BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0042.10
(217 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73640 putative ras-related GTP-binding protein 274 3e-74
At1g18200 hypothetical protein 268 1e-72
At1g16920 unknown protein 241 2e-64
At5g45750 Rab-type small GTP-binding protein-like 236 7e-63
At4g18800 ras-like GTP-binding protein 233 6e-62
At5g60860 GTP-binding protein - like 232 1e-61
At4g18430 membrane-bound small GTP-binding - like protein 228 2e-60
At3g15060 ras-related GTP-binding protein 226 9e-60
At1g07410 small G protein, putative 225 2e-59
At1g09630 putative RAS-related protein, RAB11C 224 3e-59
At1g06400 unknown protein 224 3e-59
At1g28550 ras-related GTP-binding protein, putative 223 8e-59
At3g46830 GTP-binding protein Rab11 220 4e-58
At2g33870 putative GTP-binding protein 220 4e-58
At5g59150 GTP-binding protein rab11 - like 219 7e-58
At5g65270 GTP-binding protein 216 7e-57
At5g47960 RAS superfamily GTP-binding protein-like 214 2e-56
At4g39990 GTP-binding protein GB3 214 2e-56
At5g47520 GTP-binding protein-like 204 2e-53
At3g12160 hypothetical protein 204 3e-53
>At1g73640 putative ras-related GTP-binding protein
Length = 233
Score = 274 bits (700), Expect = 3e-74
Identities = 143/231 (61%), Positives = 175/231 (74%), Gaps = 16/231 (6%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M D ++EECDYLFK VLIGDS VGKSNLLSRF+KDEFR DSKPTIGVEFAY N+ V DK
Sbjct: 1 MAEDTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
+IKAQIWDTAGQERFRAITSSYYRGALGA+++YDITRR++++N++ WL ELR+F + V
Sbjct: 61 IIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
V+LVGNKSDL QSREVE++EGK AE+EGL F+ETSAL+N+NVEE FL MI +I ++ Q
Sbjct: 121 VVLVGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQ 180
Query: 181 R-SLEAKVDEKPINVFS----------GKEIHLVDEVTATK-----QATCC 215
R + E K + + GKEI + EVTAT+ + CC
Sbjct: 181 RIASENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231
>At1g18200 hypothetical protein
Length = 354
Score = 268 bits (686), Expect = 1e-72
Identities = 130/181 (71%), Positives = 155/181 (84%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M +++DEECDYLFK VLIGDS VGKSNLLSRF++DEFRLDSKPTIGV+FAY N++V DK
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
IKAQIWDTAGQERFRAITSSYYRGALGA+++YDITRR +++N+ WL ELR F + V
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
V+LVGNKSDLGQSREVE+EEGK AE+EGL F+ETSAL+N NVEE FL MI +I ++ Q
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 R 181
+
Sbjct: 181 K 181
>At1g16920 unknown protein
Length = 216
Score = 241 bits (615), Expect = 2e-64
Identities = 122/210 (58%), Positives = 161/210 (76%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA +KV K++KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TRR+++ENV WL EL+ ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V E+GK +AE E LCFMETSAL+ NVE+ F E++T+I IT ++ +EA
Sbjct: 127 KSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAG 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
D +V G++I + ++V+A K+ CCS
Sbjct: 187 EDGN-ASVPKGEKIEVKNDVSALKKLGCCS 215
>At5g45750 Rab-type small GTP-binding protein-like
Length = 216
Score = 236 bits (602), Expect = 7e-63
Identities = 122/210 (58%), Positives = 156/210 (74%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D+E DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA ++ V DK+IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR S++ENV WL ELR ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V+ E+ K FAE E L FMETSAL+ NVE F E++T+I I ++++EA
Sbjct: 127 KSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAA 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
+ + G +I + +V+A K+ CCS
Sbjct: 187 SESANV-PSKGDKIDIGKDVSAVKKGGCCS 215
>At4g18800 ras-like GTP-binding protein
Length = 214
Score = 233 bits (594), Expect = 6e-62
Identities = 119/210 (56%), Positives = 159/210 (75%), Gaps = 3/210 (1%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA ++ V +K+IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR S++ENV WL ELR+ ++VV+LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL V+ E+ K FAE E L FMETSAL++ NVE F E++T+I + ++++EA
Sbjct: 127 KSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAG 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
D + G++I + +V+A K+ CCS
Sbjct: 187 EDSGNV-PSKGEKIDV--DVSAVKKTGCCS 213
>At5g60860 GTP-binding protein - like
Length = 217
Score = 232 bits (592), Expect = 1e-61
Identities = 118/218 (54%), Positives = 161/218 (73%), Gaps = 4/218 (1%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M A D+E DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA +I V DK
Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
++KAQIWDTAGQER+RAITS+YYRGA+GA++VYD+TR ++ENV WL ELR+ ++V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
++ VGNK+DL R V E+ K FAE E FMETSAL+++NVE F E++++I + +
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 RSLEAKVDEKPINVFSGKEIHL--VDEVTATKQATCCS 216
++L+ + + P + G+ I++ D+V+A K+ CCS
Sbjct: 181 KALD--IGDDPAALPKGQTINVGSKDDVSAVKKVGCCS 216
>At4g18430 membrane-bound small GTP-binding - like protein
Length = 217
Score = 228 bits (581), Expect = 2e-60
Identities = 115/212 (54%), Positives = 158/212 (74%), Gaps = 4/212 (1%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D++ DYLFK VLIGDSGVGKSNLLSRF ++EF ++SK TIGVEFA ++ V +K+IKAQ+
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYDITR ++ENV WL ELR+ ++V++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
K+DL R V EE + F+E E + FMETSAL NVE+ F ++T+I + +++L+
Sbjct: 127 KADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGT 186
Query: 187 VDEKPINVFSGKEIHL--VDEVTATKQATCCS 216
D P+++ G+ I + D+VTA K + CCS
Sbjct: 187 GD--PMSLPKGQTIDIGNKDDVTAVKSSGCCS 216
>At3g15060 ras-related GTP-binding protein
Length = 217
Score = 226 bits (575), Expect = 9e-60
Identities = 113/217 (52%), Positives = 155/217 (71%)
Query: 1 MMADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDK 60
M A D++ D+L+K VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA +I V +K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 LIKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMV 120
++KAQIWDTAGQER+RAITS+YYRGA+GA++VYD+TR ++ENV WL ELR+ ++V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 VILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQ 180
++LVGNK+DL R V E+ K FAE E FMETSAL+ LNVE F E++++I + +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 RSLEAKVDEKPINVFSGKEIHLVDEVTATKQATCCST 217
++L+ D + + D+V+ K+ CCS+
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>At1g07410 small G protein, putative
Length = 214
Score = 225 bits (573), Expect = 2e-59
Identities = 117/217 (53%), Positives = 158/217 (71%), Gaps = 4/217 (1%)
Query: 2 MADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKL 61
MA+ D E DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA ++V K
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 62 IKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVV 121
+KAQIWDTAGQER+RAITS+YYRGA+GA++VYDIT+R ++ENV WL ELR+ ++V+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120
Query: 122 ILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQR 181
++ GNKSDL R V E+G+ AE EGL F+ETSAL+ N+E+ F ++++I I ++
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180
Query: 182 SLEAKVDEKPINV-FSGKEIHLVDEVTATKQATCCST 217
+L A+ E N+ G I++ D +AT + CCST
Sbjct: 181 ALAAQ--EAAGNLPGQGTAINISDS-SATNRKGCCST 214
>At1g09630 putative RAS-related protein, RAB11C
Length = 217
Score = 224 bits (571), Expect = 3e-59
Identities = 111/216 (51%), Positives = 155/216 (71%)
Query: 2 MADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKL 61
MA DEE DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA ++V +
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 62 IKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVV 121
+KAQIWDTAGQER+RAITS+YYRGALGA++VYD+T+ +++ENV WL ELR+ ++V+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 122 ILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQR 181
+L+GNK+DL R V E+ + +AE EGL F+ETSAL+ LNVE+ F +++++ I ++
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180
Query: 182 SLEAKVDEKPINVFSGKEIHLVDEVTATKQATCCST 217
S+ + N+ G+ I + + + CCS+
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216
>At1g06400 unknown protein
Length = 216
Score = 224 bits (571), Expect = 3e-59
Identities = 116/210 (55%), Positives = 150/210 (71%), Gaps = 1/210 (0%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
DEE DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA KV K++KAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA+++YD+TR +++EN WL ELR ++VV+L+GN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
K DL V+ EE K FAE E L FMETSAL NVE F E++T+I I +RS++
Sbjct: 127 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186
Query: 187 VDEKPINVFSGKEIHLVDEVTATKQATCCS 216
+ + G+ I++ ++ + K+ CCS
Sbjct: 187 GESADL-PGKGETINVKEDGSVLKRMGCCS 215
>At1g28550 ras-related GTP-binding protein, putative
Length = 218
Score = 223 bits (567), Expect = 8e-59
Identities = 112/212 (52%), Positives = 157/212 (73%), Gaps = 3/212 (1%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
+++ DYLFK VL GDSGVGKSNLLSRF +++F DS+ TIGVEFA +I+ DK++KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQER+RAITS+YYRGA+GA++VYD+TR ++ENV WL ELR+ ++V++LVGN
Sbjct: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGN 126
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
K+DL R + EE K FAE E FMETSAL+ +NV+ F E++T+I + +++LEA
Sbjct: 127 KADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAG 186
Query: 187 VDEKPINVFSGKEIHL--VDEVTATKQATCCS 216
D+ + G+ I++ D+++A K+ CCS
Sbjct: 187 -DDPTTALPKGQMINVGGRDDISAVKKPGCCS 217
>At3g46830 GTP-binding protein Rab11
Length = 217
Score = 220 bits (561), Expect = 4e-58
Identities = 112/217 (51%), Positives = 153/217 (69%), Gaps = 1/217 (0%)
Query: 2 MADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKL 61
M D+E DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA +V K
Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60
Query: 62 IKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVV 121
IKAQIWDTAGQER+RAITS+YYRGA+GA++VYDIT+R +++NV WL ELR+ ++V+
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 122 ILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQR 181
++ GNKSDL R V +E+G+ AE EGL F+ETSAL+ NVE+ F ++ +I I ++
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
Query: 182 SLEAKVDEKPINVFSGKEIHL-VDEVTATKQATCCST 217
+L A+ + G+ + VD+ + + CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217
>At2g33870 putative GTP-binding protein
Length = 219
Score = 220 bits (561), Expect = 4e-58
Identities = 114/214 (53%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSN-IKVRDKLIKAQ 65
+++ DYLFK VL GDSGVGKSNLLSRF +++F DS+ TIGVEFA I+V DK++KAQ
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIVKAQ 66
Query: 66 IWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVG 125
IWDTAGQER+RAITS+YYRGA+GA++VYD+TR ++ENV WL ELR+ + V++LVG
Sbjct: 67 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVG 126
Query: 126 NKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEA 185
NK+DL R + EE K FAE E FMETSAL+ +NVE F E++T+I + +++L+A
Sbjct: 127 NKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDA 186
Query: 186 KVDEKPINVFSGKEIHL--VDEVTATKQATCCST 217
D+ + G+ I++ D+V+A K++ CC+T
Sbjct: 187 G-DDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 219
>At5g59150 GTP-binding protein rab11 - like
Length = 217
Score = 219 bits (559), Expect = 7e-58
Identities = 109/217 (50%), Positives = 156/217 (71%), Gaps = 1/217 (0%)
Query: 2 MADAFDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKL 61
MA +++ DYLFK VLIGDSGVGK+N+LSRF ++EF L+SK TIGVEFA ++V K
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 62 IKAQIWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVV 121
+KAQIWDTAGQER+RAITS+YYRGA+GA++VYDIT+R +++NV WL ELR+ ++V+
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 122 ILVGNKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQR 181
++ GNK+DL R V +E+G+ AETEGL F+ETSAL+ NVE+ F ++ +I I ++
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
Query: 182 SLEAKVDEKPINVFSGKEIHL-VDEVTATKQATCCST 217
+L A+ + G+ + V++ + + CCST
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217
>At5g65270 GTP-binding protein
Length = 226
Score = 216 bits (550), Expect = 7e-57
Identities = 110/215 (51%), Positives = 152/215 (70%), Gaps = 5/215 (2%)
Query: 8 EECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQIW 67
++ DY+FK VLIGDS VGKS +L+R+A+DEF LDSK TIGVEF + + K +KAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 68 DTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGNK 127
DTAGQER+RA+TS+YYRGA+GAM+VYDITRR +++++ WL ELR +++V+IL+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNK 131
Query: 128 SDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAKV 187
SDL R + E+ K FAE EGL F+ETSA NVE F ++T+I +I ++SL A
Sbjct: 132 SDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASE 191
Query: 188 DEKPIN--VFSGKEIHLV---DEVTATKQATCCST 217
D++ N +GK+I +V +V K CC++
Sbjct: 192 DQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>At5g47960 RAS superfamily GTP-binding protein-like
Length = 223
Score = 214 bits (546), Expect = 2e-56
Identities = 109/215 (50%), Positives = 154/215 (70%), Gaps = 3/215 (1%)
Query: 6 FDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQ 65
F+++ DY+FK VLIGDS VGKS LL+RF+++EF ++SK TIGVEF +++ K IKAQ
Sbjct: 8 FNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQ 67
Query: 66 IWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVG 125
IWDTAGQER+RA+TS+YYRGA+GAM+VYDIT+R S+++V WL ELR +++V++L+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG 127
Query: 126 NKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEA 185
NK+DLG R V E+ K FA+ E L FMETSAL + NVE FL ++T+I I +++L A
Sbjct: 128 NKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVA 187
Query: 186 KVDEK---PINVFSGKEIHLVDEVTATKQATCCST 217
+ + ++ G +I + E T +K CC T
Sbjct: 188 NEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGT 222
>At4g39990 GTP-binding protein GB3
Length = 224
Score = 214 bits (546), Expect = 2e-56
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 4/210 (1%)
Query: 11 DYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQIWDTA 70
DY+FK VLIGDS VGKS LL+RFA+DEF +DSK TIGVEF + + K IKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGNKSDL 130
GQER+RA+TS+YYRGA+GAM+VYD+T+R ++E++ WL ELR +++V+IL+GNKSDL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 GQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAKVDEK 190
R V E+ K FAE EGL F+ETSAL NVE F ++T+I + +++L ++ D
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 191 PINVFSGKEIHLV---DEVTATKQATCCST 217
+GK+I + E+ A K +TCC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPA-KTSTCCTS 223
>At5g47520 GTP-binding protein-like
Length = 221
Score = 204 bits (520), Expect = 2e-53
Identities = 110/214 (51%), Positives = 147/214 (68%), Gaps = 3/214 (1%)
Query: 7 DEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQI 66
D+ DYLFK VLIGDS VGKSNLL+RFA+DEF +SK TIGVEF + + K IKAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 67 WDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVGN 126
WDTAGQERFRA+TS+YYRGA+GA++VYDI+RR ++ ++ WL EL ++V ILVGN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 127 KSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEAK 186
KSDL REV EGK AE +GL FMETSAL + NV F ++ +I +I ++ + ++
Sbjct: 128 KSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 187 VDEK--PINVFSGKEIHL-VDEVTATKQATCCST 217
K P ++ +GK++ + D K+ CCS+
Sbjct: 188 ELNKQDPASLSNGKKVVIPSDGQGEFKKGGCCSS 221
>At3g12160 hypothetical protein
Length = 220
Score = 204 bits (519), Expect = 3e-53
Identities = 105/212 (49%), Positives = 149/212 (69%), Gaps = 4/212 (1%)
Query: 6 FDEECDYLFKTVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYSNIKVRDKLIKAQ 65
++++ DY+FK VLIGDS VGK+ LL+RFA++EF +DSK TIGVEF + + +K +KAQ
Sbjct: 8 YNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQ 67
Query: 66 IWDTAGQERFRAITSSYYRGALGAMVVYDITRRSSYENVRNWLLELREFGGEDMVVILVG 125
IWDTAGQER A+TS+YYRGA+GAM+VYD+T+R S++++ WL ELR +++V++L+G
Sbjct: 68 IWDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIG 125
Query: 126 NKSDLGQSREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLEMITKILDITCQRSLEA 185
NK DLG R V E+ + FA+ E L FMETSAL+ NVE FL ++T+I I ++SL A
Sbjct: 126 NKCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTA 185
Query: 186 KVDEKPIN--VFSGKEIHLVDEVTATKQATCC 215
D+ N + G I + E + K+ CC
Sbjct: 186 DDDDADGNSSLLKGTRIIIPSEQESGKRGGCC 217
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.135 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,598,831
Number of Sequences: 26719
Number of extensions: 187800
Number of successful extensions: 743
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 589
Number of HSP's gapped (non-prelim): 117
length of query: 217
length of database: 11,318,596
effective HSP length: 95
effective length of query: 122
effective length of database: 8,780,291
effective search space: 1071195502
effective search space used: 1071195502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0042.10