BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0033b.8
(1310 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g70010 hypothetical protein 712 0.0
At2g16000 putative retroelement pol polyprotein 700 0.0
At4g17450 retrotransposon like protein 689 0.0
At4g14460 retrovirus-related like polyprotein 682 0.0
At2g20460 putative retroelement pol polyprotein 681 0.0
At2g13940 putative retroelement pol polyprotein 627 e-179
At1g57640 616 e-176
At4g10990 putative retrotransposon polyprotein 600 e-171
At2g16670 putative retroelement pol polyprotein 561 e-160
At4g23160 putative protein 535 e-152
At2g06840 putative retroelement pol polyprotein 524 e-148
At1g31210 putative reverse transcriptase 521 e-147
At2g23330 putative retroelement pol polyprotein 516 e-146
At1g47650 hypothetical protein 505 e-143
At4g22040 LTR retrotransposon like protein 503 e-142
At2g24660 putative retroelement pol polyprotein 500 e-141
At3g61330 copia-type polyprotein 487 e-137
At2g15920 putative retroelement pol polyprotein 487 e-137
At1g48710 hypothetical protein 486 e-137
At4g27210 putative protein 483 e-136
>At1g70010 hypothetical protein
Length = 1315
Score = 712 bits (1838), Expect = 0.0
Identities = 363/772 (47%), Positives = 508/772 (65%), Gaps = 28/772 (3%)
Query: 548 HHLC*N-PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDN 606
+H C PQQN++VERKHQH+++VAR+L FQ+H+P+++W + AVYLINRLP P+L++
Sbjct: 551 YHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILED 610
Query: 607 KCPFQILYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDL 666
KCPF++L TVP ++K+FG LC+ ST R KF PRA C F+G+ KG+ DL
Sbjct: 611 KCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDL 670
Query: 667 KSRVISISRNVTFHEHNPFKPLDSDLTPTQA--FP--TTLPPI---FDDDIPVPATVQAQ 719
++ I +SR+V FHE F L SDL+ + FP PP+ D + + +
Sbjct: 671 ETHSIIVSRHVVFHEEL-FPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHVNPSDSSSSV 729
Query: 720 E--PPVNNQNQVIAP--RTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVL 775
E P N N V P +TS R K P+YLQDY+C + S S P + + K L
Sbjct: 730 EILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVS-STP---------HEIRKFL 779
Query: 776 SYDHLNPKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDS 835
SYD +N Y +F+ + + EP+ ++EA K + WR AM E + LE TW + P D
Sbjct: 780 SYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADK 839
Query: 836 KPIGCKWVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCA 895
+ IGC+W++K+KY DGS+ERYKARLV +GYTQ EG+D+ +TFSPVAK+ +++++L + A
Sbjct: 840 RCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAA 899
Query: 896 SQ*WHLHQLDVDNAFLHASLDEQIYMTIPQGLVCNKA-----NQVCLLQKSLYGLKQASR 950
L QLD+ NAFL+ LDE+IYM +PQG + N VC L+KSLYGLKQASR
Sbjct: 900 RFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYGLKQASR 959
Query: 951 QWFNTLSASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSL 1010
QW+ S++L LG+ QS DHT ++K S G F +L+Y DD+++A N+ + ++KS +
Sbjct: 960 QWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKSQM 1019
Query: 1011 HDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKL 1070
F+++DLGE KYFLGLEI RS GI ++QRKYAL L+ ++G L KP S PMD S
Sbjct: 1020 KSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSMVF 1079
Query: 1071 GTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYL 1130
+ G ++G YRRL+GRL+YLN TRPDITFAVN+L+QF AP H QA +++L+Y+
Sbjct: 1080 AHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKILQYI 1139
Query: 1131 KGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASR 1190
KG+ G GLFY A+S L ++++D+ C D+R+S +GYC+FLGDSLI W+S+KQ S+
Sbjct: 1140 KGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQDVVSK 1199
Query: 1191 SSCESEYRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHI 1250
SS E+EYR+++ E+ WL L++L P PT +F DN++A+HIA+N +HERTKHI
Sbjct: 1200 SSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHI 1259
Query: 1251 ELDCHIVREKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDI 1302
E DCH VRE+L +GL L I+T LQ AD FTK L P+ F ISK+G+ +I
Sbjct: 1260 ESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKMGLLNI 1311
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 700 bits (1806), Expect = 0.0
Identities = 363/781 (46%), Positives = 502/781 (63%), Gaps = 26/781 (3%)
Query: 531 PGISHASFLFF*GHHSSHHLC*NPQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVA 590
P + SF G S H P+QN++VERKHQH+++VARAL+FQ+ +P++ W V
Sbjct: 686 PELKFTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVL 745
Query: 591 HAVYLINRLPTPVLDNKCPFQILYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCI 650
AV+LINR P+ +L NK P++IL T P L+ FG LC+ ST R KF PR+ C+
Sbjct: 746 TAVFLINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACL 805
Query: 651 FLGFKPDTKGFVTYDLKSRVISISRNVTFHEHN-PFKPLDSDLTPTQAFPTTLPP---IF 706
FLG+ KG+ DL+S + ISRNV FHE P + + F +P I
Sbjct: 806 FLGYPSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAKNPGSESSLKLFTPMVPVSSGII 865
Query: 707 DDDIPVPATVQAQEPPVNNQNQVIAPRTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTG 766
D P+++ +Q + Q +SQR+RKPP++L DYHC + SD
Sbjct: 866 SDTTHSPSSLPSQISDLPPQI------SSQRVRKPPAHLNDYHCNTMQSDH--------- 910
Query: 767 INYPLSKVLSYDHLNPKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTW 826
YP+S +SY ++P + ++ NI+ PT ++EA + W +A+D EI A+E+ TW
Sbjct: 911 -KYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTW 969
Query: 827 ILVDKPPDSKPIGCKWVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTT 886
+ P K +GCKWV+ +K+ DG++ERYKARLV KGYTQ EG+D+ DTFSPVAKMTT
Sbjct: 970 EITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTT 1029
Query: 887 LRVILALCASQ*WHLHQLDVDNAFLHASLDEQIYMTIPQGLVCNK-----ANQVCLLQKS 941
++++L + AS+ W L QLDV NAFL+ L+E+I+M IP+G K +N V L++S
Sbjct: 1030 IKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRS 1089
Query: 942 LYGLKQASRQWFNTLSASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMH 1001
+YGLKQASRQWF S+SL LG+K+++ DHTL++K G F +L+Y DD+++A
Sbjct: 1090 IYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEA 1149
Query: 1002 EIQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVS 1061
+ L +F+++DLG+ KYFLGLE+AR+T+GI + QRKYAL+L+ +G LA KPVS
Sbjct: 1150 AAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELLQSTGMLACKPVS 1209
Query: 1062 TPMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQ 1121
PM + K+ + G + DI YRR+VG+L+YL TRPDITFAVN+L QF SAP H
Sbjct: 1210 VPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLT 1269
Query: 1122 AAHRVLKYLKGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWR 1181
AA+RVL+Y+KG+ G GLFY ASS TL F+DSDWA C D+R+S T + +F+GDSLISWR
Sbjct: 1270 AAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFVGDSLISWR 1329
Query: 1182 SKKQSTASRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNP 1241
SKKQ T SRSS E+EYRA+A CE+ WL LL L P ++ D+ +A++IA NP
Sbjct: 1330 SKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPI-LYSDSTAAIYIATNP 1388
Query: 1242 SYHERTKHIELDCHIVREKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKD 1301
+HERTKHI+LDCH VRE+L G + LL + T Q AD+ TK L P F+ SK+ + +
Sbjct: 1389 VFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFPYQFEHLKSKMSILN 1448
Query: 1302 I 1302
I
Sbjct: 1449 I 1449
>At4g17450 retrotransposon like protein
Length = 1433
Score = 689 bits (1778), Expect = 0.0
Identities = 350/771 (45%), Positives = 489/771 (63%), Gaps = 37/771 (4%)
Query: 547 SHHLC*N-PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLD 605
++H C P+QN++VERKHQH+++VARALLFQ+++P+ FW V AV+LINRLPTPVL+
Sbjct: 687 AYHSCPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLN 746
Query: 606 NKCPFQILYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYD 665
NK P++ L N P +LK FG LC+ ST R KF+PRA C+FLG+ KG+ D
Sbjct: 747 NKSPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLD 806
Query: 666 LKSRVISISRNVTFHEHN-PFKPLDSDLTPTQAFPTTLPPIFDDDIPVPATVQAQEPPVN 724
+++ +SISR+V FHE PF FP P DD+P+ T P
Sbjct: 807 IETHAVSISRHVIFHEDIFPFISSTIKDDIKDFFPLLQFPARTDDLPLEQTSIIDTHPHQ 866
Query: 725 N--QNQVIAP--RTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHL 780
+ ++ + P S+R +KPP +LQD+HC Y++
Sbjct: 867 DVSSSKALVPFDPLSKRQKKPPKHLQDFHC--------------------------YNNT 900
Query: 781 NPKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGC 840
+ +F+ NI++++ P R+SEA + W AM +EI A+ R TW +V PP+ K IGC
Sbjct: 901 TEPFHAFINNITNAVIPQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGC 960
Query: 841 KWVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WH 900
KWV+ +K+ DGSIERYKARLV KGYTQ EG+D+++TFSPVAK+T++R++L L A W
Sbjct: 961 KWVFTIKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWS 1020
Query: 901 LHQLDVDNAFLHASLDEQIYMTIPQGLV-----CNKANQVCLLQKSLYGLKQASRQWFNT 955
+HQLD+ NAFL+ LDE+IYM IP G + +C L KS+YGLKQASRQW+
Sbjct: 1021 VHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLK 1080
Query: 956 LSASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFR 1015
LS +LK +G+++SNADHTL+IK ++G +L+Y DD+++ N + + L F+
Sbjct: 1081 LSNTLKGMGFQKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFK 1140
Query: 1016 IKDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIG 1075
++DLG AKYFLG+EIARS GI + QRKY L+L+S +G L SKP S P+D S KL G
Sbjct: 1141 LRDLGAAKYFLGIEIARSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDG 1200
Query: 1076 TPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPG 1135
PLTD SYR+LVG+L+YL TRPDI +AVN L QF APT +H A H+VL+YLKG+ G
Sbjct: 1201 VPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVG 1260
Query: 1136 SGLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCES 1195
GLFY A L ++DSD+ C D+R+ + YC+F+GD L+SW+SKKQ T S S+ E+
Sbjct: 1261 QGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEA 1320
Query: 1196 EYRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCH 1255
E+RAM+ E+ WL L D P + P ++ DN +A+HI +N +HERTK +ELDC+
Sbjct: 1321 EFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCY 1380
Query: 1256 IVREKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDIHLPV 1306
RE ++ G + + + T Q AD TK++ PA F I K+G+ +I P+
Sbjct: 1381 KTREAVESGFLKTMFVETGEQVADPLTKAIHPAQFHKLIGKMGVCNIFAPL 1431
>At4g14460 retrovirus-related like polyprotein
Length = 1489
Score = 682 bits (1760), Expect = 0.0
Identities = 362/821 (44%), Positives = 499/821 (60%), Gaps = 112/821 (13%)
Query: 544 HHSSHHL--C*NPQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPT 601
H HH PQQN++VERKHQH+++VARALLFQ+++P+ +WS V AV+LINRLP+
Sbjct: 716 HGMLHHFSCAYTPQQNSVVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPS 775
Query: 602 PVLDNKCPFQILYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGF 661
P+L+NK P++++ N PD + LK FG LCFVST R KF PRA C+FLG+ KG+
Sbjct: 776 PLLNNKSPYELILNKQPDYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGY 835
Query: 662 VTYDLKSRVISISRNVTFHEHN-PFKPLDS-----DLTPTQAFPTTLP-------PIFDD 708
DL+S +++SRNV F EH PFK + D+ P P P P+ D+
Sbjct: 836 KVLDLESHSVTVSRNVVFKEHVFPFKTSELLNKAVDMFPNSILPLPAPLHFVETMPLIDE 895
Query: 709 DIPVPATVQAQE----------------PPVNN------QNQVIAPRTSQRIRKPPSYLQ 746
D +P T ++ PP +N + + S+R + PSYL
Sbjct: 896 DSLIPTTTDSRTADNHASSSSSALPSIIPPSSNTETQDIDSNAVPITRSKRTTRAPSYLS 955
Query: 747 DYHCTLLSSDS-VPITSSSTGIN----------------YPLSKVLSYDHLNPKYQSFVM 789
+YHC+L+ S S +P T SS I+ YP+S V+SYD P QS++
Sbjct: 956 EYHCSLVPSISTLPPTDSSIPIHPLPEIFTASSPKKTTPYPISTVVSYDKYTPLCQSYIF 1015
Query: 790 NISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYK 849
++ EP FS+A+K E W + +E++A+E N+TW + PPD +GCKWV+ +KY
Sbjct: 1016 AYNTETEPKTFSQAMKSEKWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYN 1075
Query: 850 QDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNA 909
DG++ERYKARLV +G+TQ EG+DF DTFSPVAK+T+ +++L L A W L Q+DV +A
Sbjct: 1076 PDGTVERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDA 1135
Query: 910 FLHASLDEQIYMTIPQGLVCNKA-----NQVCLLQKSLYGLKQASRQWFNTLSASLKKLG 964
FLH LDE+I+M++PQG N VC L KS+YGLKQASRQW+
Sbjct: 1136 FLHGDLDEEIFMSLPQGYTPPAGTILPPNPVCRLLKSIYGLKQASRQWYKR--------- 1186
Query: 965 YKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKY 1024
F A L+Y DD+++A N+ E++ +K+ L +F+IKDLG A++
Sbjct: 1187 ------------------FVAALVYIDDIMIASNNDAEVENLKALLRSEFKIKDLGPARF 1228
Query: 1025 FLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSY 1084
FLGL L KP S PMD + L ++GTPL + +Y
Sbjct: 1229 FLGL--------------------------LGCKPSSIPMDPTLHLVRDMGTPLPNPTAY 1262
Query: 1085 RRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASS 1144
R+L+GRLLYL TRPDIT+AV+QLSQF+SAP+DIH QAAH+VL+Y+K +PG GL Y A
Sbjct: 1263 RKLIGRLLYLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADY 1322
Query: 1145 STTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTV 1204
L FSD+DWA C DTR+SI+G+C++LG SLISW+SKKQ+ ASRSS ESEYR+MA
Sbjct: 1323 EICLNGFSDADWAACKDTRRSISGFCIYLGTSLISWKSKKQAVASRSSTESEYRSMAQAT 1382
Query: 1205 CEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQG 1264
CEI WL LL+DL+ P P +F DN+SA+H + NP +HERTKHIE+DCH VR++++ G
Sbjct: 1383 CEIIWLQQLLKDLHIPLTCPAKLFCDNKSALHSSLNPVFHERTKHIEIDCHTVRDQIKAG 1442
Query: 1265 LVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDIHLP 1305
+ L + T Q AD+ TK+L P PF + ++ + + LP
Sbjct: 1443 NLKALHVPTENQHADILTKALHPGPFHHLLRQMSLSSLFLP 1483
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 681 bits (1758), Expect = 0.0
Identities = 354/766 (46%), Positives = 492/766 (64%), Gaps = 31/766 (4%)
Query: 547 SHHLC*N-PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLD 605
S H C P+QN++VERKHQH+++VARAL+FQ+++ + +W V AV+LINR P+ +L
Sbjct: 712 SFHSCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLS 771
Query: 606 NKCPFQILYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYD 665
NK PF++L +PD + LK FG LC+ ST + R KF PR+ C+FLG+ KG+ D
Sbjct: 772 NKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLD 831
Query: 666 LKSRVISISRNVTFHEHNPFKPLDSDLTPTQAFPTTLPPIFDDDIPVPA----TVQAQEP 721
L+S V+ ISRNV FHE PL S +Q TT +F P+ + T P
Sbjct: 832 LESNVVHISRNVEFHEE--LFPLAS----SQQSATTASDVFTPMDPLSSGNSITSHLPSP 885
Query: 722 PVNNQNQVIAPRTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLN 781
++ Q+ + +RI K P++LQDYHC ++ D ++P+S LSY ++
Sbjct: 886 QISPSTQI----SKRRITKFPAHLQDYHCYFVNKDD----------SHPISSSLSYSQIS 931
Query: 782 PKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCK 841
P + ++ NIS P + EA + W A+DQEI A+ER TW + PP K +GCK
Sbjct: 932 PSHMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCK 991
Query: 842 WVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHL 901
WV+ VK+ DGS+ER+KAR+V KGYTQ EG+D+ +TFSPVAKM T++++L + AS+ W+L
Sbjct: 992 WVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYL 1051
Query: 902 HQLDVDNAFLHASLDEQIYMTIPQGLVCNKA-----NQVCLLQKSLYGLKQASRQWFNTL 956
+QLD+ NAFL+ L+E IYM +P G K N VC L+KS+YGLKQASRQWF
Sbjct: 1052 NQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKF 1111
Query: 957 SASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRI 1016
S SL LG+++ + DHTL+++ F LL+Y DD+++A Q + +L F++
Sbjct: 1112 SNSLLALGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKL 1171
Query: 1017 KDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGT 1076
++LG KYFLGLE+AR++ GI L+QRKYAL+L++ + L KP S PM + +L N G
Sbjct: 1172 RELGPLKYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGL 1231
Query: 1077 PLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGS 1136
L D YRRLVG+L+YL TRPDITFAVN+L QF SAP H A ++VL+Y+KG+ G
Sbjct: 1232 LLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQ 1291
Query: 1137 GLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESE 1196
GLFY A TL ++D+DW C D+R+S TG+ +F+G SLISWRSKKQ T SRSS E+E
Sbjct: 1292 GLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAE 1351
Query: 1197 YRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHI 1256
YRA+A CE+ WL LL L P ++ D+ +A++IA NP +HERTKHIE+DCH
Sbjct: 1352 YRALALASCEMAWLSTLLLALRVHSGVPI-LYSDSTAAVYIATNPVFHERTKHIEIDCHT 1410
Query: 1257 VREKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDI 1302
VREKL G + LL + T Q AD+ TK L P F +SK+ +++I
Sbjct: 1411 VREKLDNGQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNI 1456
>At2g13940 putative retroelement pol polyprotein
Length = 1501
Score = 627 bits (1617), Expect = e-179
Identities = 334/821 (40%), Positives = 492/821 (59%), Gaps = 69/821 (8%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQIL 613
PQQN VERKH+H+++VARALLFQA LP+ FW ++ A YLINR P+ +L + P+++L
Sbjct: 680 PQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVL 739
Query: 614 YNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVISI 673
+ + P + L++FG+ C+V +T + KF R+ CIF+G+ KG+ YD++ +
Sbjct: 740 HGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLV 799
Query: 674 SRNVTFHEHN-PFKPLDSDLTPTQAFPTT-------LPP--------------------- 704
SR+V F E P+ ++S + + PT +PP
Sbjct: 800 SRDVIFREEVFPYAGVNSSTLASTSLPTVSEDDDWAIPPLEVRGSIDSVETERVVCTTDE 859
Query: 705 ------IFDDDIP------------VPATVQAQEPPVNNQNQVIAP------------RT 734
+ D +IP P +V P ++ P R
Sbjct: 860 VVLDTSVSDSEIPNQEFVPDDTPPSSPLSVSPSGSPNTPTTPIVVPVASPIPVSPPKQRK 919
Query: 735 SQRIRKPPSYLQDYHC-----TLLSSDSVPITSSSTGIN-----YPLSKVLSYDHLNPKY 784
S+R PP L DY T S ++P S + +PL+ +S + +
Sbjct: 920 SKRATHPPPKLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSSSH 979
Query: 785 QSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVY 844
++++ I+ ++EP F EAV+ + W AM E++ALE N+TW +VD PP IG +WV+
Sbjct: 980 RAYLAAITDNVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVF 1039
Query: 845 KVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQL 904
K KY DG++ERYKARLVV+G QVEG D+++TF+PV +MTT+R +L A+ W ++Q+
Sbjct: 1040 KTKYNSDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQM 1099
Query: 905 DVDNAFLHASLDEQIYMTIPQGLVCNKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLG 964
DV NAFLH L+E++YM +P G + ++VC L+KSLYGLKQA R WF LS SL + G
Sbjct: 1100 DVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFG 1159
Query: 965 YKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKY 1024
+ QS D++L+ + +L+Y DD+L+ GND + +Q K L F +KDLG+ KY
Sbjct: 1160 FVQSYEDYSLFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKY 1219
Query: 1025 FLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSY 1084
FLG+E++R GI L+QRKYAL +I+DSG+L S+P TP++ + L ++ G L+D Y
Sbjct: 1220 FLGIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPY 1279
Query: 1085 RRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASS 1144
RRLVGRLLYL TRP+++++V+ L+QF+ P + H AA RV++YLKGSPG G+ A
Sbjct: 1280 RRLVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADP 1339
Query: 1145 STTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTV 1204
TL + DSDW C TR+SI+ Y + LG S ISW++KKQ T S SS E+EYRAM+ +
Sbjct: 1340 DLTLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYAL 1399
Query: 1205 CEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQG 1264
EI+WL LL++L Q P ++ D+++A+HIA NP +HERTKHIE DCH VR+ ++ G
Sbjct: 1400 KEIKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDG 1459
Query: 1265 LVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDIHLP 1305
++ + TT Q ADVFTK+L F +SKLG++++H P
Sbjct: 1460 IITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHTP 1500
>At1g57640
Length = 1444
Score = 616 bits (1588), Expect = e-176
Identities = 313/802 (39%), Positives = 490/802 (61%), Gaps = 51/802 (6%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQIL 613
P QN VERKH+H++++ARAL FQ++LP+ FW + A YLINR P+ +L K P+++L
Sbjct: 643 PHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEML 702
Query: 614 YNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVISI 673
Y T P ++L++FG+LC+ KF R+ +C+F+G+ KG+ +DL+ + +
Sbjct: 703 YKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFV 762
Query: 674 SRNVTFHEHN-PFKPL----------------------------------DSDLTPTQAF 698
SR+V F E P+ + ++ + P A
Sbjct: 763 SRDVIFQETEFPYSKMSCNEEDERVLVDCVGPPFIEEAIGPRTIIGRNIGEATVGPNVAT 822
Query: 699 PTTLPPIFD--------------DDIPVPATVQAQEPPVNNQNQV-IAPRTSQRIRKPPS 743
+P I D +TVQ + P+++ I R S R + P
Sbjct: 823 GPIIPEINQESSSPSEFVSLSSLDPFLASSTVQTADLPLSSTTPAPIQLRRSSRQTQKPM 882
Query: 744 YLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLNPKYQSFVMNISSSLEPTRFSEA 803
L+++ +S +S+ +SS+ + YP+ K + +++F+ +++ +EPT ++EA
Sbjct: 883 KLKNFVTNTVSVESISPEASSSSL-YPIEKYVDCHRFTSSHKAFLAAVTAGMEPTTYNEA 941
Query: 804 VKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDGSIERYKARLVV 863
+ + WR+AM EIE+L NQT+ +V+ PP + +G KWVYK+KY+ DG+IERYKARLVV
Sbjct: 942 MVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVV 1001
Query: 864 KGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLHASLDEQIYMTI 923
G Q EGVD+ +TF+PVAKM+T+R+ L + A++ WH+HQ+DV NAFLH L E++YM +
Sbjct: 1002 LGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKL 1061
Query: 924 PQGLVCNKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQSNADHTLYIKASSGSF 983
PQG C+ ++VC L KSLYGLKQA R WF+ LS++LK+ G+ QS +D++L+ + G F
Sbjct: 1062 PQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIF 1121
Query: 984 TALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRK 1043
+L+Y DD++++G+ + KS L F +KDLG KYFLG+E++R+ G L+QRK
Sbjct: 1122 VHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRK 1181
Query: 1044 YALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITF 1103
Y L +IS+ G L ++P + P++ + KL + L+D YRRLVGRL+YL TRP++++
Sbjct: 1182 YVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLVVTRPELSY 1241
Query: 1104 AVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTR 1163
+V+ L+QF+ P H AA RV++YLK +PG G+ ++S+ + + DSD+A C TR
Sbjct: 1242 SVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTR 1301
Query: 1164 KSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQLA 1223
+S+TGY + LGD+ ISW++KKQ T SRSS E+EYRAMA E+ WL +L DL +
Sbjct: 1302 RSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQ 1361
Query: 1224 PTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLVHLLPISTTLQTADVFTK 1283
+F D++SA+ ++ NP HERTKH+E+DCH +R+ + G++ + + Q AD+ TK
Sbjct: 1362 AMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTK 1421
Query: 1284 SLTPAPFKTCISKLGMKDIHLP 1305
+L + + KLG+ D+H P
Sbjct: 1422 ALGEKEVRYFLRKLGILDVHAP 1443
>At4g10990 putative retrotransposon polyprotein
Length = 1203
Score = 600 bits (1547), Expect = e-171
Identities = 321/686 (46%), Positives = 427/686 (61%), Gaps = 62/686 (9%)
Query: 659 KGFVTYDLKSRVISISRNVTFHEHN-PFKPLDSDLTPTQAFPTTLPPI-----------F 706
KG+ DL+S ISI+RNV FHE PFK FP ++ P+
Sbjct: 340 KGYKVLDLESHSISITRNVVFHETKFPFKTSKFLKESVDMFPNSILPLPAPLHFVESMPL 399
Query: 707 DDDI--------------------PVPATVQAQEPPVNNQNQVIAP-RTSQRIRKPPSYL 745
DDD+ P+P+TV Q + + P +R K P+YL
Sbjct: 400 DDDLRADDNNASTSNSASSASSIPPLPSTVNTQNTDALDIDTNSVPIARPKRNAKAPAYL 459
Query: 746 QDYHCTLLSSDSVPITSS-----STGIN--------------YPLSKVLSYDHLNPKYQS 786
+YHC +SVP SS ST I YP+S +SYD L P + S
Sbjct: 460 SEYHC-----NSVPFLSSLSPTTSTSIETPSSSIPPKKITTPYPMSTAISYDKLTPLFHS 514
Query: 787 FVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKV 846
++ + EP F++A+K E W +A ++E+ ALE+N+TWI+ +GCKWV+ +
Sbjct: 515 YICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVFTI 574
Query: 847 KYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDV 906
KY DGSIERYKARLV +G+TQ EG+D+ +TFSPVAK +++++L L A+ W L Q+DV
Sbjct: 575 KYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQMDV 634
Query: 907 DNAFLHASLDEQIYMTIPQGL-----VCNKANQVCLLQKSLYGLKQASRQWFNTLSASLK 961
NAFLH LDE+IYM++PQG + + VC L KSLYGLKQASRQW+ LS+
Sbjct: 635 SNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSVFL 694
Query: 962 KLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGE 1021
+ QS AD+T+++K S S +L+Y DD+++A ND ++ +K L +F+IKDLG
Sbjct: 695 GANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRSEFKIKDLGP 754
Query: 1022 AKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDI 1081
A++FLGLEIARS+ GI + QRKYA L+ D G KP S PMD + L +GT L +
Sbjct: 755 ARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNA 814
Query: 1082 GSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYP 1141
SYR LVGRLLYL TRPDITFAV+ LSQFLSAPTDIH QAAH+VL+YLKG+PG GL Y
Sbjct: 815 TSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYS 874
Query: 1142 ASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMA 1201
ASS L FSD+DW C D+R+S+TG+C++LG SLI+W+SKKQS SRSS ESEYR++A
Sbjct: 875 ASSELCLNGFSDADWGTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLA 934
Query: 1202 TTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKL 1261
CEI WL LL+DL+ P +F DN+SA+H+A NP +HERTKHIE+DCH VR+++
Sbjct: 935 QATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIEIDCHTVRDQI 994
Query: 1262 QQGLVHLLPISTTLQTADVFTKSLTP 1287
+ G + L + T Q AD+ TK L P
Sbjct: 995 KAGKLKTLHVPTGNQLADILTKPLHP 1020
>At2g16670 putative retroelement pol polyprotein
Length = 1333
Score = 561 bits (1446), Expect = e-160
Identities = 314/804 (39%), Positives = 456/804 (56%), Gaps = 66/804 (8%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQIL 613
P++N VERKH+H+++VARAL FQA+LP+ FW V A YLINR P+ VL++ P++ L
Sbjct: 543 PERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERL 602
Query: 614 YNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVISI 673
+ P +L++FG+LC+ KF R+ +C+F+G+ KG+ +DL+ +
Sbjct: 603 HKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFV 662
Query: 674 SRNVTF----------HEHNPFK-----------------------------------PL 688
SR+V F HE N + P+
Sbjct: 663 SRDVVFSELEFPFRISHEQNVIEEEEEALWAPIVDGLIEEEVHLGQNAGPTPPICVSSPI 722
Query: 689 DSDLTPTQAFPTTLPPIFDDDIPVPA--TVQAQEP--PVNNQNQVIA---PRTSQRIRKP 741
T +++ +T P+ + +P PA T A P P N Q ++ P T+Q + P
Sbjct: 723 SPSATSSRSEHSTSSPLDTEVVPTPATSTTSASSPSSPTNLQFLPLSRAKPTTAQAVAPP 782
Query: 742 PSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLNPKYQSFVMNISSSLEPTRFS 801
T + + P+T +N + + K S + + + RFS
Sbjct: 783 AVPPPRRQST--RNKAPPVTLKDFVVNTTVCQ-----ESPSKLNSILYQLQKRDDTRRFS 835
Query: 802 EAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDGSIERYKARL 861
H + I+A E N TW + D PP + IG +WVYKVK+ DGS+ERYKARL
Sbjct: 836 --ASHTTY-----VAIDAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKARL 888
Query: 862 VVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLHASLDEQIYM 921
V G Q EG D+ +TF+PVAKM T+R+ L + + W +HQ+DV NAFLH L E++YM
Sbjct: 889 VALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYM 948
Query: 922 TIPQGLVCNKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQSNADHTLYIKASSG 981
+P G + N+VC L+K+LYGLKQA R WF L+ +LK+ G++QS AD++L+
Sbjct: 949 KLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGS 1008
Query: 982 SFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQ 1041
+L+Y DD+++ GN Q K L F +KDLG KYFLG+E+ARST+GI + Q
Sbjct: 1009 VRIKILIYVDDLIITGNSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARSTTGIYICQ 1068
Query: 1042 RKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDI 1101
RKYAL +IS++G L KP + P++ + KLG + LTD YRRLVGRL+YL TR D+
Sbjct: 1069 RKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLAVTRLDL 1128
Query: 1102 TFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAFSDSDWAGCID 1161
F+V+ L++F+ P + H AA RV++YLK PG G+F S +T + DSDWAG
Sbjct: 1129 AFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSDWAGDPM 1188
Query: 1162 TRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQ 1221
+R+S+TGY + GDS ISW++KKQ T S+SS E+EYRAM+ E+ WL LL L
Sbjct: 1189 SRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFSLGVSH 1248
Query: 1222 LAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLVHLLPISTTLQTADVF 1281
+ P M D++SA++IA NP +HERTKHIE+D H VR++ +G++ + TT Q AD+F
Sbjct: 1249 VQPMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQLADIF 1308
Query: 1282 TKSLTPAPFKTCISKLGMKDIHLP 1305
TK L F KLG+++++ P
Sbjct: 1309 TKPLGRDCFSAFRIKLGIRNLYAP 1332
>At4g23160 putative protein
Length = 1240
Score = 535 bits (1379), Expect = e-152
Identities = 276/577 (47%), Positives = 377/577 (64%), Gaps = 24/577 (4%)
Query: 721 PPVNNQNQVIAP--RTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYD 778
P N QN V P TS R + P+YLQDY+C ++S ++ + +S+ LSY+
Sbjct: 18 PSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHSVASLTI----------HDISQFLSYE 67
Query: 779 HLNPKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPI 838
++P Y SF++ I+ + EP+ ++EA + W AMD EI A+E TW + PP+ KPI
Sbjct: 68 KVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPI 127
Query: 839 GCKWVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ* 898
GCKWVYK+KY DG+IERYKARLV KGYTQ EG+DF +TFSPV K+T++++ILA+ A
Sbjct: 128 GCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYN 187
Query: 899 WHLHQLDVDNAFLHASLDEQIYMTIPQGLVCNKA-----NQVCLLQKSLYGLKQASRQWF 953
+ LHQLD+ NAFL+ LDE+IYM +P G + N VC L+KS+YGLKQASRQWF
Sbjct: 188 FTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWF 247
Query: 954 NTLSASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQ 1013
S +L G+ QS++DHT ++K ++ F +L+Y DD+++ N+ + +KS L
Sbjct: 248 LKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSC 307
Query: 1014 FRIKDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTN 1073
F+++DLG KYFLGLEIARS +GI + QRKYAL L+ ++G L KP S PMD S +
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367
Query: 1074 IGTPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGS 1133
G D +YRRL+GRL+YL TR DI+FAVN+LSQF AP H+QA ++L Y+KG+
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427
Query: 1134 PGSGLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSC 1193
G GLFY + + L FSD+ + C DTR+S GYC+FLG SLISW+SKKQ S+SS
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487
Query: 1194 ESEYRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELD 1253
E+EYRA++ E+ WL ++L P PT +F DN +A+HIA N +HERTKHIE D
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547
Query: 1254 CHIVREKLQQGLVHLLPISTTLQT---ADVFTKSLTP 1287
CH VRE+ V+ +S + Q D FT+ L+P
Sbjct: 548 CHSVRER----SVYQATLSYSFQAYDEQDGFTEYLSP 580
>At2g06840 putative retroelement pol polyprotein
Length = 1102
Score = 524 bits (1350), Expect = e-148
Identities = 308/759 (40%), Positives = 434/759 (56%), Gaps = 67/759 (8%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQIL 613
PQQNA VERKH+H+++VAR LFQ + P P+PVL K P+++L
Sbjct: 403 PQQNARVERKHRHILNVARTCLFQGNFPT-----------------PSPVLKGKTPYEVL 445
Query: 614 YNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVISI 673
+ P L+ FG LC+ + KF R+ KCIF+G+ +T T+D SI
Sbjct: 446 FGKQPSYDMLRTFGCLCYAHIRPRDKDKFASRSRKCIFIGYPHETATPNTHD------SI 499
Query: 674 SRNVTFHEHNPFKPLDSDLTPTQAFPTTLPPIFDDDIPVPATVQAQEPPVNNQNQVIAPR 733
T + N P +TP P + I I V +N + +P
Sbjct: 500 DPTSTSSDENNTPP--EPVTPQAEQPHSPSSISSPHI-VHNKGSVHSRHLNEDHDSSSPG 556
Query: 734 TSQRIRK------PPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLNPKYQSF 787
+ + K PP YL+DY + S P TSS + +S +S +H+ +F
Sbjct: 557 LPELLGKGHRPKHPPVYLKDYVAHKVHSS--PHTSSPGLSDSNVSPTVSANHI-----AF 609
Query: 788 VMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVK 847
+ I S E F + V + W AM +EIEALE N TW + D P K I KWVYK+K
Sbjct: 610 MAAILDSNEQNHFKDDVLIKEWCDAMQKEIEALEANHTWDVTDLPHGKKAISSKWVYKLK 669
Query: 848 YKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVD 907
+ DG++ER+KARLVV G Q EG+DF++TF+PVAKMTT+R++LA+ A++ W + Q+DV
Sbjct: 670 FNSDGTLERHKARLVVMGNHQKEGIDFKETFAPVAKMTTVRLLLAVAAAKDWDVFQMDVH 729
Query: 908 NAFLHASLDEQIYMTIPQGLVCNKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQ 967
NAFLH L+ Q+SLYGLKQA R WF LS +L+KLG+ Q
Sbjct: 730 NAFLHGDLE----------------------QESLYGLKQAPRCWFAKLSTALRKLGFTQ 767
Query: 968 SNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLG 1027
S D++L+ G+ L+Y DD ++ GN++ I K LH F +KDLG+ KYFLG
Sbjct: 768 SYEDYSLFSLNRDGTVIHFLVYVDDFIIVGNNLKAIDHFKEHLHKCFHMKDLGKLKYFLG 827
Query: 1028 LEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDI-GSYRR 1086
LE++R G L+Q+KYAL +I+++G L KP + PM+ KLG+ I +P+ D YRR
Sbjct: 828 LEVSRGADGFCLSQQKYALDIINEAGLLGYKPSAVPMELHHKLGS-ISSPVFDNPAQYRR 886
Query: 1087 LVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSST 1146
LV R +YL TRPD+++AV+ LSQF+ P + H A R+++YLKGSP G+ + +
Sbjct: 887 LVDRFIYLTITRPDLSYAVHILSQFMQTPLEAHWHATLRLVRYLKGSPDQGILLRSDRAL 946
Query: 1147 TLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCE 1206
+LTA+ DSD+ C TR+S++ Y L+LGD+ ISW++KKQ T S SS E+EYRAMA T+ E
Sbjct: 947 SLTAYCDSDYNPCPRTRRSLSAYVLYLGDTPISWKTKKQDTVSSSSAEAEYRAMAYTLKE 1006
Query: 1207 IQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLV 1266
I+WL L+ L P +F D+Q+A+HIA NP +HERTKHIE DCH VR+ + ++
Sbjct: 1007 IKWLKALMTTLGVDHTQPILLFCDSQAAIHIAANPVFHERTKHIEKDCHQVRDAVTDKVI 1066
Query: 1267 HLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDIHLP 1305
ISTT D+ TK+L F+ +S LG + LP
Sbjct: 1067 STPHISTT----DLLTKALPRPTFERLLSTLGTCNYDLP 1101
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 521 bits (1341), Expect = e-147
Identities = 296/783 (37%), Positives = 435/783 (54%), Gaps = 35/783 (4%)
Query: 545 HSSHHLC*---NPQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPT 601
H HH PQQN + ERKH+H++ + ++LF +H P FW + A Y+INRLP+
Sbjct: 598 HGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPS 657
Query: 602 PVLDNKCPFQILYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGF 661
VL N P++ L+ PD ++L++FG+ C+ + KFDPR+ +C+FLG+ KG+
Sbjct: 658 SVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGY 717
Query: 662 VTYDLKSRVISISRNVTFHEHN-PFKPLDSDLTPTQAFPTTLPPIFD--DDIPVPAT-VQ 717
+ + + ISRNV F+E PFK L P + P + +I VPA VQ
Sbjct: 718 RCFYPPTGKVYISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISEISVPAAPVQ 777
Query: 718 AQEPPVNNQNQVIAPRTSQRIRKPPSYLQDYHCTLLSSDSVPI--------------TSS 763
P++ + T Q P+ + ++ + I T S
Sbjct: 778 LFSKPIDLNTYAGSQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQVINSHAMTTRS 837
Query: 764 STGINYPLSKVLSYDHLNPKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERN 823
GI P N +Y + + + ++ EP + A+KH W +A+ +EI +
Sbjct: 838 KAGIQKP----------NTRY-ALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHML 886
Query: 824 QTWILVDKPPDSKPIGCKWVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAK 883
TW LV D + KWV+K K DGSI++ KARLV KG+ Q EGVD+ +TFSPV +
Sbjct: 887 HTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVR 946
Query: 884 MTTLRVILALCASQ*WHLHQLDVDNAFLHASLDEQIYMTIPQGLVC-NKANQVCLLQKSL 942
T+R++L + S+ W + QLDV NAFLH L E ++M P G + K VC L K++
Sbjct: 947 TATIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAI 1006
Query: 943 YGLKQASRQWFNTLSASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHE 1002
YGLKQA R WF+T S L G+ S +D +L++ G LLLY DD+LL G+D
Sbjct: 1007 YGLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSL 1066
Query: 1003 IQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVST 1062
++ + +L ++F +KDLG +YFLG++I +G+ L+Q YA ++ +G P+ T
Sbjct: 1067 LEDLLQALKNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPT 1126
Query: 1063 PMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQA 1122
P+ Q+L + +R L G+L YL TRPDI FAVN + Q + +PT
Sbjct: 1127 PLP--QQLDNLNSELFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGL 1184
Query: 1123 AHRVLKYLKGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRS 1182
R+L+Y+KG+ G GL +S+ TL+A+SDSD AGC +TR+S TG+C+ LG +LISW +
Sbjct: 1185 LKRILRYIKGTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSA 1244
Query: 1183 KKQSTASRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPS 1242
K+Q T S SS E+EYRA+ EI W+ +LL+DL PQ PT ++ DN SA++++ NP+
Sbjct: 1245 KRQPTVSNSSTEAEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLSAVYLSANPA 1304
Query: 1243 YHERTKHIELDCHIVREKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDI 1302
H R+KH + D H +RE++ GL+ IS T Q ADVFTKSL F SKLG+
Sbjct: 1305 LHNRSKHFDTDYHYIREQVALGLIETQHISATFQLADVFTKSLPRRAFVDLRSKLGVSGS 1364
Query: 1303 HLP 1305
P
Sbjct: 1365 PTP 1367
>At2g23330 putative retroelement pol polyprotein
Length = 1496
Score = 516 bits (1330), Expect = e-146
Identities = 266/567 (46%), Positives = 373/567 (64%), Gaps = 5/567 (0%)
Query: 735 SQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLNPKYQSFVMNISSS 794
S I P L T LS+DSV S YPLS L+ + + +F+ I S
Sbjct: 930 SHNIHSPSQVLPSGLPTSLSADSV-----SGKTLYPLSDFLTNSGYSANHIAFMAAILDS 984
Query: 795 LEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDGSI 854
EP F +A+ + W +AM +EI+ALE N TW + D P K I KWVYK+KY DG++
Sbjct: 985 NEPKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTL 1044
Query: 855 ERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLHAS 914
ER+KARLVV G Q EGVDF++TF+PVAK+TT+R ILA+ A++ W +HQ+DV NAFLH
Sbjct: 1045 ERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGD 1104
Query: 915 LDEQIYMTIPQGLVCNKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQSNADHTL 974
L+E++YM +P G C+ ++VC L+KSLYGLKQA R WF+ LS +L+ +G+ QS D++L
Sbjct: 1105 LEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSL 1164
Query: 975 YIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIARST 1034
+ + + +L+Y DD+++AGN++ I KS LH F +KDLG+ KYFLGLE++R
Sbjct: 1165 FSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGP 1224
Query: 1035 SGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYL 1094
G L+QRKYAL ++ ++G L KP + P+ + KL + G T+ YRRLVGR +YL
Sbjct: 1225 DGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYL 1284
Query: 1095 NTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAFSDS 1154
TRPD+++AV+ LSQF+ AP H +AA R+++YLKGSP G+F + SS + A+ DS
Sbjct: 1285 TITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDS 1344
Query: 1155 DWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCEIQWLHYLL 1214
D+ C TR+S++ Y ++LGDS ISW++KKQ T S SS E+EYRAMA T+ E++WL LL
Sbjct: 1345 DYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALL 1404
Query: 1215 QDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLVHLLPISTT 1274
+DL +P + D+++A+HIA NP +HERTKHIE DCH VR+ + L+ I T
Sbjct: 1405 KDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTE 1464
Query: 1275 LQTADVFTKSLTPAPFKTCISKLGMKD 1301
Q AD+ TKSL F+ +S LG+ D
Sbjct: 1465 DQVADLLTKSLPRPTFERLLSTLGVTD 1491
Score = 135 bits (341), Expect = 1e-31
Identities = 75/206 (36%), Positives = 113/206 (54%), Gaps = 5/206 (2%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQIL 613
PQQN VERKH+H+++VARA LFQ +LPV FW ++ A +LINR P+ VL K P+++L
Sbjct: 653 PQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELL 712
Query: 614 YNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVISI 673
+ P L+ FG LC+ ++ KF R+ KC+F+G+ K + YDL++ I
Sbjct: 713 FGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFA 772
Query: 674 SRNVTFHEHNPFKPLDSDLTPTQAFPTTLPPIFDDDIPVPATVQAQEPPVNNQNQVIAPR 733
SR+V FHE P + P PP+ +DD +P + Q V++ + +P
Sbjct: 773 SRDVRFHE--DIYPYATATQSNVPLPPPTPPMVNDDWFLPISTQVDSTNVDSSSS-SSPA 829
Query: 734 TSQRIRKPPSYLQDYHCTLLSSDSVP 759
S I +PP + T S++ VP
Sbjct: 830 QSGSIDQPPRSIDQSPST--STNPVP 853
>At1g47650 hypothetical protein
Length = 1409
Score = 505 bits (1301), Expect = e-143
Identities = 251/466 (53%), Positives = 326/466 (69%), Gaps = 6/466 (1%)
Query: 813 MDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDGSIERYKARLVVKGYTQVEGV 872
+ EI A+E TW + P K +GCKWV+ +K+ DGS+ERYKARLV KGYTQ EG+
Sbjct: 747 VSSEIGAMETTHTWEITTLPAGKKAVGCKWVFSLKFLADGSLERYKARLVAKGYTQKEGL 806
Query: 873 DFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLHASLDEQIYMTIPQGLVCNKA 932
D+ DTFSPVAKMTT++++L + AS+ W L QLDV NAFL+ L+E+IYM +P+G K
Sbjct: 807 DYTDTFSPVAKMTTIKLLLKISASKKWFLKQLDVSNAFLNGELEEEIYMKLPEGYAARKG 866
Query: 933 -----NQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQSNADHTLYIKASSGSFTALL 987
N VC L++S+YGLKQASRQWF SASL LG+K+++ DHTL+IK G F +L
Sbjct: 867 ITLPPNSVCRLKRSIYGLKQASRQWFKKFSASLLDLGFKKTHGDHTLFIKEYDGEFVIVL 926
Query: 988 LYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRKYALQ 1047
+Y DD+ +A + L +F+++DLG+ KYFLGLEIAR+ +GI + QRKYAL+
Sbjct: 927 VYVDDIAIASTSEGAAIQLTQDLQQRFKLRDLGDLKYFLGLEIARTEAGISICQRKYALE 986
Query: 1048 LISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQ 1107
L++ +G + KPVS PM + K+ G L D YRR+VG+L+YL TR DITFAVN+
Sbjct: 987 LLASTGMVNCKPVSVPMIPNVKMMKTDGDLLDDREQYRRIVGKLMYLTITRLDITFAVNK 1046
Query: 1108 LSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTRKSIT 1167
L QF SAP H QAA+RVL+Y+KGS G GLFY AS+ TL F+DSDWA C D+R+S T
Sbjct: 1047 LCQFSSAPRTSHLQAAYRVLQYIKGSVGQGLFYSASADLTLKGFADSDWASCPDSRRSTT 1106
Query: 1168 GYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQLAPTSM 1227
G+ +F+GDSLISWRSKKQ SRSS E+EYRA+A CE+ WLH LL L L P +
Sbjct: 1107 GFSMFVGDSLISWRSKKQHVVSRSSAEAEYRALALVTCELVWLHTLLMSLKASYLVPV-L 1165
Query: 1228 FRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLVHLLPIST 1273
+ D+ +A++IA NP +HERTKHIELDCH VREKL G + LL + T
Sbjct: 1166 YSDSTTAIYIATNPVFHERTKHIELDCHTVREKLDNGELKLLHVRT 1211
Score = 120 bits (300), Expect = 7e-27
Identities = 68/182 (37%), Positives = 96/182 (52%), Gaps = 36/182 (19%)
Query: 547 SHHLC*N-PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLD 605
S H C P+QN +VERKHQH+++V+RAL+FQ+ +P++ W V AV+LINR P+ +L
Sbjct: 602 SFHSCPETPEQNLVVERKHQHILNVSRALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLS 661
Query: 606 NKCPFQILYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYD 665
NK P++IL TVP R KF PR+ C+FLG+ KG+ D
Sbjct: 662 NKTPYEILTGTVP--------------FYFAKKRHKFQPRSKACVFLGYPAGYKGYKLMD 707
Query: 666 LKSRVISISRNVTFHEHNPFKPLDSDLTPTQAFPTTLPP-------IFDDDIPVPATVQA 718
L+S + ISRNV FHE + FP + P +F +PV + + A
Sbjct: 708 LESHTVFISRNVVFHE--------------EVFPLAVDPKSESSLKLFTPMVPVSSEIGA 753
Query: 719 QE 720
E
Sbjct: 754 ME 755
>At4g22040 LTR retrotransposon like protein
Length = 1109
Score = 503 bits (1295), Expect = e-142
Identities = 241/537 (44%), Positives = 367/537 (67%), Gaps = 1/537 (0%)
Query: 769 YPLSKVLSYDHLNPKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWIL 828
+P SK +S + +++F+ +++ +EPT ++EA+ + WR+AM EIE+L NQT+ +
Sbjct: 573 FPYSK-MSCNRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSI 631
Query: 829 VDKPPDSKPIGCKWVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLR 888
V+ PP + +G KWVYK+KY+ DG+IERYKARLVV G Q EGVD+ +TF+PVAKM+T+R
Sbjct: 632 VNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVR 691
Query: 889 VILALCASQ*WHLHQLDVDNAFLHASLDEQIYMTIPQGLVCNKANQVCLLQKSLYGLKQA 948
+ L + A++ WH+HQ+DV NAFLH L E++YM +PQG C+ ++VC L KSLYGLKQA
Sbjct: 692 LFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQA 751
Query: 949 SRQWFNTLSASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKS 1008
R WF+ LS++LK+ G+ QS +D++L+ + G F +L+Y DD++++G+ + KS
Sbjct: 752 PRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFKS 811
Query: 1009 SLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQ 1068
L F +KDLG KYFLG+E++R+ G L+QRKY L +IS+ G L ++P + P++ +
Sbjct: 812 YLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNH 871
Query: 1069 KLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLK 1128
KL + L+D YRRLVGRL+YL TRP+++++V+ L+QF+ P H AA RV++
Sbjct: 872 KLSLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVR 931
Query: 1129 YLKGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTA 1188
YLK +PG G+ ++S+ + + DSD+A C TR+S+TGY + LGD+ ISW++KKQ T
Sbjct: 932 YLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTI 991
Query: 1189 SRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTK 1248
SRSS E+EYRAMA E+ WL +L DL + +F D++SA+ ++ NP HERTK
Sbjct: 992 SRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTK 1051
Query: 1249 HIELDCHIVREKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDIHLP 1305
H+E+DCH +R+ + G++ + + Q AD+ TK+L + + KLG+ D+H P
Sbjct: 1052 HVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHAP 1108
Score = 124 bits (312), Expect = 3e-28
Identities = 53/128 (41%), Positives = 84/128 (65%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQIL 613
P QN VERKH+H++++ARAL FQ++LP+ FW + A YLINR P+ +L K P+++L
Sbjct: 443 PHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEML 502
Query: 614 YNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVISI 673
Y T P ++L++FG+LC+ KF R+ +C+F+G+ KG+ +DL+ + +
Sbjct: 503 YKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFV 562
Query: 674 SRNVTFHE 681
SR+V F E
Sbjct: 563 SRDVIFQE 570
>At2g24660 putative retroelement pol polyprotein
Length = 1156
Score = 500 bits (1288), Expect = e-141
Identities = 280/671 (41%), Positives = 402/671 (59%), Gaps = 46/671 (6%)
Query: 654 FKPDTKGFVTYDLKSRVISISRNVTFHEHNPFKPLDSDLTPTQAFPTTLPPIFDDDIPVP 713
F+PD+ V + + SR + P K L S T Q DD +
Sbjct: 489 FEPDSDSDVAPASIASDLQNSRVDSSDSSTPDKNLASGDTLAQ---------IDDSPDIV 539
Query: 714 ATVQAQEPPVNNQNQVIAPRTSQRIRK----PPSYLQDY---HCTL--LSSDSVPITSSS 764
+T P+ + TS R RK LQDY + T+ ++ ++P +SS
Sbjct: 540 STPNRNNQPLFVVDSPFVEATSPRQRKRQIRQSVRLQDYVLYNATVSPINPHALPDSSSQ 599
Query: 765 -------TGINYPLSKVLSYDHLNPKYQSFVMNISSSLEPTRFSEAVKHECWRKAMDQEI 817
T YPLS +S D + +++F+ I+++ EP F EAV+ + W AM +E+
Sbjct: 600 SSSMVQGTSSLYPLSDYVSDDCFSAGHKAFLAAITANDEPKHFKEAVRIKVWNDAMFKEV 659
Query: 818 EALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDGSIERYKARLVVKGYTQVEGVDFQDT 877
+ALE N+TW +VD PP IG +WVYK KY DGSIERYKARLVV+G QVEG D+ +T
Sbjct: 660 DALEINKTWDIVDLPPGKVAIGSQWVYKTKYNADGSIERYKARLVVQGNKQVEGEDYNET 719
Query: 878 FSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLHASLDEQIYMTIPQGLVCNKANQVCL 937
F+PV KMTT+R +L L A+ W ++Q+DV+NAFLH LDE++YM +P G + ++VC
Sbjct: 720 FAPVVKMTTVRTLLRLVAANQWEVYQMDVNNAFLHGDLDEEVYMKLPPGFRHSHPDKVCR 779
Query: 938 LQKSLYGLKQASRQWFNTLSASLKKLGYKQSNADHTLYIKASSGSFTALLLYADDVLLAG 997
L+KSLYGLKQA R WF LS +L + G+ Q + D++ + +G +L+Y DD+L+ G
Sbjct: 780 LRKSLYGLKQAPRCWFKKLSDALLRFGFVQGHEDYSFFSYTRNGIELRVLVYVDDLLICG 839
Query: 998 NDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLAS 1057
ND + +Q K L F +KDLG+ KYFLG+E++R + GI L+QRKYAL +I+DSG+L
Sbjct: 840 NDGYMLQKFKEYLGRCFSMKDLGKLKYFLGIEVSRGSEGIFLSQRKYALDIITDSGNLGC 899
Query: 1058 KPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTD 1117
+P TP++ + L T+ G L D YRRLVGRLLYL TRP+++++V+ LSQF+ P +
Sbjct: 900 RPALTPLEQNHHLATDDGPLLADAKPYRRLVGRLLYLLHTRPELSYSVHVLSQFMQTPRE 959
Query: 1118 IHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSL 1177
H AA R++++LKGSPG G+ A + L + DSD+ C TR+S++ Y + LG S
Sbjct: 960 AHLAAAMRIVRFLKGSPGQGILLNADTELQLDVYCDSDFQTCPKTRRSLSAYVVLLGGSP 1019
Query: 1178 ISWRSKKQSTASRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHI 1237
ISW++KKQ T S SS E+EYRAM+ + EI+WL LL++L
Sbjct: 1020 ISWKTKKQDTVSHSSAEAEYRAMSVALREIKWLRKLLKEL-------------------- 1059
Query: 1238 AHNPSYHERTKHIELDCHIVREKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKL 1297
NP +HERTKHIE DCH VR+ ++ G++ + T Q AD+FTK+L + F +SKL
Sbjct: 1060 -ANPVFHERTKHIESDCHSVRDAVRDGIITTHHVRTNEQLADIFTKALGRSQFLYLMSKL 1118
Query: 1298 GMKDIHLPV*G 1308
G++D+H P G
Sbjct: 1119 GIQDLHTPTNG 1129
Score = 127 bits (319), Expect = 4e-29
Identities = 63/163 (38%), Positives = 100/163 (60%), Gaps = 5/163 (3%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQIL 613
PQQN VERKH+H+++VARA+LFQA LP+ FW AV A YLINR PT + + P++IL
Sbjct: 241 PQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTSLHNGLSPYEIL 300
Query: 614 YNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVISI 673
+N+ P+ +L++FG+ C+V + + KF R+ C+F+G+ KG+ +D++ + +
Sbjct: 301 HNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWKVFDMEKKEFLV 360
Query: 674 SRNVTFHEH-NPFKPLDSDLTPTQAFPTTLPPIFDDDIPVPAT 715
SR+V F E P+ ++D + P + D+D V T
Sbjct: 361 SRDVVFREDVFPYAATNTD----HVSASPAPLLVDEDWMVSTT 399
>At3g61330 copia-type polyprotein
Length = 1352
Score = 487 bits (1254), Expect = e-137
Identities = 269/748 (35%), Positives = 415/748 (54%), Gaps = 31/748 (4%)
Query: 553 NPQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQI 612
+PQQN +VERK++ ++ +AR++L LP W+ AVA AVYL+NR PT + K P +
Sbjct: 624 SPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEA 683
Query: 613 LYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVIS 672
P +++L++FG++ R K D ++ K IF+G+ ++KG+ Y+ ++
Sbjct: 684 WSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTI 743
Query: 673 ISRNVTFHEHNPFKPLDSDLTPTQAFPTTLPPIFDDDIPVPATVQAQEPPVNNQNQVIAP 732
ISRN+ F E + +S+ FP F++D P P +EPP
Sbjct: 744 ISRNIVFDEEGEWD-WNSNEEDYNFFPH-----FEEDEPEPTR---EEPPSEEPTTPPTS 794
Query: 733 RTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLNPKYQSFVMNIS 792
TS +I + SS+ P S + Y+ + + +
Sbjct: 795 PTSSQIEES------------SSERTPRFRSIQEL---------YEVTENQENLTLFCLF 833
Query: 793 SSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDG 852
+ EP F +A++ + WR AMD+EI+++++N TW L P K IG KWVYK K G
Sbjct: 834 AECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKG 893
Query: 853 SIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLH 912
+ERYKARLV KGY+Q G+D+ + F+PVA++ T+R+I++L A W +HQ+DV +AFL+
Sbjct: 894 EVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLN 953
Query: 913 ASLDEQIYMTIPQG-LVCNKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQSNAD 971
L+E++Y+ PQG +V + ++V L+K LYGLKQA R W + K+ + + +
Sbjct: 954 GDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013
Query: 972 HTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIA 1031
H LYIK LY DD++ GN+ + K + +F + D+G Y+LG+E+
Sbjct: 1014 HALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVK 1073
Query: 1032 RSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRL 1091
+ +GI + Q YA +++ S PV TPM+ KL D +++ LVG L
Sbjct: 1074 QEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSL 1133
Query: 1092 LYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAF 1151
YL TRPDI +AV +S+++ PT H +AA R+L+Y+KG+ GL Y +S L +
Sbjct: 1134 RYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGY 1193
Query: 1152 SDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCEIQWLH 1211
SDSDW G +D RKS +G+ ++GD+ +W SKKQ + S+CE+EY A + VC WL
Sbjct: 1194 SDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLR 1253
Query: 1212 YLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLVHLLPI 1271
LL++L+ PQ PT +F DN+SA+ +A NP +H+R+KHI+ H +RE + + V L +
Sbjct: 1254 NLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYV 1313
Query: 1272 STTLQTADVFTKSLTPAPFKTCISKLGM 1299
T Q AD FTK L F S LG+
Sbjct: 1314 KTHDQVADFFTKPLKRENFIKMRSLLGV 1341
>At2g15920 putative retroelement pol polyprotein
Length = 1100
Score = 487 bits (1254), Expect = e-137
Identities = 265/585 (45%), Positives = 362/585 (61%), Gaps = 38/585 (6%)
Query: 725 NQNQVIAPRTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLNPKY 784
+Q V + T R+RKP ++L DY C SD YP+S +SY ++P +
Sbjct: 538 DQKLVSSWDTRLRVRKPSTHLSDYVCKNTQSDQ----------KYPISSTISYSQISPSH 587
Query: 785 QSFVMNISSSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVY 844
++ NI+ L T F EA + W +A+D EI A+E W + P D K +GCKWV+
Sbjct: 588 MCYIDNITKILISTNFPEAQGTKEWCEAVDVEIGAMESTNKWEITTLPKDKKAVGCKWVF 647
Query: 845 KVKYKQDGSIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQL 904
+K DGS+ERYKARLV KGYTQ EG+D+ +TFSPVAKMTT++++L + AS+ W L QL
Sbjct: 648 TLKILADGSLERYKARLVAKGYTQKEGLDYTNTFSPVAKMTTIKLLLKIYASKKWFLKQL 707
Query: 905 DVDNAFLHASLDEQIYMTIPQGLVCNK-----ANQVCLLQKSLYGLKQASRQWFNTLSAS 959
DV N+FL+ L+E+IYM +P+G K +N VC L++S+YGLKQASRQWF SAS
Sbjct: 708 DVSNSFLNGELEEEIYMKLPEGSAERKGIILPSNAVCRLKRSIYGLKQASRQWFKKFSAS 767
Query: 960 LKKLGYKQSNADHTLYIKASSGSFTA--LLLYADDVLLAGNDMHEIQLVKSSLHDQFRIK 1017
L LG+ + + DHTL++ G + +L+Y DD+++A + LH+ F+++
Sbjct: 768 LLSLGFFKIHGDHTLFLIDCGGEYVVVLVLVYVDDIVIASTN--------EDLHNLFKLR 819
Query: 1018 DLGEAKYFLGLEIARSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTP 1077
DLG+ KYFL LEI+R+ GI L RK A +L++ G + KPVS PM + KL G
Sbjct: 820 DLGDLKYFLCLEISRTEVGISLCHRKNAWELLASIGMINCKPVSVPMITNVKLMKADGEL 879
Query: 1078 LTDIGSYRRLVGRLLYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSG 1137
L D YRR+VG+L+ L TRPDIT H QAAHRVL+Y+KG G G
Sbjct: 880 LEDREQYRRIVGKLMDLTITRPDITLRTT------------HLQAAHRVLQYIKGIVGQG 927
Query: 1138 LFYPASSSTTLTAFSDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEY 1197
LFY ASS TL F+DSDW C D+R+S TG+ +F+GDSLIS RSKKQ SRSS E+EY
Sbjct: 928 LFYSASSDLTLKGFADSDWVSCADSRRSTTGFTMFVGDSLISLRSKKQRVVSRSSAEAEY 987
Query: 1198 RAMATTVCEIQWLHYLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIV 1257
RA+A CE+ LH LL L P +F ++ +A++IA NP +HERTKH E+DC+ V
Sbjct: 988 RALALATCELVSLHTLLVSLTAATSVPI-LFSNSTTAIYIAINPVFHERTKHTEIDCNTV 1046
Query: 1258 REKLQQGLVHLLPISTTLQTADVFTKSLTPAPFKTCISKLGMKDI 1302
REK+ G + LL + T Q AD+ TK L+P F+ K+ + +I
Sbjct: 1047 REKVDDGELKLLHVRTEDQVADIMTKPLSPHQFEHLKFKMSILNI 1091
>At1g48710 hypothetical protein
Length = 1352
Score = 486 bits (1252), Expect = e-137
Identities = 268/748 (35%), Positives = 413/748 (54%), Gaps = 31/748 (4%)
Query: 553 NPQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVLDNKCPFQI 612
+PQQN + ERK++ ++ +AR++L LP W+ AVA AVYL+NR PT + K P +
Sbjct: 624 SPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEA 683
Query: 613 LYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVIS 672
+++L++FG++ R K D ++ K IF+G+ ++KG+ Y+ ++
Sbjct: 684 WSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTI 743
Query: 673 ISRNVTFHEHNPFKPLDSDLTPTQAFPTTLPPIFDDDIPVPATVQAQEPPVNNQNQVIAP 732
ISRN+ F E + +S+ FP F++D P P +EPP
Sbjct: 744 ISRNIVFDEEGEWD-WNSNEEDYNFFPH-----FEEDEPEPTR---EEPPSEEPTTPPTS 794
Query: 733 RTSQRIRKPPSYLQDYHCTLLSSDSVPITSSSTGINYPLSKVLSYDHLNPKYQSFVMNIS 792
TS +I + SS+ P S + Y+ + + +
Sbjct: 795 PTSSQIEES------------SSERTPRFRSIQEL---------YEVTENQENLTLFCLF 833
Query: 793 SSLEPTRFSEAVKHECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDG 852
+ EP F EA++ + WR AMD+EI+++++N TW L P K IG KWVYK K G
Sbjct: 834 AECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKG 893
Query: 853 SIERYKARLVVKGYTQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLH 912
+ERYKARLV KGY Q G+D+ + F+PVA++ T+R+I++L A W +HQ+DV +AFL+
Sbjct: 894 EVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLN 953
Query: 913 ASLDEQIYMTIPQG-LVCNKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQSNAD 971
L+E++Y+ PQG +V + ++V L+K+LYGLKQA R W + K+ + + +
Sbjct: 954 GDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013
Query: 972 HTLYIKASSGSFTALLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIA 1031
H LYIK LY DD++ GN+ + K + +F + D+G Y+LG+E+
Sbjct: 1014 HALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVK 1073
Query: 1032 RSTSGIVLNQRKYALQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRL 1091
+ +GI + Q YA +++ S PV TPM+ KL D +++ LVG L
Sbjct: 1074 QEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSL 1133
Query: 1092 LYLNTTRPDITFAVNQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAF 1151
YL TRPDI +AV +S+++ PT H +AA R+L+Y+KG+ GL Y +S L +
Sbjct: 1134 RYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGY 1193
Query: 1152 SDSDWAGCIDTRKSITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCEIQWLH 1211
SDSDW G +D RKS +G+ ++GD+ +W SKKQ S+CE+EY A + VC WL
Sbjct: 1194 SDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLR 1253
Query: 1212 YLLQDLNQPQLAPTSMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLVHLLPI 1271
LL++L+ PQ PT +F DN+SA+ +A NP +H+R+KHI+ H +RE + + V L +
Sbjct: 1254 NLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYV 1313
Query: 1272 STTLQTADVFTKSLTPAPFKTCISKLGM 1299
T Q AD+FTK L F S LG+
Sbjct: 1314 KTHDQVADIFTKPLKREDFIKMRSLLGV 1341
>At4g27210 putative protein
Length = 1318
Score = 483 bits (1242), Expect = e-136
Identities = 283/794 (35%), Positives = 426/794 (53%), Gaps = 49/794 (6%)
Query: 554 PQQNAIVERKHQHVISVARALLFQAHLPVTFWSYAVAHAVYLINRLPTPVL-DNKCPFQI 612
PQQN + ERKH+H++ + ++LFQ+H+P FW A A +LIN LPT L ++ P++
Sbjct: 425 PQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALKESISPYEK 484
Query: 613 LYNTVPDITNLKIFGTLCFVSTLTSHRKKFDPRATKCIFLGFKPDTKGFVTYDLKSRVIS 672
LY+ PD T+L+ FG+ CF + KF+P + KC+FLG+ KG+ + +
Sbjct: 485 LYDKKPDYTSLRSFGSACFPTLRDYAENKFNPCSLKCVFLGYNEKYKGYRCLYPPTGRLY 544
Query: 673 ISRNVTFHEH-NPFKPLDSDLTPTQAFPTTLPPIFDDDIPVPAT-----------VQAQE 720
ISR+V F E PF L P P + D P P+T A
Sbjct: 545 ISRHVIFDESVYPFSHTYKHLHPQPRTPLLAAWLRSSDSPAPSTSTSPSSRSPLFTSADF 604
Query: 721 PPVNNQNQVIAPR--------------TSQRIRKPPSYLQDY---------HCTLLSSDS 757
PP+ + + P T Q D+ H + SDS
Sbjct: 605 PPLPQRKTPLLPTLVPISSVSHASNITTQQSPDFDSERTTDFDSASIGDSSHSSQAGSDS 664
Query: 758 ----------VPITSSSTGINYPLSKV-LSYDHLNPKYQSFVMNISSSLEPTRFSEAVKH 806
V T +ST ++ +++ + NP+Y F+ + S EP + A+KH
Sbjct: 665 EETIQQASVNVHQTHASTNVHPMVTRAKVGISKPNPRYV-FLSHKVSYPEPKTVTAALKH 723
Query: 807 ECWRKAMDQEIEALERNQTWILVDKPPDSKPIGCKWVYKVKYKQDGSIERYKARLVVKGY 866
W AM +EI QTW LV D +G KWV++ K DG++ + KAR+V KG+
Sbjct: 724 PGWTGAMTEEIGNCSETQTWSLVPYKSDMHVLGSKWVFRTKLHADGTLNKLKARIVAKGF 783
Query: 867 TQVEGVDFQDTFSPVAKMTTLRVILALCASQ*WHLHQLDVDNAFLHASLDEQIYMTIPQG 926
Q EG+D+ +T+SPV + T+R++L L + W + Q+DV NAFLH L E +YMT P G
Sbjct: 784 LQEEGIDYLETYSPVVRTPTVRLVLHLATALNWDIKQMDVKNAFLHGDLKETVYMTQPAG 843
Query: 927 LVC-NKANQVCLLQKSLYGLKQASRQWFNTLSASLKKLGYKQSNADHTLYIKASSGSFTA 985
V +K + VCLL KS+YGLKQ+ R WF+ S L + G+ S +D +L+I A + +
Sbjct: 844 FVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPSLFIYAHNNNLIL 903
Query: 986 LLLYADDVLLAGNDMHEIQLVKSSLHDQFRIKDLGEAKYFLGLEIARSTSGIVLNQRKYA 1045
LLLY DD+++ GN + + ++L+ +FR+ D+G+ YFLG+++ R +G+ ++Q+KYA
Sbjct: 904 LLLYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQVQRQQNGLFMSQQKYA 963
Query: 1046 LQLISDSGHLASKPVSTPMDNSQKLGTNIGTPLTDIGSYRRLVGRLLYLNTTRPDITFAV 1105
L+ + P+ TP+ + +D +R + G+L YL TRPDI FAV
Sbjct: 964 EDLLIAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQYLTLTRPDIQFAV 1023
Query: 1106 NQLSQFLSAPTDIHEQAAHRVLKYLKGSPGSGLFYPASSSTTLTAFSDSDWAGCIDTRKS 1165
N + Q + PT R+L+Y+KG+ G+ Y S T L A+SDSDW C TR+S
Sbjct: 1024 NFVCQKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQAYSDSDWGNCKQTRRS 1083
Query: 1166 ITGYCLFLGDSLISWRSKKQSTASRSSCESEYRAMATTVCEIQWLHYLLQDLNQPQLAPT 1225
+ G C F+G +L+SW SKK T SRSS E+EY++++ EI WL LL++L P
Sbjct: 1084 VGGLCTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLPDTP 1143
Query: 1226 SMFRDNQSAMHIAHNPSYHERTKHIELDCHIVREKLQQGLVHLLPISTTLQTADVFTKSL 1285
+F DN SA+++ NP++H RTKH ++D H VRE++ + + I + Q AD+FTKSL
Sbjct: 1144 ELFCDNLSAVYLTANPAFHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFTKSL 1203
Query: 1286 TPAPFKTCISKLGM 1299
F KLG+
Sbjct: 1204 PYEAFIHLRGKLGV 1217
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.339 0.148 0.479
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,476,869
Number of Sequences: 26719
Number of extensions: 1069724
Number of successful extensions: 4298
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3784
Number of HSP's gapped (non-prelim): 262
length of query: 1310
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1199
effective length of database: 8,352,787
effective search space: 10014991613
effective search space used: 10014991613
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0033b.8