BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0044b.1
         (221 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g04630 unknown protein                                              29  2.2
At5g28646 putative protein                                             28  5.0
At2g42140 putative protein                                             28  5.0
At5g01840 putative protein                                             27  6.5
At5g14130 peroxidase ATP20a (emb|CAA67338.1)                           27  8.5
At3g19670 unknown protein                                              27  8.5

>At3g04630 unknown protein
          Length = 287

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 36/127 (28%), Positives = 51/127 (39%), Gaps = 14/127 (11%)

Query: 73  MNQRRKHNGDPANTATPQPSGVAATPIATFYCQPPKILPETQVRYATRP----IMLWFLS 128
           + QR+K   + A     +     A P+  FY + P   PE +    TRP    ++L    
Sbjct: 159 LEQRQKDEQEAALKQLRKNLKFKAKPVPNFYYEAPPAKPELKKLPLTRPKSPKLILSRRK 218

Query: 129 LFVDASVSQ-----LEGVCSENTHFKGARDTHLKDMPRTKNLNL---PPANRSSHG-SRI 179
            F DA  S      L+ V + N H  G    +  D  R KN N     P  RS  G S +
Sbjct: 219 SFSDAVSSSSREEILKTVSNRNRHSTGTVQ-NKDDDHRNKNTNAAHDSPRVRSGKGKSGL 277

Query: 180 PPRHRAS 186
            P + +S
Sbjct: 278 KPVNESS 284


>At5g28646 putative protein
          Length = 293

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 18/76 (23%), Positives = 30/76 (38%)

Query: 46  CSEFNIFLCTRSSILKERSLRIHVIYRMNQRRKHNGDPANTATPQPSGVAATPIATFYCQ 105
           CS  +     +S +    + R     R  +R++   + A     +     A P+  FY Q
Sbjct: 68  CSVASSMKNAKSKVTHGTAPRFRSAQRAEKRKEEEQEAAIKQLRKNLKFKANPVPDFYYQ 127

Query: 106 PPKILPETQVRYATRP 121
            P + PE +    TRP
Sbjct: 128 RPPVKPELKKFPLTRP 143


>At2g42140 putative protein
          Length = 172

 Score = 27.7 bits (60), Expect = 5.0
 Identities = 14/44 (31%), Positives = 20/44 (44%), Gaps = 2/44 (4%)

Query: 150 GARDTHLKDMPRTKNLNLPPANRSSHGSRIPPRHRASPTHSQCV 193
           G +D H  D+P  K L   P +R SH       H  + +H  C+
Sbjct: 60  GKQDHHHHDLPHQKGLKRNPRSRRSHDHH--EVHDMNKSHGFCI 101


>At5g01840 putative protein
          Length = 270

 Score = 27.3 bits (59), Expect = 6.5
 Identities = 19/60 (31%), Positives = 26/60 (42%), Gaps = 2/60 (3%)

Query: 125 WFLSLFVDASVSQLEGVCSENTHFKGARDTHLKDMPR-TKNLNLPPANRSSHGSRIPPRH 183
           WF  L  D S S+ + + S+       +  H    P  T  L+  P  R SH S+ PP H
Sbjct: 17  WFYKLR-DMSKSKKKNLQSQPNSTTSKKKHHAVPTPTSTTPLSPRPPRRPSHSSKAPPSH 75


>At5g14130 peroxidase ATP20a (emb|CAA67338.1)
          Length = 330

 Score = 26.9 bits (58), Expect = 8.5
 Identities = 10/28 (35%), Positives = 18/28 (63%)

Query: 118 ATRPIMLWFLSLFVDASVSQLEGVCSEN 145
           A +P+M+WFL + + + V++     SEN
Sbjct: 8   AKKPMMMWFLGMLLFSMVAESNAQLSEN 35


>At3g19670 unknown protein
          Length = 960

 Score = 26.9 bits (58), Expect = 8.5
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 169 PANRSSHGSRIPPRHRASPTHSQC-----VFVWHSEHEVQTATVTQFKNAFKK 216
           P+  S  GSR+PP+      HSQ      +    +E  +   T  Q K AF K
Sbjct: 146 PSATSYEGSRVPPQVTGPSIHSQAQQRASIIHTSAESSIMNPTFEQPKAAFLK 198


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.323    0.135    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,181,809
Number of Sequences: 26719
Number of extensions: 215809
Number of successful extensions: 546
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 544
Number of HSP's gapped (non-prelim): 6
length of query: 221
length of database: 11,318,596
effective HSP length: 95
effective length of query: 126
effective length of database: 8,780,291
effective search space: 1106316666
effective search space used: 1106316666
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)