BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0044b.3
(242 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g24260 floral homeotic protein, AGL9 357 2e-99
At5g15800 transcription factor (AGL2) 299 8e-82
At3g02310 floral homeotic protein AGL4 298 2e-81
At2g03710 MADS-box protein (AGL3) 228 2e-60
At2g45650 MADS-box protein (AGL6) 200 5e-52
At1g26310 cauliflower (CAL) 186 1e-47
At1g69120 unknown protein 186 1e-47
At5g60910 floral homeotic protein AGL8 181 2e-46
At3g61120 MADS-box protein AGL13 179 9e-46
At3g58780 shatterproof 1 (SHP1)/ agamous -like 1 (AGL1) 167 4e-42
At4g18960 floral homeotic protein agamous 166 1e-41
At4g09960 MADS-box protein AGL11 162 1e-40
At2g42830 MADS box transcription factor (AGL5) 155 2e-38
At4g11880 MADS-box protein AGL14 153 9e-38
At2g45660 MADS-box protein (AGL20) 148 2e-36
At5g62165 unknown protein 145 2e-35
At2g14210 pseudogene 145 2e-35
At4g22950 putative MADS Box / AGL protein 144 3e-35
At1g71692 MADS-box protein AGL12 140 6e-34
At4g37940 MADS-box protein AGL17 -like protein 137 7e-33
>At1g24260 floral homeotic protein, AGL9
Length = 251
Score = 357 bits (917), Expect = 2e-99
Identities = 193/248 (77%), Positives = 213/248 (85%), Gaps = 9/248 (3%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREAL--ELSSQQEYLKLKARYEALQRSQRNLMGEDL 118
SSML+TLERYQKCNYGAPE NV +REAL ELSSQQEYLKLK RY+ALQR+QRNL+GEDL
Sbjct: 61 SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDL 120
Query: 119 GPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRL-EGYQ 177
GPL++KELESLERQLDSSLKQIR+ RTQFMLDQL+DLQ KE ML+E N++LR RL +GYQ
Sbjct: 121 GPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRLADGYQ 180
Query: 178 LNSLQLNPGVEDMG-YGR--HPAQTHGDAFYHPIECEPTLQIGYQPDPVSVVTAGPSMNN 234
+ LQLNP E++ YGR H Q H AF+ P+ECEP LQIGYQ + AGPS+ N
Sbjct: 181 M-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ-DGMGAGPSV-N 237
Query: 235 NYMAGWLP 242
NYM GWLP
Sbjct: 238 NYMLGWLP 245
>At5g15800 transcription factor (AGL2)
Length = 251
Score = 299 bits (766), Expect = 8e-82
Identities = 163/254 (64%), Positives = 190/254 (74%), Gaps = 17/254 (6%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
S+MLKTL+RYQKC+YG+ E N + LE +S +EYLKLK RYE LQR QRNL+GEDLGP
Sbjct: 61 SNMLKTLDRYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGP 119
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLE---GYQ 177
LNSKELE LERQLD SLKQ+RS +TQ+MLDQLSDLQ KE ML E NR+L +L+ G +
Sbjct: 120 LNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVR 179
Query: 178 LNSL----QLNPGVEDMGYGRHPAQTHGDAFYHPIECEPTLQIGYQPDPV------SVVT 227
+ + G +++ Y H AQ+ G Y P+EC PTLQ+GY +PV +
Sbjct: 180 SHHMGGGGGWEGGEQNVTYAHHQAQSQG--LYQPLECNPTLQMGYD-NPVCSEQITATTQ 236
Query: 228 AGPSMNNNYMAGWL 241
A N Y+ GW+
Sbjct: 237 AQAQQGNGYIPGWM 250
>At3g02310 floral homeotic protein AGL4
Length = 250
Score = 298 bits (762), Expect = 2e-81
Identities = 160/252 (63%), Positives = 189/252 (74%), Gaps = 14/252 (5%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCS+
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCST 60
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
S+MLKTLERYQKC+YG+ E N + LE +S +EYLKLK RYE LQR QRNL+GEDLGP
Sbjct: 61 SNMLKTLERYQKCSYGSIEVNNKPAKELE-NSYREYLKLKGRYENLQRQQRNLLGEDLGP 119
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEG----- 175
LNSKELE LERQLD SLKQ+R +TQ+MLDQLSDLQ KEH+L +ANR+L +LE
Sbjct: 120 LNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVR 179
Query: 176 -YQLNSLQLNPGVEDMGYGRHPAQTHGDAFYHPIECEPTLQIGYQ----PDPVSVVTAGP 230
+ + +++ YG HP Q H Y +EC+PTLQIGY + ++V G
Sbjct: 180 HHHIGGGWEGGDQQNIAYG-HP-QAHSQGLYQSLECDPTLQIGYSHPVCSEQMAVTVQGQ 237
Query: 231 S-MNNNYMAGWL 241
S N Y+ GW+
Sbjct: 238 SQQGNGYIPGWM 249
>At2g03710 MADS-box protein (AGL3)
Length = 257
Score = 228 bits (582), Expect = 2e-60
Identities = 133/270 (49%), Positives = 175/270 (64%), Gaps = 43/270 (15%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRG+VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAE+AL+IFSNRGKLYEFCSS
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 -SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLG 119
S M +T+++Y+K +Y + N S ++ + Q+YLKLK+R E LQ SQR+L+GE+L
Sbjct: 61 PSGMARTVDKYRKHSYATMDPNQSAKDLQD--KYQDYLKLKSRVEILQHSQRHLLGEELS 118
Query: 120 PLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEGYQ-- 177
++ ELE LERQ+D+SL+QIRST+ + MLDQLSDL+ KE ML E NR LR++LE
Sbjct: 119 EMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAA 178
Query: 178 -----------------------LNSLQLNPGVEDMGYGRHPAQTHGDAFYHPIECEPTL 214
++S Q NP +++ G F+ P++ L
Sbjct: 179 LTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAG------------FFKPLQGNVAL 226
Query: 215 QIG-YQPDPVSVV-TAGPSMN-NNYMAGWL 241
Q+ Y +P + +A S N N + GW+
Sbjct: 227 QMSHYNHNPANATNSATTSQNVNGFFPGWM 256
>At2g45650 MADS-box protein (AGL6)
Length = 252
Score = 200 bits (509), Expect = 5e-52
Identities = 119/254 (46%), Positives = 163/254 (63%), Gaps = 16/254 (6%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRGRVE+KRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS+RGKLYEF S
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF-GS 59
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
+ T+ERY +C Y +N E + S QE KLK++YE+L R+ RNL+GEDLG
Sbjct: 60 VGIESTIERYNRC-YNCSLSNNKPEETTQ-SWCQEVTKLKSKYESLVRTNRNLLGEDLGE 117
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRL--EGYQL 178
+ KEL++LERQL+++L R +TQ M++++ DL++KE L + N+ L+ + EG+
Sbjct: 118 MGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKFETEGHAF 177
Query: 179 NSLQ---LNPGVEDMGYGRHPAQTHGDAFYHPIEC--EPTLQIGYQP------DPVSVVT 227
+ Q N G + + + ++C EP LQIG+Q + SV
Sbjct: 178 KTFQDLWANSAASVAGDPNNSEFPVEPSHPNVLDCNTEPFLQIGFQQHYYVQGEGSSVSK 237
Query: 228 AGPSMNNNYMAGWL 241
+ + N++ GW+
Sbjct: 238 SNVAGETNFVQGWV 251
>At1g26310 cauliflower (CAL)
Length = 255
Score = 186 bits (472), Expect = 1e-47
Identities = 102/202 (50%), Positives = 143/202 (70%), Gaps = 16/202 (7%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTF+KRR GLLKKA E+SVLCDAEV+LI+FS++GKL+E+ S
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSE 60
Query: 61 SSMLKTLERYQKCNYG-----APEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMG 115
S M K LERY++ +Y AP+++V+ + + EY +LKA+ E L+R+QR+ +G
Sbjct: 61 SCMEKVLERYERYSYAERQLIAPDSHVNA----QTNWSMEYSRLKAKIELLERNQRHYLG 116
Query: 116 EDLGPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQR--- 172
E+L P++ K+L++LE+QL+++LK IRS + Q M + L+ LQRKE + E N L ++
Sbjct: 117 EELEPMSLKDLQNLEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKE 176
Query: 173 ----LEGYQLNSLQLNPGVEDM 190
L Q QLN V+D+
Sbjct: 177 RENILRTKQTQCEQLNRSVDDV 198
>At1g69120 unknown protein
Length = 256
Score = 186 bits (471), Expect = 1e-47
Identities = 94/179 (52%), Positives = 138/179 (76%), Gaps = 11/179 (6%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRGRV+LKRIENKINRQVTF+KRR GLLKKA+E+SVLCDAEVAL++FS++GKL+E+ +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60
Query: 61 SSMLKTLERYQKCNYG-----APEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMG 115
S M K LERY++ +Y APE++V+T ++ EY +LKA+ E L+R+QR+ +G
Sbjct: 61 SCMEKILERYERYSYAERQLIAPESDVNTNWSM------EYNRLKAKIELLERNQRHYLG 114
Query: 116 EDLGPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLE 174
EDL ++ KEL++LE+QLD++LK IR+ + Q M + +++LQ+KE + E N L ++++
Sbjct: 115 EDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIK 173
>At5g60910 floral homeotic protein AGL8
Length = 242
Score = 181 bits (460), Expect = 2e-46
Identities = 97/177 (54%), Positives = 132/177 (73%), Gaps = 7/177 (3%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 61 SSMLKTLERYQKCNYGAPE---ANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGED 117
S M + LERY + Y + +VS E L E+ KLKAR E L++++RN MGED
Sbjct: 61 SCMERILERYDRYLYSDKQLVGRDVSQSENWVL----EHAKLKARVEVLEKNKRNFMGED 116
Query: 118 LGPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLE 174
L L+ KEL+SLE QLD+++K IRS + Q M + +S LQ+K+ L + N SL ++++
Sbjct: 117 LDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIK 173
>At3g61120 MADS-box protein AGL13
Length = 244
Score = 179 bits (455), Expect = 9e-46
Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 11/190 (5%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRG+VE+KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LIIFS GKLYEF S+
Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEF-SN 59
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSS--QQEYLKLKARYEALQRSQRNLMGEDL 118
+ +T+ERY +C + N+ + LE + +QE KLK +YE+L R+ RNL+GEDL
Sbjct: 60 VGVGRTIERYYRC-----KDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDL 114
Query: 119 GPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEGYQL 178
++ KEL++LERQL+ +L R +TQ M++Q+ +L+RKE L + N L+ E +
Sbjct: 115 EGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDF 174
Query: 179 NSLQ---LNP 185
Q LNP
Sbjct: 175 KGFQDLLLNP 184
>At3g58780 shatterproof 1 (SHP1)/ agamous -like 1 (AGL1)
Length = 248
Score = 167 bits (424), Expect = 4e-42
Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 10/230 (4%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
+GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG+LYE+ ++
Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-AN 74
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
+S+ T+ERY+K A S EA QQE KL+ + +Q S R+++GE LG
Sbjct: 75 NSVRGTIERYKKACSDAVNP-PSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGS 133
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRL-EGYQLN 179
LN KEL++LE +L+ + ++RS + + ++ ++ +Q++E L N LR ++ EG +LN
Sbjct: 134 LNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLN 193
Query: 180 ------SLQLNPGVEDMGYGRHPAQTHGDAFYHPIE-CEPTLQIGYQPDP 222
S+ V + G H H + Y P+ EP Q Q P
Sbjct: 194 PDQQESSVIQGTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQDQP 243
>At4g18960 floral homeotic protein agamous
Length = 284
Score = 166 bits (419), Expect = 1e-41
Identities = 95/208 (45%), Positives = 137/208 (65%), Gaps = 10/208 (4%)
Query: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS 61
GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ S++
Sbjct: 50 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-SNN 108
Query: 62 SMLKTLERYQKCNYGAPEANVSTREALELSS---QQEYLKLKARYEALQRSQRNLMGEDL 118
S+ T+ERY+K A N +T E+++ QQE KL+ + ++Q S R LMGE +
Sbjct: 109 SVKGTIERYKK----AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETI 164
Query: 119 GPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEGYQL 178
G ++ KEL +LE +L+ S+ +IRS + + + ++ +Q++E L N+ LR ++ +
Sbjct: 165 GSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENER 224
Query: 179 N--SLQLNPGVEDMGYGRHPAQTHGDAF 204
N S+ L PG + P QT F
Sbjct: 225 NNPSISLMPGGSNYEQLMPPPQTQSQPF 252
>At4g09960 MADS-box protein AGL11
Length = 230
Score = 162 bits (411), Expect = 1e-40
Identities = 90/192 (46%), Positives = 132/192 (67%), Gaps = 7/192 (3%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS RG+LYE+ ++
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEY-AN 59
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELS-SQQEYLKLKARYEALQRSQRNLMGEDLG 119
+++ T+ERY+K + N ST + + + QQE KL+ + + +Q S RNLMG+ L
Sbjct: 60 NNIRSTIERYKKA--CSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLS 117
Query: 120 PLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQR---LEGY 176
L+ KEL+ +E +L+ ++ +IRS + + +L ++ + Q++E L N LR + +E Y
Sbjct: 118 SLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERY 177
Query: 177 QLNSLQLNPGVE 188
Q + Q+ G E
Sbjct: 178 QQHHHQMVSGSE 189
>At2g42830 MADS box transcription factor (AGL5)
Length = 246
Score = 155 bits (391), Expect = 2e-38
Identities = 83/173 (47%), Positives = 120/173 (68%), Gaps = 2/173 (1%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
+GRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVAL+IFS RG+LYE+ ++
Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEY-AN 74
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
+S+ T+ERY+K A T EA QQE KL+ + +Q R+++GE LG
Sbjct: 75 NSVRGTIERYKKACSDAVNPPTIT-EANTQYYQQEASKLRRQIRDIQNLNRHILGESLGS 133
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRL 173
LN KEL++LE +L+ + ++RS + + ++ ++ +Q++E L N LR ++
Sbjct: 134 LNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKI 186
>At4g11880 MADS-box protein AGL14
Length = 221
Score = 153 bits (386), Expect = 9e-38
Identities = 89/174 (51%), Positives = 114/174 (65%), Gaps = 2/174 (1%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
M RG+ E+KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVALIIFS RGKLYEF SS
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
SS+ KT+ERYQK + R S+ E L + E L+ S R +MGE L
Sbjct: 61 SSIPKTVERYQKRIQDL--GSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDA 118
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLE 174
+ +EL+ LE QLD SL +IR+ + Q + ++ L+ KE L N+ L ++ E
Sbjct: 119 SSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEKERNLIAENKMLMEKCE 172
>At2g45660 MADS-box protein (AGL20)
Length = 214
Score = 148 bits (374), Expect = 2e-36
Identities = 86/196 (43%), Positives = 128/196 (64%), Gaps = 9/196 (4%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
M RG+ ++KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEV+LIIFS +GKLYEF +S
Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEF-AS 59
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQ---EYLKLKARYEALQRSQRNLMGED 117
S+M T++RY + + VST+ E + Q E + + E L+ S+R L+GE
Sbjct: 60 SNMQDTIDRYLR----HTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEG 115
Query: 118 LGPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEGYQ 177
+G + +EL+ +E+QL+ S+K IR+ +TQ +Q+ L++KE L+ N L ++ ++
Sbjct: 116 IGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHE 175
Query: 178 LNSLQLNPGVEDMGYG 193
+ + N E G G
Sbjct: 176 -SEVWSNKNQESTGRG 190
>At5g62165 unknown protein
Length = 210
Score = 145 bits (366), Expect = 2e-35
Identities = 80/172 (46%), Positives = 115/172 (66%), Gaps = 2/172 (1%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
M RG++E+K+IEN +RQVTF+KRRNGLLKKAYELSVLCDA+++LIIFS RG+LYEF SS
Sbjct: 1 MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEF-SS 59
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
S M KT+ERY+K +N ++ L+ +QE + + E L+ +R L+G+ +
Sbjct: 60 SDMQKTIERYRKYTKDHETSNHDSQIHLQ-QLKQEASHMITKIELLEFHKRKLLGQGIAS 118
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQR 172
+ +EL+ ++ QL SL ++R + Q +QL L+ KE L E N L Q+
Sbjct: 119 CSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAKEKQLLEENVKLHQK 170
>At2g14210 pseudogene
Length = 234
Score = 145 bits (365), Expect = 2e-35
Identities = 87/232 (37%), Positives = 140/232 (59%), Gaps = 12/232 (5%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRG++ ++RI+N +RQVTF+KRR+GLLKKA ELS+LCDAEV +IIFS+ GKLY++ S+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSS-QQEYLKLKARYEALQRSQRNLMGEDLG 119
SSM +ERY + E + A E+ Q+E L+ + + LQ R L+GE+L
Sbjct: 61 SSMKTIIERYNRVK---EEQHQLLNHASEIKFWQREVASLQQQLQYLQECHRKLVGEELS 117
Query: 120 PLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEGYQLN 179
+N+ +L++LE QL +SLK +R + Q M +++ +L RK ++ + N L+ ++ +
Sbjct: 118 GMNANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKE 177
Query: 180 SLQLNPGVEDMGYGRHPAQTHGDAFYHPIECEPTLQIGYQPDPVSVVTAGPS 231
+++L V +GR A G++ PI T Y P + ++ P+
Sbjct: 178 NIKLQKKV----HGRTNA-IEGNSSVDPISNGTTT---YAPPQLQLIQLQPA 221
>At4g22950 putative MADS Box / AGL protein
Length = 219
Score = 144 bits (364), Expect = 3e-35
Identities = 83/175 (47%), Positives = 116/175 (65%), Gaps = 3/175 (1%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
M RG+ E+KRIEN +RQVTF+KRRNGLLKKA+ELSVLCDAEVAL+IFS R KLYEF SS
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEF-SS 59
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGP 120
SS+ T+ERYQ+ N R ++ E L + E L+ S+R L+GE +
Sbjct: 60 SSIAATIERYQR--RIKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGIDA 117
Query: 121 LNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEG 175
+ +EL+ LE QLD SL +IR+ + Q + +++ L+ +E L + N+ L+++ G
Sbjct: 118 CSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLKAEERNLVKENKDLKEKWLG 172
>At1g71692 MADS-box protein AGL12
Length = 211
Score = 140 bits (353), Expect = 6e-34
Identities = 79/198 (39%), Positives = 116/198 (57%), Gaps = 6/198 (3%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
M RG+++LKRIEN ++RQVTF KRR GLLKKA ELSVLCDAE+ ++IFS +GKL+E +
Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALE------LSSQQEYLKLKARYEALQRSQRNLM 114
+M +++Y KC G ++ +T A E L + E LK E LQ+ +
Sbjct: 61 GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMF 120
Query: 115 GEDLGPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLE 174
G G +N +EL LE+ L+ + QIRS + ML ++ L+ KE +L N+ L +++E
Sbjct: 121 GGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEKIE 180
Query: 175 GYQLNSLQLNPGVEDMGY 192
+ L N V + Y
Sbjct: 181 ENNNSILDANFAVMETNY 198
>At4g37940 MADS-box protein AGL17 -like protein
Length = 228
Score = 137 bits (344), Expect = 7e-33
Identities = 74/188 (39%), Positives = 120/188 (63%), Gaps = 13/188 (6%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
MGRG++ ++RI++ +RQVTF+KRR GL+KKA EL++LCDAEV LIIFS+ GKLY+F +S
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDF-AS 59
Query: 61 SSMLKTLERYQKCNYGAPEANVSTREALELSS-----QQEYLKLKARYEALQRSQRNLMG 115
SSM ++RY K + + ++ L +S Q+E L+ ALQ + R +MG
Sbjct: 60 SSMKSVIDRYNK-------SKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMG 112
Query: 116 EDLGPLNSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHMLSEANRSLRQRLEG 175
E L L+ EL SLE Q++ SL+ IR + Q + ++ +L +K +++ + N L ++++
Sbjct: 113 EQLNGLSVNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQR 172
Query: 176 YQLNSLQL 183
+++L
Sbjct: 173 IHQENVEL 180
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.315 0.132 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,957,106
Number of Sequences: 26719
Number of extensions: 188061
Number of successful extensions: 778
Number of sequences better than 10.0: 137
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 627
Number of HSP's gapped (non-prelim): 141
length of query: 242
length of database: 11,318,596
effective HSP length: 96
effective length of query: 146
effective length of database: 8,753,572
effective search space: 1278021512
effective search space used: 1278021512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0044b.3