BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0036c.5
         (55 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g51320 putative protein                                             27  2.5
At2g38900 protease inhibitor like protein                              25  7.4
At2g38870 protease inhibitor like protein                              25  7.4

>At5g51320 putative protein
          Length = 114

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)

Query: 5   DWAQLVGKNNDFVVIMIRSDYGTLNGK 31
           D+A L GK  DF V+ ++ D+  L GK
Sbjct: 87  DFAVLTGKR-DFAVLTVKRDFAVLTGK 112


>At2g38900 protease inhibitor like protein
          Length = 73

 Score = 25.0 bits (53), Expect = 7.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 6  WAQLVGKNNDFVVIMIRSDYGTLN 29
          W +L+G N D+   +I+ +  +LN
Sbjct: 14 WPELLGTNGDYAASVIKGENSSLN 37


>At2g38870 protease inhibitor like protein
          Length = 70

 Score = 25.0 bits (53), Expect = 7.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 6  WAQLVGKNNDFVVIMIRSDYGTLN 29
          W +L G N D+  ++I  +  T+N
Sbjct: 11 WPELTGTNGDYAAVVIERENPTVN 34


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.322    0.143    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,366,420
Number of Sequences: 26719
Number of extensions: 42907
Number of successful extensions: 71
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 3
length of query: 55
length of database: 11,318,596
effective HSP length: 31
effective length of query: 24
effective length of database: 10,490,307
effective search space: 251767368
effective search space used: 251767368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)