BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0034b.4
(217 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15320 hypothetical protein 61 5e-10
At1g36675 putative protein 59 3e-09
At1g42670 unknown protein 54 5e-08
At4g01980 hypothetical protein 52 2e-07
At5g28890 putative protein 51 4e-07
At2g16140 pseudogene; similar to MURA transposase of maize Muta... 50 9e-07
At5g41220 glutathione transferase-like 48 5e-06
At3g47680 unknown protein 48 5e-06
At2g22710 hypothetical protein 47 6e-06
At1g37080 hypothetical protein 46 1e-05
At1g34360 transcription factor like protein 45 2e-05
At5g32620 putative protein 44 9e-05
At3g01560 unknown protein 44 9e-05
At2g40820 hypothetical protein 44 9e-05
At5g28710 putative protein 42 3e-04
At2g15690 unknown protein 42 3e-04
At3g29640 hypothetical protein 39 0.003
At2g27380 hypothetical protein 39 0.003
At1g79480 hypothetical protein 39 0.003
At5g14540 unknown protein 37 0.006
>At3g15320 hypothetical protein
Length = 287
Score = 60.8 bits (146), Expect = 5e-10
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 127 EFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAPAWNTAQNMVLISGWINCGTSSVVGKNQ 186
E P FS+Q++ + +EV PK + W +++VL+S W+N V+G +Q
Sbjct: 10 EVPAFSSQLSEEGSDLEGSEDEVKPKQSISRKK-WTAKEDIVLVSAWLNTSKDPVIGNDQ 68
Query: 187 KGETFWRDIAEYCNEHCSFD--PPRDGIACRNR 217
+G++FW+ IA Y S D P R+ C++R
Sbjct: 69 QGQSFWKRIAAYVAASPSLDGLPKREHAKCKHR 101
>At1g36675 putative protein
Length = 268
Score = 58.5 bits (140), Expect = 3e-09
Identities = 35/90 (38%), Positives = 45/90 (49%), Gaps = 2/90 (2%)
Query: 87 SSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSVDGPEFPEFSTQVNLGDGSADNEV 146
SS + N P +GS+ PS S PM +V EFPEFSTQ+ LG S +E
Sbjct: 2 SSAITNHRPYHGSIMSPSSQAPSYSSTPMGNETNTNVGATEFPEFSTQMALGVMSGVHET 61
Query: 147 --NEVTPKSKKTHAPAWNTAQNMVLISGWI 174
NE + + W T QN+VL+S WI
Sbjct: 62 IPNEEDLTCNHSRSSKWTTDQNLVLLSRWI 91
>At1g42670 unknown protein
Length = 579
Score = 54.3 bits (129), Expect = 5e-08
Identities = 34/95 (35%), Positives = 45/95 (46%), Gaps = 6/95 (6%)
Query: 129 PEFSTQVNLGDGSADNE--VNEVTPKSKKTHAPA--WNTAQNMVLISGWINCGTSSVVGK 184
P +ST+ + D S D + K KK P W++ +++VLISGW+N VVG
Sbjct: 304 PVYSTEWSDDDPSEDELPIAGKKGKKGKKAKKPRRNWSSTEDVVLISGWLNTSKDPVVGN 363
Query: 185 NQKGETFWRDIAEYCNEHCSFD--PPRDGIACRNR 217
QKG FW IA Y N R I C+ R
Sbjct: 364 EQKGAAFWERIAVYYNSSPKLKGVEKRGHICCKQR 398
>At4g01980 hypothetical protein
Length = 302
Score = 52.0 bits (123), Expect = 2e-07
Identities = 36/121 (29%), Positives = 51/121 (41%), Gaps = 17/121 (14%)
Query: 108 QSSGYMPMVRANFPS---------VDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKKTHA 158
Q+SG+M ++ + S V E P F TQ + + + V KK
Sbjct: 9 QASGFMDLLHSQQESHNNETNQYEVGSSEIPVFGTQ-RCQESHEERYASRVAIARKK--- 64
Query: 159 PAWNTAQNMVLISGWINCGTSSVVGKNQKGETFWRDIAEYCNEHCSFD--PPRDGIACRN 216
W +++VLIS W+N VVG QK FW+ IA Y + D P R C+
Sbjct: 65 --WAAKEDIVLISAWLNTSKDPVVGNEQKAPAFWKRIASYVAANPDLDGVPKRASAQCKQ 122
Query: 217 R 217
R
Sbjct: 123 R 123
>At5g28890 putative protein
Length = 232
Score = 51.2 bits (121), Expect = 4e-07
Identities = 31/111 (27%), Positives = 50/111 (44%), Gaps = 12/111 (10%)
Query: 109 SSGYMPMVRANFPSVDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAPAWNTAQNMV 168
+SG+M ++++ S + P+ S + D N PK K W+ ++++
Sbjct: 5 TSGFMDLLQSQQESYNNENNPQLSDE----DHEDVNTPKVAIPKKK------WSAKEDVI 54
Query: 169 LISGWINCGTSSVVGKNQKGETFWRDIAEY--CNEHCSFDPPRDGIACRNR 217
LIS W+N VVG QK FW+ IA Y + P R+ C+ R
Sbjct: 55 LISAWLNTSKDPVVGNEQKAPAFWKRIATYVAASPDLVGFPKRESAQCKQR 105
>At2g16140 pseudogene; similar to MURA transposase of maize Mutator
transposon
Length = 311
Score = 50.1 bits (118), Expect = 9e-07
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 127 EFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAPAWNTAQNMVLISGWINCGTSSVVGKNQ 186
+ P FSTQ + + E PK K+ W+ ++MVL+S W+N +V+G Q
Sbjct: 32 DVPIFSTQC-----TDSPSLEEHVPKVKRERMK-WSAKEDMVLVSSWLNTSKDAVIGNEQ 85
Query: 187 KGETFWRDIAEY 198
K TFW IA Y
Sbjct: 86 KANTFWSRIAAY 97
>At5g41220 glutathione transferase-like
Length = 590
Score = 47.8 bits (112), Expect = 5e-06
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 130 EFSTQVNLGDGSADNEVNEVTPKSKKTHAPAWNTAQNMVLISGWINCGTSSVVGKNQKGE 189
+FST +G+ S D + + T +K H W+ A++ +LIS W+N +V K
Sbjct: 246 QFST---IGEKSDDPNLVQNTTDRRK-HRRKWSRAEDAILISAWLNTSKDPIVDNEHKAC 301
Query: 190 TFWRDIAEYCNEHCSFD--PPRDGIACRNR 217
FW+ I Y N S P R+ C+ R
Sbjct: 302 AFWKRIGAYFNNSASLANLPKREPSHCKQR 331
>At3g47680 unknown protein
Length = 302
Score = 47.8 bits (112), Expect = 5e-06
Identities = 20/49 (40%), Positives = 29/49 (58%), Gaps = 1/49 (2%)
Query: 150 TPKSKKTHAPAWNTAQNMVLISGWINCGTSSVVGKNQKGETFWRDIAEY 198
TPK K+ W+ +++VL+S W+N +V+G QKG FW IA Y
Sbjct: 40 TPKVKRERRK-WSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAY 87
>At2g22710 hypothetical protein
Length = 300
Score = 47.4 bits (111), Expect = 6e-06
Identities = 31/97 (31%), Positives = 39/97 (39%), Gaps = 8/97 (8%)
Query: 123 VDGPEFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAPAWNTAQNMVLISGWINCGTSSVV 182
V E P F TQ + + V KK W +++VLIS W+N VV
Sbjct: 31 VGSSEIPVFGTQ-RCQESHEKRYASRVAIARKK-----WAAKEDIVLISAWLNTSKDPVV 84
Query: 183 GKNQKGETFWRDIAEYCNEHCSFD--PPRDGIACRNR 217
G QK FW+ IA Y D P R C+ R
Sbjct: 85 GNEQKAPAFWKRIASYVAASPDLDGVPKRASAQCKQR 121
>At1g37080 hypothetical protein
Length = 224
Score = 46.2 bits (108), Expect = 1e-05
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 81 NQYSNQSSFVPNFHPSYGSVRYPSQTPQS-SGYMPMVRANFPSVDGPEFPEFSTQVNLGD 139
N + NQ++F+ + + P++ P + P ++ + EF F+TQ +
Sbjct: 2 NPFPNQANFIDLLTSQHET---PNRQPNPYETHSPSIK-----LGESEFLVFNTQWHESH 53
Query: 140 GSADNEVNEVTPKSKKTHAPAWNTAQNMVLISGWINCGTSSVVGKNQKGETFWRDIAEY 198
N T K T W + +++VLIS W+N SVVG Q+ + FW+ + Y
Sbjct: 54 LQGGN----TTTKRTTTTRNKWTSKEDIVLISTWLNTSKDSVVGNEQRADAFWKRVVVY 108
>At1g34360 transcription factor like protein
Length = 520
Score = 45.4 bits (106), Expect = 2e-05
Identities = 46/132 (34%), Positives = 54/132 (40%), Gaps = 22/132 (16%)
Query: 5 NHHYNTQNSSSYPISNQNPNNY-------EDPNQF-SYPRSQNPTNYQVPHQFSNQRPQN 56
N H N Q SNQ PN + PNQ S PR Q P N Q +F Q P
Sbjct: 341 NQHVNPQRPR---FSNQAPNQQPTGRFDPQSPNQPPSAPRPQFP-NQQPTGRFDPQFPSQ 396
Query: 57 PNYFQVPHQFSNQ------HPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSS 110
P Q P+Q NQ +PQ PN P P Q S PN PS S P++ P
Sbjct: 397 PPRPQFPNQAPNQQSTGRFNPQFPNQRPSPPQ-SRFPDQAPNQQPSGPS---PNRHPDRQ 452
Query: 111 GYMPMVRANFPS 122
G P + P+
Sbjct: 453 GPPPRFQNQAPN 464
Score = 42.4 bits (98), Expect = 2e-04
Identities = 48/151 (31%), Positives = 60/151 (38%), Gaps = 28/151 (18%)
Query: 20 NQNPNNYEDPNQFSYP-RSQNPTNYQVPHQ---------FSNQRPQNPNYFQVPHQFSNQ 69
NQ P DP S P R Q P Q P+Q F NQRP P + P Q NQ
Sbjct: 382 NQQPTGRFDPQFPSQPPRPQFPN--QAPNQQSTGRFNPQFPNQRPSPPQS-RFPDQAPNQ 438
Query: 70 HPQ--NPNYYPD----PNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSV 123
P +PN +PD P ++ NQ+ PN P + R+ Q P P + P+
Sbjct: 439 QPSGPSPNRHPDRQGPPPRFQNQA---PNQQP---TGRFEPQPPNPPRAPPRPQTRLPNE 492
Query: 124 DGPEFPEFSTQVNLGDGSADNEVNEVTPKSK 154
E P T G A TPK+K
Sbjct: 493 TSNEQP---TAPGRSSGPASGYGIFSTPKTK 520
Score = 37.7 bits (86), Expect = 0.005
Identities = 49/156 (31%), Positives = 58/156 (36%), Gaps = 42/156 (26%)
Query: 17 PISNQNPNNYEDPN-QFSYPRSQNPTNYQVPHQ--------FSNQR----------PQNP 57
P+ QN +P+ +FS R + Q P+Q FSNQ PQ+P
Sbjct: 310 PVKFQNAYAKREPSSEFSGGRDASRFEPQSPNQHVNPQRPRFSNQAPNQQPTGRFDPQSP 369
Query: 58 NY------FQVPHQ-----FSNQHPQNPNYYPDPNQYSNQSSF------VPNFHPSYGSV 100
N Q P+Q F Q P P PNQ NQ S PN PS
Sbjct: 370 NQPPSAPRPQFPNQQPTGRFDPQFPSQPPRPQFPNQAPNQQSTGRFNPQFPNQRPSPPQS 429
Query: 101 RYPSQTP--QSSGYMPMVRANFPSVDGPEFPEFSTQ 134
R+P Q P Q SG P P GP P F Q
Sbjct: 430 RFPDQAPNQQPSGPSP---NRHPDRQGPP-PRFQNQ 461
>At5g32620 putative protein
Length = 301
Score = 43.5 bits (101), Expect = 9e-05
Identities = 30/117 (25%), Positives = 52/117 (43%), Gaps = 17/117 (14%)
Query: 108 QSSGYMPMVRANFPSVD-----GPEFPEFSTQVNLGDGSADNEVNEVTPKSKKTHAPAWN 162
QSSG+M ++++ + E P FS+Q++ + +EV PK + W
Sbjct: 9 QSSGFMDLLQSQQEDMSQFASGSTEVPAFSSQLSEEGSELEGSEDEVKPKQSISRKK-WT 67
Query: 163 TAQNMVLISGWINCGTSSVVGKNQKGETFWRDIAEYCNEHCSFD--PPRDGIACRNR 217
+++VL+S W+N V+G +Q+ Y S D P R+ C+ R
Sbjct: 68 AKEDIVLVSAWLNPSKDPVIGNDQQA---------YVAASPSLDGLPKREHAKCKQR 115
>At3g01560 unknown protein
Length = 511
Score = 43.5 bits (101), Expect = 9e-05
Identities = 35/102 (34%), Positives = 49/102 (47%), Gaps = 15/102 (14%)
Query: 16 YPISN--QNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQHPQN 73
+P+++ Q P++ P+Q P SQ P Q+P QFS+Q Q P+ HPQ
Sbjct: 248 FPLTSFPQPPSSTAAPSQ--PPSSQLPP--QLPTQFSSQ--------QEPYCPPPSHPQP 295
Query: 74 PNYYPDPNQY-SNQSSFVPNFHPSYGSVRYPSQTPQSSGYMP 114
P P P Q Q+ P++ +YP Q P SSGY P
Sbjct: 296 PPSNPPPYQAPQTQTPHQPSYQSPPQQPQYPQQPPPSSGYNP 337
Score = 33.1 bits (74), Expect = 0.12
Identities = 34/104 (32%), Positives = 37/104 (34%), Gaps = 16/104 (15%)
Query: 19 SNQNPNNYEDPNQFSYPRSQNPTNYQVP-----HQFSNQRP-QNPNYFQVPHQFSNQHPQ 72
S Q P Y P P NP YQ P HQ S Q P Q P Y Q P S +P+
Sbjct: 281 SQQEP--YCPPPSHPQPPPSNPPPYQAPQTQTPHQPSYQSPPQQPQYPQQPPPSSGYNPE 338
Query: 73 NPNYYPDPNQYSNQSSFVPNFHPSYGSVR----YPSQTPQSSGY 112
P Q + P P GS Y PQ S Y
Sbjct: 339 E----QPPYQMQSYPPNPPRQQPPAGSTPSQQFYNPPQPQPSMY 378
Score = 29.3 bits (64), Expect = 1.7
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 64 HQFSNQHPQNPNYYPDPNQYS-----NQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRA 118
HQ SNQH + + + DP S Q + +F S PSQ P SS P +
Sbjct: 219 HQVSNQHAKTHSLHVDPTAQSPAPVPMQQFPLTSFPQPPSSTAAPSQ-PPSSQLPPQLPT 277
Query: 119 NFPSVDGPEFP 129
F S P P
Sbjct: 278 QFSSQQEPYCP 288
>At2g40820 hypothetical protein
Length = 945
Score = 43.5 bits (101), Expect = 9e-05
Identities = 37/131 (28%), Positives = 46/131 (34%), Gaps = 11/131 (8%)
Query: 4 NNHHYNTQNSSSYPISNQNP-NNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQV 62
NN YNT S+Q P + N FS P S N + +N PQ +
Sbjct: 744 NNSDYNTSGQDYMAGSSQYPFAPMDQSNPFSVPPSYNHHSSMPNPPMTNTNPQMQQPYYP 803
Query: 63 PHQFSNQHPQNPNYYPDPNQYSNQSSFVPN----------FHPSYGSVRYPSQTPQSSGY 112
P P N Y P S S +PN P Y P+ P +SGY
Sbjct: 804 PPMQPPPPPMNSGYMPTYIPKSVNDSSMPNPPMNNTNPQMQQPYYPPPMQPAPPPMNSGY 863
Query: 113 MPMVRANFPSV 123
MP N +V
Sbjct: 864 MPTYIPNSENV 874
>At5g28710 putative protein
Length = 264
Score = 41.6 bits (96), Expect = 3e-04
Identities = 24/65 (36%), Positives = 34/65 (51%), Gaps = 3/65 (4%)
Query: 129 PEFSTQVNLGDGSADNEVNEVTPKSKKTHAPA--WNTAQNMVLISGWINCGTSSVVGKNQ 186
P FST+ + D S D E K KK P W++ +++VLI GW+N +VG Q
Sbjct: 42 PVFSTEWSDDDPSED-EALIAGKKGKKAKKPRRNWSSIEDIVLICGWLNTSKDPMVGNEQ 100
Query: 187 KGETF 191
KG +
Sbjct: 101 KGAAY 105
>At2g15690 unknown protein
Length = 579
Score = 41.6 bits (96), Expect = 3e-04
Identities = 40/131 (30%), Positives = 53/131 (39%), Gaps = 33/131 (25%)
Query: 4 NNHHYNTQNSSSYPISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQR-PQNPNYFQV 62
N++H N Q+ S P +Q P P F SQN TN +NQR PQ+PN +
Sbjct: 56 NDYHQNPQSGS--PSQHQRPY---PPQSFD---SQNQTN-------TNQRVPQSPNQWST 100
Query: 63 PH-----QFSNQHPQNPNYYPDPNQYSNQSSFVPNFHPSYGSV--RYPSQTPQSSGYMPM 115
H Q+ Q+PQ+ P Y Q+ P G +Y PQ G+ P
Sbjct: 101 QHGGQIPQYGGQNPQHGGQRPP---YGGQN-------PQQGGQMSQYGGHNPQHGGHRPQ 150
Query: 116 VRANFPSVDGP 126
P GP
Sbjct: 151 YGGQRPQYGGP 161
>At3g29640 hypothetical protein
Length = 171
Score = 38.5 bits (88), Expect = 0.003
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 147 NEVTPKSKKTHAPAWNTAQNMVLISGWINCGTSSVVGKNQKGETFWRDIAEY--CNEHCS 204
+EV PK + W +++VL+ W+N V+G +Q+ ++F + IA Y +
Sbjct: 18 DEVKPKVGLSQKK-WFPKEDIVLVRAWLNTNKDHVIGNDQQCQSFLKQIASYVAISPQLD 76
Query: 205 FDPPRDGIACRNR 217
+ P R+ C+ R
Sbjct: 77 YLPKREHAKCKQR 89
>At2g27380 hypothetical protein
Length = 761
Score = 38.5 bits (88), Expect = 0.003
Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 20/144 (13%)
Query: 4 NNHHYNTQNSSSYPISNQN-PNNYEDPNQFSY------PRSQNPTNYQVP-HQFSNQRPQ 55
N + Y T + ++P P +Y P Y P Q P Y P + Q+P
Sbjct: 32 NFNKYETDSGHAHPPPIYGAPPSYTTPPPPIYSPPIYPPPIQKPPTYSPPIYPPPIQKPP 91
Query: 56 NPNYFQVPHQFSNQHPQNPNY----YPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSG 111
P Y + Q P P Y YP P Q ++ P +P P Q P +
Sbjct: 92 TPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPP------PIQKPPTPS 145
Query: 112 YMPMVRANFPSVDGPEFPEFSTQV 135
Y P V+ P V P P +S +
Sbjct: 146 YSPPVKP--PPVQMPPTPTYSPPI 167
Score = 30.4 bits (67), Expect = 0.75
Identities = 29/119 (24%), Positives = 41/119 (34%), Gaps = 9/119 (7%)
Query: 17 PISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQHPQNPNY 76
P +P Y P Q + +P Y P Q +P P Y + Q P P+Y
Sbjct: 91 PTPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQ----KPPTPTYSPPIYPPPIQKPPTPSY 146
Query: 77 YPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQSSGYMPMVRANFPSVDGPEFPEFSTQV 135
P Q P + P P P + Y P ++ P V P P +S +
Sbjct: 147 SPPVKPPPVQMPPTPTYSPPIKPP--PVHKPPTPTYSPPIK---PPVHKPPTPIYSPPI 200
>At1g79480 hypothetical protein
Length = 356
Score = 38.5 bits (88), Expect = 0.003
Identities = 48/146 (32%), Positives = 60/146 (40%), Gaps = 26/146 (17%)
Query: 9 NTQNSSSYPISNQNP----NNYEDPNQFSYPRSQ-NP--TNYQVPHQFSNQRP----QNP 57
N +SSS P SN NP +N P+ S P S NP T P SN P NP
Sbjct: 88 NPPDSSSNPNSNPNPPESSSNPNPPDSSSNPNSNPNPPVTVPNPPESSSNPNPPDSSSNP 147
Query: 58 NYFQVPHQFSNQHPQNPNYYPDPNQYSN-----QSSFVPN------FHPSYGSVRYPS-- 104
N P + S+ +P P P+P + S+ +SS PN + P S P
Sbjct: 148 NSNPNPPE-SSSNPNPPVTVPNPPESSSNPNPPESSSNPNPPITIPYPPESSSPNPPEIV 206
Query: 105 QTPQSSGYMPMVRANFP-SVDGPEFP 129
+P SGY P P S GP P
Sbjct: 207 PSPPESGYTPGPVLGPPYSEPGPSTP 232
>At5g14540 unknown protein
Length = 530
Score = 37.4 bits (85), Expect = 0.006
Identities = 29/100 (29%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Query: 11 QNSSSY-PISNQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQ 69
Q+ S Y P P PN P S P Q+ N P P+ + P SN
Sbjct: 329 QHPSGYNPEEPPYPQQSYPPNPPRQPPSHPPPGSAPSQQYYNAPPTPPSMYDGPGGRSNS 388
Query: 70 ------HPQNPNYYPDPNQYSNQSSFVPNFHPSYGSVRYP 103
P++ Y P+QY N S P GS YP
Sbjct: 389 GFPSGYSPESYPYTGPPSQYGNTPSVKPTHQSGSGSGAYP 428
Score = 32.3 bits (72), Expect = 0.20
Identities = 27/92 (29%), Positives = 37/92 (39%), Gaps = 11/92 (11%)
Query: 21 QNPNNYEDPNQFSYP---RSQNPTNYQVPHQFSNQRPQNPNYFQVPHQFSNQHPQNPNY- 76
Q PN + + +P +SQ P Q P+Q P + Q P+Q PQ P Y
Sbjct: 268 QLPNQFSPQQEPYFPPSGQSQPPPTIQPPYQ---PPPPTQSLHQPPYQ---PPPQQPQYP 321
Query: 77 YPDPNQYSNQSSFVPNFHPSYGSVRYPSQTPQ 108
P Q + S + P P Y YP P+
Sbjct: 322 QQPPPQLQHPSGYNPE-EPPYPQQSYPPNPPR 352
Score = 29.3 bits (64), Expect = 1.7
Identities = 35/140 (25%), Positives = 49/140 (35%), Gaps = 12/140 (8%)
Query: 3 PNNHHYNTQNSSSYPIS-NQNPNNYEDPNQFSYPRSQNPTNYQVPHQFSNQRPQNPNYFQ 61
P H + + ++ P S Q P + P + Q P P + Q
Sbjct: 209 PETHSTHVEPTAQPPASLPQPPASAAAPPSLTQQGLPPQQFIQPPASQHGLSPPSLQLPQ 268
Query: 62 VPHQFSNQHPQNPNYYPDPNQYSNQSSFVPNFHP-----SYGSVRY--PSQTPQSSGYMP 114
+P+QFS PQ Y+P Q + P + P S Y P Q PQ P
Sbjct: 269 LPNQFS---PQQEPYFPPSGQSQPPPTIQPPYQPPPPTQSLHQPPYQPPPQQPQYP-QQP 324
Query: 115 MVRANFPSVDGPEFPEFSTQ 134
+ PS PE P + Q
Sbjct: 325 PPQLQHPSGYNPEEPPYPQQ 344
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.311 0.129 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,988,368
Number of Sequences: 26719
Number of extensions: 276586
Number of successful extensions: 1010
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 839
Number of HSP's gapped (non-prelim): 219
length of query: 217
length of database: 11,318,596
effective HSP length: 95
effective length of query: 122
effective length of database: 8,780,291
effective search space: 1071195502
effective search space used: 1071195502
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0034b.4