BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0051b.2
(276 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g01280 putative porin 422 e-119
At5g15090 voltage-dependent anion-selective channel protein hsr2 394 e-110
At5g67500 porin-like protein 288 2e-78
At5g57490 porin-like protein 263 1e-70
At3g49920 porin - like protein 183 8e-47
At5g37610 porin -like protein 92 3e-19
At1g52130 34 0.075
At3g20000 membrane import protein like 31 0.63
At1g33790 myrosinase binding protein, putative 31 0.83
At2g31370 bZIP transcription factor PosF21 / AtbZip59 30 1.1
At5g28520 myrosinase - binding protein - like 30 1.8
At5g12990 putative protein 29 2.4
At1g64790 hypothetical protein 29 2.4
At5g41980 unknown protein 29 3.1
At5g35940 putative protein 28 4.1
At3g03440 unknown protein 28 4.1
At3g29520 hypothetical protein 28 5.4
At5g50210 unknown protein 28 7.0
At4g26190 putative protein 28 7.0
At3g12880 unknown protein 28 7.0
>At3g01280 putative porin
Length = 276
Score = 422 bits (1086), Expect = e-119
Identities = 206/276 (74%), Positives = 246/276 (88%)
Query: 1 MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
M KGPGLYT+IGKKARDLL+KD++SDQKF+ITTFSP GVAITS+GTKKG+L + DV Q
Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQS 60
Query: 61 KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
+ KNITTD+KV TDS T V++ APGL++IFSFKVPDQ SGKVELQYLH+YAGIS+S
Sbjct: 61 RRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTS 120
Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
+GLT NP VNFSGVIG+NVLA+G D++FDTK G TK NAGLSFTK+DLIA+LT+NDKGD
Sbjct: 121 MGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGD 180
Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
LNASYYH+V+PL NTAVGAEV+H+ S+ ++T+T+GTQH+LDPLT++KARVN+ G ASAL
Sbjct: 181 LLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASAL 240
Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
IQHEW+PKSFFTISGEVDTK+I+KSAKVGLALALKP
Sbjct: 241 IQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 276
>At5g15090 voltage-dependent anion-selective channel protein hsr2
Length = 274
Score = 394 bits (1013), Expect = e-110
Identities = 188/276 (68%), Positives = 230/276 (83%), Gaps = 2/276 (0%)
Query: 1 MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
M KGPGLYT+IGKKARDLL++DY DQKF++TT+S TGVAIT++GT KG LF+ DV TQ+
Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60
Query: 61 KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
KN N T D+KV TDS+L TT+ ++PAPGLK I K+PD +SGK E+QY HDYAGIS+S
Sbjct: 61 KNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTS 120
Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
+G TA PIVNFSGV+GTN L+LG D+ ++T+ G NAG +FTKDDL A+L LNDKG+
Sbjct: 121 VGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGE 180
Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
LNASYY +VSP +T VGAE++H F+T EN +T+GTQHALDPLTT+KARVNN G A+AL
Sbjct: 181 KLNASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANAL 238
Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
IQHEWRPKSFFT+SGEVD+KAI+KSAKVG+ALALKP
Sbjct: 239 IQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274
>At5g67500 porin-like protein
Length = 276
Score = 288 bits (737), Expect = 2e-78
Identities = 140/276 (50%), Positives = 195/276 (69%)
Query: 1 MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
M+KGPGL+TDIGKKA+DLL +DY+SDQKF+I+T+S +GVA+TS+ KKG + ADV TQ
Sbjct: 1 MSKGPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVALTSTALKKGGVHAADVATQY 60
Query: 61 KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
K KN D+K+DTDS++ TT+ + + P KAI SFKVPD S K+E+QY HD+A ++++
Sbjct: 61 KYKNALFDVKIDTDSSVLTTVTLTEILPSTKAIASFKVPDYNSAKLEVQYFHDHATVTAA 120
Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
L NP+++ + +G+ V++ GA+ +DT TK NAG+S TK D ++ L DKGD
Sbjct: 121 AALKQNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKGD 180
Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
+L ASY H TA EV +FSTNENT+T+G +A+D T +KA++NN G AL
Sbjct: 181 SLKASYLHHFDEFKRTAAVGEVYRKFSTNENTITVGGLYAIDHSTAVKAKLNNHGTLGAL 240
Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
+QHE P+S T+S E+DTKA+EK + GL+LALKP
Sbjct: 241 LQHEVLPRSLVTVSSEIDTKALEKHPRFGLSLALKP 276
>At5g57490 porin-like protein
Length = 274
Score = 263 bits (671), Expect = 1e-70
Identities = 126/276 (45%), Positives = 181/276 (64%), Gaps = 2/276 (0%)
Query: 1 MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
M P + DIGKKA+DLL KDY D KFT+T S TG ++G KK + F D++T
Sbjct: 1 MGSSPAPFADIGKKAKDLLNKDYIFDHKFTLTMLSATGTEFVATGLKKDDFFFGDISTLY 60
Query: 61 KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
K +N D+K+D+ S++ T + + + P KA+ SFK+PD +SGK+++QY+H +A ++SS
Sbjct: 61 KGQNTIVDLKIDSHSSVSTKVTLKNLLPSAKAVISFKIPDHKSGKLDVQYVHPHATLNSS 120
Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
IGL P+++ S IG+ + LG +++FDT LTK NAG+ F + AAL L DKG+
Sbjct: 121 IGLNPTPLLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGIGFNNQGVSAALILEDKGE 180
Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
+L A+Y H V+P T+ GAE+ RFS N+ T+G+ H++D T +K R +N GKA +
Sbjct: 181 SLRATYVHTVNP--TTSFGAELIRRFSNYNNSFTVGSSHSVDQFTVVKTRFSNSGKAGMV 238
Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
+Q EWRPKS T S E D+KA+ S K+GLALALKP
Sbjct: 239 VQREWRPKSHITFSAEYDSKAVTSSPKLGLALALKP 274
>At3g49920 porin - like protein
Length = 226
Score = 183 bits (465), Expect = 8e-47
Identities = 110/276 (39%), Positives = 153/276 (54%), Gaps = 50/276 (18%)
Query: 1 MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
M+KGPGL+ DIGK A+DLL +DY +DQKF+I+T S +GVA+TS+ K G L A+V TQ
Sbjct: 1 MSKGPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQY 60
Query: 61 KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
K +N D+K+DTD N+ S
Sbjct: 61 KYRNTFFDVKIDTDFNV-----------------------------------------KS 79
Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
+ N V+ I N L +DT TK N G+S TK D ++ L DKGD
Sbjct: 80 LVYPMNKFVS----IDHNTLT-----GYDTTSRTFTKYNVGVSVTKPDQCVSIILGDKGD 130
Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
++ ASY + + T +A EV + STNE T+T+G +A+D LT +KA++N+ GK AL
Sbjct: 131 SIKASYVYYLDESTRSATVGEVIRKISTNETTVTVGGLYAVDHLTNVKAKLNSNGKFGAL 190
Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
+QHE PKS TISGE+DTK ++K ++GL+L+LKP
Sbjct: 191 LQHEGLPKSIVTISGEIDTKTLDKYPRLGLSLSLKP 226
>At5g37610 porin -like protein
Length = 163
Score = 92.0 bits (227), Expect = 3e-19
Identities = 59/166 (35%), Positives = 83/166 (49%), Gaps = 6/166 (3%)
Query: 111 LHDYAGISSSIGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLI 170
L + A IS+ +GL ANPI++FS V G + G +LT D +TK+N LS +D
Sbjct: 2 LSERARISTIVGLFANPILSFSAVFGNDFWRFGFELTLDLVNRIITKANTVLSLITEDTT 61
Query: 171 AALTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHAL--DPLTTLK 228
+++ K ASYY + + T GAE + S N+ ++G +H D L
Sbjct: 62 TTFSIDKKASLFTASYYQRLH--SKTVCGAEAKYILSDKSNSFSIGKRHLFGDDDLIQAL 119
Query: 229 ARVNNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLALAL 274
V+N G L QH W KSFFTI+GE S + GLA+ L
Sbjct: 120 LSVSNGGSMRVLFQHHWTLKSFFTIAGE--RLLNHSSQRFGLAVEL 163
>At1g52130
Length = 483
Score = 34.3 bits (77), Expect = 0.075
Identities = 22/63 (34%), Positives = 30/63 (46%), Gaps = 3/63 (4%)
Query: 85 DPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIGLTANPIVNFSGVIGTNVLALGA 144
D A G+ FK + S EL +D + +IG T N I+ F G G N+ +LGA
Sbjct: 235 DDASGVIQALQFKTNMKTS---ELMGYYDDDAVKFTIGCTVNKIIGFHGHAGKNLYSLGA 291
Query: 145 DLT 147
T
Sbjct: 292 YFT 294
Score = 28.1 bits (61), Expect = 5.4
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 112 HDYAGISSSIGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAG 161
++Y+G ++ + I+ F G N+ ALGA +T+ T K G
Sbjct: 111 YEYSGHKFTLAMEGKKIIGFHGFADVNLRALGAYVTWITPARMEAKGGKG 160
>At3g20000 membrane import protein like
Length = 309
Score = 31.2 bits (69), Expect = 0.63
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 137 TNVLALGADLTFDTKIGELTKSNAGLS--FTKDDLIAALTLNDKGDALNASYYHVVSPLT 194
TN L+LG ++ + G KS G + + D ++A+ + G A+ +Y +S
Sbjct: 178 TNHLSLGGEIFW---AGVPRKSGIGYAARYETDKMVASGQVASTG-AVVMNYVQKISDKV 233
Query: 195 NTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQHEWRPKSFFTIS 254
+ A + + + + + T ++G + L ++ ++++ G ASAL++ F +S
Sbjct: 234 SLAT--DFMYNYFSRDVTASVGYDYMLRQ-ARVRGKIDSNGVASALLEERLSMGLNFLLS 290
Query: 255 GEVDTKAIEKSAKVGLALAL 274
E+D K +K K G L +
Sbjct: 291 AELDHK--KKDYKFGFGLTV 308
>At1g33790 myrosinase binding protein, putative
Length = 745
Score = 30.8 bits (68), Expect = 0.83
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 60 LKNKNITTDIKVDTDSNLFTTI-AVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGIS 118
L K T ++D S ++ D + G+ FK + S + +D G+
Sbjct: 63 LSRKGFTQTFEIDPTSEYIVSVEGYYDESKGIIQALKFKTNKKTSDMIG----YDENGLK 118
Query: 119 SSIGLTANPIVNFSGVIGTNVLALGA 144
S+ + I+ F G TN+ +LGA
Sbjct: 119 FSLEVKGKAIIGFHGFADTNLNSLGA 144
>At2g31370 bZIP transcription factor PosF21 / AtbZip59
Length = 398
Score = 30.4 bits (67), Expect = 1.1
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 17/103 (16%)
Query: 137 TNVLALGADLTFDTKIGELTKSNAGLSF---TKDDLIAALTLNDKGDALNASYYHVVSPL 193
+ +L L DL+FD+ +G + + G SF T++DL++ DK + S
Sbjct: 63 SEILTLPDDLSFDSDLGVVGNAADGASFSDETEEDLLSMYLDMDKFN----------SSA 112
Query: 194 TNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGK 236
T++A E + NE + GT +P T VN+ G+
Sbjct: 113 TSSAQVGEPSGTAWKNETMMQTGTGSTSNPQNT----VNSLGE 151
>At5g28520 myrosinase - binding protein - like
Length = 453
Score = 29.6 bits (65), Expect = 1.8
Identities = 22/80 (27%), Positives = 33/80 (40%), Gaps = 4/80 (5%)
Query: 74 DSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSSIGLTANPIVNFSG 133
D +L + D G+ FK + S + +D GI S+ + I+ F G
Sbjct: 72 DEHLVSVEGYYDVTKGVIQALKFKTNKKTSEMIG----YDDTGIKLSLEVKGKKIIGFHG 127
Query: 134 VIGTNVLALGADLTFDTKIG 153
TN+ +LGA T IG
Sbjct: 128 YAETNLNSLGAYFTTTGPIG 147
>At5g12990 putative protein
Length = 80
Score = 29.3 bits (64), Expect = 2.4
Identities = 13/32 (40%), Positives = 20/32 (61%)
Query: 237 ASALIQHEWRPKSFFTISGEVDTKAIEKSAKV 268
+S+L+ H KSFF + DTKA++K K+
Sbjct: 20 SSSLLAHSSSTKSFFWLGETQDTKAMKKEKKI 51
>At1g64790 hypothetical protein
Length = 2428
Score = 29.3 bits (64), Expect = 2.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 35 SPTGVAITSSGTKKGELFVADVNTQLKNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAI 93
S +G TSS + +F D+ L+N ++T+DI +F T+A+ D KA+
Sbjct: 10 SISGSVSTSSTLIRLRIFRHDIPEILQNSDMTSDIAPVIVDMIFQTLAIYDDRASRKAV 68
>At5g41980 unknown protein
Length = 374
Score = 28.9 bits (63), Expect = 3.1
Identities = 32/123 (26%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 96 FKVPDQRSGKVELQ--YLHDYAGISSSIGLTA-------NPIVNFSGVIGTNVLALGADL 146
F P+ S +E Y D G+ S + P N +G++ NVLA +
Sbjct: 123 FFQPNSNSDTLENDDPYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASS-- 180
Query: 147 TFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRF 206
FD + + G + + L AALT +K YY V + N H
Sbjct: 181 -FDLRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV 239
Query: 207 STN 209
STN
Sbjct: 240 STN 242
>At5g35940 putative protein
Length = 444
Score = 28.5 bits (62), Expect = 4.1
Identities = 18/51 (35%), Positives = 23/51 (44%), Gaps = 2/51 (3%)
Query: 116 GISSSIGLTANPIVNFSGVIGTNVLALGADL--TFDTKIGELTKSNAGLSF 164
G S+G+ N I+ F G NV +LGA TK G N G S+
Sbjct: 111 GTKFSLGIIRNKIIGFHGFSDKNVYSLGAYFIKVLATKSGMQGGQNTGKSY 161
>At3g03440 unknown protein
Length = 408
Score = 28.5 bits (62), Expect = 4.1
Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
Query: 68 DIKVDTDSNLFTTIAVNDPAPGLKAI-FSFKVPDQRSGKVELQYLHDYAGISSSIGLTAN 126
D+ +T+S + T + + + + +I S R G V+ + LH +SSS+ ++++
Sbjct: 2 DLAGETNSLISTVASSSSCSSSVSSIDTSLDCDSPRGGDVDHELLHTAVSVSSSVSVSSS 61
Query: 127 PIVNFSGVIGTNVLALGAD--LTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGDALNA 184
+ V+ + + D L +I LTK++ + L + D+ +
Sbjct: 62 SSASIQRVLSL-IRSEDCDSRLFAAKEIRRLTKTSHRCRRHFSQAVEPLVSMLRFDSPES 120
Query: 185 SYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQHE 244
+ + L N AV E +N +++ AL+P+ NF ++++ E
Sbjct: 121 HHEAALLALLNLAVKDE--------KNKVSIIEAGALEPII-------NFLQSNSPTLQE 165
Query: 245 WRPKSFFTISGEVDTKAI 262
+ S T+S + K I
Sbjct: 166 YASASLLTLSASANNKPI 183
>At3g29520 hypothetical protein
Length = 211
Score = 28.1 bits (61), Expect = 5.4
Identities = 20/77 (25%), Positives = 34/77 (43%), Gaps = 14/77 (18%)
Query: 148 FDTKIGELTKSNAGLSFTKDDL----IAALTLNDKGD----------ALNASYYHVVSPL 193
FD + + + + TK D+ +A L+DK D + SY ++S
Sbjct: 54 FDMLVSSVKDDDKKKNVTKIDVKGFPMAYARLDDKSDRFLVCARYLSTVQPSYEQIMSKR 113
Query: 194 TNTAVGAEVTHRFSTNE 210
+ +G +V H FSTN+
Sbjct: 114 EDLEIGRDVMHLFSTNK 130
>At5g50210 unknown protein
Length = 718
Score = 27.7 bits (60), Expect = 7.0
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 198 VGAEVTHRFS-----TNENTLTLGTQHALDPLTTLKARVNNFGKASALIQH 243
+GA + F TNE + +H+LD + +L R++ F + + ++ H
Sbjct: 438 MGANIVKLFQQMTLMTNEEIANIHPKHSLDSIKSLLPRLHYFQEGTCIVHH 488
>At4g26190 putative protein
Length = 1067
Score = 27.7 bits (60), Expect = 7.0
Identities = 33/118 (27%), Positives = 51/118 (42%), Gaps = 16/118 (13%)
Query: 43 SSGTKKGELFVADV--NTQLKNKNITTDIKVDTDSNLFTTIA-VNDPAPGLKAIFSFKVP 99
S T K E VA V ++ LK+K+ T + K TD N+ T+A DP K
Sbjct: 377 SKSTTKEEKSVASVVISSCLKSKDDTVEQKECTDVNISETVAQTQDP----------KAK 426
Query: 100 DQRSGKVELQYLHDYAGISSSIGLTANP---IVNFSGVIGTNVLALGADLTFDTKIGE 154
++ K E + D G + S + + P + N G G +++ A T + GE
Sbjct: 427 RRKKRKTETIEVCDPLGNTLSTSMKSGPVERVENNDGNGGRELISYSASQTENYVNGE 484
>At3g12880 unknown protein
Length = 179
Score = 27.7 bits (60), Expect = 7.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 203 THRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASALIQHEWRPKSFFTISGEVDTKAI 262
+H +N TLG+QH +P T A + G + +H I+G+ D A
Sbjct: 73 SHLLVLTKNASTLGSQHYQNPNTA--AALKQCGLGFSTAKHGVGEADTQLITGDYDKAAY 130
Query: 263 EKSAKV 268
+ S KV
Sbjct: 131 DVSVKV 136
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.314 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,631,958
Number of Sequences: 26719
Number of extensions: 226426
Number of successful extensions: 448
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 25
length of query: 276
length of database: 11,318,596
effective HSP length: 98
effective length of query: 178
effective length of database: 8,700,134
effective search space: 1548623852
effective search space used: 1548623852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Lotus: description of TM0051b.2