758 WNSNEEDYN--------------------------FFPHFEEDKPEPTREEPPSEEPTTP 791
Query: 242 ITQVRRSTRTPKAPQRYSPSLNYLLLTDAGEPEYFGEAMQGNDSIKWELAMKDEMTSLQK 301
T +P + Q + + EP F EA++ W AM +E+ S+QK
Sbjct: 792 PT-------SPTSSQ----------IEEKCEPMDFQEAIEKKT---WRNAMDEEIKSIQK 831
Query: 302 NGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKARLVVKGFQQKQGIDFTEIFSPVV 360
N TW LT LP G KA+ +WVY+ K+ S G RYKARLV KG+ Q+ GID+ E+F+PV
Sbjct: 832 NDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVA 891
Query: 361 KMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFEVLGTKNLVCKLHKS 420
++ T+R+I+S+ A + Q+DVK AFL+GDLEEE+Y+ QP+G+ V G ++ V +L K+
Sbjct: 892 RLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKA 951
Query: 421 LYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIILALYVDDMLIAGSNMT 480
LYGLKQAPR W + +++ F +C +H ++K + +I LYVDD++ G+N +
Sbjct: 952 LYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPS 1011
Query: 481 EINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKYVEKLLDRFNVGDANT 540
K++M++ FEM D+G LG+ + + G+ ++QE Y +++L +F + D+N
Sbjct: 1012 MFEEFKKEMTKEFEMTDIGLMSYYLGIEV-KQEDNGIF-ITQEGYAKEVLKKFKMDDSNP 1069
Query: 541 RSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCTRPDIAHAVGVVSRFM 600
TP+ +K SKK EE + + S VGSL Y + CTRPDI +AVGVVSR+M
Sbjct: 1070 VCTPMECGIKLSKK------EEGEGVDPTTFKSLVGSLRY-LTCTRPDILYAVGVVSRYM 1122
Query: 601 SNPGKEHWECVKWILRYLKGSSRMCLCF-RRNNLTLQEFSDADLGGDSDGGKSTTGYIFT 659
+P H++ K ILRY+KG+ L + ++ L +SD+D GGD D KST+G++F
Sbjct: 1123 EHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFY 1182
Query: 660 LGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKELGKEQDVP-PLFSDSQ 718
+G TA +W SK Q V LST E+EYVA + IWL++ LKEL Q+ P +F D++
Sbjct: 1183 IGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNK 1242
Query: 719 SVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENPTDMLTKTVTADNL-- 776
S I LAKNPVFH R KHI +YH+IRE +S +++ L + + D+ TK + ++
Sbjct: 1243 SAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIK 1302
Query: 777 ---RLCIASAGLRG 787
L +A + LRG
Sbjct: 1303 MRSLLGVAKSSLRG 1316
>At4g03810 putative retrotransposon protein
Length = 964
Score = 554 bits (1427), Expect = e-158
Identities = 311/795 (39%), Positives = 462/795 (57%), Gaps = 35/795 (4%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
++ EV+NQ IK+L+SD GGEY SQ F E GI T GTP+ NGV+ER NRT
Sbjct: 191 FQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRT 250
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
L + R M + LP FW A+ T+A+++NR PS ++ + P E+W+GK +LS LK++
Sbjct: 251 LLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVE-KTPYEIWTGKVPNLSFLKIW 309
Query: 122 GCVSYV--LIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVL 179
GC SY LI DKL PK+ KC+F+GY + GY F+ + K+ RN F E
Sbjct: 310 GCESYAKRLIT----DKLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNGAFLEREF 365
Query: 180 YKDRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIE 239
+S +V LEE+ E + + E+ ++++ EP V
Sbjct: 366 LSKGTSGS------------KVLLEEVREP----QGDVPTSQEEHQLDLRRVVEPILVEP 409
Query: 240 TPITQVRRSTRTPKAPQRYSPSL---NYLLLTDAGEPEYFGEAMQGNDSIKWELAMKDEM 296
+VRRS R+ P R+ + + L + ++ EP + EA+ G DS KW A K EM
Sbjct: 410 ----EVRRSERSRHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEM 465
Query: 297 TSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSRR-YKARLVVKGFQQKQGIDFTEI 355
S+ +N W+L LP+G K ++ +W+++ K + DG+ + YKA LV KG++Q GID+ E
Sbjct: 466 ESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDET 525
Query: 356 FSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFEVLGTKNLVC 415
+SPV + +IR++L+ A + + Q+DVK AFL+G+LEE +YMTQPEGF V VC
Sbjct: 526 YSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVC 585
Query: 416 KLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIILALYVDDMLIA 475
KLH+S+YGLKQA R W +FNE + F R + + C + K + L LYVDD+L+
Sbjct: 586 KLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLL 645
Query: 476 GSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKYVEKLLDRFNV 535
G+++ + +K + F MKD+G A ILG+RI R+R ++ LSQ+ Y++K+L RFN+
Sbjct: 646 GNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNM 705
Query: 536 GDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCTRPDIAHAVGV 595
D+ P+ + + SK Q P T +E MS +PYASA+GS+MYAM+ TRPD+A A+ +
Sbjct: 706 HDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSM 765
Query: 596 VSRFMSNPGKEHWECVKWILRYLKGSSRMCLCF-RRNNLTLQEFSDADLGGDSDGGKSTT 654
SR+ S+PG+ HW V+ I +YL+ + L + L + ++DA D D +S +
Sbjct: 766 TSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQS 825
Query: 655 GYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKELGKEQDVP--- 711
G+ F L G AVSWKS Q+ VA STTE+EY+A SEAAKE++W++ F+ ELG +
Sbjct: 826 GFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGPI 885
Query: 712 PLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENPTDMLTKTV 771
L+ D+ I AK P H + KHIQ +YH IRE+I ++ + ++ N D TK +
Sbjct: 886 DLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPL 945
Query: 772 TADNLRLCIASAGLR 786
+ G+R
Sbjct: 946 PQPKHESHTTAIGIR 960
>At3g60170 putative protein
Length = 1339
Score = 517 bits (1332), Expect = e-147
Identities = 293/803 (36%), Positives = 452/803 (55%), Gaps = 35/803 (4%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
+K VE + + L++D GGE+ S EF +FC +GI T TP+QNGVAER NRT
Sbjct: 546 FKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRT 605
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
+ R M + +PKMFW +A + ++ NR P+ ++ PEE WSG++ + + +VF
Sbjct: 606 IMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVF 665
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GC+ YV I +R KLD K+ KC F+G + +R +D KKI+ S++V F+E +
Sbjct: 666 GCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSW- 724
Query: 182 DRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENE---DDEVEVELEQEPTTVI 238
D A+ + L+ + ++ S+VV+ + N D+ V P++
Sbjct: 725 DWDQADVEAKEVTLECGDE---DDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPA 781
Query: 239 ETPIT-QVRRSTRTPKAPQRYSP----------SLNYLLLTDAGEPEYFGEAMQGNDSIK 287
+P+ +V R R P Y S+ L++ +P F +A++ D I
Sbjct: 782 PSPVAAKVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVK--DKI- 838
Query: 288 WELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKARLVVKGFQQ 346
W AM+ E+ S+ KN TW LT LP+G + +WVY+ K DG +YKARLV KG+ Q
Sbjct: 839 WREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQ 898
Query: 347 KQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFE 406
GID+TE+F+PV ++ T+R IL+I + N + QLDVK AFLHG+L+EE+Y+ QPEGF
Sbjct: 899 CYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFI 958
Query: 407 VLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIILA 466
G + V KL K+LYGLKQAPR WY + + F RC +H F K + +I++
Sbjct: 959 REGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVS 1018
Query: 467 LYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKYV 526
LYVDD++ GS+ + K+ M FEM DLG K LG+ + +S+G + + Q +Y
Sbjct: 1019 LYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEV--KQSDGGIFICQRRYA 1076
Query: 527 EKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCTR 586
++L RF + ++N P+ K +K DE + + VGSLMY V TR
Sbjct: 1077 REVLARFGMDESNAVKNPIVPGTKLTK------DENGEKVDETMFKQLVGSLMYLTV-TR 1129
Query: 587 PDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRR---NNLTLQEFSDADL 643
PD+ + V ++SRFMSNP HW K ILRYLKG+ + + +RR +L L F+D+D
Sbjct: 1130 PDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDY 1189
Query: 644 GGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKE 703
GD + +ST+G++F + A+ W SK Q VALSTTE+EY+A + A + +WL+ L++
Sbjct: 1190 AGDLNDRRSTSGFVFLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEK 1249
Query: 704 LGKEQDVPPLFS-DSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSEN 762
LG E+ + + D+ S I L+K+PV H + KHI++++H++R+L++ + + L +
Sbjct: 1250 LGAEEKSATVINCDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQ 1309
Query: 763 PTDMLTKTVTADNLRLCIASAGL 785
D+ TK + + A G+
Sbjct: 1310 VADIFTKPLKLEQFEKLRALLGM 1332
>At3g25450 hypothetical protein
Length = 1343
Score = 511 bits (1315), Expect = e-145
Identities = 299/791 (37%), Positives = 452/791 (56%), Gaps = 38/791 (4%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
+K VE + IK+ ++D GGE+ S EF++FC++ GI T TP+QNGV ER NRT
Sbjct: 536 FKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQNGVVERRNRT 595
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
L R + +P W +A+ + YLINR + L Q P EV+ K+ ++ HL+VF
Sbjct: 596 LLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHKKPNVEHLRVF 655
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GCVSY ++ KLD ++ ++G YR D ++I SR+V F+E+ +
Sbjct: 656 GCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRDVVFDEN---R 712
Query: 182 DRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIETP 241
ES S + + + + L E + V + N I+ E E+ E E E+ E +IE
Sbjct: 713 SWMWQESSSETDKESGTFTITLSEFGNNGVTE-NDISTEPEETE-EAEINGEDENIIEEA 770
Query: 242 ITQ-----------VRRSTRTPKAPQRYSPSL-------NYLLLTDAGEPEYFGEAMQGN 283
T+ VRRS R P + +LLL EP F EA N
Sbjct: 771 ETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVNDEPWDFKEA---N 827
Query: 284 DSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKARLVVK 342
S +W A K+E+ S++KN TWSL LP G KA+ +WV++LK SDGS +YKARLV K
Sbjct: 828 KSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGSINKYKARLVAK 887
Query: 343 GFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQP 402
G+ Q+ G+DF E+F+PV ++ T+R+I+++ A+ + LDVK AFLHG+L E++Y++QP
Sbjct: 888 GYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGELREDVYVSQP 947
Query: 403 EGFEVLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSY 462
EGF +K V KLHK+LYGL+QAPR W K NE + F +C + + K+ ++
Sbjct: 948 EGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEPSLYRKQEGENI 1007
Query: 463 IILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQ 522
+++A+YVDD+L+ GSN+ I K+ M FEM DLG LG+ + +S+ + L Q
Sbjct: 1008 LVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVL--QSKDGITLKQ 1065
Query: 523 EKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAM 582
E+Y +K+L+ + NT +TP+ L+ SK Q +E + Y +G L Y +
Sbjct: 1066 ERYAKKILEEAGMSKCNTVNTPMIASLELSKAQ------DEKRIDETDYRRNIGCLRY-L 1118
Query: 583 VCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRR-NNLTLQEFSDA 641
+ TRPD+++ VG++SR++ P + H +K ILRYL+G++ L F++ N L +SD+
Sbjct: 1119 LHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIGYSDS 1178
Query: 642 DLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFL 701
D D GKST G+IF L ++W S+ Q V LS+ E+E++A +EAAK+ IWL+ L
Sbjct: 1179 SHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQELL 1238
Query: 702 KE-LGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGS 760
E +G E + + D++S I L KNPVFH R KHI +YHFIRE + + ++ + + G
Sbjct: 1239 AEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEVEHVPGV 1298
Query: 761 ENPTDMLTKTV 771
D+LTK +
Sbjct: 1299 RQKADILTKAL 1309
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 485 bits (1248), Expect = e-137
Identities = 286/780 (36%), Positives = 437/780 (55%), Gaps = 27/780 (3%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
+KT+VE ++ +KIK+ ++D GGE+ SQEF+ FC++ GI T TP+QNGV ER NRT
Sbjct: 504 FKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVVERRNRT 563
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVF 121
L R + +P W +A+ + Y+INR + L Q P EV+ ++ ++ HL+VF
Sbjct: 564 LLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNVEHLRVF 623
Query: 122 GCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYK 181
GC+ Y I+ KLD ++ ++G YR D N+KII+ N +
Sbjct: 624 GCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSDSETRDISG 683
Query: 182 DRSSAESMSSSKQLKLSERVALEEISESDVVKRNQI--NPENEDDEVEVELEQEPTTVIE 239
S + ++ S+ + E+ E + N NE ++++ E E +P+
Sbjct: 684 TFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAE-ETQPSHA-- 740
Query: 240 TPITQVRRSTRTPKAPQRYSPSL-------NYLLLTDAGEPEYFGEAMQGNDSIKWELAM 292
TP+ +RRSTR P + +LL EP F EA N +W A
Sbjct: 741 TPLPTLRRSTRQVGKPNYLDDYVLMAEIEGEQVLLAINDEPWDFKEA---NKLKEWRDAC 797
Query: 293 KDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKARLVVKGFQQKQGID 351
K+E+ S++KN TWSL LP +K + +WV+++K SDGS +YKARLV KG+ Q+ GID
Sbjct: 798 KEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHGID 857
Query: 352 FTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFEVLGTK 411
+ E+F+ V ++ TIRVI+++ A+ + LDVK AFLHG+L E++Y+TQPEGF +
Sbjct: 858 YDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNE 917
Query: 412 NLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIILALYVDD 471
V KLHK+LYGLKQAPR W K N+ + F +C + + ++ +I+A+YVDD
Sbjct: 918 GKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYVDD 977
Query: 472 MLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKYVEKLLD 531
+L+ GS++ I K+ M+ FEM DLG LG+ + +R G++ L QE+Y K+++
Sbjct: 978 LLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEV-LHRKNGII-LRQERYAMKIIE 1035
Query: 532 RFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCTRPDIAH 591
+ + N P+ L+ K Q EE ++ Y +G L Y +V TRPD+++
Sbjct: 1036 EAGMSNCNPVLIPMAAGLELCKAQ------EEKCITERDYRRMIGCLRY-IVHTRPDLSY 1088
Query: 592 AVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRRN-NLTLQEFSDADLGGDSDGG 650
VGV+SR++ P + H +K +LRYLKG+ L +R L +SD+ D D G
Sbjct: 1089 CVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSADLDDG 1148
Query: 651 KSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKEL-GKEQD 709
KST G+IF L ++W S+ Q VALS+ E+E++A +EAAK+ IWL+ E+ G +
Sbjct: 1149 KSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSE 1208
Query: 710 VPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENPTDMLTK 769
+ D++S I L KN VFH R KHI +YHFIRE + + + + + G E D+LTK
Sbjct: 1209 KVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADILTK 1268
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 483 bits (1243), Expect = e-136
Identities = 284/785 (36%), Positives = 440/785 (55%), Gaps = 35/785 (4%)
Query: 2 WKTEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRT 61
+K VE Q+ IK+L+ + FC + GI T+ +P+QNG AER NR+
Sbjct: 566 FKALVEKQSNCSIKTLRP----------MEVFCEDEGINRQVTLPYSPQQNGAAERKNRS 615
Query: 62 LNERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQL-PEEVWSGKEVSLSHLKV 120
L E AR M ++ LP W +A+ T+AYL NR PS ++ + P E W G + ++SHL++
Sbjct: 616 LVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHKPNVSHLRI 675
Query: 121 FGCVSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLY 180
FG + YV I +R KLD KA IGY GYR + +++K+ SR+V F E +
Sbjct: 676 FGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDVVFQEDKKW 735
Query: 181 KDRSSAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVEL-------EQE 233
D E + + + +++ + E+ +QI+ + E E +QE
Sbjct: 736 -DWDKQEEVKKTFVMSINDIQESRDQQETSSHDLSQIDDHANNGEGETSSHVLSQVNDQE 794
Query: 234 PTTVIETPITQVRRSTRTPKAPQRYSPSLNYLL---LTDAGEPEYFGEAMQGNDSIKWEL 290
E+P KAP+ + + L EP+ + EA + WE
Sbjct: 795 ERETSESPKKYKSMKEILEKAPRMENDEAAQGIEACLVANEEPQTYDEARGDKE---WEE 851
Query: 291 AMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGSR-RYKARLVVKGFQQKQG 349
AM +E+ ++KN TW L PE K + +W+Y++K ++ G+ ++KARLV +GF Q+ G
Sbjct: 852 AMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYG 911
Query: 350 IDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFEVLG 409
ID+ E F+PV + TIR +L+ A L Q+DVK AFL+G+LEEE+Y+TQP GF + G
Sbjct: 912 IDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEG 971
Query: 410 TKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIILALYV 469
+ V +L+K+LYGLKQAPR WY++ + + +GF R D + KK + +I++LYV
Sbjct: 972 KEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSMNDAALYSKKKGEDVLIVSLYV 1031
Query: 470 DDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKYVEKL 529
DD++I G+N IN K+ M + FEM DLG LGM + N+ + + LSQEKY KL
Sbjct: 1032 DDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGMEV--NQDDSGIFLSQEKYANKL 1089
Query: 530 LDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCTRPDI 589
+D+F + ++ + STPL K++ + D++E + Y VG L+Y + +RPD+
Sbjct: 1090 IDKFGMKESKSVSTPLTPQ---GKRKGVEGDDKE-FADPTKYRRIVGGLLY-LCASRPDV 1144
Query: 590 AHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCF-RRNNLTLQEFSDADLGGDSD 648
+A +SR+MS+P +H++ K +LRY+KG+S + F + L +SD+D GG +
Sbjct: 1145 MYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPRLVGYSDSDWGGSLE 1204
Query: 649 GGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKELG-KE 707
KSTTGY+FTLG W+S Q VA ST E+EY+A+ A + IWL+ ++ G K
Sbjct: 1205 DKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFGLKF 1264
Query: 708 QDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENPTDML 767
++ P+ D++S I + +NPV H R KHI++KYHF+RE + L G + D+L
Sbjct: 1265 KEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQLEYCKGEDQLADVL 1324
Query: 768 TKTVT 772
TK ++
Sbjct: 1325 TKALS 1329
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 468 bits (1203), Expect = e-132
Identities = 292/796 (36%), Positives = 445/796 (55%), Gaps = 70/796 (8%)
Query: 6 VENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRTLNER 65
VENQ ++KS++SDN E EF K GI + TPEQN V ER ++ +
Sbjct: 680 VENQYDTRVKSVRSDNAKELAFTEFYK---AKGIVSFHSCPETPEQNSVVERKHQHILNV 736
Query: 66 ARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVFGCVS 125
AR + QS + +W D + TA +LINR PS L + P EV +GK S LK FGC+
Sbjct: 737 ARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLC 796
Query: 126 YVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYKDRSS 185
Y S +R K P++ C F+GY F GY+ D ++ + SRNV F+E L+ SS
Sbjct: 797 YSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNVEFHEE-LFPLASS 855
Query: 186 AESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIETPITQV 245
+S +++ SDV ++P + + + L P+ I +P TQ+
Sbjct: 856 QQSATTA----------------SDVF--TPMDPLSSGNSITSHL---PSPQI-SPSTQI 893
Query: 246 --RRSTRTPKAPQRY-------------SPSLNYLLLTDAGE-----------PEYFGEA 279
RR T+ P Q Y S SL+Y ++ + P+ + EA
Sbjct: 894 SKRRITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYINNISKIPIPQSYHEA 953
Query: 280 MQGNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKAR 338
DS +W A+ E+ ++++ TW +T LP GKKA+ +WV+ +K +DGS R+KAR
Sbjct: 954 ---KDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLERFKAR 1010
Query: 339 LVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIY 398
+V KG+ QK+G+D+TE FSPV KM T++++L + A++ +L QLD+ AFL+GDLEE IY
Sbjct: 1011 IVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLEETIY 1070
Query: 399 MTQPEGF-EVLGTK---NLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCF 454
M P+G+ ++ GT N+VC+L KS+YGLKQA RQW+ KF+ + GF + DH F
Sbjct: 1071 MKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLF 1130
Query: 455 VKKFADSYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRS 514
V+ +I+L +YVDD++IA + L + + +F++++LGP K LG+ ++R S
Sbjct: 1131 VRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEVART-S 1189
Query: 515 EGVLKLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASA 574
EG+ LSQ KY +LL ++ D S P+ +++ SK +++E Y V
Sbjct: 1190 EGI-SLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYRRLV----- 1243
Query: 575 VGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFR-RNNL 633
G LMY + TRPDI AV + +F S P H V +L+Y+KG+ L + ++L
Sbjct: 1244 -GKLMYLTI-TRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDL 1301
Query: 634 TLQEFSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKE 693
TL+ ++DAD G D +STTG+ +G + +SW+SK Q V+ S+ E+EY A++ A+ E
Sbjct: 1302 TLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASCE 1361
Query: 694 MIWLKSFLKELGKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELS 753
M WL + L L VP L+SDS + +++A NPVFH R KHI++ H +RE + + +L
Sbjct: 1362 MAWLSTLLLALRVHSGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQLK 1421
Query: 754 LLKILGSENPTDMLTK 769
LL + + D+LTK
Sbjct: 1422 LLHVKTKDQVADILTK 1437
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 451 bits (1160), Expect = e-127
Identities = 273/785 (34%), Positives = 434/785 (54%), Gaps = 42/785 (5%)
Query: 5 EVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRTLNE 64
+VENQ +K+K+++SDN E +F F +E GI + TPEQN V ER ++ +
Sbjct: 668 QVENQYKVKVKAVRSDNAPEL---KFTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILN 724
Query: 65 RARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVFGCV 124
AR + QS +P W D + TA +LINR PS L + P E+ +G L+ FGC+
Sbjct: 725 VARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCL 784
Query: 125 SYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYKDRS 184
Y +R K P++ C F+GY GY+ D ++ + SRNV F+E V
Sbjct: 785 CYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVF----P 840
Query: 185 SAESMSSSKQLKLSERVALEEISESDVVKRNQINPENEDDEVEVELEQEPTTVIETPITQ 244
A++ S LKL + +S S ++ +P + ++ Q + + P
Sbjct: 841 LAKNPGSESSLKLF--TPMVPVS-SGIISDTTHSPSSLPSQISDLPPQISSQRVRKPPAH 897
Query: 245 VRR-STRTPKAPQRY--SPSLNYLLL-----------TDAGEPEYFGEAMQGNDSIKWEL 290
+ T ++ +Y S +++Y + T P + EA D+ +W
Sbjct: 898 LNDYHCNTMQSDHKYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQ---DTKEWCE 954
Query: 291 AMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RRYKARLVVKGFQQKQG 349
A+ E+ +++K TW +T LP+GKKA+ +WV+ LK +DG+ RYKARLV KG+ QK+G
Sbjct: 955 AVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEG 1014
Query: 350 IDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLEEEIYMTQPEGFE--- 406
+D+T+ FSPV KMTTI+++L + A++ L+QLDV AFL+G+LEEEI+M PEG+
Sbjct: 1015 LDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERK 1074
Query: 407 -VLGTKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMDHCCFVKKFADSYIIL 465
++ N+V +L +S+YGLKQA RQW+KKF+ + + GF + DH F+K + ++I+
Sbjct: 1075 GIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIV 1134
Query: 466 ALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRISRNRSEGVLKLSQEKY 525
+YVDD++IA ++ +L +++ + F+++DLG K LG+ ++R + + + Q KY
Sbjct: 1135 LVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAG--ISICQRKY 1192
Query: 526 VEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVPYASAVGSLMYAMVCT 585
+LL + S P+ +LK K ++ E Y V G LMY + T
Sbjct: 1193 ALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIV------GKLMYLTI-T 1245
Query: 586 RPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCFRRNN-LTLQEFSDADLG 644
RPDI AV + +F S P H +L+Y+KG+ L + ++ LTL+ F+D+D
Sbjct: 1246 RPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWA 1305
Query: 645 GDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISEAAKEMIWLKSFLKEL 704
D +STT + +G + +SW+SK Q+ V+ S+ E+EY A++ A EM+WL + L L
Sbjct: 1306 SCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSL 1365
Query: 705 GKEQDVPPLFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELISDEELSLLKILGSENPT 764
VP L+SDS + I++A NPVFH R KHI++ H +RE + + EL LL + +
Sbjct: 1366 QASPPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVA 1425
Query: 765 DMLTK 769
D+LTK
Sbjct: 1426 DILTK 1430
>At1g70010 hypothetical protein
Length = 1315
Score = 436 bits (1121), Expect = e-122
Identities = 283/817 (34%), Positives = 414/817 (50%), Gaps = 59/817 (7%)
Query: 4 TEVENQTCLKIKSLKSDNGGEYDSQEFKKFCSENGIRMIKTILGTPEQNGVAERMNRTLN 63
T VENQ IK ++SDN E + F +F GI + TP+QN V ER ++ +
Sbjct: 516 TMVENQFETTIKGVRSDNAPELN---FTQFYHSKGIVPYHSCPETPQQNSVVERKHQHIL 572
Query: 64 ERARCMRIQSGLPKMFWVDAINTAAYLINRGPSIPLDYQLPEEVWSGKEVSLSHLKVFGC 123
AR + QS +P +W D I TA YLINR P+ L+ + P EV + + H+KVFGC
Sbjct: 573 NVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGC 632
Query: 124 VSYVLIDSDRRDKLDPKAIKCFFIGYGFDMYGYRFWDEQNKKIIRSRNVTFNESVLYKDR 183
+ Y R K P+A C FIGY GY+ D + II SR+V F+E +
Sbjct: 633 LCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELF---- 688
Query: 184 SSAESMSSSKQLKLSERVALEEISESDVVKR---NQINPENEDDEVEVELEQEPTTVIET 240
L E+ +++ + ++R + +NP + VE+ PT +
Sbjct: 689 -----PFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSSSVEILPSANPTNNVPE 743
Query: 241 PITQV-RRSTRTPKAPQRY-----------------------SPSLNYLLLTD-AGEPEY 275
P Q R + P Q Y P L +L D EP
Sbjct: 744 PSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPSN 803
Query: 276 FGEAMQGNDSIKWELAMKDEMTSLQKNGTWSLTKLPEGKKALQNRWVYRLKEESDGS-RR 334
+ EA + W AM E L+ TW + LP K+ + RW++++K SDGS R
Sbjct: 804 YTEAEKLQ---VWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVER 860
Query: 335 YKARLVVKGFQQKQGIDFTEIFSPVVKMTTIRVILSIVAAENLHLEQLDVKIAFLHGDLE 394
YKARLV +G+ QK+GID+ E FSPV K+ +++++L + A L L QLD+ AFL+GDL+
Sbjct: 861 YKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLD 920
Query: 395 EEIYMTQPEGFEVLG----TKNLVCKLHKSLYGLKQAPRQWYKKFNEFMSNSGFNRCDMD 450
EEIYM P+G+ N VC+L KSLYGLKQA RQWY KF+ + GF + D
Sbjct: 921 EEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCD 980
Query: 451 HCCFVKKFADSYIILALYVDDMLIAGSNMTEINRLKQQMSENFEMKDLGPAKQILGMRIS 510
H CF+K ++ + +Y+DD++IA +N ++ LK QM F+++DLG K LG+ I
Sbjct: 981 HTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIV 1040
Query: 511 RNRSEGVLKLSQEKYVEKLLDRFNVGDANTRSTPLGNHLKFSKKQSPQTDEEESYMSTVP 570
RS+ + +SQ KY LLD S P+ + F+ D ++ P
Sbjct: 1041 --RSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVFAH------DSGGDFVEVGP 1092
Query: 571 YASAVGSLMYAMVCTRPDIAHAVGVVSRFMSNPGKEHWECVKWILRYLKGSSRMCLCF-R 629
Y +G LMY + TRPDI AV +++F P K H + V IL+Y+KG+ L +
Sbjct: 1093 YRRLIGRLMYLNI-TRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYIKGTIGQGLFYSA 1151
Query: 630 RNNLTLQEFSDADLGGDSDGGKSTTGYIFTLGGTAVSWKSKLQNRVALSTTESEYVAISE 689
+ L L+ +++AD D +ST+GY LG + + WKS+ Q+ V+ S+ E+EY ++S
Sbjct: 1152 TSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSKSSAEAEYRSLSV 1211
Query: 690 AAKEMIWLKSFLKELGKEQDVPP-LFSDSQSVIFLAKNPVFHSRCKHIQMKYHFIRELIS 748
A E++WL +FLKEL P LF D+++ I +A N VFH R KHI+ H +RE +
Sbjct: 1212 ATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIESDCHSVRERLL 1271
Query: 749 DEELSLLKILGSENPTDMLTKTVTADNLRLCIASAGL 785
L I D TK + + I+ GL
Sbjct: 1272 KGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGL 1308
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,048,248
Number of Sequences: 26719
Number of extensions: 797921
Number of successful extensions: 3198
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2550
Number of HSP's gapped (non-prelim): 256
length of query: 799
length of database: 11,318,596
effective HSP length: 107
effective length of query: 692
effective length of database: 8,459,663
effective search space: 5854086796
effective search space used: 5854086796
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0065.18