BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0029b.1
(1377 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20390 hypothetical protein 1011 0.0
At2g15410 putative retroelement pol polyprotein 824 0.0
At3g31530 hypothetical protein 569 e-162
At2g13330 F14O4.9 463 e-130
At2g15100 putative retroelement pol polyprotein 388 e-107
At2g14400 putative retroelement pol polyprotein 387 e-107
At2g14380 putative retroelement pol polyprotein 358 2e-98
At1g37200 hypothetical protein 335 1e-91
At4g03800 325 1e-88
At2g13230 pseudogene 231 2e-60
At2g10780 pseudogene 229 1e-59
At4g10580 putative reverse-transcriptase -like protein 225 2e-58
At2g04670 putative retroelement pol polyprotein 222 1e-57
At2g14650 putative retroelement pol polyprotein 213 6e-55
At3g11970 hypothetical protein 211 2e-54
At1g36590 hypothetical protein 211 2e-54
At2g07660 putative retroelement pol polyprotein 210 4e-54
At2g13060 pseudogene 184 2e-46
At2g06890 putative retroelement integrase 184 3e-46
At1g35370 hypothetical protein 179 1e-44
>At1g20390 hypothetical protein
Length = 1791
Score = 1011 bits (2613), Expect = 0.0
Identities = 584/1426 (40%), Positives = 822/1426 (56%), Gaps = 94/1426 (6%)
Query: 1 WCEFHRSAGHDTDDCRTLQREIDKLIRAGYQ-GNRQGQWRNGGDQNKAHKREEERA---- 55
+CE+H+S H T++CR LQ L+ A Y+ G + NK +R E A
Sbjct: 410 YCEYHKSRAHSTENCRFLQG----LLMAKYKSGGITIECDRPPINNKNQRRNETTARQYL 465
Query: 56 --DTKGKKKQESAAIATKGADDTFA--QHSGPPVGT-------INTIAGGFGGGGDTHAA 104
TK E I + ADD A Q +G + ++ I GG D+ +
Sbjct: 466 NDQTKPPTPAEQGIITS--ADDPAAKRQRNGKAIAAEPVVVRQVHVIMGGLQNCSDSVRS 523
Query: 105 RKRHVRAVNSVHEVAFGFV-----HPD----ITISMADFEGIKPHKDDPIVVQLRMNSFN 155
K++ + V VA+ +P+ I+ + D EG+ +DP+VV+L ++
Sbjct: 524 IKQYRKKAEMV--VAWPSSTSTTRNPNQSAPISFTDVDLEGLDTPHNDPLVVELIISDSR 581
Query: 156 IRRVLLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGED 215
+ RVL+D GSS D+I+ D + +TD + P + L GF G+ VM G I L G
Sbjct: 582 VTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPVSKPLAGFDGDFVMTIGTIKLPIFVG-- 639
Query: 216 ECARVLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGRLKVDQKM 275
+ V+++V+ A YNVI+G ++++ A+ ST H VK+P
Sbjct: 640 --GLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIPSTYHQCVKFPT-------------- 683
Query: 276 ARECYNNCLNLYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPTPIEETKALKFGDRTL 335
+N L K A R YE + L ++ P R +
Sbjct: 684 ----HNGIFTLRAPKEAKTPSRSYE----ESELCRTEMVNIDESDPT----------RCV 725
Query: 336 KIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLRRRL 395
+G ++ L LL N FAWS +DM GIDP H L ++P+ KPV Q RR+L
Sbjct: 726 GVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKL 785
Query: 396 GGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACPKDS 455
G ++ +AV +EV+KLL A I EVKYP WLAN V+VKK NGKWR+CVDYTDLNKACPKDS
Sbjct: 786 GPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVCVDYTDLNKACPKDS 845
Query: 456 YPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLK 515
YPLP ID LV+ SGN LLS MDA+SGY+QI MH D++KT+F+T R YCY+ M FGLK
Sbjct: 846 YPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKVMSFGLK 905
Query: 516 NAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPE 575
NAGATYQR ++++ A Q+GR +EVY+DDM+VKS++ DH + L + F + + M+LNP
Sbjct: 906 NAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYGMKLNPT 965
Query: 576 KCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPKS 635
KC+FGV G+FLG+++T RGIE NP++ +AI ++ SP N +EVQRLTGRIAAL+RF+ +S
Sbjct: 966 KCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRLTGRIAALNRFISRS 1025
Query: 636 GDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSAL 695
D+ PF+ L++ F+W + EEAF +LK+ LS+PPIL KP G L+LY AVSD A+
Sbjct: 1026 TDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAV 1085
Query: 696 SSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTD 755
SSV+++E GE R +++ S +L AE RY IEKAALAV+ +AR+LRPYFQS + V TD
Sbjct: 1086 SSVLVREDRGEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTD 1145
Query: 756 LPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPDRFERV---- 811
PLR L P SGR+ W+VELSEY + + R + +Q LADF++EL ER
Sbjct: 1146 QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPLQSAERAVSGN 1205
Query: 812 -DTQWTLFVDGSSNSSGSGAGVALEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAR 870
+W+L+VDGSS++ GSG G+ L P VLEQS + F ATNN AEYE LIAGL+LA
Sbjct: 1206 RGEEWSLYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAA 1265
Query: 871 EVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQR 930
++I ++ TDSQL+ Q+ G ++ K+ + YL+ V+ + F+ + +PR +N
Sbjct: 1266 GMQITTIHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAP 1325
Query: 931 ADALAKLASTRKPGNNKSVIQETLAYPSIEG-ELMSCVNRGRT-----------WMDPII 978
ADALA LA T + + E++ PSI+ + + VN R+ W I
Sbjct: 1326 ADALAALALTSDSDLRRIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIR 1385
Query: 979 SILAGDPAEVEQCTKEQQR-EASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEG 1037
L+ ++ T + R +A+ YTL+ HL + +L C+ + IM E HEG
Sbjct: 1386 DYLSDGTLPSDKWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEG 1445
Query: 1038 VCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPW 1097
+H GGR+LA K+ + GFYWPT+ DC F +C++CQ A P + L AP+
Sbjct: 1446 AAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPY 1505
Query: 1098 PFAMWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFG 1157
PF W +D+VGP P +R Q +FILV DYFTKW+EAE A I + + NF WK I+CR G
Sbjct: 1506 PFMRWAMDIVGPMPASR-QKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHG 1564
Query: 1158 IPRAIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAE 1217
+P I++DNG+QF S FC I++ ++ +PQ NGQ E+ N+ IL GL++RL E
Sbjct: 1565 LPYEIITDNGSQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDE 1624
Query: 1218 AKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFE--EEN 1275
KGAW DEL VLWSY TT +S T +TPF YG++AM P E+ + R + E N
Sbjct: 1625 KKGAWADELDGVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN 1684
Query: 1276 QANMAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVLK--WRSGAPGN 1333
M LD L E R+ A R + A +N +V R VGDLVL+ + + A N
Sbjct: 1685 DRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEIN 1744
Query: 1334 --KLTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFY 1377
KL NWEG Y++ K++ G Y L + G +PR++N + L+ +Y
Sbjct: 1745 AGKLGANWEGSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1790
>At2g15410 putative retroelement pol polyprotein
Length = 1787
Score = 824 bits (2129), Expect = 0.0
Identities = 463/1115 (41%), Positives = 635/1115 (56%), Gaps = 126/1115 (11%)
Query: 333 RTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLR 392
R + I L E + L L +N FAWS +DMPGID CH L ++P+ KP+ Q R
Sbjct: 728 RCVGIRIDLPSELQNELVNFLRQNAATFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKR 787
Query: 393 RRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACP 452
R+LG D+ K V +EV KLL A I EV+YP WL N V+VKK NGKWR+C+D+TDLNKACP
Sbjct: 788 RKLGPDRTKDVNEEVKKLLDAGSIVEVRYPDWLRNPVVVKKKNGKWRVCIDFTDLNKACP 847
Query: 453 KDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPF 512
KDS+PLP ID LV+ +GNELLS MDA+SGY+QI MH D +KT F+T + YCY+ MPF
Sbjct: 848 KDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQNDREKTVFITDQGTYCYKVMPF 907
Query: 513 GLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRL 572
GLKNAGATY RL++++F Q+ +MEVY+DDM+VKS+R +H L + F + +++M+L
Sbjct: 908 GLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKL 967
Query: 573 NPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFL 632
NP KC+FGV G+FLG+++T RGIE NP++ AI + SP N +EVQRL GRIAAL+RF+
Sbjct: 968 NPSKCTFGVTSGEFLGYLVTRRGIEANPKQISAIIDLPSPRNTREVQRLIGRIAALNRFI 1027
Query: 633 PKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSD 692
+S D+ PF++ LR N FEW +CEE G L+LY AVS
Sbjct: 1028 SRSTDKCLPFYQLLRANKRFEWDEKCEE--------------------GETLYLYIAVST 1067
Query: 693 SALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKV 752
SA+S V+++E GE +++VS TL GAE+RY +EK A AV+++AR+LRPYF+S+ V+V
Sbjct: 1068 SAVSGVLVREDRGEQHPIFYVSKTLDGAELRYPTLEKLAFAVVISARKLRPYFKSYTVEV 1127
Query: 753 RTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPDRFERVD 812
T+ PLR +L P SGRL W+VELSEY + Y R + P R R
Sbjct: 1128 LTNQPLRTILHSPSQSGRLAKWAVELSEYDIAYKNRTCAKSHR--------APTRPYR-- 1177
Query: 813 TQWTLFVDGSSNSSGSGAGVALEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREV 872
+ + F A+NN+AEYEALIAGL+LA +
Sbjct: 1178 -------------------------RSIPCRKVDLARFPASNNEAEYEALIAGLRLAHGI 1212
Query: 873 KIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRAD 932
+++ + DSQLV +Q G ++ K+ + YL+ VR L F+ + +PR++N AD
Sbjct: 1213 EVKKIQAYCDSQLVASQFSGNYEAKNERMDAYLKVVRELSYNFEVFELTKIPRSDNAPAD 1272
Query: 933 ALAKLASTRKPGNNKSV-----------IQETLAYPS------IEGELMSCV-------- 967
ALA LAST P + + IQ T+ PS + E +S V
Sbjct: 1273 ALAVLASTSDPDLRRVIPVECIDVPSIKIQGTITKPSEYTVIDLTAEQLSIVMVILPPAT 1332
Query: 968 ------------------------------NRGR--------TWMDPIISILAGDPAEVE 989
NR W++ I S +A +
Sbjct: 1333 DRSEDAGPSGNLVCSSDPGQSSGCDRSDDSNRSADSDSPASTNWIEEIRSYIADRIVPKD 1392
Query: 990 QCTKEQQREAS-HYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSL 1048
+ + R S YTL HL R + LL C+ E+ + +M E+HEG +H GGR+L
Sbjct: 1393 KWAARRLRARSAQYTLPHEHLLRWSATGVLLSCLDDEEAQQVMREIHEGAGGNHSGGRAL 1452
Query: 1049 ACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVDLVG 1108
A K+ + G YWPT+ DC FV +C++CQ A P + L T P+PF W +D++
Sbjct: 1453 ALKIRKHGQYWPTMNADCEKFVARCEKCQGHAPFIHIPSEVLQTAMPPYPFMRWAMDIIR 1512
Query: 1109 PFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGT 1168
PFP +R Q K+ILV DYFTKW EAE A+I S ++ NF WK I+C G+P IV+DNGT
Sbjct: 1513 PFPASR-QKKYILVMTDYFTKWFEAESYARIQSKEVQNFVWKNIICHHGLPYEIVTDNGT 1571
Query: 1169 QFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPA 1228
QF+S Q FC + I++ ++ +PQ NGQ E+ N+ IL GL++RL E KGAW DEL
Sbjct: 1572 QFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQAEATNKTILDGLKKRLDEKKGAWADELDG 1631
Query: 1229 VLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEE--NQANMAVELDLL 1286
VLWSY TT + +T TPF +TYG++A+ P E T R + N + LD L
Sbjct: 1632 VLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVRRSMLINDPTLNDQMLLDNLDTL 1691
Query: 1287 SETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVLKW----RSGAPGNKLTPNWEGP 1342
E RD+A +R +Q A +N +V+ R GDLVL+ KL +WEGP
Sbjct: 1692 EEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGP 1751
Query: 1343 YRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFY 1377
Y I KV+ G Y L +DG +PRS+N +L+ +Y
Sbjct: 1752 YLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786
Score = 41.6 bits (96), Expect = 0.003
Identities = 61/259 (23%), Positives = 95/259 (36%), Gaps = 47/259 (18%)
Query: 3 EFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNG-GDQNKAHKREE--ERADTKG 59
EFH+ GH TD+CR LQ + + G + R G D++ H+R E +R +
Sbjct: 467 EFHKIPGHSTDECRQLQTLLLTKFKKGDLDIEPDRRRTGTNDRDNTHRRVENTDRDNQDD 526
Query: 60 KKKQESA-------------AIATKGADDTFAQHSGPPVG--TINTIAGGFGGGGDTHAA 104
K++Q+ A K D Q P N I GG D+ +
Sbjct: 527 KRRQDETDRRAERIHDDDRRAEPHKRNHDAPRQFEDEPASKRRRNMIMGGLTACRDSVRS 586
Query: 105 RKRHVRAVNSVH-----EVAFGFVHPDITISMADFEGIKPHKDDPIVVQLRMNSFNIRRV 159
K + R + + IT S AD + +DP+VV+L++ + ++
Sbjct: 587 IKSYRRQGEKQRAWIEKNTSAVECNEPITFSEADI-ALPGSHNDPLVVELKIGENVLLQL 645
Query: 160 LLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECAR 219
+D S D + L GF G+ +M G I L G
Sbjct: 646 EIDVRSFQDKVQ-------------------PLTGFDGDTIMTVGTITLPIYVG----GT 682
Query: 220 VLKVRYLVLQVVASYNVII 238
V + V+ YNVI+
Sbjct: 683 VSWFEFAVVDKPIIYNVIL 701
>At3g31530 hypothetical protein
Length = 831
Score = 569 bits (1466), Expect = e-162
Identities = 331/839 (39%), Positives = 476/839 (56%), Gaps = 105/839 (12%)
Query: 471 NELL--SLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRV 528
N+LL S +++ + + M+P D++KTAF T + +CYR MPFGLKNAGATY+R ++++
Sbjct: 77 NQLLETSYCHSWTLFVVMMMNPEDQEKTAFYTEQGIFCYRVMPFGLKNAGATYERFVNKI 136
Query: 529 FARQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLG 588
FA Q+G+ MEVY+DDM+VKS+ DH L E F ++ ++++LNP KC FGV+ G
Sbjct: 137 FALQIGKTMEVYIDDMLVKSMTEKDHISHLRECFKQLNLYNVKLNPAKCRFGVRSG---- 192
Query: 589 FMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPKSGDRSFPFFKCLRK 648
IE NP++ +A+ M SP N +EVQ LTGR+AAL+RF+ +S ++ F+ LR+
Sbjct: 193 -------IEANPKQIEALLGMASPQNKREVQCLTGRVAALNRFISRSTEKCLAFYDVLRR 245
Query: 649 NVVFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQEIDGEHR 708
N FEWT CEEAF LK+ L++PPIL+KP+ G P +LY AVSD+A+S +++E GE +
Sbjct: 246 NKKFEWTTRCEEAFQELKKYLATPPILAKPVIGEPQYLYVAVSDTAVSGELVREDRGEQK 305
Query: 709 IVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLPLRQVLQKPDLS 768
++++VS T AE RY ++EK ALAV+++A++LRPYFQS + V +PLR +L P S
Sbjct: 306 LIFYVSQTFTSAESRYPQMEKLALAVVMSAQKLRPYFQSHSIIVMGSMPLRVILHSPSQS 365
Query: 769 GRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPD--RFERVDTQWTLFVDGSSNSS 826
GRL W++ELSEY ++Y + +Q LADF+VEL R +DT W L VDGSS+
Sbjct: 366 GRLAKWTIELSEYDIEYQNKTCAKSQVLADFIVELPTKEARENPLDTTWLLHVDGSSSKQ 425
Query: 827 GSGAGVALEGP-GELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLLIRTDSQL 885
GSG G+ L P GE ATNN AEYEAL+AGL LA +KI DSQL
Sbjct: 426 GSGVGIRLTSPTGE------------ATNNVAEYEALVAGLNLAWGLKIGKTRAFCDSQL 473
Query: 886 VENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRADALAKLASTRKPGN 945
+ NQ G + +D + YL V+ L F E + +PR EN ADALA LAST
Sbjct: 474 IANQFNGEYTTQDKKMEAYLIHVQNLAKNFDEFELTRIPRGENTSADALAALASTSDTSL 533
Query: 946 NKSVIQETLAYPSIE-------------GELMSCVNRGRTWMDPIISILA-GDPAEVEQC 991
+ + E + PSIE + + WM+PIIS ++ G +
Sbjct: 534 KRVIPVEFIEKPSIELGKEEHVLPIQISADQDDPDDCNSEWMEPIISYISEGKLPSDKWK 593
Query: 992 TKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACK 1051
++ + +A+ + L+D LY+ S PL+ CV E IM E+H G SH
Sbjct: 594 ARKLKAQAARFVLVDTKLYKWRLSGPLMTCVEAEAICKIMKEIHSG---SHA-------- 642
Query: 1052 VLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFP 1111
PT+ + P + L ++++P+PF W +D++GP
Sbjct: 643 --------PTIHQ---------------------PAELLSSIASPYPFMRWSMDIIGPMH 673
Query: 1112 TARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFS 1171
++ Q K +LV DYF+KWIEAE A I A++ NF K I+CR GIP IV+DNG+QF
Sbjct: 674 PSK-QKKLVLVLTDYFSKWIEAESYASIKDAQVENFVLKHILCRHGIPYEIVTDNGSQFI 732
Query: 1172 SSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLW 1231
S++ + FC + GI++ ++ +PQ NGQ E+AN EL VLW
Sbjct: 733 STRFQGFCDKWGIRLSKSTPRYPQGNGQAEAAN--------------------ELEGVLW 772
Query: 1232 SYNTTEQSTTRETPFRMTYGVDAMLPVE--IDNFTWRTRPGFEEENQANMAVELDLLSE 1288
+ TT + TRETPF YG + ++P E + + P + +N ELDL+ E
Sbjct: 773 LHRTTPRRATRETPFASIYGTECVIPAEMIVPSLRRSLSPENDPDNTQTPLDELDLIDE 831
Score = 34.7 bits (78), Expect = 0.39
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 234 YNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGRLKVDQKMARECYNNCL 284
YN IIG LN+ AV ST HL +K+P S +L ++ A + N L
Sbjct: 30 YNAIIGTPWLNQFRAVASTYHLCLKFPTSDSVWEKLGHERAEAVKAENQLL 80
>At2g13330 F14O4.9
Length = 889
Score = 463 bits (1191), Expect = e-130
Identities = 244/528 (46%), Positives = 333/528 (62%), Gaps = 32/528 (6%)
Query: 435 NGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADED 494
NGKWR+C+D+ DLNKACPKDS+PLP ID LV+ +E LS MDA+ GY+QI M ++
Sbjct: 291 NGKWRVCIDFRDLNKACPKDSFPLPHIDRLVEATVEHEKLSFMDAFYGYNQILMRRDGQE 350
Query: 495 KTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDH 554
KTAF+T R Y Y+ MPFGLKNAG TYQRL++R+F Q+G+ +EVY+DDM+VKS DH
Sbjct: 351 KTAFITDRGTYYYKVMPFGLKNAGTTYQRLVNRMFVDQLGKTIEVYIDDMLVKSAHEKDH 410
Query: 555 HQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSN 614
L E F + K M+LNPEKCSF VQ +FL +++T RGIE NP++ A +M SP
Sbjct: 411 VPQLRECFKILIKFEMKLNPEKCSFEVQSREFLEYLVTERGIEANPKQIAAFIEMPSPKM 470
Query: 615 VKEVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPI 674
+EVQRLTGRI AL+ F+ +S ++ PF++ LRK F+W +CE+AF +LK L+ PPI
Sbjct: 471 AREVQRLTGRIPALNGFISRSANKCVPFYQPLRKGKEFDWNKDCEQAFKQLKAYLTEPPI 530
Query: 675 LSKPIQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAV 734
L+KP +G PL+LY + R +EK AL V
Sbjct: 531 LAKPEKGEPLYLY------------------------------TNRDKRCPAMEKLALTV 560
Query: 735 LVTARRLRPYFQSFPVKVRTDLPLRQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQ 794
+++ R+LR YFQS P+ V T P+R +L SGRL W++EL EY ++Y R ++ AQ
Sbjct: 561 VMSVRKLRLYFQSHPIVVMTSQPIRTILHSLTQSGRLAKWAIELREYDIEYRTRTSLKAQ 620
Query: 795 SLADFVVELTPDRFERVDT--QWTLFVDGSSNSSGSGAGVALEGPGELVLEQSLKFEFKA 852
LADFV++L + ++ +W L VDGSSN GSG G+ L P V+EQSL+ F A
Sbjct: 621 VLADFVIKLPLADLDGTNSNKKWLLHVDGSSNRQGSGVGIQLTSPTGEVIEQSLQLGFNA 680
Query: 853 TNNQAEYEALIAGLKLAREVKIRSLLIRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLM 912
+NN++EYEALIAG+KLA+E IR + +DSQLV +Q G ++ KD + YLE V+ L
Sbjct: 681 SNNESEYEALIAGIKLAQEKGIREIHAYSDSQLVTSQFHGEYEAKDERMEAYLELVKTLA 740
Query: 913 TLFQEVVVEYVPRAENQRADALAKLASTRKPGNNKSVIQETLAYPSIE 960
F+ + +PR EN AD LA LAST P + + E + + SI+
Sbjct: 741 QQFESFKLTRIPRGENTSADTLAALASTSDPFVKRIIPVEGIEHTSID 788
Score = 87.8 bits (216), Expect = 4e-17
Identities = 75/241 (31%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 138 KPHKDDPIVVQLRMNSFNIRRVLLDQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAG 197
KPH DD +V+++ + ++ + +++D GSS D+++ DAF + G D+ L L GFAG
Sbjct: 59 KPH-DDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSKLQGRKTPLTGFAG 117
Query: 198 EQVMVRGYIDLDTIFGEDECARVLK--VRYLVLQVVASYNVIIGRNTLNRLCAVISTAHL 255
+ G I L TI AR ++ +LV+ A +N I+GR L+ + AV ST H
Sbjct: 118 DTTFSIGTIQLPTI------ARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKAVPSTYHQ 171
Query: 256 AVKYPLSSGKVGRLKVDQKMARECYNNCLNLYGKKSALVGHRCYEIEASD----ENLDPR 311
+K+P G + + Q+ +R+CY K +V E E ++ +LDP
Sbjct: 172 CIKFPSYKG-IAVVYGSQRSSRKCYMGSYEDIKKADPVV--LMIEDELAEMKTVRSLDPS 228
Query: 312 GEGRVNRPTPIEETKALKFGD--RTLKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPG 369
G R + I + + D R + IG L L L EN D FAWS ++ G
Sbjct: 229 QRG--TRKSLITQV-CIDESDPKRCVGIGHDLDLTVREDLITFLKENKDSFAWSSANLQG 285
Query: 370 I 370
I
Sbjct: 286 I 286
>At2g15100 putative retroelement pol polyprotein
Length = 1329
Score = 388 bits (996), Expect = e-107
Identities = 256/763 (33%), Positives = 380/763 (49%), Gaps = 75/763 (9%)
Query: 640 FPFFKCLRK-NVVFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSV 698
FPF K + F W CEEAF +LK LS P +L+K G L LY AVS+SA++ V
Sbjct: 616 FPFLHFTAKISKGFIWNESCEEAFKQLKRYLSEPSVLAKREFGEQLFLYIAVSESAVTGV 675
Query: 699 MLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLPL 758
++ + R +++V + RY +EK ALAV+ AR+LRPYFQS P+ V T LPL
Sbjct: 676 QVRVERSDKRPIFYV-------KTRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSLPL 728
Query: 759 RQVLQKPDLSGRLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPDRFERVDTQWTLF 818
R +L P SGRL W++ELSE+ L++ R ++ + T D QW
Sbjct: 729 RTILHSPTQSGRLGKWAIELSEFDLEFRARTSLNS----------TMD----TSRQWGFI 774
Query: 819 VDGSSNSSGSGAGVALEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLL 878
+ + S A A GE +A+ + A L L REV R
Sbjct: 775 KTWVRSRNLSDAPTANRYSGEY---------------EAKDACMEAYLNLVREVSGRFEQ 819
Query: 879 IR-TDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVV----VEYVP-RAENQRAD 932
T EN L RV + T+ Q + + +V RA +R D
Sbjct: 820 FELTRIPRAENSAANALAALASTFEVTLPRVIPVETISQPSIRLDEISFVTTRAMRRRLD 879
Query: 933 ALAKLASTRKPGNNKSVIQETLAYPSIEGELMSCVNR-----------GRTWMDPIIS-I 980
A + + G+++ + +E + + + G W +PI I
Sbjct: 880 AQSAENGLHQLGDDEEISDAVHPTEIVENQSLPDNHNAPLPDQPPHDWGADWREPIRDYI 939
Query: 981 LAGDPAEVEQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCA 1040
L G + ++ + + + + + LYRR FS P C+ E+ +M EVH+G C
Sbjct: 940 LNGTLPAEKWAARKLKATCARFCIANDILYRRIFSAPDAVCIFGEQTRTVMKEVHDGTCG 999
Query: 1041 SHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFA 1100
+H GGRSLA KV + G+YWPTL DC + ++C++CQ A L P + L T+SAP+PF
Sbjct: 1000 NHTGGRSLAFKVRKYGYYWPTLVADCEAYARKCEQCQKHAPLILQPAELLTTVSAPYPFM 1059
Query: 1101 MWGVDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPR 1160
W +D+VGP + T+ +EA + IT ++ NF WK I+CR G+P
Sbjct: 1060 KWLMDIVGPLHVS--------------TRGVEAAAYSNITHVQVWNFIWKDIICRHGLPY 1105
Query: 1161 AIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKG 1220
IV+DNG+QF S Q FC+E I++ ++ +PQ NGQ E+ N+ I+ L+++L KG
Sbjct: 1106 EIVTDNGSQFISEQFEVFCEEWQIRLSHSTPRYPQGNGQAEAMNKTIISNLKKKLNAYKG 1165
Query: 1221 AWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWR--TRPGFEEENQAN 1278
AW EL VLW+ TT + T ETPF + YG++A++P EI + R P E EN
Sbjct: 1166 AWFGELQNVLWAVRTTPRRATDETPFSLIYGMEAVIPAEIKVPSARRIRNPQNETENNEM 1225
Query: 1279 MAVELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVLKW----RSGAPGNK 1334
+ +D + E R+ A R A +NS VR R +VG LVL+ ++ K
Sbjct: 1226 IIDVIDTIDERRNRALARMQNYHNAGARYYNSNVRNRSFEVGTLVLRRVQQNKAEKGAGK 1285
Query: 1335 LTPNWEGPYRIVKVLGNGAYHLEELDGRRLPRSFNGLSLRYFY 1377
L +WEGPY+I V+ NG Y L ++G+ + R++N + L+ FY
Sbjct: 1286 LGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSMHLKRFY 1328
Score = 188 bits (477), Expect = 2e-47
Identities = 90/151 (59%), Positives = 113/151 (74%)
Query: 367 MPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLA 426
M GI I H L ++P+ KPV Q RR+LG D+ +AV EV +LL IREVKYP WLA
Sbjct: 412 MTGISTEVISHELNVDPTFKPVKQKRRKLGPDRAQAVNIEVVRLLEVGRIREVKYPEWLA 471
Query: 427 NVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQI 486
N V+VKK NGKWR+CVD+TDLNKAC KD +PLP ID LV+ +G+E+LS MDA+SGY+QI
Sbjct: 472 NPVVVKKKNGKWRVCVDFTDLNKACSKDFFPLPHIDRLVESTTGHEMLSFMDAFSGYNQI 531
Query: 487 RMHPADEDKTAFMTARVNYCYRTMPFGLKNA 517
M+P D++KT+F+T Y Y+ MPFGLKNA
Sbjct: 532 LMNPEDQEKTSFITECGTYYYKVMPFGLKNA 562
Score = 34.3 bits (77), Expect = 0.51
Identities = 19/47 (40%), Positives = 25/47 (52%)
Query: 220 VLKVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKV 266
V V + V A+YNVI+G L + V ST H VK+P GK+
Sbjct: 366 VKMVEFTVFDRPAAYNVILGTPWLYEMKVVPSTYHQCVKFPTPVGKM 412
>At2g14400 putative retroelement pol polyprotein
Length = 1466
Score = 387 bits (994), Expect = e-107
Identities = 182/322 (56%), Positives = 245/322 (75%)
Query: 392 RRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKAC 451
RR+LG ++ KAV EVDKLL IREV+YP WLAN V+VKK NGK R+C+D+TDLNKAC
Sbjct: 469 RRKLGVERAKAVNDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKAC 528
Query: 452 PKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMP 511
PKDS+PLP ID LV+ +GNELLS MDA+SGY+QI M+P D++KT F+T R YCY+ MP
Sbjct: 529 PKDSFPLPHIDRLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMP 588
Query: 512 FGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMR 571
FGL+NAGATY RL++++F+ VG+ MEVY+DDM++KS++ DH + LEE F + ++ M+
Sbjct: 589 FGLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMK 648
Query: 572 LNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRF 631
LNP KC+FGV G+FLG+++T RGIE NP + A M SP N KEVQRLTGRIAAL+RF
Sbjct: 649 LNPAKCTFGVPSGEFLGYIVTKRGIEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRF 708
Query: 632 LPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVS 691
+ +S D+S PF++ L+ N F W +CEEAF +LK L+SPP+L KP L+LY +VS
Sbjct: 709 ISRSTDKSLPFYQILKGNKEFLWDEKCEEAFGQLKAYLTSPPVLFKPELDEKLYLYVSVS 768
Query: 692 DSALSSVMLQEIDGEHRIVYFV 713
+ A+S V+++E GE + +Y++
Sbjct: 769 NHAVSGVLIREDRGEQKPIYYI 790
Score = 277 bits (708), Expect = 3e-74
Identities = 177/548 (32%), Positives = 273/548 (49%), Gaps = 94/548 (17%)
Query: 874 IRSLLIRTDS-------QLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRA 926
+ +LIR D ++ NQ G ++ KD + YL V+ L F++ + +PR
Sbjct: 772 VSGVLIREDRGEQKPIYYIIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKFELIRIPRG 831
Query: 927 ENQRADALAKLASTRKPGNNKSVIQETLAYPSIEGELMSCV---------NRGRTWMD-P 976
+N ADALA LAST P N + E ++ SI+ E + V +RG T ++ P
Sbjct: 832 QNTTADALAALASTSDPEVNSIIPVECISERSIKEEKEAFVVTRSRAAARDRGDTAVELP 891
Query: 977 IISILAGDPAEV--------------EQCTKEQQREASHYTLID---------------G 1007
+ A V E+ + + EA +D
Sbjct: 892 PVKRRKSKEATVPKPAVQENIGIELIEEVISDAKIEAETEPWVDEDILAPNEHPEPEALN 951
Query: 1008 HLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDCM 1067
LYRRG S P L + E +MSEVHEG+C SH GR++A K+ + +YWPT+ DC+
Sbjct: 952 SLYRRGVSDPYLLSIFGPVVEIVMSEVHEGLCGSHSSGRAMAFKIKKMCYYWPTMITDCV 1011
Query: 1068 DFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTARAQMKFILVAVDYF 1127
+ ++CK CQ+ A L P + ++SAP+PF W +D++GP + ++++LV DYF
Sbjct: 1012 KYAQRCKRCQLHAPLIHQPSELFSSISAPYPFMRWSMDIIGPLHRSTRGVQYLLVLTDYF 1071
Query: 1128 TKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMGIQMR 1187
+KWIEAE + ++N+ GI++
Sbjct: 1072 SKWIEAEAI-------LLNW-----------------------------------GIKVS 1089
Query: 1188 FASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLWSYNTTEQSTTRETPFR 1247
++++ +PQ NGQ E+AN+ IL L++RL KG W DEL VLW+Y TT + +T ETPF
Sbjct: 1090 YSTLRYPQGNGQAEAANKTILSNLKKRLNHLKGGWYDELQPVLWAYRTTPRRSTGETPFS 1149
Query: 1248 MTYGVDAMLPVEID--NFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQRVA 1305
+ YG+ A++P E++ P E+EN A + LD ++E RD+A I+ + A
Sbjct: 1150 LVYGMKAVVPAELNVPGLRRTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNYQHAAA 1209
Query: 1306 AKFNSRVRVRDMQVGDLVLKW----RSGAPGNKLTPNWEGPYRIVKVLGNGAYHLEELDG 1361
+NS+V+ R VGD VLK + KL NWEGPY + +V+ NG Y L++L+
Sbjct: 1210 RYYNSKVKSRPFFVGDYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYRLKDLED 1269
Query: 1362 RRLPRSFN 1369
R + R +N
Sbjct: 1270 RPVQRPWN 1277
Score = 43.1 bits (100), Expect = 0.001
Identities = 35/148 (23%), Positives = 66/148 (43%), Gaps = 13/148 (8%)
Query: 51 EEERADTKGKKKQESAAIATKGADDTFAQHSGP-PVGTI---NTIAGGFGGGG------- 99
E+E+ + KQ A+ ++ GP G + N + F G G
Sbjct: 320 EDEKESFAKRDKQAKPAVTFPPKKFEPRENQGPRKFGLLPFNNNVGKQFQGKGRSNTWIR 379
Query: 100 DTHAARKRHVRAVNSVHEVA--FGFVHPDITISMADFEGIKPHKDDPIVVQLRMNSFNIR 157
D + K+H R V+ ++ F I + + ++ DD +VV L + +F +
Sbjct: 380 DESSVIKKHSRNVHLKLSLSEEVDFQSTSILFDEKETQHLERSHDDALVVTLDVANFEVS 439
Query: 158 RVLLDQGSSADIIYGDAFDKLGLTDNDL 185
R+L+D GSS D+I+ +++G++ D+
Sbjct: 440 RILIDTGSSVDLIFLSTLERMGISRADV 467
>At2g14380 putative retroelement pol polyprotein
Length = 764
Score = 358 bits (918), Expect = 2e-98
Identities = 170/289 (58%), Positives = 219/289 (74%), Gaps = 1/289 (0%)
Query: 366 DMPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWL 425
DM GIDP CH L ++P+ K V Q RR+LG ++ KAV EVDKLL A I EVKYP WL
Sbjct: 476 DMVGIDPEVACHELNVDPTFKLVKQKRRKLGPERSKAVNDEVDKLLDAGSIVEVKYPEWL 535
Query: 426 ANVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQ 485
AN V+VKK N KWR+C+D+TDLNKACPKDS+PLP ID +V+ +GNELLS MDA+SGY+Q
Sbjct: 536 ANPVVVKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATTGNELLSFMDAFSGYNQ 595
Query: 486 IRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMI 545
I MH D++KT+F+ R YCY+ MPFGLKN GA YQRL++++FA Q+G+ MEVY+DDM+
Sbjct: 596 IPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGKTMEVYIDDML 655
Query: 546 VKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKA 605
VKS R DH L+ F + K++M+LNP KC FGV G+FLG+++T RGIE NP++ +A
Sbjct: 656 VKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKRGIEANPKQIRA 715
Query: 606 IQQMKSPSNVKEVQRLTGRIAALSRFLPKSGDRSFPFFKCLRK-NVVFE 653
I ++SP N KEVQRLTGRIA L+RF+ +S D+S PF++ LR N FE
Sbjct: 716 ILDLQSPRNKKEVQRLTGRIAGLNRFIARSTDKSLPFYQLLRSANKTFE 764
Score = 95.9 bits (237), Expect = 1e-19
Identities = 73/297 (24%), Positives = 131/297 (43%), Gaps = 25/297 (8%)
Query: 1 WCEFHRSAGHDTDDCRTLQR---------EIDKLIRAGYQGNRQGQWRNGGDQNKA---- 47
+C+FH+ +GH T CR LQ +I+ R N R G D N
Sbjct: 186 YCDFHKRSGHSTAACRHLQSILLNKYKKGDIEVQHRQYKSHNNTYAARGGRDGNNVFHRL 245
Query: 48 --HKREEERADTKGKKKQESAAIATKGADDTFAQHSGPPVGT--INTIAGGFGGGGDTHA 103
H ++ A ++++ K + QH+ PV +N I GG D+
Sbjct: 246 GPHTGRQQEAPPANEEERHPDMEPPKKNRENDQQHNDAPVPRRRVNMIMGGLTACRDSFR 305
Query: 104 ARKRHVR--AVNSVHEVAFGFVHPDITISMADFEGIKPHKDDPIVVQLRMNSFNIRRVLL 161
+ K +++ A A + P +T + D G+ +DP+V++L + + R+L+
Sbjct: 306 SIKEYIKSGAATLWSSPATKEMTP-LTFTSEDLFGVDLPHNDPLVIELHIGESEVTRILI 364
Query: 162 DQGSSADIIYGDAFDKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVL 221
D GSS ++++ D K+ + D + P L GF G +M G I L G
Sbjct: 365 DTGSSVNVVFKDVLQKMKVHDRHIKPSVRPLTGFDGNTMMTNGTIKLPIYLG----GAAT 420
Query: 222 KVRYLVLQVVASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGRLKVDQKMARE 278
+++V+ YN+I+G ++ + A+ S+ H +K P S G + ++ +Q +A +
Sbjct: 421 WHKFVVVDKPTIYNIILGTPWIHDMQAIPSSYHQCIKIPTSIG-IETIRGNQNLAHD 476
>At1g37200 hypothetical protein
Length = 1564
Score = 335 bits (859), Expect = 1e-91
Identities = 250/747 (33%), Positives = 368/747 (48%), Gaps = 98/747 (13%)
Query: 1 WCEFHRSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGD---QNKAHKREEERADT 57
+C++H GH T++CR ++ KLI AG G+ + G + + +EE
Sbjct: 323 YCKYHNKRGHSTEECRAVK----KLIAAG------GKTKKGSNPKVETPPPDEQEEEQTP 372
Query: 58 KGKKKQESAAIATKGADDTFAQHSGPPVGT--INTIAGGFGGGGDTHAARKRHVRAVNSV 115
K KK++ + +G D S PP I+ + GG T R V S
Sbjct: 373 KQKKRERTL----EGGD------SPPPARRERIDLVFTELDLGGKTG----RSVTTPPSA 418
Query: 116 -HEVAFGFVHPDITISMADFEGIKPHKDDPIVVQLRMNSFNIRRVLLDQGSSADIIYGDA 174
H+ F + E + P + D I+ ++ + +I + Q + G +
Sbjct: 419 PHKKNMRFPLRLSKFCRSATEHLSPKRIDFIMGGSQLCNDSINSIKTHQRKADSYTKGKS 478
Query: 175 F-----DKLGLTDNDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLKVRYLVLQ 229
K+ L +++ T DLD + R+ Y + +
Sbjct: 479 LMMGPDHKITLWESETT--------------------DLDKPHDDAIVIRIDVGNYKLSR 518
Query: 230 VV---------ASYNVIIGRNTLNRLCAVISTAHLAVKYPLSSGKVGRLKVDQKMARECY 280
++ A +N I+GR L+ + AV ST H +K+P G + + Q+ +R CY
Sbjct: 519 IMIDTGSSVDKAPFNAILGRPWLHAMKAVPSTYHQCIKFPSEKG-IAVIYGSQRSSRRCY 577
Query: 281 NNCLNLYGKKSALVGHRCYEIEASDENLDPRGEGRVNRPT---PIEETKALKFGDRT--- 334
L KK+ LV + ++ L R + P+ P + + + D +
Sbjct: 578 MGSYELI-KKAELV------VLMIEDKLAEMKTVRSSDPSQCGPQKSSITQVYIDESDPK 630
Query: 335 --LKIGTRLTEEQETRLTKLLGENLDLFAWSCKDMPGIDPNFICHRLALNPSVKPVSQLR 392
+ +G L L EN D FAWS ++ GI H L ++P+ +P+ Q R
Sbjct: 631 QCVGVGQDLDPAIREDFITFLKENKDSFAWSSANLQGISLEVTSHELNVDPTYRPIKQKR 690
Query: 393 RRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKWRMCVDYTDLNKACP 452
R+LG ++ KAVQ EVD+LL IREVKYP WLAN V+VK NGKWR+C+D+ DLNKACP
Sbjct: 691 RKLGPERAKAVQDEVDRLLKIGSIREVKYPDWLANPVVVKNKNGKWRVCIDFMDLNKACP 750
Query: 453 KDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPF 512
KDS+PLP ID LV +G+ELLS MDA+SGY+QI M P D++KTAF+T CY+ MPF
Sbjct: 751 KDSFPLPHIDRLVKATAGHELLSFMDAFSGYNQILMRPDDQEKTAFITD----CYKVMPF 806
Query: 513 GLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRL 572
GLKN GATYQRL++R+FA Q+G+ ME+Y+DDM+VKS DH L E F + K M+L
Sbjct: 807 GLKNTGATYQRLVNRMFADQLGKTMELYIDDMLVKSAHEKDHLPQLRECFKILNKFEMKL 866
Query: 573 NPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFL 632
NPEKCSFGV G+FLG+++T RGIE NP++ A M SP ++ R R +
Sbjct: 867 NPEKCSFGVPSGEFLGYLVTQRGIEANPKQIAAFIDMPSPKMARD--RPYRRPQQVIYRA 924
Query: 633 PKSGDRSFPFFKCLRKNVVFEWTAECEEAFV--------RLKELLSSPPIL---SKPIQG 681
P + P + + + E E +L++ L S PI+ S+PI+
Sbjct: 925 PPDHEGQKPIYYVSKTLIDAETHYRAMEKLALAVVMSARKLRQYLQSHPIVVMTSQPIR- 983
Query: 682 HPLHLYFAVSDSALSSVMLQEIDGEHR 708
LH S A ++ L E D E+R
Sbjct: 984 TILHSTTQSSRLAKWAIELSEYDIEYR 1010
Score = 303 bits (776), Expect = 4e-82
Identities = 182/523 (34%), Positives = 276/523 (51%), Gaps = 64/523 (12%)
Query: 710 VYFVSHTLQGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTDLPLRQVLQKPDLSG 769
+Y+VS TL AE Y+ +EK ALAV+++AR+LR Y QS P+ V T P+R +L S
Sbjct: 934 IYYVSKTLIDAETHYRAMEKLALAVVMSARKLRQYLQSHPIVVMTSQPIRTILHSTTQSS 993
Query: 770 RLVAWSVELSEYGLQYDKRGTVGAQSLADFVVELTPDRFERVDT--QWTLFVDGSSNSSG 827
RL W++ELSEY ++Y R + AQ LADFV+EL + ++ +W L VDGSSN G
Sbjct: 994 RLAKWAIELSEYDIEYRTRTSFKAQVLADFVIELPLADLDGTNSNKKWLLHVDGSSNRQG 1053
Query: 828 SGAGVALEGPGELVLEQSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLLIRTDSQLVE 887
SG G+ L P V+EQS + F A+NN++EYEALI G+KLA+ ++IR + +DSQLV
Sbjct: 1054 SGEGIQLTSPTGEVIEQSFRLGFNASNNESEYEALIDGIKLAQGMRIRDIHAHSDSQLVT 1113
Query: 888 NQVKGTFQVKDPNLIKYLERVRYLMTLFQEVVVEYVPRAENQRADALAKLASTRKPGNNK 947
+Q G ++ KD + YLE V+ L F+ + +PR EN DALA LAST P +
Sbjct: 1114 SQFHGEYEAKDERMEAYLELVKTLTQQFESFELTRIPRGENTSTDALAALASTLDPFVKR 1173
Query: 948 SVIQETLAYPSIEGEL------------MSCVNRGRT----------------------- 972
+ E + +PSI+ + + V R T
Sbjct: 1174 IIPVEGIEHPSIDLTVKHAGMETSATCNFTRVTRSTTAAARALAAAAEAGAAEEEAKLRT 1233
Query: 973 --------------WMDPIIS-ILAGDPAEVEQCTKEQQREASHYTLIDGHLYRRGFSTP 1017
W PII I G + T++ + +++ Y +++G L +R + P
Sbjct: 1234 PEQLASYEPEPYNDWRIPIIDYIERGITPPDKWETRKLKAQSARYCIMEGRLMKRSVAGP 1293
Query: 1018 LLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQ 1077
+ C ++ + +M +HEG C SH GR+L C +L DC+ +C +CQ
Sbjct: 1294 YMVCTYGQQTKDLMKSMHEGQCGSHYSGRTLRCIML----------ADCIAHSLRCDKCQ 1343
Query: 1078 VFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTA--RAQMKFILVAVDYFTKWIEAEP 1135
A PP+E+ ++S+P+PF W +D+V P + + ++K +LV DY TKWIE +
Sbjct: 1344 RHAPTLHQPPEEMSSISSPYPFMKWSMDVVRPMEASGGKKRLKNLLVLTDYSTKWIEGKA 1403
Query: 1136 LAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREF 1178
++T ++ F + IV R GIP IV+DNG +++ F
Sbjct: 1404 FQQVTEKQVEVFLLENIVYRHGIPYEIVTDNGLTSPREKSKHF 1446
Score = 56.2 bits (134), Expect = 1e-07
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 1284 DLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVLKW----RSGAPGNKLTPNW 1339
D + E RD A I+ +Q +NS +++R +VG+LVL+ KL NW
Sbjct: 1465 DFIDERRDHAMIQVQNYQQPAVRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTNW 1524
Query: 1340 EGPYRIVKVLGNGAYHLEEL-DGRRLPRSFNGLSLRYFY 1377
EGPYRI +V+ +G Y L ++ +G R +N + L+ ++
Sbjct: 1525 EGPYRITEVVRDGIYKLVKVFNGVPELRPWNAMHLKKYH 1563
>At4g03800
Length = 637
Score = 325 bits (833), Expect = 1e-88
Identities = 165/336 (49%), Positives = 230/336 (68%), Gaps = 21/336 (6%)
Query: 367 MPGIDPNFICHRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLA 426
MP IDP+ ICH L ++P KP+ Q RR+LG ++ KAV ++DKLL IREV+YP W+A
Sbjct: 321 MPDIDPSIICHELNVDPRFKPLKQKRRKLGVERAKAVNGKIDKLLKIGSIREVQYPDWVA 380
Query: 427 NVVMVKKANGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQI 486
V+VKK NGK R+C+D+TDLNKACPKDS+PLP ID LV+ +GNELL+ MDA+ GY+QI
Sbjct: 381 ITVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMDAFLGYNQI 440
Query: 487 RMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIV 546
M+P D++KT+F+T R GATYQ L++++F + + MEV +DD +V
Sbjct: 441 MMNPEDQEKTSFITDR---------------GATYQWLVNKMFNEHLRKTMEVSIDDTLV 485
Query: 547 KSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAI 606
KS++ DH + L E F + ++ M+LN KC+FGV G+FLG+++T RGIE NP + A
Sbjct: 486 KSLKKEDHVKHLGECFEILNQYQMKLNLAKCTFGVPSGEFLGYIVTKRGIEANPNQINAF 545
Query: 607 QQMKSPSNVKEVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLK 666
+ S N KEVQRLTGRIA+ +S D+S PF++ L+ N F W +CEEAF +LK
Sbjct: 546 LKTPSLRNFKEVQRLTGRIAS------RSTDKSLPFYQILKGNNGFLWDEKCEEAFRQLK 599
Query: 667 ELLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQE 702
L++PP+LSKP L+LY VS+ A+S V+++E
Sbjct: 600 AYLTTPPVLSKPEADEKLYLYVFVSNHAVSGVLVRE 635
Score = 64.3 bits (155), Expect = 5e-10
Identities = 68/262 (25%), Positives = 115/262 (42%), Gaps = 37/262 (14%)
Query: 6 RSAGHDTDDCRTLQREIDKLIRAGYQGNRQGQWRNGGDQNKAHKREEERADTKGKKKQES 65
R H T DC L+R + +L +G N D K + + ++T+ K+
Sbjct: 77 RVTEHLTKDCIVLKRYLAELWASGDLSKF-----NIDDFVKQYHEARDNSETQNSKRPRL 131
Query: 66 AAIATKGADDTFAQHSGPPVGTINTIAGGFGGGGDTHAARKRH---VRAVNSVHEVAFGF 122
T + G IN I GG ++ +A K+H V +S+ E +
Sbjct: 132 ----------TNEEEPRSSKGKINVILGGSKLCHNSVSAIKKHRPNVLLKSSLSEEV-NY 180
Query: 123 VHPDITISMADFEGIKPHKDDPIVVQLRMNSFNIRRVLLDQGSSADIIYGDAFDKLGLTD 182
++ + I+ DD +++ L + +F I R+L+D GSS D+I+
Sbjct: 181 QCSSVSFDEEETRHIERPHDDALIITLDVANFKISRILVDTGSSVDLIF----------- 229
Query: 183 NDLTPYAGTLVGFAGEQVMVRGYIDLDTIFGEDECARVLKVRYLVLQVVASYNVIIGRNT 242
L P LV F E M G I L + G + +++ V ++V A+YN+I+G
Sbjct: 230 --LGP-PSPLVAFTSESAMSLGTIKLPVLAG--KMSKI--VDFVVFDKPATYNIILGTPW 282
Query: 243 LNRLCAVISTAHLAVKYPLSSG 264
+ ++ AV ST H +K+P S+G
Sbjct: 283 IFQMKAVPSTYHQWLKFPTSNG 304
>At2g13230 pseudogene
Length = 353
Score = 231 bits (589), Expect = 2e-60
Identities = 126/358 (35%), Positives = 201/358 (55%), Gaps = 28/358 (7%)
Query: 904 YLERVRYLMTLFQEVVVEYVPRAENQRADALAKLASTRKPGNNKSVIQETLAYPSIEGEL 963
YL V+ F E + +PR EN ADALA LAST + + E + PSIE +
Sbjct: 4 YLALVQDHAKQFHEFKLTRIPRGENTSADALAALASTSDLNMRRVIPVEFIEKPSIELDK 63
Query: 964 MS-------------------CVNRGRTWMDPIISILAGDPAEVEQC-TKEQQREASHYT 1003
+ + W++PI + ++ +++ ++ + EA+ +
Sbjct: 64 VEHAFPIQVVAGYEDASDNSPSLGCDSEWIEPIRNFISKRKVRLDKWEARKLKAEAARFV 123
Query: 1004 LIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLR 1063
L++ L++ S PL+ CV E +M EVH G C ++ GGR+LA K+ R G++WPT+
Sbjct: 124 LVEEKLFKWRLSGPLMTCVEKEAARKVMKEVHGGSCGNNSGGRALAIKIKRLGYFWPTMI 183
Query: 1064 KDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWGVDLVGPFPTARAQMKFILVA 1123
KDC ++CQ A P + L ++++P+P W +D++GP ++ Q K +LV
Sbjct: 184 KDC-------EKCQRNAPTIHLPAELLSSIASPYPLMRWSMDIIGPMHASK-QKKLVLVL 235
Query: 1124 VDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMG 1183
DYF+K EAE A I A++ +F WK I+CR G+P IV+DNG+QF S++ + FC + G
Sbjct: 236 TDYFSKLREAESYASIKEAQVESFMWKHILCRHGVPYEIVTDNGSQFISTRFQGFCDKWG 295
Query: 1184 IQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLWSYNTTEQSTT 1241
I++ ++ + Q NGQ ++AN+ IL GL++RL KG+W+DEL VLWS+ TT + T
Sbjct: 296 IRLSKSTPRYLQGNGQADAANKTILDGLKKRLTAKKGSWVDELEGVLWSHRTTPRRAT 353
>At2g10780 pseudogene
Length = 1611
Score = 229 bits (583), Expect = 1e-59
Identities = 147/493 (29%), Positives = 243/493 (48%), Gaps = 16/493 (3%)
Query: 379 LALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKW 438
+ L P P+S+ R+ + +++++++LL FIR P W A V+ VKK +G +
Sbjct: 651 IELEPGTTPISKAPYRMAPAEMAKLKKQLEELLDKGFIRPSSSP-WGAPVLFVKKKDGSF 709
Query: 439 RMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAF 498
R+C+DY LNK K+ YPLP ID L+D G + S +D SGYHQI + P D KTAF
Sbjct: 710 RLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAF 769
Query: 499 MTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDL 558
T ++ + MPFGL NA A + ++M+ VF + + ++++D++V S H + L
Sbjct: 770 RTRYDHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFINDILVYSKSWEAHQEHL 829
Query: 559 EEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEV 618
+R+H + KCSF + FLG +I+ +G+ ++PEK ++I++ P N E+
Sbjct: 830 RAVLERLREHELFAKLSKCSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEI 889
Query: 619 QRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKP 678
+ G RF+ + P + K+ F W+ ECE++F+ LK +L++ P+L P
Sbjct: 890 RSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLTNAPVLVLP 949
Query: 679 IQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTA 738
+G P +Y S L V++Q + ++ + S L+ E Y + AV+
Sbjct: 950 EEGEPYTVYTDASIVGLGCVLMQ----KGSVIAYASRQLRKHEKNYPTHDLEMAAVVFFL 1005
Query: 739 RRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAWSVELSEYGLQY-----DKRGTVG 792
+ R Y V++ TD L+ + +P+L+ R W +++Y L
Sbjct: 1006 KIWRSYLYGAKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYNLDIAYHPGKANQVAD 1065
Query: 793 AQSLADFVVELTPDRFERVDTQWTLFVDGSSNS---SGSGAGVALEGPGELVLEQSLKFE 849
A S VE + + V+ TL V+ S G GA + + L Q E
Sbjct: 1066 ALSRRRSEVEAERSQVDLVNMMGTLHVNALSKEVEPLGLGAADQADLLSRIRLAQERDEE 1125
Query: 850 FK--ATNNQAEYE 860
K A NN+ EY+
Sbjct: 1126 IKGWAQNNKTEYQ 1138
Score = 106 bits (264), Expect = 1e-22
Identities = 138/564 (24%), Positives = 235/564 (41%), Gaps = 49/564 (8%)
Query: 815 WTLFVDGSSNSSGSGAGVALEGPGELVL---EQSLKFEFKATNNQAEYEALIAGLKLARE 871
+T++ D S G G L G ++ Q K E + E A++ LK+ R
Sbjct: 955 YTVYTDASI----VGLGCVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFFLKIWRS 1010
Query: 872 VKIRSLL-IRTDSQLVENQVKGTFQVKDPNLIKYLERVRYLMTLFQE--VVVEYVPRAEN 928
+ + I TD + +K F + NL R R M L + + + Y P N
Sbjct: 1011 YLYGAKVQIYTDHK----SLKYIFTQPELNL-----RQRRWMELVADYNLDIAYHPGKAN 1061
Query: 929 QRADALAKLASTRKPGNNKSVIQE---TLAYPSIEGELMSCVNRGRTWMDPIISILAGDP 985
Q ADAL++ S + ++ + TL ++ E+ D + I
Sbjct: 1062 QVADALSRRRSEVEAERSQVDLVNMMGTLHVNALSKEVEPLGLGAADQADLLSRIRLAQE 1121
Query: 986 AEVEQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKY--EAIMSEVHEGVCASHI 1043
+ E Q + + T +G + G CV ++ E I+ E H+ + H
Sbjct: 1122 RDEEIKGWAQNNKTEYQTSNNGTIVVNG-----RVCVPNDRALKEEILREAHQSKFSIHP 1176
Query: 1044 GGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAP-WPFAMW 1102
G + + L+ ++W ++KD +V +C CQ+ + P L + P W +
Sbjct: 1177 GSNKMY-RDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVPSGLLQNLPIPEWKWDHI 1235
Query: 1103 GVDLVGPFPTA-RAQMKFILVAVDYFTKWIEAEPLAKITSAKIV-NFYWKRIVCRFGIPR 1160
+D V PT +++ + V VD TK ++ A+I+ Y IV GIP
Sbjct: 1236 TMDFVTGLPTGIKSKHNAVWVVVDRLTKSAHFMAISDKDGAEIIAEKYIDEIVRLHGIPV 1295
Query: 1161 AIVSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKG 1220
+IVSD T+F+S + F K +G ++ ++ HPQT+ Q E + + LR + + G
Sbjct: 1296 SIVSDRDTRFTSKFWKAFQKALGTRVNLSTAYHPQTDEQSERTIQTLEDMLRACVLDWGG 1355
Query: 1221 AWLDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMA 1280
W L V ++YN + Q++ +P+ YG P+ W T G E +
Sbjct: 1356 NWEKYLRLVEFAYNNSFQASIGMSPYEALYGRACRTPL-----CW-TPVG---ERRLFGP 1406
Query: 1281 VELDLLSETRDEAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVLKWRSGAPG-------N 1333
+D +E I+ + R + N R + + QVGDLV G
Sbjct: 1407 TIVDETTERMKFLKIKLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRK 1466
Query: 1334 KLTPNWEGPYRIVKVLGNGAYHLE 1357
KL+P + GPY++++ +G AY L+
Sbjct: 1467 KLSPRYVGPYKVIERVGAVAYKLD 1490
>At4g10580 putative reverse-transcriptase -like protein
Length = 1240
Score = 225 bits (573), Expect = 2e-58
Identities = 133/407 (32%), Positives = 212/407 (51%), Gaps = 6/407 (1%)
Query: 379 LALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKW 438
+ L P P+S+ R+ + +++++ LL FIR P W A V+ VKK +G +
Sbjct: 483 IELEPGTAPLSKAPYRMAPAEMAELKKQLKDLLGKGFIRPSTSP-WGAPVLFVKKKDGSF 541
Query: 439 RMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAF 498
R+C+DY +LN+ K+ YPLP ID L+D G S +D SGYHQI + AD KTAF
Sbjct: 542 RLCIDYRELNRVTVKNRYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEADVRKTAF 601
Query: 499 MTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDL 558
T ++ + MPFGL NA A + RLM+ VF + + +++DD++V S + L
Sbjct: 602 RTRYGHFEFVVMPFGLTNAPAVFMRLMNSVFQEFLDEFVIIFIDDILVYSKSPEEQEVHL 661
Query: 559 EEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEV 618
++R+ + KCSF + FLG ++++ G+ ++PEK +AI+ P+N E+
Sbjct: 662 RRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEAIRDWPRPTNATEI 721
Query: 619 QRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKP 678
+ G RF+ + P K K+V F W+ ECEE FV LKE+L+S P+L+ P
Sbjct: 722 RSFLGWAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSQECEEGFVSLKEMLTSTPVLALP 781
Query: 679 IQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTA 738
G P +Y S L V++Q +++ + S L E Y + AV+
Sbjct: 782 EHGQPYMVYTDASRVGLGCVLMQ----HGKVIAYASRQLMKHEGNYPTHDLEMAAVIFAL 837
Query: 739 RRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAWSVELSEYGLQ 784
+ R Y V+V TD L+ + +P+L+ R W +++Y L+
Sbjct: 838 KIWRSYLYGGKVQVFTDHKSLKYIFTQPELNLRQRRWMELVADYDLE 884
Score = 30.4 bits (67), Expect = 7.3
Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Query: 1053 LRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAP-WPFAMWGVDLVGPFP 1111
L+ + W ++ D ++V +C CQ+ + L ++ P W + +DLV
Sbjct: 965 LKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPEWKWDFITMDLVVGLR 1024
Query: 1112 TARAQMKFILVAVDYFTKWIEAEPLAKITSAKIV-NFYWKRIVCRFGIPRAI--VSDNGT 1168
+R + I V VD TK + K A ++ + IV G+P + D
Sbjct: 1025 VSRTK-DAIWVIVDRLTKSAHFLAIRKTDGAAVLAKKFVSEIVKLHGVPLNMKEAQDRQR 1083
Query: 1169 QFSSSQTREFCKEMG--IQMRFASVEHP 1194
++ + RE E+G + ++ A + P
Sbjct: 1084 SYADKRRRELEFEVGDRVYLKMAMLRGP 1111
>At2g04670 putative retroelement pol polyprotein
Length = 1411
Score = 222 bits (565), Expect = 1e-57
Identities = 131/407 (32%), Positives = 211/407 (51%), Gaps = 6/407 (1%)
Query: 379 LALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKW 438
+ L P P+S+ R+ + ++++++ LL FIR P W A V+ VKK +G +
Sbjct: 509 IELEPGTAPLSKAPYRMAPAEMTELKKQLEDLLGKGFIRPSTSP-WGAPVLFVKKKDGSF 567
Query: 439 RMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAF 498
R+C+DY LN K+ YPLP ID L+D G S +D SGYHQI + AD KTAF
Sbjct: 568 RLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHQIPIAEADVRKTAF 627
Query: 499 MTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDL 558
T ++ + MPF L NA A + RLM+ VF + + +++DD++V S +H L
Sbjct: 628 RTRYGHFEFVVMPFALTNAPAAFMRLMNSVFQEFLDEFVIIFIDDILVYSKSPEEHEVHL 687
Query: 559 EEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEV 618
++R+ + KCSF + FLG ++++ G+ ++PEK +AI+ P+N E+
Sbjct: 688 RRVMEKLREQKLFAKLSKCSFWQREIGFLGHIVSAEGVSVDPEKIEAIRDWPRPTNATEI 747
Query: 619 QRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKP 678
+ RF+ + P K K+V F W+ ECEE FV LKE+L+S P+L+ P
Sbjct: 748 RSFLRLTGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSLKEMLTSTPVLALP 807
Query: 679 IQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTA 738
G P +Y S L V++Q +++ + S L+ E Y + V+
Sbjct: 808 EHGQPYMVYTDASRVGLGCVLMQ----RGKVIAYASRQLRKHEGNYPTHDLEMAVVIFAL 863
Query: 739 RRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAWSVELSEYGLQ 784
+ R Y V+V TD L+ + +P+L+ R + W +++Y L+
Sbjct: 864 KIWRSYLYGGKVQVFTDHKSLKYIFNQPELNLRQMRWMELVADYDLE 910
Score = 103 bits (256), Expect = 9e-22
Identities = 138/583 (23%), Positives = 231/583 (38%), Gaps = 99/583 (16%)
Query: 823 SNSSGSGAGVALEGPGELVL---EQSLKFEFKATNNQAEYEALIAGLKLAREVKIRSLLI 879
+++S G G L G+++ Q K E + E +I LK+ R S L
Sbjct: 817 TDASRVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAVVIFALKIWR-----SYLY 871
Query: 880 RTDSQLVENQVKGTFQVKDPNLIKYLERVRYL-MTLFQEVVVEYVPRAENQRADALAKLA 938
Q+ + + P L L ++R++ + ++ + Y P N ADAL++
Sbjct: 872 GGKVQVFTDHKSLKYIFNQPEL--NLRQMRWMELVADYDLEIAYHPGKANVVADALSRKR 929
Query: 939 STRKPGNNKS-------------VIQETLAYPSIEGELMSCVNRGRTWMDPIISILAGDP 985
PG + V +E L +++ + R R + ++A
Sbjct: 930 VGAAPGQSVEALVSEIGALRLCVVAREPLGLEAVDRA--DLLTRARLAQEKDEGLIAASK 987
Query: 986 AEVEQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCV--SPEKYEAIMSEVHEGVCASHI 1043
AE E Q A+ + G + CV E I+SE H + + H
Sbjct: 988 AE----GSEYQFAANGTIFVYGRV-----------CVPKDEELRREILSEAHASMFSIHP 1032
Query: 1044 GGRSLACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWG 1103
G + + L+ + W +++D ++V +C CQ LV P A+W
Sbjct: 1033 GATKMY-RDLKRYYQWVGMKRDVANWVAECDVCQ------------LVKAEHQVPDAIW- 1078
Query: 1104 VDLVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSAKIV-NFYWKRIVCRFGIPRAI 1162
V +D TK + K A ++ Y IV G+P +I
Sbjct: 1079 ------------------VIMDRLTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSI 1120
Query: 1163 VSDNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAW 1222
VSD ++F+ + R F +MG +++ ++ HPQT+GQ E + + LR + + G W
Sbjct: 1121 VSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHPQTDGQSERTIQTLEDMLRMCVLDWGGHW 1180
Query: 1223 LDELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAVE 1282
D L V ++YN + Q++ PF YG P+ R+ G
Sbjct: 1181 ADHLSLVEFAYNNSYQASIGMAPFEALYGRPCWTPLRWTQVEERSIYG------------ 1228
Query: 1283 LDLLSETRDEAHIRETAMKQ---RVAAKFNSRVRVRDMQVGDLVLKWRSGAPG------- 1332
D + ET + + + MK+ R + + R R + +VGD V + G
Sbjct: 1229 ADYVQETTERIRVLKLNMKEAQARQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSILE 1288
Query: 1333 NKLTPNWEGPYRIVKVLGNGAYHLEELD-GRRLPRSFNGLSLR 1374
KL+P + GP+RIV+ +G AY LE D R + F+ L LR
Sbjct: 1289 TKLSPRYMGPFRIVERVGPVAYRLELPDVMRAFHKVFHVLMLR 1331
>At2g14650 putative retroelement pol polyprotein
Length = 1328
Score = 213 bits (542), Expect = 6e-55
Identities = 128/407 (31%), Positives = 208/407 (50%), Gaps = 18/407 (4%)
Query: 379 LALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKW 438
+ L P P+S+ R+ + ++++++ LL A V+ VKK +G +
Sbjct: 470 IELEPGTAPLSKAPYRMAPAEMAELKKQLEDLLGAP-------------VLFVKKKDGSF 516
Query: 439 RMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAF 498
R+C+DY LN K+ YPLP ID L+D G S +D SGYH I + AD KTAF
Sbjct: 517 RLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHLIPIAEADVRKTAF 576
Query: 499 MTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDL 558
T ++ + MPFGL NA A + RLM+ VF + + +++DD++V S +H L
Sbjct: 577 RTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFVIIFIDDILVYSKSLEEHEVHL 636
Query: 559 EEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEV 618
++R+ + KCSF + FLG ++++ G+ ++PEK +AI+ +P+N E+
Sbjct: 637 RRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEAIRDWHTPTNATEI 696
Query: 619 QRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKP 678
+ G RF+ + P K K+V F W+ ECEE FV LKE+L+S P+L+ P
Sbjct: 697 RSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSLKEMLTSTPVLALP 756
Query: 679 IQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTA 738
G P +Y S L V++Q +++ + S L+ E Y + AV+
Sbjct: 757 EHGEPYMVYTDASGVGLGCVLMQ----RGKVIAYASRQLRKHEGNYPTHDLEMAAVIFAL 812
Query: 739 RRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAWSVELSEYGLQ 784
+ R Y V+V TD L+ + +P+L+ R W +++Y L+
Sbjct: 813 KIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQRQWMELVADYDLE 859
Score = 100 bits (250), Expect = 4e-21
Identities = 87/312 (27%), Positives = 140/312 (43%), Gaps = 25/312 (8%)
Query: 1064 KDCMDFVKQCKECQVFADLSKAPPKELVTMSAP-WPFAMWGVDLVGPFPTARAQMKFILV 1122
+D ++V +C CQ+ + P L ++ P W + +D V P +R + I V
Sbjct: 941 EDVANWVAECDVCQLVKAEHQVPGGMLQSLPIPEWKWDFITIDFVVGLPVSRTK-DAIWV 999
Query: 1123 AVDYFTKWIEAEPLAKITSAKIV-NFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKE 1181
VD TK + K A ++ Y IV G+P +IVSD ++F+S+ R F E
Sbjct: 1000 IVDRLTKSAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAFQAE 1059
Query: 1182 MGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLWSYNTTEQSTT 1241
MG +++ ++ HPQT GQ E + + LR + + G W D L V ++YN + ++
Sbjct: 1060 MGTKVQMSTAYHPQTYGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYPASI 1119
Query: 1242 RETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMK 1301
PF Y P+ + R+ G D + ET + + + MK
Sbjct: 1120 GMAPFEALYERPCRTPLCLTQVGERSIYG------------ADYVQETTERIRVLKLNMK 1167
Query: 1302 Q---RVAAKFNSRVRVRDMQVGDLVLKWRSGAPG-------NKLTPNWEGPYRIVKVLGN 1351
+ R + + R R + +VGD V + G KL+P + GP+RIV+ +G
Sbjct: 1168 EAQDRQRSYADKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPFRIVERVGP 1227
Query: 1352 GAYHLEELDGRR 1363
AY LE D R
Sbjct: 1228 VAYRLELPDVMR 1239
>At3g11970 hypothetical protein
Length = 1499
Score = 211 bits (538), Expect = 2e-54
Identities = 135/412 (32%), Positives = 217/412 (51%), Gaps = 9/412 (2%)
Query: 377 HRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANG 436
H++ L PV+Q R + + + V+ LL ++ P + + VV+VKK +G
Sbjct: 591 HKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSP-YASPVVLVKKKDG 649
Query: 437 KWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKT 496
WR+CVDY +LN KDS+P+P I+ L+D G + S +D +GYHQ+RM P D KT
Sbjct: 650 TWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKT 709
Query: 497 AFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQ 556
AF T ++ Y MPFGL NA AT+Q LM+ +F + + + V+ DD++V S +H Q
Sbjct: 710 AFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQ 769
Query: 557 DLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVK 616
L++ F +R + + KC+F V ++LG I+++GIE +P K KA+++ P+ +K
Sbjct: 770 HLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLK 829
Query: 617 EVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILS 676
+++ G RF+ G + P L K FEWTA ++AF LK L P+LS
Sbjct: 830 QLRGFLGLAGYYRRFVRSFGVIAGP-LHALTKTDAFEWTAVAQQAFEDLKAALCQAPVLS 888
Query: 677 KPIQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLV 736
P+ + + +V++QE H + Y +S L+G ++ EK LAV+
Sbjct: 889 LPLFDKQFVVETDACGQGIGAVLMQE---GHPLAY-ISRQLKGKQLHLSIYEKELLAVIF 944
Query: 737 TARRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAWSVELSE--YGLQY 785
R+ R Y ++TD L+ +L++ + W +L E Y +QY
Sbjct: 945 AVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQY 996
Score = 101 bits (252), Expect = 3e-21
Identities = 133/565 (23%), Positives = 234/565 (40%), Gaps = 80/565 (14%)
Query: 819 VDGSSNSSGSGAGVALEGPGELVLEQSLKF-EFKATNNQAEYEALIAGLKLAREVKIRS- 876
V+ + G GA + EG + + LK + + + E A+I ++ R ++S
Sbjct: 898 VETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSH 957
Query: 877 LLIRTDSQ----LVENQVKGTFQVKD-PNLIKYLERVRYLMTLFQEVVVEYVPRAENQRA 931
+I+TD + L+E ++ Q + P L+++ + ++Y EN A
Sbjct: 958 FIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEF------------DYEIQYRQGKENVVA 1005
Query: 932 DALAKLASTRKPGNNKSVIQETLAYPSIEGELMSCVNRGR---TWMDPIISILAGDPAEV 988
DAL+++ + V+ +A +E +L+ + G + + II+ L DP
Sbjct: 1006 DALSRVEGSE-------VLH--MAMTVVECDLLKDIQAGYANDSQLQDIITALQRDP--- 1053
Query: 989 EQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSL 1048
++ Y ++ RR + ++ + I+ +H H GR +
Sbjct: 1054 ---------DSKKYFSWSQNILRR--KSKIVVPANDNIKNTILLWLHGSGVGGH-SGRDV 1101
Query: 1049 ACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWG---VD 1105
+ ++ FYW + KD +++ C CQ A P L + P P +W +D
Sbjct: 1102 THQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL--PIPDTIWSEVSMD 1159
Query: 1106 LVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSA-KIVNFYWKRIVCRFGIPRAIVS 1164
+ P + + I+V VD +K L+ SA + + Y + G P +IVS
Sbjct: 1160 FIEGLPVSGGKT-VIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVS 1218
Query: 1165 DNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLD 1224
D F+S REF G+ ++ S HPQ++GQ E NR + LR + W
Sbjct: 1219 DRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSK 1278
Query: 1225 ELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAVELD 1284
L + YNT S++R TPF + YG + PV + PG ++ +AV
Sbjct: 1279 WLALAEYWYNTNYHSSSRMTPFEIVYG--QVPPVHLPYL-----PG-----ESKVAVVAR 1326
Query: 1285 LLSETRD-----EAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL----KWRSGA----P 1331
L E D + H+ + + A + R+ ++GD V +R +
Sbjct: 1327 SLQEREDMLLFLKFHLMRAQHRMKQFA--DQHRTEREFEIGDYVYVKLQPYRQQSVVMRA 1384
Query: 1332 GNKLTPNWEGPYRIVKVLGNGAYHL 1356
KL+P + GPY+I+ G AY L
Sbjct: 1385 NQKLSPKYFGPYKIIDRCGEVAYKL 1409
>At1g36590 hypothetical protein
Length = 1499
Score = 211 bits (538), Expect = 2e-54
Identities = 135/412 (32%), Positives = 217/412 (51%), Gaps = 9/412 (2%)
Query: 377 HRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANG 436
H++ L PV+Q R + + + V+ LL ++ P + + VV+VKK +G
Sbjct: 591 HKIKLLEGSNPVNQRPYRYSIHQKNEIDKLVEDLLTNGTVQASSSP-YASPVVLVKKKDG 649
Query: 437 KWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKT 496
WR+CVDY +LN KDS+P+P I+ L+D G + S +D +GYHQ+RM P D KT
Sbjct: 650 TWRLCVDYRELNGMTVKDSFPIPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKT 709
Query: 497 AFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQ 556
AF T ++ Y MPFGL NA AT+Q LM+ +F + + + V+ DD++V S +H Q
Sbjct: 710 AFKTHSGHFEYLVMPFGLTNAPATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQ 769
Query: 557 DLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVK 616
L++ F +R + + KC+F V ++LG I+++GIE +P K KA+++ P+ +K
Sbjct: 770 HLKQVFEVMRANKLFAKLSKCAFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLK 829
Query: 617 EVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILS 676
+++ G RF+ G + P L K FEWTA ++AF LK L P+LS
Sbjct: 830 QLRGFLGLAGYYRRFVRSFGVIAGP-LHALTKTDAFEWTAVAQQAFEDLKAALCQAPVLS 888
Query: 677 KPIQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLV 736
P+ + + +V++QE H + Y +S L+G ++ EK LAV+
Sbjct: 889 LPLFDKQFVVETDACGQGIGAVLMQE---GHPLAY-ISRQLKGKQLHLSIYEKELLAVIF 944
Query: 737 TARRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAWSVELSE--YGLQY 785
R+ R Y ++TD L+ +L++ + W +L E Y +QY
Sbjct: 945 AVRKWRHYLLQSHFIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQY 996
Score = 95.9 bits (237), Expect = 1e-19
Identities = 132/565 (23%), Positives = 232/565 (40%), Gaps = 80/565 (14%)
Query: 819 VDGSSNSSGSGAGVALEGPGELVLEQSLKF-EFKATNNQAEYEALIAGLKLAREVKIRS- 876
V+ + G GA + EG + + LK + + + E A+I ++ R ++S
Sbjct: 898 VETDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSH 957
Query: 877 LLIRTDSQ----LVENQVKGTFQVKD-PNLIKYLERVRYLMTLFQEVVVEYVPRAENQRA 931
+I+TD + L+E ++ Q + P L+++ + ++Y EN A
Sbjct: 958 FIIKTDQRSLKYLLEQRLNTPIQQQWLPKLLEF------------DYEIQYRQGKENVVA 1005
Query: 932 DALAKLASTRKPGNNKSVIQETLAYPSIEGELMSCVNRGR---TWMDPIISILAGDPAEV 988
DAL+++ + V+ +A +E +L+ + G + + II+ L DP
Sbjct: 1006 DALSRVEGSE-------VLH--MAMTVVECDLLKDIQAGYANDSQLQDIITALQRDP--- 1053
Query: 989 EQCTKEQQREASHYTLIDGHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSL 1048
++ Y ++ RR + ++ + I+ +H H GR +
Sbjct: 1054 ---------DSKKYFSWSQNILRR--KSKIVVPANDNIKNTILLWLHGSGVGGH-SGRDV 1101
Query: 1049 ACKVLRAGFYWPTLRKDCMDFVKQCKECQVFADLSKAPPKELVTMSAPWPFAMWG---VD 1105
+ ++ FY + KD +++ C CQ A P L + P P +W +D
Sbjct: 1102 THQRVKGLFYSKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL--PIPDTIWSEVSMD 1159
Query: 1106 LVGPFPTARAQMKFILVAVDYFTKWIEAEPLAKITSA-KIVNFYWKRIVCRFGIPRAIVS 1164
+ P + + I+V VD +K L+ SA + Y + G P +IVS
Sbjct: 1160 FIEGLPVSGGKT-VIMVVVDRLSKAAHFIALSHPYSALTVAQAYLDNVFKLHGCPTSIVS 1218
Query: 1165 DNGTQFSSSQTREFCKEMGIQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLD 1224
D F+S REF G+ ++ S HPQ++GQ E NR + LR + W
Sbjct: 1219 DRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSK 1278
Query: 1225 ELPAVLWSYNTTEQSTTRETPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAVELD 1284
L + YNT S++R TPF + YG + PV + PG ++ +AV
Sbjct: 1279 WLALAEYWYNTNYHSSSRMTPFEIVYG--QVPPVHLPYL-----PG-----ESKVAVVAR 1326
Query: 1285 LLSETRD-----EAHIRETAMKQRVAAKFNSRVRVRDMQVGDLVL----KWRSGA----P 1331
L E D + H+ + + A + R+ ++GD V +R +
Sbjct: 1327 SLQEREDMLLFLKFHLMRAQHRMKQFA--DQHRTEREFEIGDYVYVKLQPYRQQSVVMRA 1384
Query: 1332 GNKLTPNWEGPYRIVKVLGNGAYHL 1356
KL+P + GPY+I+ G AY L
Sbjct: 1385 NQKLSPKYFGPYKIIDRCGEVAYKL 1409
>At2g07660 putative retroelement pol polyprotein
Length = 949
Score = 210 bits (535), Expect = 4e-54
Identities = 117/366 (31%), Positives = 193/366 (51%), Gaps = 5/366 (1%)
Query: 379 LALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANGKW 438
+ L P P+S+ R+ + +++++++LLA FIR P W A V+ VKK +G +
Sbjct: 146 IELEPGTTPISKAPYRMAPAEMAELKKQLEELLAKGFIRPSSSP-WGAPVLFVKKKDGSF 204
Query: 439 RMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKTAF 498
R+C+DY LNK K+ YPLP ID L+D G + S +D SGYHQI + P D KTAF
Sbjct: 205 RLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAF 264
Query: 499 MTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQDL 558
T ++ + MPFGL NA A + ++M+ VF + + +++DD++V S H + L
Sbjct: 265 RTRYGHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVHSKSWEAHQEHL 324
Query: 559 EEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVKEV 618
+R+H + K SF + FLG +I+ +G+ ++PEK ++I++ P N E+
Sbjct: 325 RAVLERLREHELFAKLSKFSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEI 384
Query: 619 QRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILSKP 678
+ G RF+ + P + K+ F W+ ECE++F+ LK +L + P+L P
Sbjct: 385 RSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLINAPVLVLP 444
Query: 679 IQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLVTA 738
+G P +Y S L V++Q + ++ + S L+ E Y + AV+
Sbjct: 445 EEGEPYTVYTDASIVGLGCVLMQ----KGSVIAYASRQLRKHEKNYPTHDLEMAAVVFAL 500
Query: 739 RRLRPY 744
+ R Y
Sbjct: 501 KIWRSY 506
Score = 108 bits (269), Expect = 3e-23
Identities = 104/414 (25%), Positives = 183/414 (44%), Gaps = 29/414 (7%)
Query: 956 YPSIEGELMSCVNRGRTWMDPIISILAGDPAEVEQCTKEQQREASHYTLIDGHLYRRGFS 1015
YP+ + E+ + V + W +I + E++ T + E + T +G + G
Sbjct: 486 YPTHDLEMAAVVFALKIWRSYLIRLAQERDEEIKGWTLNNKTE--YQTSNNGTIVVNG-- 541
Query: 1016 TPLLKCVSPEKY--EAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDCMDFVKQC 1073
CV ++ E I+ E H+ + H G + + L+ ++W +RKD +V +C
Sbjct: 542 ---RVCVPNDRALKEEILREAHQSKFSIHPGSNKMY-RDLKRYYHWVGMRKDVARWVAKC 597
Query: 1074 KECQVFADLSKAPPKELVTMS-APWPFAMWGVDLVGPFPTA-RAQMKFILVAVDYFTKWI 1131
CQ+ + P L + + W + +D V PT +++ + V VD TK
Sbjct: 598 PTCQLVKAEHQVPSGLLQNLPISEWKWDHITMDFVTRLPTGIKSKHNAVWVVVDRLTKSA 657
Query: 1132 EAEPLAKITSAKIV-NFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFAS 1190
++ A+I+ Y I+ GIP +IVSD T+F+S F K +G ++ ++
Sbjct: 658 HFMAISDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLST 717
Query: 1191 VEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTY 1250
HPQT+GQ E + + LR + + G W L + ++YN + Q++ +P+ Y
Sbjct: 718 AYHPQTDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALY 777
Query: 1251 GVDAMLPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQRVAAKFNS 1310
G P+ W T G E + +D +E I+ + R + N
Sbjct: 778 GRACRTPL-----CW-TPVG---ERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYANK 828
Query: 1311 RVRVRDMQVGDLVLKWRSGAPG-------NKLTPNWEGPYRIVKVLGNGAYHLE 1357
R + + QVGDLV G KL+P + GPY++++ +G AY L+
Sbjct: 829 RRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKLD 882
>At2g13060 pseudogene
Length = 930
Score = 184 bits (468), Expect = 2e-46
Identities = 117/384 (30%), Positives = 186/384 (47%), Gaps = 17/384 (4%)
Query: 951 QETLAYPSIEGELMSCVNRGRTWMDPIISILAGDPAEVEQCT----KEQQREASHYTLID 1006
+ T + S E ++ V + W I++ LA D E + T K RE Y +
Sbjct: 116 ESTRKWSSTENCAVTAVEKDYPWYADIVNYLAAD-VEPDNFTDYNKKRFLREIRRYQWDE 174
Query: 1007 GHLYRRGFSTPLLKCVSPEKYEAIMSEVHEGVCASHIGGRSLACKVLRAGFYWPTLRKDC 1066
+LY+ + +C++ + +I+S H H KVL+A F+WPT+ +D
Sbjct: 175 PYLYKHSYDGIYRRCIAATEVPSILSHCHSSSYGGHFATFKTVSKVLQADFWWPTMFRDT 234
Query: 1067 MDFVKQCKECQVFADLSKA---PPKELVTMSAPWPFAMWGVDLVGPFPTARAQMKFILVA 1123
F+ QC CQ +SK PP + + F WG+D +GPFP + + +ILV
Sbjct: 235 QKFISQCDPCQRRGKISKRNEMPPNFRLEVEV---FDRWGIDFMGPFPPSNKNL-YILVD 290
Query: 1124 VDYFTKWIEAEPLAKITSAKIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMG 1183
VDY +KW+EA K SA ++ + I RFG+PR ++SD F + + + G
Sbjct: 291 VDYVSKWVEAIASLKNDSAVVMKLFKSIIFPRFGVPRIVISDGDKHFINKILEKLLLQYG 350
Query: 1184 IQMRFASVEHPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLWSYNTTEQSTTRE 1243
+Q R A+ HPQT+GQVE +NR I L + + +AK W +L LW+Y T ++
Sbjct: 351 VQHRVATPYHPQTSGQVEVSNRQIKEILEKTVGKAKKEWSYKLYDALWAYKTAFKTPLGT 410
Query: 1244 TPFRMTYGVDAMLPVEIDN-FTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQ 1302
TPF + YG LPVE+++ W + + A + ELD E R A+ K+
Sbjct: 411 TPFHLLYGKACHLPVELEHKAAWAVKMMNFDIKSAGES-ELD---EIRIHAYDNSKLYKE 466
Query: 1303 RVAAKFNSRVRVRDMQVGDLVLKW 1326
R A + ++ R + D +L++
Sbjct: 467 RTKAYHDKKILTRTFEPNDQILRF 490
>At2g06890 putative retroelement integrase
Length = 1215
Score = 184 bits (467), Expect = 3e-46
Identities = 116/373 (31%), Positives = 187/373 (50%), Gaps = 11/373 (2%)
Query: 422 PTWLANVVMVKKA----NGKWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLM 477
P + N V K+ +G WRMC D +N K +P+P +D ++D G+ + S +
Sbjct: 449 PAYRTNPVETKELQRQKDGSWRMCFDCRAINNVTVKYCHPIPRLDDMLDELHGSSIFSKI 508
Query: 478 DAYSGYHQIRMHPADEDKTAFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNM 537
D SGYHQIRM+ DE KTAF T Y + MPFGL +A +T+ RLM+ V +G +
Sbjct: 509 DLKSGYHQIRMNEGDEWKTAFKTKHGLYEWLVMPFGLTHAPSTFMRLMNHVLRAFIGIFV 568
Query: 538 EVYVDDMIVKSVRGLDHHQDLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIE 597
VY DD++V S +H + L+ +RK + N +KC+F FLGF++++ G++
Sbjct: 569 IVYFDDILVYSESLREHIEHLDSVLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVK 628
Query: 598 INPEKCKAIQQMKSPSNVKEVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAE 657
++ EK KAI+ SP V EV+ G RF P + ++K+V F+W
Sbjct: 629 VDEEKVKAIRDWPSPKTVGEVRSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKA 688
Query: 658 CEEAFVRLKELLSSPPILSKPIQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTL 717
EEAF LK+ L++ P+L + S + +V++Q + +++ F S L
Sbjct: 689 QEEAFQSLKDKLTNAPVLILSEFLKTFEIECDASGIGIGAVLMQ----DQKLIAFFSEKL 744
Query: 718 QGAEVRYQKIEKAALAVLVTARRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAW-- 774
GA + Y +K A++ +R + Y + TD L+ + + L+ R W
Sbjct: 745 GGATLNYPTYDKELYALVRALQRWQHYLWPKVFVIHTDHESLKHLKGQQKLNKRHARWVE 804
Query: 775 SVELSEYGLQYDK 787
+E Y ++Y K
Sbjct: 805 FIETFAYVIKYKK 817
Score = 38.1 bits (87), Expect = 0.035
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 1244 TPFRMTYGVDAMLPVEIDNFTWRTRPGFEEENQANMAVELDLLSETRDEAHIRETAMKQR 1303
+PF++ YG + + P ++ R + + +A +L+ + + A +
Sbjct: 988 SPFQIVYGFNPISPFDLIPLPLSERVSIDGKKKA------ELVQQIHENARRNIEEKTKL 1041
Query: 1304 VAAKFNSRVRVRDMQVGDLVL----KWRSGAPG-NKLTPNWEGPYRIVKVLGNGAYHLEE 1358
A + N R + +VGD+V K R A +KL P +GP++I+K + + AY L+
Sbjct: 1042 YAKQANKGRREQIFEVGDMVWIHLRKERFPAQRKSKLMPRIDGPFKIIKRINDNAYQLDL 1101
Query: 1359 LD 1360
D
Sbjct: 1102 QD 1103
>At1g35370 hypothetical protein
Length = 1447
Score = 179 bits (453), Expect = 1e-44
Identities = 125/412 (30%), Positives = 208/412 (50%), Gaps = 17/412 (4%)
Query: 377 HRLALNPSVKPVSQLRRRLGGDKGKAVQQEVDKLLAAEFIREVKYPTWLANVVMVKKANG 436
H++ L PV+Q R + + + V ++ + I+ P + + VV+VKK +G
Sbjct: 570 HKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMIKSGTIQVSSSP-FASPVVLVKKKDG 628
Query: 437 KWRMCVDYTDLNKACPKDSYPLPSIDSLVDGASGNELLSLMDAYSGYHQIRMHPADEDKT 496
WR+CVDYT+LN KD + +P I+ L+D G+ + S +D +GYHQ+RM P D KT
Sbjct: 629 TWRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSVVFSKIDLRAGYHQVRMDPDDIQKT 688
Query: 497 AFMTARVNYCYRTMPFGLKNAGATYQRLMDRVFARQVGRNMEVYVDDMIVKSVRGLDHHQ 556
AF T ++ Y M FGL NA AT+Q LM+ VF + + + V+ DD+++ S +H +
Sbjct: 689 AFKTHNGHFEYLVMLFGLTNAPATFQSLMNSVFRDFLRKFVLVFFDDILIYSSSIEEHKE 748
Query: 557 DLEEAFGEIRKHSMRLNPEKCSFGVQGGKFLGFMITSRGIEINPEKCKAIQQMKSPSNVK 616
L F +R H + F + LG I++R IE +P K +A+++ +P+ VK
Sbjct: 749 HLRLVFEVMRLHKL--------FAKGSKEHLGHFISAREIETDPAKIQAVKEWPTPTTVK 800
Query: 617 EVQRLTGRIAALSRFLPKSGDRSFPFFKCLRKNVVFEWTAECEEAFVRLKELLSSPPILS 676
+V+ G RF+ G + P L K F W+ E + AF LK +L + P+L+
Sbjct: 801 QVRGFLGFAGYYRRFVRNFGVIAGP-LHALTKTDGFCWSLEAQSAFDTLKAVLCNAPVLA 859
Query: 677 KPIQGHPLHLYFAVSDSALSSVMLQEIDGEHRIVYFVSHTLQGAEVRYQKIEKAALAVLV 736
P+ + + +V++Q+ H + Y +S L+G ++ EK LA +
Sbjct: 860 LPVFDKQFMVETDACGQGIRAVLMQK---GHPLAY-ISRQLKGKQLHLSIYEKELLAFIF 915
Query: 737 TARRLRPYFQSFPVKVRTD-LPLRQVLQKPDLSGRLVAWSVELSE--YGLQY 785
R+ R Y ++TD L+ +L++ + W +L E Y +QY
Sbjct: 916 AVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYEIQY 967
Score = 101 bits (252), Expect = 3e-21
Identities = 90/347 (25%), Positives = 158/347 (44%), Gaps = 30/347 (8%)
Query: 1020 KCVSPEKYEAIMSEVHEGVCASHIGGRS---LACKVLRAGFYWPTLRKDCMDFVKQCKEC 1076
K V P E I +++ + + S +GGRS + + +++ FYW + KD F++ C C
Sbjct: 1042 KIVVPNDVE-ITNKLLQWLHCSGMGGRSGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTC 1100
Query: 1077 QVFADLSKAPPKELVTMSAPWPFAMW---GVDLVGPFPTARAQMKFILVAVDYFTKWIEA 1133
Q + A P L + P P +W +D + P + + I+V VD +K
Sbjct: 1101 QQCKSDNAAYPGLLQPL--PIPDKIWCDVSMDFIEGLPNSGGK-SVIMVVVDRLSKAAHF 1157
Query: 1134 EPLAKITSA-KIVNFYWKRIVCRFGIPRAIVSDNGTQFSSSQTREFCKEMGIQMRFASVE 1192
LA SA + + + G P +IVSD F+S +EF K G+++R +S
Sbjct: 1158 VALAHPYSALTVAQAFLDNVYKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSAY 1217
Query: 1193 HPQTNGQVESANRVILRGLRRRLAEAKGAWLDELPAVLWSYNTTEQSTTRETPFRMTYGV 1252
HPQ++GQ E NR + LR W LP + YNT S+++ TPF + YG
Sbjct: 1218 HPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYG- 1276
Query: 1253 DAMLPVEIDNFTWRTR-----PGFEEENQANMAVELDLLSETRDEAHIRETAMKQRVAAK 1307
P+ + +++ +E + ++ L+ R + +++ A + R
Sbjct: 1277 -QAPPIHLPYLPGKSKVAVVARSLQERENMLLFLKFHLM---RAQHRMKQFADQHRTERT 1332
Query: 1308 FN----SRVRVRDMQVGDLVLKWRSGAPGNKLTPNWEGPYRIVKVLG 1350
F+ V+++ + +VL+ KL+P + GPY+I++ G
Sbjct: 1333 FDIGDFVYVKLQPYRQQSVVLR-----VNQKLSPKYFGPYKIIEKCG 1374
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,751,288
Number of Sequences: 26719
Number of extensions: 1328651
Number of successful extensions: 3593
Number of sequences better than 10.0: 151
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 3236
Number of HSP's gapped (non-prelim): 269
length of query: 1377
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1265
effective length of database: 8,326,068
effective search space: 10532476020
effective search space used: 10532476020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0029b.1