BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0030.13
(117 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g42180 unknown protein 155 3e-39
At5g33290 unknown protein 147 1e-36
At5g20260 putative protein 145 2e-36
At5g11130 putative protein 143 2e-35
At5g03800 putative protein 127 9e-31
At5g25310 putative protein 121 6e-29
At3g07620 hypothetical protein 108 4e-25
At5g25820 putative protein 99 3e-22
At4g32790 unknown protein 98 8e-22
At5g19670 putative protein 89 3e-19
At5g37000 putative protein 88 6e-19
At5g11610 unknown protein 86 2e-18
At4g38040 unknown protein 80 1e-16
At4g16740 limonene cyclase like protein 54 2e-08
At1g27440 unknown protein 51 8e-08
At5g61840 unknown protein 49 3e-07
At5g22940 putative protein 47 2e-06
At2g28110 unknown protein 46 3e-06
At1g21480 unknown protein 39 4e-04
At3g57630 unknown protein 38 7e-04
>At3g42180 unknown protein
Length = 341
Score = 155 bits (392), Expect = 3e-39
Identities = 69/120 (57%), Positives = 89/120 (73%), Gaps = 3/120 (2%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSP---FKARHPDEANLFL 57
M+K KVW Y+EGEQPLVHDGP+ +Y IEGQF+DE+ P F+A P+EA+ F
Sbjct: 1 MMKTFKVWSYKEGEQPLVHDGPVNDIYGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFF 60
Query: 58 IPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
+PFS++NIV YVY PI S D++ RL R+ DYV VVA K+P+WN+SNGADHF++SCHD
Sbjct: 61 LPFSVANIVHYVYQPITSPADFNRARLHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHD 120
>At5g33290 unknown protein
Length = 500
Score = 147 bits (370), Expect = 1e-36
Identities = 66/120 (55%), Positives = 87/120 (72%), Gaps = 3/120 (2%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDE--IDSCR-KSPFKARHPDEANLFL 57
M+ R KVW Y EGE PL HDGP+ +Y IEGQFMDE +D + +S F+A P+ A++F
Sbjct: 160 MMNRFKVWTYTEGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSRSRFRADRPENAHVFF 219
Query: 58 IPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
IPFS++ ++ +VY PI S + + RL RL+EDYV VVA K+PYWNRS G DHF++SCHD
Sbjct: 220 IPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKHPYWNRSQGGDHFMVSCHD 279
>At5g20260 putative protein
Length = 334
Score = 145 bits (367), Expect = 2e-36
Identities = 69/117 (58%), Positives = 88/117 (74%), Gaps = 4/117 (3%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+ KVWVY EGE PLVH GP+ +YSIEGQFMDEI++ SPF A +P+EA+ FL+P
Sbjct: 1 MEKKFKVWVYREGETPLVHMGPMNNIYSIEGQFMDEIET-GMSPFAANNPEEAHAFLLPV 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S++NIV Y+Y P+++ Y +L ++ DYV VVA KYPYWNRS GADHF +SCHD
Sbjct: 60 SVANIVHYLYRPLVT---YSREQLHKVFLDYVDVVAHKYPYWNRSLGADHFYVSCHD 113
>At5g11130 putative protein
Length = 336
Score = 143 bits (360), Expect = 2e-35
Identities = 66/117 (56%), Positives = 84/117 (71%), Gaps = 4/117 (3%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M KR K+W Y EGE PL H GPL +Y+IEGQFMDEI++ S FKA P+EA +F IP
Sbjct: 1 MEKRFKIWTYREGEAPLFHKGPLNNIYAIEGQFMDEIEN-GNSRFKAASPEEATVFYIPV 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
I NI+++VY P S Y RLQ +V+DY+ +++++YPYWNRS GADHF LSCHD
Sbjct: 60 GIVNIIRFVYRPYTS---YARDRLQNIVKDYISLISNRYPYWNRSRGADHFFLSCHD 113
>At5g03800 putative protein
Length = 1388
Score = 127 bits (319), Expect = 9e-31
Identities = 57/117 (48%), Positives = 84/117 (71%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+ K++VY+EGE PL HDGP K +YS+EG F+ EI++ + F+ +PD+A++F +PF
Sbjct: 1056 MEKQFKIYVYKEGEPPLFHDGPCKSIYSMEGSFIYEIETDTR--FRTNNPDKAHVFYLPF 1113
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ +V+YVY + ++ V+DY+++V DKYPYWNRS GADHF+LSCHD
Sbjct: 1114 SVVKMVRYVY----ERNSRDFSPIRNTVKDYINLVGDKYPYWNRSIGADHFILSCHD 1166
>At5g25310 putative protein
Length = 334
Score = 121 bits (303), Expect = 6e-29
Identities = 53/117 (45%), Positives = 85/117 (72%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M KR KV+VYEEGE PLVHDGP K +Y++EG+F+ E++ R++ F+ P++A ++ +PF
Sbjct: 1 MEKRFKVYVYEEGEPPLVHDGPCKSVYAVEGRFITEMEK-RRTKFRTYDPNQAYVYFLPF 59
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S++ +V+Y+Y + + L+ V DY+ +V+ +P+WNR+NGADHF+L+CHD
Sbjct: 60 SVTWLVRYLY-----EGNSDAKPLKTFVSDYIRLVSTNHPFWNRTNGADHFMLTCHD 111
>At3g07620 hypothetical protein
Length = 470
Score = 108 bits (270), Expect = 4e-25
Identities = 47/117 (40%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K K++VYEEG+ P+ H G K +YS+EG F++ +++ ++ R PD+A+++ +PF
Sbjct: 139 MEKMFKIYVYEEGDPPIFHYGLCKDIYSMEGLFLNFMEN-DVLKYRTRDPDKAHVYFLPF 197
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S+ I+ +++ P++ + L+R++ DYV +++ KYPYWN S+G DHF+LSCHD
Sbjct: 198 SVVMILHHLFDPVVRDKAV----LERVIADYVQIISKKYPYWNTSDGFDHFMLSCHD 250
>At5g25820 putative protein
Length = 654
Score = 99.4 bits (246), Expect = 3e-22
Identities = 50/118 (42%), Positives = 78/118 (65%), Gaps = 7/118 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K LKV+ Y+EG +P++H L+G+Y+ EG FM+ I+S + F + P +A+LF +PF
Sbjct: 320 MEKILKVYAYKEGNKPIMHSPILRGIYASEGWFMNIIES-NNNKFVTKDPAKAHLFYLPF 378
Query: 61 SISNIVQYVYMPILSQQDYHLGR-LQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S + +Y+ QD H R L + ++DY+ ++ KYP+WNR++GADHFL +CHD
Sbjct: 379 SSRMLEVTLYV-----QDSHSHRNLIKYLKDYIDFISAKYPFWNRTSGADHFLAACHD 431
>At4g32790 unknown protein
Length = 593
Score = 97.8 bits (242), Expect = 8e-22
Identities = 47/117 (40%), Positives = 80/117 (68%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M K+LKV+VY EG++P++H LKG+Y+ EG FM ++ S R F + P +A+LF +PF
Sbjct: 263 MEKKLKVYVYREGKRPVLHKPVLKGIYASEGWFMKQLKSSR--TFVTKDPRKAHLFYLPF 320
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S + + +Y+P S D + L + +++Y+ +++ KY +WN++ G+DHFL++CHD
Sbjct: 321 SSKMLEETLYVP-GSHSDKN---LIQFLKNYLDMISSKYSFWNKTGGSDHFLVACHD 373
>At5g19670 putative protein
Length = 600
Score = 89.4 bits (220), Expect = 3e-19
Identities = 42/117 (35%), Positives = 77/117 (64%), Gaps = 6/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M + LKV+VY+EG +P+ H LKGLY+ EG FM ++ ++ + + P +A+L+ +PF
Sbjct: 267 MERILKVYVYKEGNRPIFHTPILKGLYASEGWFMKLMEGNKQ--YTVKDPRKAHLYYMPF 324
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
S + +Y+ + ++ L++ +++Y ++ KYP++NR++GADHFL++CHD
Sbjct: 325 SARMLEYTLYV----RNSHNRTNLRQFLKEYTEHISSKYPFFNRTDGADHFLVACHD 377
>At5g37000 putative protein
Length = 547
Score = 88.2 bits (217), Expect = 6e-19
Identities = 44/117 (37%), Positives = 74/117 (62%), Gaps = 7/117 (5%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPF 60
M ++LK++VY+EG +P+ H +G+Y+ EG FM ++S +K F + P +A+LF IP
Sbjct: 236 MERKLKIYVYKEGGKPIFHTPMPRGIYASEGWFMKLMESNKK--FVVKDPRKAHLFYIPI 293
Query: 61 SISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
SI + + + + + L +++YV ++A KY +WNR+ GADHFL++CHD
Sbjct: 294 SIKALRSSLGLDFQTPKS-----LADHLKEYVDLIAGKYKFWNRTGGADHFLVACHD 345
>At5g11610 unknown protein
Length = 546
Score = 86.3 bits (212), Expect = 2e-18
Identities = 43/119 (36%), Positives = 72/119 (60%), Gaps = 8/119 (6%)
Query: 1 MVKRLKVWVYEEGEQPLVH--DGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLI 58
M + LKV+VY EG++P+ H + ++G+Y+ EG FM ++S + F + P +A+LF I
Sbjct: 216 MEQTLKVYVYSEGDRPIFHQPEAIMEGIYASEGWFMKLMESSHR--FLTKDPTKAHLFYI 273
Query: 59 PFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCHD 117
PFS + Q +Y+ + L + + +Y+ ++A YP WNR+ G+DHF +CHD
Sbjct: 274 PFSSRILQQKLYV----HDSHSRNNLVKYLGNYIDLIASNYPSWNRTCGSDHFFTACHD 328
>At4g38040 unknown protein
Length = 425
Score = 80.5 bits (197), Expect = 1e-16
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 22/123 (17%)
Query: 1 MVKRLKVWVYEEGEQPLVHDGPLK--GLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLI 58
M KR KV++Y +G+ + P K G Y+ EG F I R+S F+ PDEA+LF I
Sbjct: 100 MEKRFKVYIYPDGDPNTFYQTPRKVTGKYASEGYFFQNI---RESRFRTLDPDEADLFFI 156
Query: 59 PFSISNI----VQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLS 114
P S + Y M ++ V++YV + KYPYWNR+ GADHF ++
Sbjct: 157 PISCHKMRGKGTSYENMTVI-------------VQNYVDGLIAKYPYWNRTLGADHFFVT 203
Query: 115 CHD 117
CHD
Sbjct: 204 CHD 206
>At4g16740 limonene cyclase like protein
Length = 1024
Score = 53.5 bits (127), Expect = 2e-08
Identities = 22/61 (36%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 5 LKVWVYEEGEQPLVHDGPLKGLYSIEGQFMDEIDSCRKSPFKARHPDEANLFLIPFSISN 64
LKV++Y +G++P+ H+ L G+Y+ EG FM ++S ++ F ++P+ A+LF +P+S+
Sbjct: 688 LKVYIYPDGDKPIFHEPHLNGIYASEGWFMKLMESNKQ--FVTKNPERAHLFYMPYSVKQ 745
Query: 65 I 65
+
Sbjct: 746 L 746
>At1g27440 unknown protein
Length = 412
Score = 51.2 bits (121), Expect = 8e-08
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 2 VKRLKVWVYEEGEQPLVHDGPL--KGLYSIEGQFMDEIDSCR---KSPFKARHPDEANLF 56
V +LKV+VYE P ++ L K + F EI R SP + R+PDEA+ F
Sbjct: 43 VGKLKVYVYE---LPSKYNKKLLQKDPRCLTHMFAAEIFMHRFLLSSPVRTRNPDEADWF 99
Query: 57 LIPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCH 116
P + + +P+ + R++ + +++ +PYWNR+ GADHF + H
Sbjct: 100 YTPIYPTCDLTPTGLPLPFKSP-------RMMRSSIQLISSNWPYWNRTEGADHFFVVPH 152
Query: 117 D 117
D
Sbjct: 153 D 153
>At5g61840 unknown protein
Length = 415
Score = 49.3 bits (116), Expect = 3e-07
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 15/121 (12%)
Query: 2 VKRLKVWVYEEGEQPLVHDGPL--KGLYSIEGQFMDEIDSCR---KSPFKARHPDEANLF 56
V RLKV+VYE P ++ + K + F EI R SP + +P+EA+ F
Sbjct: 46 VGRLKVFVYE---LPSKYNKKILQKDPRCLNHMFAAEIYMQRFLLSSPVRTLNPEEADWF 102
Query: 57 LIPFSISNIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNRSNGADHFLLSCH 116
+P + + +P+ + R++ + ++A +PYWNR+ GADHF + H
Sbjct: 103 YVPVYTTCDLTPNGLPLPFKSP-------RMMRSAIQLIASNWPYWNRTEGADHFFVVPH 155
Query: 117 D 117
D
Sbjct: 156 D 156
>At5g22940 putative protein
Length = 498
Score = 47.0 bits (110), Expect = 2e-06
Identities = 26/76 (34%), Positives = 38/76 (49%), Gaps = 8/76 (10%)
Query: 43 SPFKARHPDEANLFLIPFSIS-NIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPY 101
S + PDEA+ F +P +S N P LS + L+ V ++D YP+
Sbjct: 178 SDVRTLDPDEADYFFVPVYVSCNFSTSNGFPSLSHA-------RSLLSSAVDFLSDHYPF 230
Query: 102 WNRSNGADHFLLSCHD 117
WNRS G+DH ++ HD
Sbjct: 231 WNRSQGSDHVFVASHD 246
>At2g28110 unknown protein
Length = 448
Score = 45.8 bits (107), Expect = 3e-06
Identities = 22/73 (30%), Positives = 38/73 (51%), Gaps = 8/73 (10%)
Query: 46 KARHPDEANLFLIPFSIS-NIVQYVYMPILSQQDYHLGRLQRLVEDYVHVVADKYPYWNR 104
+ P EA+ F +P +S N P + G + L+ D + +V+ +YP+WNR
Sbjct: 138 RTEDPYEADFFFVPVYVSCNFSTINGFPAI-------GHARSLINDAIKLVSTQYPFWNR 190
Query: 105 SNGADHFLLSCHD 117
++G+DH + HD
Sbjct: 191 TSGSDHVFTATHD 203
>At1g21480 unknown protein
Length = 462
Score = 38.9 bits (89), Expect = 4e-04
Identities = 33/120 (27%), Positives = 60/120 (49%), Gaps = 25/120 (20%)
Query: 5 LKVWVYEEGE----QPLVH--DGPLKGLYSIEGQFMDEIDSCR---KSPFKARHPDEANL 55
LK++VY+E E + L++ DG +K ++GQ+ ++ + +S F+ DEA+L
Sbjct: 89 LKIYVYDENEIDGLKELLYGRDGSVKTTACLKGQWGSQVKIHKLLLESKFRTIKKDEADL 148
Query: 56 FLIPFSISNIVQYVYMPILSQQDYHLGRL--QRLVEDYVHVVADKYPYWNRSNGADHFLL 113
F +P + + LG L + + + YV V++ + PY+ RS G DH +
Sbjct: 149 FFVPAYVKCVRM-------------LGGLNDKEINQTYVKVLS-QMPYFRRSGGRDHIFV 194
>At3g57630 unknown protein
Length = 793
Score = 38.1 bits (87), Expect = 7e-04
Identities = 25/66 (37%), Positives = 35/66 (52%), Gaps = 8/66 (12%)
Query: 51 DEANLFLIPFSISNIVQYVY-MPILSQQDYHLGRLQRLVED-----YVHVVADKYPYWNR 104
+EA+ F +P S I+ P ++ Q+ H G L + Y H+V +KYPYWNR
Sbjct: 412 EEADFFFVPVLDSCIINRADDAPHINMQN-HTGLRSSLTLEFYKRAYEHIV-EKYPYWNR 469
Query: 105 SNGADH 110
S G DH
Sbjct: 470 SAGRDH 475
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.323 0.142 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,848,658
Number of Sequences: 26719
Number of extensions: 108460
Number of successful extensions: 293
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 240
Number of HSP's gapped (non-prelim): 35
length of query: 117
length of database: 11,318,596
effective HSP length: 93
effective length of query: 24
effective length of database: 8,833,729
effective search space: 212009496
effective search space used: 212009496
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)
Lotus: description of TM0030.13