BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0033b.6
(717 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g37040 phenylalanine ammonia lyase (PAL1) 1177 0.0
At3g53260 phenylalanine ammonia-lyase 1165 0.0
At3g10340 putative phenylalanine ammonia-lyase 1114 0.0
At5g04230 phenylalanine ammonia-lyase PAL3 988 0.0
At2g11140 putative retroelement pol polyprotein 32 0.95
At1g54230 hypothetical protein 32 1.2
At3g61770 unknown protein 32 1.6
At2g47250 putative pre-mRNA splicing factor RNA helicase 32 1.6
At1g21880 receptor-like GPI-anchored protein (lysM) 1 31 2.8
At1g80030 unknown protein 30 3.6
At1g17930 unknown protein 30 3.6
At3g62310 ATP-dependent RNA helicase-like protein 30 4.7
At3g48560 acetolactate synthase 30 4.7
At1g22260 hypothetical protein 30 4.7
At4g13450 hypothetical protein 29 8.1
At3g03790 unknown protein 29 8.1
>At2g37040 phenylalanine ammonia lyase (PAL1)
Length = 725
Score = 1177 bits (3046), Expect = 0.0
Identities = 578/699 (82%), Positives = 643/699 (91%)
Query: 19 NGTATATDPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLGGETLTIAQVAAIAANEQG 78
N A DPL+WG AAE MKGSHL+EVKRMVAE+RKPVV LGGETLTI QVAAI+
Sbjct: 27 NMVINAEDPLNWGAAAEQMKGSHLDEVKRMVAEFRKPVVNLGGETLTIGQVAAISTIGNS 86
Query: 79 VSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKNGNALQLELIRFLN 138
V VEL E+ARAGV ASSDWVM SMN GTDSYGVTTGFGATSHRRTKNG ALQ ELIRFLN
Sbjct: 87 VKVELSETARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGVALQKELIRFLN 146
Query: 139 AGIFGNGTESTHTLPQPATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNITPCLPLR 198
AGIFG+ E++HTLP ATRAAMLVRINTLLQG+SGIRFEILEAIT +NNNITP LPLR
Sbjct: 147 AGIFGSTKETSHTLPHSATRAAMLVRINTLLQGFSGIRFEILEAITSFLNNNITPSLPLR 206
Query: 199 GTVTASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKNAFQLAGIDSGFFELQPKEGLA 258
GT+TASGDLVPLSYIAGLLTGRPNSKA GP+GE L A+ AF+LAGI SGFF+LQPKEGLA
Sbjct: 207 GTITASGDLVPLSYIAGLLTGRPNSKATGPNGEALTAEEAFKLAGISSGFFDLQPKEGLA 266
Query: 259 LVNGTAVGSGLASIVLFDANVLAILAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEA 318
LVNGTAVGSG+AS+VLF+ NVL++LAE+LSA+FAEVM GKPEFTDHLTH+LKHHPGQIEA
Sbjct: 267 LVNGTAVGSGMASMVLFETNVLSVLAEILSAVFAEVMSGKPEFTDHLTHRLKHHPGQIEA 326
Query: 319 AAIMEHILDGSSYMKAAKKLHEVDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIERE 378
AAIMEHILDGSSYMK A+KLHE+DPLQKPKQDRYALRTSPQWLGP IEVIR++TKSIERE
Sbjct: 327 AAIMEHILDGSSYMKLAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRYATKSIERE 386
Query: 379 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALAAIGKLMFAQFTELVDDHYNN 438
INSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLA+AAIGKLMFAQF+ELV+D YNN
Sbjct: 387 INSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNN 446
Query: 439 GLPSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLIS 498
GLPSNLTASRNPSLDYG KGAEIAMASYCSELQYLANPVT+HVQSAEQHNQDVNSLGLIS
Sbjct: 447 GLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLIS 506
Query: 499 SRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKYSVKSTVSQVVKRTLTTGVNGELH 558
SRKT+EA++ILKLMS+TFL+A+CQA+DLRHLEENL+ +VK+TVSQV K+ LTTGVNGELH
Sbjct: 507 SRKTSEAVDILKLMSTTFLVAICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGVNGELH 566
Query: 559 PSRFCEKDLLKVVDRETLFSYIDDPCSATYPLMQKLRQVLVDHALVNGENEKDSKTSIFQ 618
PSRFCEKDLLKVVDRE +++Y DDPCSATYPL+QKLRQV+VDHAL+NGE+EK++ TSIF
Sbjct: 567 PSRFCEKDLLKVVDREQVYTYADDPCSATYPLIQKLRQVIVDHALINGESEKNAVTSIFH 626
Query: 619 KIATFEDELKSLLPKEVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLTGEK 678
KI FE+ELK++LPKEVE+ARAAY++G IPN+I ECRSYPLY+FVREELGTELLTGEK
Sbjct: 627 KIGAFEEELKAVLPKEVEAARAAYDNGTSAIPNRIKECRSYPLYRFVREELGTELLTGEK 686
Query: 679 TRSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 717
SPGEE DK+FTAIC+GKIIDP++ECL EWNGAP+PIC
Sbjct: 687 VTSPGEEFDKVFTAICEGKIIDPMMECLNEWNGAPIPIC 725
>At3g53260 phenylalanine ammonia-lyase
Length = 717
Score = 1165 bits (3015), Expect = 0.0
Identities = 573/697 (82%), Positives = 639/697 (91%)
Query: 21 TATATDPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLGGETLTIAQVAAIAANEQGVS 80
T T DPL+WG+AA+ MKGSHL+EVK+MV EYR+PVV LGGETLTI QVAAI+ V
Sbjct: 21 TKTLADPLNWGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVK 80
Query: 81 VELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKNGNALQLELIRFLNAG 140
VEL E++RAGVKASSDWVM SMN GTDSYGVTTGFGATSHRRTKNG ALQ ELIRFLNAG
Sbjct: 81 VELAETSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAG 140
Query: 141 IFGNGTESTHTLPQPATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNITPCLPLRGT 200
IFGN E+ HTLPQ ATRAAMLVR+NTLLQGYSGIRFEILEAIT L+N+NI+P LPLRGT
Sbjct: 141 IFGNTKETCHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITSLLNHNISPSLPLRGT 200
Query: 201 VTASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKNAFQLAGIDSGFFELQPKEGLALV 260
+TASGDLVPLSYIAGLLTGRPNSKA GP GE L AK AF+ AGI +GFF+LQPKEGLALV
Sbjct: 201 ITASGDLVPLSYIAGLLTGRPNSKATGPDGESLTAKEAFEKAGISTGFFDLQPKEGLALV 260
Query: 261 NGTAVGSGLASIVLFDANVLAILAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAA 320
NGTAVGSG+AS+VLF+ANV A+LAEVLSAIFAEVM GKPEFTDHLTH+LKHHPGQIEAAA
Sbjct: 261 NGTAVGSGMASMVLFEANVQAVLAEVLSAIFAEVMSGKPEFTDHLTHRLKHHPGQIEAAA 320
Query: 321 IMEHILDGSSYMKAAKKLHEVDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREIN 380
IMEHILDGSSYMK A+K+HE+DPLQKPKQDRYALRTSPQWLGP IEVIR +TKSIEREIN
Sbjct: 321 IMEHILDGSSYMKLAQKVHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRQATKSIEREIN 380
Query: 381 SVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALAAIGKLMFAQFTELVDDHYNNGL 440
SVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDNTRLA+AAIGKLMFAQF+ELV+D YNNGL
Sbjct: 381 SVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGL 440
Query: 441 PSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISSR 500
PSNLTAS NPSLDYG KGAEIAMASYCSELQYLANPVT+HVQSAEQHNQDVNSLGLISSR
Sbjct: 441 PSNLTASSNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSR 500
Query: 501 KTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKYSVKSTVSQVVKRTLTTGVNGELHPS 560
KT+EA++ILKLMS+TFL+ +CQA+DLRHLEENL+ +VK+TVSQV K+ LTTG+NGELHPS
Sbjct: 501 KTSEAVDILKLMSTTFLVGICQAVDLRHLEENLRQTVKNTVSQVAKKVLTTGINGELHPS 560
Query: 561 RFCEKDLLKVVDRETLFSYIDDPCSATYPLMQKLRQVLVDHALVNGENEKDSKTSIFQKI 620
RFCEKDLLKVVDRE +F+Y+DDPCSATYPLMQ+LRQV+VDHAL NGE EK++ TSIFQKI
Sbjct: 561 RFCEKDLLKVVDREQVFTYVDDPCSATYPLMQRLRQVIVDHALSNGETEKNAVTSIFQKI 620
Query: 621 ATFEDELKSLLPKEVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLTGEKTR 680
FE+ELK++LPKEVE+ARAAY +G IPN+I ECRSYPLY+FVREELGT+LLTGEK
Sbjct: 621 GAFEEELKAVLPKEVEAARAAYGNGTAPIPNRIKECRSYPLYRFVREELGTKLLTGEKVV 680
Query: 681 SPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 717
SPGEE DK+FTA+C+GK+IDPL++CL EWNGAP+PIC
Sbjct: 681 SPGEEFDKVFTAMCEGKLIDPLMDCLKEWNGAPIPIC 717
>At3g10340 putative phenylalanine ammonia-lyase
Length = 707
Score = 1114 bits (2882), Expect = 0.0
Identities = 558/698 (79%), Positives = 614/698 (87%), Gaps = 2/698 (0%)
Query: 21 TATATDPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLGGETLTIAQVAAIAANEQGVS 80
TA + DPL+W AE++KGSHL+EVKRMV EYRK VKLGGETLTI QVAA+A G +
Sbjct: 11 TAVSGDPLNWNATAEALKGSHLDEVKRMVKEYRKEAVKLGGETLTIGQVAAVARGGGGST 70
Query: 81 VELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKNGNALQLELIRFLNAG 140
VEL E ARAGVKASS+WVM SMN GTDSYGVTTGFGATSHRRTK G ALQ ELIRFLNAG
Sbjct: 71 VELAEEARAGVKASSEWVMESMNRGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAG 130
Query: 141 IFGNGT-ESTHTLPQPATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNITPCLPLRG 199
IFG G +++HTLP+P TRAAMLVR+NTLLQGYSGIRFEILEAITKL+N+ ITPCLPLRG
Sbjct: 131 IFGPGAGDTSHTLPKPTTRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHEITPCLPLRG 190
Query: 200 TVTASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKNAFQLAGIDSGFFELQPKEGLAL 259
T+TASGDLVPLSYIAGLLTGRPNSKAVGPSGE L A AF+LAG+ S FFELQPKEGLAL
Sbjct: 191 TITASGDLVPLSYIAGLLTGRPNSKAVGPSGETLTASEAFKLAGVSS-FFELQPKEGLAL 249
Query: 260 VNGTAVGSGLASIVLFDANVLAILAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAA 319
VNGTAVGSGLAS VLFDAN+LA+L+EV+SA+FAEVMQGKPEFTDHLTHKLKHHPGQIEAA
Sbjct: 250 VNGTAVGSGLASTVLFDANILAVLSEVMSAMFAEVMQGKPEFTDHLTHKLKHHPGQIEAA 309
Query: 320 AIMEHILDGSSYMKAAKKLHEVDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREI 379
AIMEHILDGSSY+K A+ LHE+DPLQKPKQDRYALRTSPQWLGP IEVIR +TK IEREI
Sbjct: 310 AIMEHILDGSSYVKEAQLLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREI 369
Query: 380 NSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALAAIGKLMFAQFTELVDDHYNNG 439
NSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDN+RLA+A+IGKLMFAQF+ELV+D YNNG
Sbjct: 370 NSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNSRLAIASIGKLMFAQFSELVNDFYNNG 429
Query: 440 LPSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGLISS 499
LPSNL+ RNPSLDYG KGAEIAMASYCSELQ+LANPVT HVQSAEQHNQDVNSLGLISS
Sbjct: 430 LPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISS 489
Query: 500 RKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKYSVKSTVSQVVKRTLTTGVNGELHP 559
RKT EA++ILKLMS+T+L+ALCQA+DLRHLEENLK +VKS VSQV KR LT G NGELHP
Sbjct: 490 RKTAEAVDILKLMSTTYLVALCQAVDLRHLEENLKKAVKSAVSQVAKRVLTVGANGELHP 549
Query: 560 SRFCEKDLLKVVDRETLFSYIDDPCSATYPLMQKLRQVLVDHALVNGENEKDSKTSIFQK 619
SRF E+D+L+VVDRE +FSY DDPCS TYPLMQKLR +LVDHAL + E E +S TS+F K
Sbjct: 550 SRFTERDVLQVVDREYVFSYADDPCSLTYPLMQKLRHILVDHALADPEREANSATSVFHK 609
Query: 620 IATFEDELKSLLPKEVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLTGEKT 679
I FE ELK LLPKEVE R YE G I N+I ECRSYPLY+FVR+EL TELLTGE
Sbjct: 610 IGAFEAELKLLLPKEVERVRVEYEEGTSAIANRIKECRSYPLYRFVRDELNTELLTGENV 669
Query: 680 RSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 717
RSPGEE DK+F AI GK+IDPLLECL EWNGAP+ IC
Sbjct: 670 RSPGEEFDKVFLAISDGKLIDPLLECLKEWNGAPVSIC 707
>At5g04230 phenylalanine ammonia-lyase PAL3
Length = 694
Score = 988 bits (2553), Expect = 0.0
Identities = 510/702 (72%), Positives = 577/702 (81%), Gaps = 17/702 (2%)
Query: 19 NGTATATDPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLGGETLTIAQVAAIAANEQG 78
N TA + DPL+W VAAE++KGSHL EVK+MV +YRK V+LGGETLTI QVAA+A+ G
Sbjct: 7 NATALS-DPLNWNVAAEALKGSHLEEVKKMVKDYRKGTVQLGGETLTIGQVAAVASG--G 63
Query: 79 VSVELCESARAGVKASSDWVMNSMNNGTDSYGVTTGFGATSHRRTKNGNALQLELIRFLN 138
+VEL E AR GVKASSDWVM SMN TD+YG+TTGFG++S RRT G ALQ ELIR+LN
Sbjct: 64 PTVELSEEARGGVKASSDWVMESMNRDTDTYGITTGFGSSSRRRTDQGAALQKELIRYLN 123
Query: 139 AGIFGNGTES---THTLPQPATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNITPCL 195
AGIF G E ++TLP+PATRAAML+R+NTLLQGYSGIRFEILEAIT L+N ITP L
Sbjct: 124 AGIFATGNEDDDRSNTLPRPATRAAMLIRVNTLLQGYSGIRFEILEAITTLLNCKITPLL 183
Query: 196 PLRGTVTASGDLVPLSYIAGLLTGRPNSKAVGPSGEVLNAKNAFQLAGIDSGFFELQPKE 255
PLRGT+TASGDLVPLSYIAG L GRPNS++VGPSGE+L A AF+LAG+ S FFEL+PKE
Sbjct: 184 PLRGTITASGDLVPLSYIAGFLIGRPNSRSVGPSGEILTALEAFKLAGVSS-FFELRPKE 242
Query: 256 GLALVNGTAVGSGLASIVLFDANVLAILAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQ 315
GLALVNGTAVGS LAS VL+DAN+L + +EV SA+FAEVMQGKPEFTDHLTHKLKHHPGQ
Sbjct: 243 GLALVNGTAVGSALASTVLYDANILVVFSEVASAMFAEVMQGKPEFTDHLTHKLKHHPGQ 302
Query: 316 IEAAAIMEHILDGSSYMKAAKKLHEVDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSI 375
IEAAAIMEHILDGSSY+K A LH++DPLQKPKQDRYALRTSPQWLGP IEVIR +TK I
Sbjct: 303 IEAAAIMEHILDGSSYVKEALHLHKIDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMI 362
Query: 376 EREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALAAIGKLMFAQFTELVDDH 435
EREINSVNDNPLIDVSRNKA+HGGNFQGTPIGV+MDNTRLALA+IGKLMFAQFTELV+D
Sbjct: 363 EREINSVNDNPLIDVSRNKAIHGGNFQGTPIGVAMDNTRLALASIGKLMFAQFTELVNDF 422
Query: 436 YNNGLPSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLG 495
YNNGLPSNL+ RNPSLDYGLKGAE+AMASYCSELQ+LANPVT HV+SA QHNQDVNSLG
Sbjct: 423 YNNGLPSNLSGGRNPSLDYGLKGAEVAMASYCSELQFLANPVTNHVESASQHNQDVNSLG 482
Query: 496 LISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKYSVKSTVSQVVKRTLTTGVNG 555
LISSR T EA+ ILKLMS+T+L+ALCQA DLRHLEE LK +V VS K L
Sbjct: 483 LISSRTTAEAVVILKLMSTTYLVALCQAFDLRHLEEILKKAVNEVVSHTAKSVLA----- 537
Query: 556 ELHPSRFCEKDLLKVVDRETLFSYIDDPCSATYPLMQKLRQVLVDHALVNGENEKDSKTS 615
+ P R D+L VV+RE +FSY+DDP S T PLMQKLR VL D AL E E D +
Sbjct: 538 -IEPFR-KHDDILGVVNREYVFSYVDDPSSLTNPLMQKLRHVLFDKALAEPEGETD---T 592
Query: 616 IFQKIATFEDELKSLLPKEVESARAAYESGNPTIPNKINECRSYPLYKFVREELGTELLT 675
+F+KI FE ELK LLPKEVE R YE+G + N+I +CRSYPLY+FVR EL T LLT
Sbjct: 593 VFRKIGAFEAELKFLLPKEVERVRTEYENGTFNVANRIKKCRSYPLYRFVRNELETRLLT 652
Query: 676 GEKTRSPGEECDKLFTAICQGKIIDPLLECLGEWNGAPLPIC 717
GE RSPGE+ DK+F AI QGK+IDPL ECL EWNGAP+ IC
Sbjct: 653 GEDVRSPGEDFDKVFRAISQGKLIDPLFECLKEWNGAPISIC 694
>At2g11140 putative retroelement pol polyprotein
Length = 411
Score = 32.3 bits (72), Expect = 0.95
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 262 GTAVGSGLASIVLFDANVLAILAEVLSAIFAEVMQGK-PEFTDHLTHKLKHHPGQIEAAA 320
G+AV S + +L D ++A+ ++ A G P+ D++ + L H +
Sbjct: 19 GSAVRSAREATILEDQKLMALKQQLTQRSDAYGGNGSNPKVPDNVDNPLILHSSDHPGLS 78
Query: 321 IMEHILDGSSY 331
I+ H+LDGS+Y
Sbjct: 79 IVAHVLDGSNY 89
>At1g54230 hypothetical protein
Length = 266
Score = 32.0 bits (71), Expect = 1.2
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 411 DNTRLALAA-IGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCSE 469
DN+R L + KL+ + E V + Y +P + A+R S A+A +E
Sbjct: 68 DNSRERLRGEVEKLVAERKIEKVGNRYMMMMPQRVPATREDSTTPQRDPQAEAVAKLVAE 127
Query: 470 LQYLANPVTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHL 529
++L + A++++ +NS +I A+EIL ++ +I LC ++ R
Sbjct: 128 TEHLEFQAKEAQELADRYSLMLNSECIILEL----AVEILNRCANGQMIFLCTSLVPRAP 183
Query: 530 EEN 532
EEN
Sbjct: 184 EEN 186
>At3g61770 unknown protein
Length = 284
Score = 31.6 bits (70), Expect = 1.6
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 257 LALVNGTA-----VGSGLASIVLFDA----NVLAILAEVLSAIFAEVMQGKPEFTDHLTH 307
+AL +G A V G + IV++DA + AEVL+ I ++ +G P L
Sbjct: 194 VALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNLIIRDLFEGHPISQRKLKE 253
Query: 308 KLKHHPGQIEAAAIM 322
L H P Q+ A A++
Sbjct: 254 LLGHTPSQVLAGALV 268
>At2g47250 putative pre-mRNA splicing factor RNA helicase
Length = 729
Score = 31.6 bits (70), Expect = 1.6
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 22/128 (17%)
Query: 272 IVLFDANVLAILAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY 331
I+L +A+ + +VL + EV++ +P+ KL +EA E+ G+
Sbjct: 188 IILDEAHERTLATDVLFGLLKEVLRNRPDL------KLVVMSATLEAEKFQEY-FSGAPL 240
Query: 332 MKAAKKLHEVDPL--QKPKQD--RYALRTSPQ--WLGPLIEVIRFST---------KSIE 376
MK +LH V+ Q+P++D A+RT Q P +++ F T + I
Sbjct: 241 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKIN 300
Query: 377 REINSVND 384
+E++++ D
Sbjct: 301 KEVSNLGD 308
>At1g21880 receptor-like GPI-anchored protein (lysM) 1
Length = 416
Score = 30.8 bits (68), Expect = 2.8
Identities = 23/72 (31%), Positives = 33/72 (44%), Gaps = 3/72 (4%)
Query: 321 IMEHILDGSSYMKAAKKLHEVDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIER--E 378
+ HIL ++K VD ++K Y R S LG + + + S E+ E
Sbjct: 81 VENHILPSKLFLKIPITCSCVDGIRKSVSTHYKTRPSDN-LGSIADSVYGGLVSAEQIQE 139
Query: 379 INSVNDNPLIDV 390
NSVND L+DV
Sbjct: 140 ANSVNDPSLLDV 151
>At1g80030 unknown protein
Length = 500
Score = 30.4 bits (67), Expect = 3.6
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 22/153 (14%)
Query: 12 SFICTAANGTATATDPLSWGVAAESMKGSHLNEVKRMVAEYRKPVVKLGGETLTIAQVAA 71
S + A +G AT +S + +K ++ +R+ +Y V K G T +++A
Sbjct: 66 SLVVFATSGDYYATLGVSKSANNKEIKAAY----RRLARQYHPDVNKEPGATEKFKEISA 121
Query: 72 ---IAANEQGVSVELCESARAGVK-----ASSDWVMNSMNNGTDSYGVTTG--------- 114
+ ++EQ ++ + AGVK AS + N + +G + G
Sbjct: 122 AYEVLSDEQKRAL-YDQYGEAGVKSTVGGASGPYTSNPFDLFETFFGASMGGFPGMDQAD 180
Query: 115 FGATSHRRTKNGNALQLELIRFLNAGIFGNGTE 147
FG T R G L+ ++ L+ IFG+ E
Sbjct: 181 FGRTRRSRVTKGEDLRYDITLELSEAIFGSEKE 213
>At1g17930 unknown protein
Length = 478
Score = 30.4 bits (67), Expect = 3.6
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 177 FEILEAITKLINNNITPCLPLRGTVTASGDLVPLSYIAGLLTGRPNSKAVGP 228
F+ +A+ L +N++ C P G + D+VP S+ LL GR +K +GP
Sbjct: 273 FKYRKALDDLDPSNVSWC-PFEGDL----DIVPQSFKDNLLLGRSRTKLIGP 319
>At3g62310 ATP-dependent RNA helicase-like protein
Length = 726
Score = 30.0 bits (66), Expect = 4.7
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 272 IVLFDANVLAILAEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY 331
I+L +A+ + +VL + EV++ +P+ KL +EA ++ G+
Sbjct: 184 IILDEAHERTLATDVLFGLLKEVLKNRPDL------KLVVMSATLEAEKFQDY-FSGAPL 236
Query: 332 MKAAKKLHEVDPL--QKPKQD--RYALRTSPQ 359
MK +LH V+ Q+P++D A+RT Q
Sbjct: 237 MKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQ 268
>At3g48560 acetolactate synthase
Length = 670
Score = 30.0 bits (66), Expect = 4.7
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 40 SHLNEVKRMVAEYRKPVVKLGGETLTIAQVAAIAANEQGVSVEL 83
SHL ++ R+++E +KPV+ +GG L +++E G VEL
Sbjct: 287 SHLEQIVRLISESKKPVLYVGGGCLN-------SSDELGRFVEL 323
>At1g22260 hypothetical protein
Length = 851
Score = 30.0 bits (66), Expect = 4.7
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 18/118 (15%)
Query: 295 MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEVDPLQKPKQDRYAL 354
+Q + E + +T H Q++A Y KKL E LQ+ K++R
Sbjct: 643 IQAENELKERITALKSEHDAQLKAFKCQ--------YEDDCKKLQEELDLQRKKEERQRA 694
Query: 355 RTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN 412
QW + E+E+NS N +S++ L GG+ + I V DN
Sbjct: 695 LVQLQW------KVMSDNPPEEQEVNS---NKNYSISKDSRL-GGSKRSEHIRVRSDN 742
>At4g13450 hypothetical protein
Length = 219
Score = 29.3 bits (64), Expect = 8.1
Identities = 20/59 (33%), Positives = 34/59 (56%), Gaps = 3/59 (5%)
Query: 17 AANGTATATDPLSWGVAAE--SMKGSHLNEVKRMVAEYRKPVVKLGGETLTIAQVAAIA 73
A+NGT TA++ + +A+E G+ L ++KR + E +P V++ E + I V A A
Sbjct: 81 ASNGTTTASNAAANALASEIGQGDGNFLEQMKR-ICEIAQPKVRVHTECIAIDGVKATA 138
>At3g03790 unknown protein
Length = 1078
Score = 29.3 bits (64), Expect = 8.1
Identities = 26/123 (21%), Positives = 48/123 (38%), Gaps = 1/123 (0%)
Query: 417 LAAIGKLMFAQFTELVDDHYNNGLPSNLTASRNPSLDYGLKGAEIAMASYCSELQYLANP 476
L +G L + +V N LD G ++ + +QY NP
Sbjct: 500 LLVVGSLYHPAYAPIVLKKSQTLQADKCREEENEELDEGFMFDDVESVNVLQSVQY-DNP 558
Query: 477 VTTHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKYS 536
V S + + V + ++ R + +EI + + L C+ I +R+L+ L +S
Sbjct: 559 KERIVPSLKSLCEKVAAECIVEPRNAIQLLEIADSLGAEDLKKYCEDIVIRNLDFILTFS 618
Query: 537 VKS 539
+S
Sbjct: 619 PQS 621
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.315 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,353,299
Number of Sequences: 26719
Number of extensions: 639553
Number of successful extensions: 1669
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1656
Number of HSP's gapped (non-prelim): 16
length of query: 717
length of database: 11,318,596
effective HSP length: 106
effective length of query: 611
effective length of database: 8,486,382
effective search space: 5185179402
effective search space used: 5185179402
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Lotus: description of TM0033b.6