BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0062.9
(271 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05090 unknown protein 407 e-114
At1g18080 putative guanine nucleotide-binding protein beta sub... 67 8e-12
At3g49660 putative WD-40 repeat - protein 63 2e-10
At4g02730 putative WD-repeat protein 62 4e-10
At3g18130 protein kinase C-receptor/G-protein, putative 62 4e-10
At1g48630 unknown protein 60 1e-09
At2g32700 unknown protein 59 2e-09
At2g26490 En/Spm-like transposon protein 59 4e-09
At5g08390 katanin p80 subunit - like protein 58 5e-09
At1g24530 unknown protein 58 6e-09
At2g43770 putative splicing factor 56 2e-08
At2g21390 coatomer alpha subunit 56 2e-08
At1g79990 coatomer protein like complex, subunit beta 2 (beta pr... 56 2e-08
At1g62020 hypothetical protein 55 3e-08
At1g52360 coatomer complex subunit, putative 55 4e-08
At3g15980 putative coatomer complex subunit 55 5e-08
At2g37670 putative WD-40 repeat protein 54 9e-08
At5g64730 unknown protein 54 1e-07
At5g50230 putative protein 52 3e-07
At1g49040 hypothetical protein; similar to EST emb|Z26090.1 52 3e-07
>At3g05090 unknown protein
Length = 753
Score = 407 bits (1046), Expect = e-114
Identities = 196/271 (72%), Positives = 226/271 (83%), Gaps = 5/271 (1%)
Query: 1 MHRVGSAGNTNSSTRPRKEKRLTYVLNDSDDTKHCAGINCLAVLKSAVSDGSDYLFTGSR 60
MHRVGSAG+ S R RKEK+LTYVLND++DTKHCAGINCL VLKS+VS+ YLFTGSR
Sbjct: 1 MHRVGSAGSNGGSVRTRKEKKLTYVLNDANDTKHCAGINCLDVLKSSVSNDQSYLFTGSR 60
Query: 61 DGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWDAFSTGTCTR 120
DG LKRWA EDA CSATFESHVDWVNDA L G+STLVSCSSDTT+KTWD S G CTR
Sbjct: 61 DGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTLVSCSSDTTVKTWDGLSDGVCTR 120
Query: 121 TLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGING 180
TLRQHSDYVTCLA + KN+N+VASGGLGGEVF+WD+EAA + K DA +D +SNG NG
Sbjct: 121 TLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANG 180
Query: 181 SGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEK 240
P+TSLR++ SSN+ISV ++ + GY P AKGHKESVYALAMN+ GT+LVSGGTEK
Sbjct: 181 -----PVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEK 235
Query: 241 VVRVWDPRSGSKTMKLKGHTDNIRALLLDST 271
V+RVWDPR+GSK+MKL+GHTDN+R LLLDST
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRVLLLDST 266
>At1g18080 putative guanine nucleotide-binding protein beta
subunit
Length = 327
Score = 67.4 bits (163), Expect = 8e-12
Identities = 69/225 (30%), Positives = 98/225 (42%), Gaps = 32/225 (14%)
Query: 43 VLKSAVSDGSDYLFTGSRDGRLKRW-ALGEDAATCSATFESHVDWVNDAVLVGDS---TL 98
VL A S + + + SRD +K W LGE T S E H DWV+ ++ T+
Sbjct: 108 VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 167
Query: 99 VSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEA 158
VS S D T+K W+ S TL H+ YV+ +A S S + ASGG G V +WDL
Sbjct: 168 VSASWDKTVKVWN-LSNCKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDL-- 223
Query: 159 AHASAAKCIDATDDDTSNGINGSGN----------SLPLTSLRSISSSNSISV------H 202
A K + + + S N + + L S S + V
Sbjct: 224 --AEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAE 281
Query: 203 TTQNQGYIPIAAKGHKESVYALAMN--EGGTLLVSGGTEKVVRVW 245
N G P A K ++ +Y ++N G+ L SG T+ V+RVW
Sbjct: 282 KADNSG--PAATK--RKVIYCTSLNWSADGSTLFSGYTDGVIRVW 322
Score = 55.5 bits (132), Expect = 3e-08
Identities = 58/215 (26%), Positives = 87/215 (39%), Gaps = 8/215 (3%)
Query: 50 DGSDYLFTGSRDGRLKRWALGEDA---ATCSATFESHVDWVNDAVLVGDSTL-VSCSSDT 105
D +D + + SRD + W L +D H +V D VL D +S S D
Sbjct: 26 DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 85
Query: 106 TLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAK 165
L+ WD + G TR H+ V +A S N IV S + +W+
Sbjct: 86 ELRLWD-LAAGVSTRRFVGHTKDVLSVAFSLDNRQIV-SASRDRTIKLWNTLGECKYTIS 143
Query: 166 CIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALA 225
D + + S N+L T + S S ++ V N A GH V +A
Sbjct: 144 EGGEGHRDWVSCVRFSPNTLQPTIV-SASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVA 201
Query: 226 MNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHT 260
++ G+L SGG + VV +WD G K L+ ++
Sbjct: 202 VSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS 236
Score = 41.6 bits (96), Expect = 5e-04
Identities = 31/143 (21%), Positives = 55/143 (37%), Gaps = 44/143 (30%)
Query: 121 TLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGING 180
T+R H+D VT +A N++I+ S + +W L T DD + G+
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKL-------------TKDDKAYGV-- 54
Query: 181 SGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEK 240
+ R ++ GH V + ++ G +SG +
Sbjct: 55 --------AQRRLT---------------------GHSHFVEDVVLSSDGQFALSGSWDG 85
Query: 241 VVRVWDPRSGSKTMKLKGHTDNI 263
+R+WD +G T + GHT ++
Sbjct: 86 ELRLWDLAAGVSTRRFVGHTKDV 108
>At3g49660 putative WD-40 repeat - protein
Length = 317
Score = 62.8 bits (151), Expect = 2e-10
Identities = 57/224 (25%), Positives = 99/224 (43%), Gaps = 42/224 (18%)
Query: 80 FESHVDWVNDAVLVGDST-LVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKN 138
F H + ++D D+ +VS S D TLK WD TG+ +TL H++Y C+ + +
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDV-ETGSLIKTLIGHTNYAFCVNFNPQ- 124
Query: 139 SNIVASGGLGGEVFVWDLEA--------AHASAAKCIDATDD------DTSNGI-----N 179
SN++ SG V +WD+ AH+ +D D + +G+ +
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 180 GSGNSL---------PLTSLRSISSSNSISVHTTQN--QGYIPIAAK------GHKESVY 222
G+G+ + P++ +R + I V T N + + +AK GH + Y
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQY 244
Query: 223 ALAMN---EGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNI 263
++ G +VSG + V +W+ S KL+GHT+ +
Sbjct: 245 CISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETV 288
Score = 56.2 bits (134), Expect = 2e-08
Identities = 52/204 (25%), Positives = 82/204 (39%), Gaps = 26/204 (12%)
Query: 52 SDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDSTL-VSCSSDTTLKTW 110
S+ + +GS D ++ W + C +H D V D +L VS S D + W
Sbjct: 125 SNMIVSGSFDETVRIWDV--TTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 111 DAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAA--------HAS 162
D+ TG C +TL + N + G L + +W++ +A H +
Sbjct: 183 DS-GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVN 241
Query: 163 AAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQ-NQGYIPIAAKGHKESV 221
A CI + T NG R +S S VH + N + +GH E+V
Sbjct: 242 AQYCISSAFSVT----NGK---------RIVSGSEDNCVHMWELNSKKLLQKLEGHTETV 288
Query: 222 YALAMNEGGTLLVSGGTEKVVRVW 245
+A + L+ SG +K VR+W
Sbjct: 289 MNVACHPTENLIASGSLDKTVRIW 312
Score = 38.9 bits (89), Expect = 0.003
Identities = 31/155 (20%), Positives = 64/155 (41%), Gaps = 3/155 (1%)
Query: 112 AFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATD 171
+F+ ++TL H+ V+ + S + ++AS + + + + A+ +
Sbjct: 10 SFTPYVHSQTLTSHNRAVSSVKFSS-DGRLLASASADKTIRTYTINTINDPIAEPVQEFT 68
Query: 172 DDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGT 231
NGI+ S + S S ++ + + I GH + + N
Sbjct: 69 GH-ENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI-GHTNYAFCVNFNPQSN 126
Query: 232 LLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
++VSG ++ VR+WD +G L H+D + A+
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAV 161
>At4g02730 putative WD-repeat protein
Length = 333
Score = 61.6 bits (148), Expect = 4e-10
Identities = 61/271 (22%), Positives = 108/271 (39%), Gaps = 50/271 (18%)
Query: 34 HCAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLV 93
H A I+C+ S+ + L + S D + W+ + +E H ++D
Sbjct: 42 HTAAISCVKF-----SNDGNLLASASVDKTMILWSATNYSLI--HRYEGHSSGISDLAWS 94
Query: 94 GDSTLV-SCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVF 152
DS S S D TL+ WDA S C + LR H+++V C+ + SN++ SG +
Sbjct: 95 SDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP-SNLIVSGSFDETIR 153
Query: 153 VWDLE-----------------------------AAHASAAKCIDATD--------DDTS 175
+W+++ A+H + K DA + DD S
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213
Query: 176 NGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMN---EGGTL 232
++ + S P +++ +S + G GH V+ + G
Sbjct: 214 PAVSFAKFS-PNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 272
Query: 233 LVSGGTEKVVRVWDPRSGSKTMKLKGHTDNI 263
+VSG + V +WD ++ + +L+GHTD +
Sbjct: 273 IVSGSEDNCVYLWDLQARNILQRLEGHTDAV 303
Score = 41.6 bits (96), Expect = 5e-04
Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 7/141 (4%)
Query: 120 RTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGIN 179
+TL H+ ++C+ S + N++AS + + +W A+ I + +S GI+
Sbjct: 37 KTLEGHTAAISCVKFSN-DGNLLASASVDKTMILWS-----ATNYSLIHRYEGHSS-GIS 89
Query: 180 GSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTE 239
S S S ++ + ++ +GH V+ + N L+VSG +
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 240 KVVRVWDPRSGSKTMKLKGHT 260
+ +R+W+ ++G +K H+
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHS 170
Score = 32.7 bits (73), Expect = 0.21
Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 18/103 (17%)
Query: 176 NGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPI--------AAKGHKESVYALAMN 227
+G NG+ N + +N+ S G +PI +GH ++ + +
Sbjct: 3 SGGNGTSNGV----------ANANSTGNAGTSGNVPIYKPYRHLKTLEGHTAAISCVKFS 52
Query: 228 EGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRALLLDS 270
G LL S +K + +W + S + +GH+ I L S
Sbjct: 53 NDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
>At3g18130 protein kinase C-receptor/G-protein, putative
Length = 326
Score = 61.6 bits (148), Expect = 4e-10
Identities = 64/221 (28%), Positives = 98/221 (43%), Gaps = 25/221 (11%)
Query: 43 VLKSAVSDGSDYLFTGSRDGRLKRW-ALGEDAATCSATFESHVDWVNDAVLVGDS---TL 98
VL A S + + + SRD +K W LGE T S + H +WV+ ++ T+
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG-DGHKEWVSCVRFSPNTLVPTI 166
Query: 99 VSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEA 158
VS S D T+K W+ +L HS Y+ +A S S + ASGG G + +WDL
Sbjct: 167 VSASWDKTVKVWN-LQNCKLRNSLVGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDL-- 222
Query: 159 AHASAAKCIDATDDDTSNGIN--------GSGNSLPLTSLRSISSSNSISV----HTTQN 206
A ++A S + + NS+ + L S S + V +N
Sbjct: 223 AEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKN 282
Query: 207 QGYIPIAAKGHKESVYALAMN--EGGTLLVSGGTEKVVRVW 245
+G + K+ +Y ++N G+ L SG T+ VVRVW
Sbjct: 283 EG--GVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 321
Score = 58.5 bits (140), Expect = 4e-09
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 9/212 (4%)
Query: 50 DGSDYLFTGSRDGRLKRWALGEDAATCSAT---FESHVDWVNDAVLVGDSTL-VSCSSDT 105
D SD + T SRD + W L +D + H +V D VL D +S S D
Sbjct: 26 DNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG 85
Query: 106 TLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAK 165
L+ WD +TG TR H+ V +A S N IV S + +W+
Sbjct: 86 ELRLWD-LATGETTRRFVGHTKDVLSVAFSTDNRQIV-SASRDRTIKLWNTLGECKYTIS 143
Query: 166 CIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALA 225
D + S + S N+L + ++ S S ++ V QN + + GH + +A
Sbjct: 144 EGDGHKEWVSC-VRFSPNTL-VPTIVSASWDKTVKVWNLQNCK-LRNSLVGHSGYLNTVA 200
Query: 226 MNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLK 257
++ G+L SGG + V+ +WD G K L+
Sbjct: 201 VSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 44.7 bits (104), Expect = 5e-05
Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 41/225 (18%)
Query: 49 SDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHV-DWVNDAVLVGDSTLVSCSSDTTL 107
SDG + +GS DG L+ W L T F H D ++ A + +VS S D T+
Sbjct: 73 SDGQ-FALSGSWDGELRLWDLATGETT--RRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 108 KTWDAFSTGTCTRTLRQ---HSDYVTCLAASEKNS-NIVASGGLGGEVFVWDLEAAHASA 163
K W+ G C T+ + H ++V+C+ S + S V VW+L+
Sbjct: 130 KLWNTL--GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR- 186
Query: 164 AKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYA 223
++ G +G N++ ++ S+ +S G I + + +Y+
Sbjct: 187 ---------NSLVGHSGYLNTVAVSPDGSLCASGG-------KDGVILLWDLAEGKKLYS 230
Query: 224 LAMNEGGTLLVS-----------GGTEKVVRVWDPRSGSKTMKLK 257
L E G+++ S TE +R+WD S S LK
Sbjct: 231 L---EAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 43.1 bits (100), Expect = 2e-04
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 16/188 (8%)
Query: 82 SHVDWVNDAVLVGDST--LVSCSSDTTLKTW----DAFSTGTCTRTLRQHSDYVTCLAAS 135
+H D V D++ +V+ S D ++ W D S G R L HS +V + S
Sbjct: 13 AHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLS 72
Query: 136 EKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISS 195
+ SG GE+ +WDL A + + + T D S + + S S
Sbjct: 73 S-DGQFALSGSWDGELRLWDL-ATGETTRRFVGHTKDVLSVAFSTDNRQIV-----SASR 125
Query: 196 SNSISVHTTQNQGYIPIA-AKGHKESVYALAMNEGGTL--LVSGGTEKVVRVWDPRSGSK 252
+I + T + I+ GHKE V + + + +VS +K V+VW+ ++
Sbjct: 126 DRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL 185
Query: 253 TMKLKGHT 260
L GH+
Sbjct: 186 RNSLVGHS 193
Score = 41.2 bits (95), Expect = 6e-04
Identities = 31/142 (21%), Positives = 54/142 (37%), Gaps = 44/142 (30%)
Query: 122 LRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGINGS 181
+R H+D VT +A NS+I+ + + +W L T DD S G+
Sbjct: 11 MRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKL-------------TKDDKSYGV--- 54
Query: 182 GNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKV 241
+ R ++ GH V + ++ G +SG +
Sbjct: 55 -------AQRRLT---------------------GHSHFVEDVVLSSDGQFALSGSWDGE 86
Query: 242 VRVWDPRSGSKTMKLKGHTDNI 263
+R+WD +G T + GHT ++
Sbjct: 87 LRLWDLATGETTRRFVGHTKDV 108
>At1g48630 unknown protein
Length = 326
Score = 60.1 bits (144), Expect = 1e-09
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 10/227 (4%)
Query: 35 CAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSAT---FESHVDWVNDAV 91
CA + + + + V D SD + T SRD + W L ++ + H +V D V
Sbjct: 12 CAHTDMVTAIATPV-DNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV 70
Query: 92 LVGDSTL-VSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGE 150
L D +S S D L+ WD +TG TR H+ V +A S N IV S
Sbjct: 71 LSSDGQFALSGSWDGELRLWD-LATGESTRRFVGHTKDVLSVAFSTDNRQIV-SASRDRT 128
Query: 151 VFVWDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYI 210
+ +W+ D + S + S N+L + ++ S S ++ V QN
Sbjct: 129 IKLWNTLGECKYTISEADGHKEWVSC-VRFSPNTL-VPTIVSASWDKTVKVWNLQNCKLR 186
Query: 211 PIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLK 257
A GH + +A++ G+L SGG + V+ +WD G K L+
Sbjct: 187 NTLA-GHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 59.7 bits (143), Expect = 2e-09
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 33/225 (14%)
Query: 43 VLKSAVSDGSDYLFTGSRDGRLKRW-ALGEDAATCSATFESHVDWVNDAVLVGDS---TL 98
VL A S + + + SRD +K W LGE T S + H +WV+ ++ T+
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEA-DGHKEWVSCVRFSPNTLVPTI 166
Query: 99 VSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEA 158
VS S D T+K W+ TL HS Y+ +A S S + ASGG G + +WDL
Sbjct: 167 VSASWDKTVKVWN-LQNCKLRNTLAGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDL-- 222
Query: 159 AHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIP-----IA 213
A K + + S N L + ++ NSI + +++ + +
Sbjct: 223 --AEGKKLYSLEAGSIIHSLCFSPNRYWLCA----ATENSIRIWDLESKSVVEDLKVDLK 276
Query: 214 AKGHKES-----------VYALAMN--EGGTLLVSGGTEKVVRVW 245
A+ K +Y ++N G L SG T+ V+RVW
Sbjct: 277 AEAEKTDGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVW 321
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 41/225 (18%)
Query: 49 SDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHV-DWVNDAVLVGDSTLVSCSSDTTL 107
SDG + +GS DG L+ W L +T F H D ++ A + +VS S D T+
Sbjct: 73 SDGQ-FALSGSWDGELRLWDLATGEST--RRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 108 KTWDAFSTGTCTRTLRQ---HSDYVTCLAASEKNS-NIVASGGLGGEVFVWDLEAAHASA 163
K W+ G C T+ + H ++V+C+ S + S V VW+L+
Sbjct: 130 KLWNTL--GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR- 186
Query: 164 AKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYA 223
+T G +G N++ ++ S+ +S G I + + +Y+
Sbjct: 187 ---------NTLAGHSGYLNTVAVSPDGSLCASGG-------KDGVILLWDLAEGKKLYS 230
Query: 224 LAMNEGGTLLVS-----------GGTEKVVRVWDPRSGSKTMKLK 257
L E G+++ S TE +R+WD S S LK
Sbjct: 231 L---EAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 44.7 bits (104), Expect = 5e-05
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 16/191 (8%)
Query: 79 TFESHVDWVNDAVLVGDST--LVSCSSDTTLKTW----DAFSTGTCTRTLRQHSDYVTCL 132
T +H D V D++ +V+ S D ++ W + S G R + HS +V +
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 133 AASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRS 192
S + SG GE+ +WDL A S + + T D S + + S
Sbjct: 70 VLSS-DGQFALSGSWDGELRLWDL-ATGESTRRFVGHTKDVLSVAFSTDNRQIV-----S 122
Query: 193 ISSSNSISVHTTQNQGYIPIA-AKGHKESVYALAMNEGGTL--LVSGGTEKVVRVWDPRS 249
S +I + T + I+ A GHKE V + + + +VS +K V+VW+ ++
Sbjct: 123 ASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 250 GSKTMKLKGHT 260
L GH+
Sbjct: 183 CKLRNTLAGHS 193
Score = 38.9 bits (89), Expect = 0.003
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 44/143 (30%)
Query: 121 TLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTSNGING 180
T+ H+D VT +A NS+++ + + +W L T +D S G+
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKL-------------TKEDKSYGV-- 54
Query: 181 SGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEK 240
+ R ++ GH V + ++ G +SG +
Sbjct: 55 --------AQRRMT---------------------GHSHFVQDVVLSSDGQFALSGSWDG 85
Query: 241 VVRVWDPRSGSKTMKLKGHTDNI 263
+R+WD +G T + GHT ++
Sbjct: 86 ELRLWDLATGESTRRFVGHTKDV 108
>At2g32700 unknown protein
Length = 787
Score = 59.3 bits (142), Expect = 2e-09
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 16/218 (7%)
Query: 35 CAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVG 94
C + V+ + S L + D ++ W + + +T E H + D
Sbjct: 505 CIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNM--ETLQVESTPEEHAHIITDVRFRP 562
Query: 95 DSTLVSCSS-DTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFV 153
+ST ++ SS D T+K WDA G RT+ H+ V + K + ++ S ++
Sbjct: 563 NSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRF 622
Query: 154 WDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLT-SLRSISSSNSISVHTTQNQGYIPI 212
WD+ A+ A K G + P T + +S N++S+ +N
Sbjct: 623 WDINASCVRAVK-----------GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVN 671
Query: 213 AAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSG 250
KGH +V+++ + G LV+ +E V++W SG
Sbjct: 672 IFKGHSSNVHSVCWSPNGE-LVASVSEDAVKLWSLSSG 708
Score = 30.4 bits (67), Expect = 1.1
Identities = 49/228 (21%), Positives = 77/228 (33%), Gaps = 39/228 (17%)
Query: 52 SDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDST--LVSCSSDTTLKT 109
S L T S D +K W D T H V T L SC S+ ++
Sbjct: 564 STQLATSSFDKTIKIWD-ASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRF 622
Query: 110 WDAFSTGTCTRTLRQHSDYVTC-------LAASEKNS-------------NIVASGGLGG 149
WD +C R ++ S V LAA+ +N+ NI
Sbjct: 623 WDI--NASCVRAVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNV 680
Query: 150 EVFVWD-----LEAAHASAAKCIDATDDDTSNGINGSGNSL-------PLTSLRSISSSN 197
W + + A K + D + ++ SGN L I
Sbjct: 681 HSVCWSPNGELVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQ 740
Query: 198 SISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVW 245
+I + T + +A GH+ + ALA + ++ S +K V++W
Sbjct: 741 AIELWNTMENKCMTVA--GHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g26490 En/Spm-like transposon protein
Length = 465
Score = 58.5 bits (140), Expect = 4e-09
Identities = 58/227 (25%), Positives = 93/227 (40%), Gaps = 28/227 (12%)
Query: 33 KHCAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVL 92
KH ++CL++ +D L++ S D +K W + + + C + +H D VN V
Sbjct: 204 KHADAVSCLSL-----NDEQGLLYSASWDRTIKVWRIAD--SKCLESIPAHDDAVNSVVS 256
Query: 93 VGDSTLVSCSSDTTLKTWDAFSTG-----TCTRTLRQHSDYVTCLAASEKNSNIVASGGL 147
++ + S S+D T+K W G T +TL + VT LA S KN V G
Sbjct: 257 TTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVS-KNGAAVYFGSS 315
Query: 148 GGEVFVWDLE---------AAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNS 198
G V W+ E H A C++ S +GS + R +
Sbjct: 316 DGLVNFWEREKQLNYGGILKGHKLAVLCLEVAG---SLVFSGSADKTICVWKRDGNIHTC 372
Query: 199 ISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVW 245
+SV T +A + +E A + ++ SG +K V+VW
Sbjct: 373 LSVLTGHTGPVKCLAVEADRE---ASERRDKKWIVYSGSLDKSVKVW 416
Score = 53.9 bits (128), Expect = 9e-08
Identities = 63/290 (21%), Positives = 108/290 (36%), Gaps = 44/290 (15%)
Query: 20 KRLTYVLNDSDDT------KHCAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALG--- 70
K L Y +DS + K + C + L A+ + +FTG +DG+++ W +
Sbjct: 106 KDLLYTGSDSKNIRVWKNLKEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKN 165
Query: 71 -------------EDAATCSATFESHVD--------WVNDAVLVG-------DSTLVSCS 102
+D S ++V+ W+ A V L S S
Sbjct: 166 QSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSAS 225
Query: 103 SDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHAS 162
D T+K W + C ++ H D V + ++ IV SG G V W +
Sbjct: 226 WDRTIKVW-RIADSKCLESIPAHDDAVNSVVST--TEAIVFSGSADGTVKAWKRDQQGKY 282
Query: 163 AAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVY 222
+ T + + S ++ SS ++ + Q KGHK +V
Sbjct: 283 TKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKLAV- 341
Query: 223 ALAMNEGGTLLVSGGTEKVVRVW--DPRSGSKTMKLKGHTDNIRALLLDS 270
L + G+L+ SG +K + VW D + L GHT ++ L +++
Sbjct: 342 -LCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEA 390
>At5g08390 katanin p80 subunit - like protein
Length = 823
Score = 58.2 bits (139), Expect = 5e-09
Identities = 60/234 (25%), Positives = 88/234 (36%), Gaps = 58/234 (24%)
Query: 34 HCAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLV 93
H A +NCL + + + S L TG D ++ WA+G+ A S
Sbjct: 108 HSAAVNCLKIGRKS----SRVLVTGGEDHKVNLWAIGKPNAILS---------------- 147
Query: 94 GDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFV 153
L SS T+DA + +VA+G G + +
Sbjct: 148 ----LYGHSSGIDSVTFDA-------------------------SEGLVAAGAASGTIKL 178
Query: 154 WDLEAAHASAAKCIDATDDDTSNGINGSGNSLPLTSL-RSISSSNSISVHTTQNQGYIPI 212
WDLE A K + SN + S N P S S ++ + + +G I
Sbjct: 179 WDLEEA-----KVVRTLTGHRSNCV--SVNFHPFGEFFASGSLDTNLKIWDIRKKGCIH- 230
Query: 213 AAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
KGH V L G +VSGG + VV+VWD +G + K H I++L
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL 284
>At1g24530 unknown protein
Length = 418
Score = 57.8 bits (138), Expect = 6e-09
Identities = 60/232 (25%), Positives = 98/232 (41%), Gaps = 60/232 (25%)
Query: 42 AVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDSTLVSC 101
AV AVSDG ++++ S D LK W + C + ++H D VN + + T+ +
Sbjct: 197 AVTALAVSDG--FIYSVSWDKTLKIWRASD--LRCKESIKAHDDAVNAIAVSTNGTVYTG 252
Query: 102 SSDTTLKTWDAFSTG----TCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLE 157
S+D ++ W A TG T TL +H V LA ++ S ++ SG + VW+ E
Sbjct: 253 SADRRIRVW-AKPTGEKRHTLVATLEKHKSAVNALALNDDGS-VLFSGSCDRSILVWERE 310
Query: 158 AAHASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGH 217
DTSN + G A +GH
Sbjct: 311 ---------------DTSNYMAVRG------------------------------ALRGH 325
Query: 218 KESVYALAMNEGGTLLVSGGTEKVVRVW--DPRSGSKTMK-LKGHTDNIRAL 266
+++ L++ LL+SG ++ VR+W P S ++ L GHT +++L
Sbjct: 326 DKAI--LSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSL 375
Score = 46.6 bits (109), Expect = 1e-05
Identities = 41/142 (28%), Positives = 65/142 (44%), Gaps = 21/142 (14%)
Query: 124 QHSDYVTCLAASEKNSNIVASGGLGGEVFVWD--LEAAHASAAKCIDA--TDDDTSNGIN 179
+H+D VT LA S+ V+ WD L+ AS +C ++ DD N I
Sbjct: 193 EHADAVTALAVSDGFIYSVS----------WDKTLKIWRASDLRCKESIKAHDDAVNAIA 242
Query: 180 GSGNSLPLTSLRSISSSNSISVH---TTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSG 236
S N T S+ I V T + + + + HK +V ALA+N+ G++L SG
Sbjct: 243 VSTNGTVYTG----SADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSG 298
Query: 237 GTEKVVRVWDPRSGSKTMKLKG 258
++ + VW+ S M ++G
Sbjct: 299 SCDRSILVWEREDTSNYMAVRG 320
Score = 28.5 bits (62), Expect = 4.0
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 52 SDYLFTGSRDGRLKRWALGEDAA-TCSATFESHVDWVNDAVLVGDS------TLVSCSSD 104
SD L +GS D ++ W G D++ +C H V V + +++S S D
Sbjct: 336 SDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLD 395
Query: 105 TTLKTW 110
+K W
Sbjct: 396 GEVKCW 401
>At2g43770 putative splicing factor
Length = 343
Score = 55.8 bits (133), Expect = 2e-08
Identities = 56/276 (20%), Positives = 104/276 (37%), Gaps = 51/276 (18%)
Query: 42 AVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGD-STLVS 100
AV + + +GS D + W + D + H + + D D S +VS
Sbjct: 55 AVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMV-LKGHKNAILDLHWTSDGSQIVS 113
Query: 101 CSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAH 160
S D T++ WD TG + + +HS +V + + ++ SG G +WD+
Sbjct: 114 ASPDKTVRAWDV-ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRG 172
Query: 161 A----------SAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQG-- 208
A +A DA D + G++ N + + LR ++ ++ H G
Sbjct: 173 AIQTFPDKYQITAVSFSDAADKIFTGGVD---NDVKVWDLRKGEATMTLEGHQDTITGMS 229
Query: 209 ------------------------YIPIAA-----KGHK----ESVYALAMNEGGTLLVS 235
Y P +GH+ +++ + + GT + +
Sbjct: 230 LSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTA 289
Query: 236 GGTEKVVRVWDPRSGSKTMKLKGHTDNIRALLLDST 271
G ++++V +WD S KL GHT ++ + T
Sbjct: 290 GSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPT 325
Score = 37.4 bits (85), Expect = 0.009
Identities = 18/49 (36%), Positives = 26/49 (52%), Gaps = 1/49 (2%)
Query: 216 GHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKT-MKLKGHTDNI 263
GH +VY + N GTL+ SG ++ + +W K M LKGH + I
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAI 99
>At2g21390 coatomer alpha subunit
Length = 1218
Score = 55.8 bits (133), Expect = 2e-08
Identities = 49/214 (22%), Positives = 86/214 (39%), Gaps = 29/214 (13%)
Query: 57 TGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDST-LVSCSSDTTLKTWDAFST 115
+G D ++K W C T H+D++ ++ +VS S D T++ W+ + +
Sbjct: 68 SGGDDYKIKVW--NYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN-WQS 124
Query: 116 GTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTS 175
TC L H+ YV C A+ ++V S L V VWD+ A +A
Sbjct: 125 RTCISVLTGHNHYVMC-ASFHPKEDLVVSASLDQTVRVWDIGALKKKSAS---------- 173
Query: 176 NGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVS 235
P L S NS + +GH V + + L+VS
Sbjct: 174 ----------PADDLMRFSQMNSDLFGGV--DAIVKYVLEGHDRGVNWASFHPTLPLIVS 221
Query: 236 GGTEKVVRVW--DPRSGSKTMKLKGHTDNIRALL 267
G ++ V++W + + L+GH +N+ +++
Sbjct: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Score = 36.2 bits (82), Expect = 0.019
Identities = 29/104 (27%), Positives = 51/104 (48%), Gaps = 4/104 (3%)
Query: 55 LFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVL-VGDSTLVSCSSDTTLKTWDAF 113
+ +G+ D ++K W + E A T H++ V+ + +VS S D +++ WDA
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA- 277
Query: 114 STGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLE 157
+ T +T R+ D LA N++A+G G + V+ LE
Sbjct: 278 TKRTGIQTFRREHDRFWILAV-HPEINLLAAGHDNG-MIVFKLE 319
Score = 30.8 bits (68), Expect = 0.80
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 217 HKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
H+ V + + L VSGG + ++VW+ ++ L GH D IR +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTV 99
>At1g79990 coatomer protein like complex, subunit beta 2 (beta
prime)
Length = 920
Score = 55.8 bits (133), Expect = 2e-08
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 24/176 (13%)
Query: 80 FESHVDWVND-AVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKN 138
FE+H D++ AV ++S S D +K WD CT+ HS YV + + K+
Sbjct: 95 FEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKD 154
Query: 139 SNIVASGGLGGEVFVWDLEA--------AHASAAKCID-ATDDDTSNGINGSGNSLPLTS 189
+N AS L + +W+L + AH C+D T D I G
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITG--------- 205
Query: 190 LRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVW 245
S ++ V Q + + +GH +V A++ + ++++G + VR+W
Sbjct: 206 ----SDDHTAKVWDYQTKSCVQ-TLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At1g62020 hypothetical protein
Length = 1216
Score = 55.5 bits (132), Expect = 3e-08
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 29/214 (13%)
Query: 57 TGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDST-LVSCSSDTTLKTWDAFST 115
+G D ++K W C T H+D++ + +VS S D T++ W+ + +
Sbjct: 68 SGGDDYKIKVWNYKNHR--CLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN-WQS 124
Query: 116 GTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATDDDTS 175
TC L H+ YV C A+ ++V S L V VWD+ A K + DD
Sbjct: 125 RTCVSVLTGHNHYVMC-ASFHPKEDLVVSASLDQTVRVWDIGALRK---KTVSPADD--- 177
Query: 176 NGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVS 235
+ LT + S ++ + +GH V A + L+VS
Sbjct: 178 --------IMRLTQMNSDLFGGVDAI--------VKYVLEGHDRGVNWAAFHPTLPLIVS 221
Query: 236 GGTEKVVRVW--DPRSGSKTMKLKGHTDNIRALL 267
G ++ V++W + + L+GH +N+ +++
Sbjct: 222 GADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVM 255
Score = 36.6 bits (83), Expect = 0.015
Identities = 29/104 (27%), Positives = 51/104 (48%), Gaps = 4/104 (3%)
Query: 55 LFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVL-VGDSTLVSCSSDTTLKTWDAF 113
+ +G+ D ++K W + E A T H++ V+ + +VS S D +++ WDA
Sbjct: 219 IVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA- 277
Query: 114 STGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLE 157
+ T +T R+ D LA N++A+G G + V+ LE
Sbjct: 278 TKRTGLQTFRREHDRFWILAV-HPEMNLLAAGHDSG-MIVFKLE 319
Score = 30.8 bits (68), Expect = 0.80
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 217 HKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRAL 266
H+ V + + L VSGG + ++VW+ ++ L GH D IR +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTV 99
>At1g52360 coatomer complex subunit, putative
Length = 926
Score = 55.1 bits (131), Expect = 4e-08
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 24/176 (13%)
Query: 80 FESHVDWVND-AVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKN 138
FE+H D++ AV ++S S D +K WD CT+ HS YV + + K+
Sbjct: 95 FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKD 154
Query: 139 SNIVASGGLGGEVFVWDLEA--------AHASAAKCID-ATDDDTSNGINGSGNSLPLTS 189
+N AS L + +W+L + AH C+D T D I G
Sbjct: 155 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITG--------- 205
Query: 190 LRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVW 245
S ++ V Q + + +GH +V A+ + ++++G + VR+W
Sbjct: 206 ----SDDHTAKVWDYQTKSCVQ-TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980 putative coatomer complex subunit
Length = 921
Score = 54.7 bits (130), Expect = 5e-08
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 24/176 (13%)
Query: 80 FESHVDWVND-AVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKN 138
FE+H D++ AV ++S S D +K WD + CT+ HS YV + + K+
Sbjct: 98 FEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKD 157
Query: 139 SNIVASGGLGGEVFVWDLEA--------AHASAAKCID-ATDDDTSNGINGSGNSLPLTS 189
+N AS L + +W+L + AH C+D T D I G
Sbjct: 158 TNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITG--------- 208
Query: 190 LRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVW 245
S ++ V Q + + GH +V A+ + ++++G + VR+W
Sbjct: 209 ----SDDHTAKVWDYQTKSCVQ-TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 259
>At2g37670 putative WD-40 repeat protein
Length = 903
Score = 53.9 bits (128), Expect = 9e-08
Identities = 30/89 (33%), Positives = 45/89 (49%), Gaps = 4/89 (4%)
Query: 72 DAATCSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTC 131
D CS + H+D + D L+S S D T++ WD T TC + L H+DYVTC
Sbjct: 496 DKPVCS--LKGHLDAILDLSWSKSQLLLSSSMDKTVRLWD-IETKTCLK-LFAHNDYVTC 551
Query: 132 LAASEKNSNIVASGGLGGEVFVWDLEAAH 160
+ S + N SG L ++ +W ++ H
Sbjct: 552 IQFSPVDENYFLSGSLDAKIRIWSIQDRH 580
Score = 30.8 bits (68), Expect = 0.80
Identities = 14/57 (24%), Positives = 28/57 (48%)
Query: 215 KGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRALLLDST 271
+ H+ +V+ + ++ L SGG ++V+ VW+ + +G I L DS+
Sbjct: 401 QAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSS 457
>At5g64730 unknown protein
Length = 299
Score = 53.5 bits (127), Expect = 1e-07
Identities = 51/219 (23%), Positives = 88/219 (39%), Gaps = 14/219 (6%)
Query: 42 AVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDST-LVS 100
AVL + + +Y T +D ++ W T++SH V D + D+ S
Sbjct: 20 AVLAARFNGDGNYALTCGKDRTIRLW--NPHRGILIKTYKSHGREVRDVHVTSDNAKFCS 77
Query: 101 CSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAH 160
C D + WD STG R R H V + ++ +S++V S G + VWD +
Sbjct: 78 CGGDRQVYYWDV-STGRVIRKFRGHDGEVNAVKFND-SSSVVVSAGFDRSLRVWDCRSHS 135
Query: 161 ASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKES 220
+ ID D S+ LT I S +V T + + + +
Sbjct: 136 VEPVQIIDTFLDTVM--------SVVLTKTEIIGGSVDGTVRTFDMRIGREM-SDNLGQP 186
Query: 221 VYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGH 259
V ++++ G +++G + +R+ D +G KGH
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGH 225
Score = 35.8 bits (81), Expect = 0.025
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 215 KGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIR 264
KGH+ +V A N G ++ G ++ +R+W+P G K H +R
Sbjct: 15 KGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVR 64
Score = 27.3 bits (59), Expect = 8.9
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 206 NQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLKGHTDNIRA 265
++G + K H V + + S G ++ V WD +G K +GH + A
Sbjct: 48 HRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNA 107
Query: 266 L 266
+
Sbjct: 108 V 108
>At5g50230 putative protein
Length = 515
Score = 52.4 bits (124), Expect = 3e-07
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 10/198 (5%)
Query: 52 SDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDSTLVSCSSDTTLKTWD 111
S LFTG +D +K W + + S + ++ AV + ++++ +S L WD
Sbjct: 243 SGTLFTGGQDRAVKMWDTNS-GTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWD 301
Query: 112 AFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHASAAKCIDATD 171
S+G TL H+D V + S+ +S V S + +WDL + + +
Sbjct: 302 V-SSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTS-- 358
Query: 172 DDTSNGINGSGNSLPLTSLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGT 231
N I S + L + S + + T G + GH +V +++++ G
Sbjct: 359 --NCNAICLSIDGLTVFSGHMDGNLRLWDIQT----GKLLSEVAGHSSAVTSVSLSRNGN 412
Query: 232 LLVSGGTEKVVRVWDPRS 249
+++ G + V V+D R+
Sbjct: 413 RILTSGRDNVHNVFDTRT 430
Score = 43.9 bits (102), Expect = 9e-05
Identities = 52/260 (20%), Positives = 108/260 (41%), Gaps = 42/260 (16%)
Query: 26 LNDSDDTKHCAGINCLAVLKSAVSDGSDYLFTGSRDGRLKRWALGED-------AATCSA 78
LN+++D LA LK+ +G + L DG ++R G D +TC+
Sbjct: 173 LNEANDLYE----EMLAKLKA---NGLETLARQQVDGIVRRNEDGTDHFVESTIPSTCAN 225
Query: 79 TFESHVDWVNDAVLVGDS-TLVSCSSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEK 137
+H V +S TL + D +K WD ++GT ++L + +A +
Sbjct: 226 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDT-NSGTLIKSLYGSLGNILDMAVTHD 284
Query: 138 NSNIVASGGLGGEVFVWDLEAA--------HASAAKCIDATDDDTSNGINGS-GNSLPLT 188
N +++A+ +FVWD+ + H +D + + + ++ + ++ L
Sbjct: 285 NKSVIAATS-SNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 189 SLRSISSSNSISVHTTQNQGYIPIAAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPR 248
L +N++ + N A+ ++ G + SG + +R+WD +
Sbjct: 344 DLHKGYCTNTVLFTSNCN----------------AICLSIDGLTVFSGHMDGNLRLWDIQ 387
Query: 249 SGSKTMKLKGHTDNIRALLL 268
+G ++ GH+ + ++ L
Sbjct: 388 TGKLLSEVAGHSSAVTSVSL 407
>At1g49040 hypothetical protein; similar to EST emb|Z26090.1
Length = 1264
Score = 52.4 bits (124), Expect = 3e-07
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 92 LVGDST----LVSCSSDTTLKTWDAFSTGTCTR-TLRQHSDYVTCLAASEKNSNIVASGG 146
LVGD +S S+D +K WD G+ R TL+ H+ V +++ + SG
Sbjct: 937 LVGDREDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGK---IVSGS 993
Query: 147 LGGEVFVWDLEAA--------HASAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNS 198
V VWD + H S C+ L+ R +++++
Sbjct: 994 DDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-----------------LSGERVLTAAHD 1036
Query: 199 ISVHTTQNQGYIPIAAKGHKES-VYALAMNEGGTLLVSGGTEKVVRVWDPRSGSKTMKLK 257
+V + + +A G S + +L ++ +L + G + V +WD RSG + KLK
Sbjct: 1037 GTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLK 1096
Query: 258 GHTDNIRAL 266
GHT IR++
Sbjct: 1097 GHTKWIRSI 1105
Score = 40.0 bits (92), Expect = 0.001
Identities = 49/212 (23%), Positives = 80/212 (37%), Gaps = 18/212 (8%)
Query: 42 AVLKSAVSDGSDYLFTGSRDGRLKRWALGEDAATCSATFESHVDWVNDAVLVGDSTLVSC 101
A+L D + L RD W + + H W+ +V D TL++
Sbjct: 1059 AILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHK--LKGHTKWIRSIRMVED-TLITG 1115
Query: 102 SSDTTLKTWDAFSTGTCTRTLRQHSDYVTCLAASEKNSNIVASGGLGGEVFVWDLEAAHA 161
S D T + W S G+C L H+ V + S + I+ +G G + W+ +
Sbjct: 1116 SDDWTARVWSV-SRGSCDAVLACHAGPVQSVEYSPFDKGII-TGSADGLLRFWENDEGGI 1173
Query: 162 SAAKCIDATDDDTSNGINGSGNSLPLTSLRSISSSNSISV-HTTQNQG------YIPIAA 214
K I + IN N L + + + NS+S+ H N G +
Sbjct: 1174 KCVKNITLHSSSILS-INAGENWLGIGA-----ADNSMSLFHRPSNAGTKVSGWQLYRVP 1227
Query: 215 KGHKESVYALAMNEGGTLLVSGGTEKVVRVWD 246
+ V +A + + SGG V+R+WD
Sbjct: 1228 QRTAAVVRCVASDLERKRICSGGRNGVLRLWD 1259
Score = 36.6 bits (83), Expect = 0.015
Identities = 17/44 (38%), Positives = 24/44 (53%), Gaps = 2/44 (4%)
Query: 228 EGGTLLVSGGTEKVVRVWDP--RSGSKTMKLKGHTDNIRALLLD 269
E +SG T+ +V++WDP R LKGHT +RA+ D
Sbjct: 942 EDAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAISSD 985
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.312 0.127 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,396,244
Number of Sequences: 26719
Number of extensions: 267642
Number of successful extensions: 1366
Number of sequences better than 10.0: 192
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 615
Number of HSP's gapped (non-prelim): 630
length of query: 271
length of database: 11,318,596
effective HSP length: 98
effective length of query: 173
effective length of database: 8,700,134
effective search space: 1505123182
effective search space used: 1505123182
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0062.9