BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0019a.6
(1380 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31210 putative reverse transcriptase 870 0.0
At1g53810 830 0.0
At4g10690 retrotransposon like protein 829 0.0
At4g02960 putative polyprotein of LTR transposon 769 0.0
At4g28900 putative protein 760 0.0
At1g44510 polyprotein, putative 758 0.0
At1g59265 polyprotein, putative 745 0.0
At1g58889 polyprotein, putative 743 0.0
At4g16870 retrotransposon like protein 736 0.0
At1g70010 hypothetical protein 587 e-167
At3g61330 copia-type polyprotein 551 e-156
At4g14460 retrovirus-related like polyprotein 545 e-155
At1g60020 hypothetical protein 542 e-154
At2g07010 putative retroelement pol polyprotein 496 e-140
At2g14930 pseudogene 444 e-124
At1g48710 hypothetical protein 368 e-101
At1g58140 hypothetical protein 353 4e-97
At2g20460 putative retroelement pol polyprotein 345 1e-94
At2g24660 putative retroelement pol polyprotein 328 2e-89
At4g23160 putative protein 305 2e-82
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 870 bits (2249), Expect = 0.0
Identities = 540/1408 (38%), Positives = 746/1408 (52%), Gaps = 110/1408 (7%)
Query: 17 ITVKLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLF 76
+T+KL N+LLW Q ++L +Q L V+ V PS+ L PNPL+
Sbjct: 17 VTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNGEVTSE---EPNPLY 73
Query: 77 VQWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQL 136
W D+ V S L +L+EE L + +T+R +W +L + + ARE LR LQL
Sbjct: 74 ESWFCTDQLVRSWLFGTLSEEVLGHVHNLSTSRQIWVSLAENFNKSSVAREFSLRQNLQL 133
Query: 137 MRRGSLSVSEYGRKIR*----------SVANDDKVHWFLRGLGPSYANFST---GQLDQV 183
+ + S Y R+ + V K+ FL GLG Y +T L ++
Sbjct: 134 LSKKEKPFSVYCREFKTICDALSSIGKPVDESMKIFGFLNGLGRDYDPITTVIQSSLSKL 193
Query: 184 PLPLFTDILWKVESHAIFQASLEDYVTPPSAAFH-ARNPTRS-SGSQSSGGGHRGNSSSG 241
P P F D++ +V+ F + L+ Y S H A N RS SGS +G SG
Sbjct: 194 PTPTFNDVVSEVQG---FDSKLQSYEEAASVTPHLAFNIERSESGSPQYNPNQKGRGRSG 250
Query: 242 SRPRRDNGGSHCRG-----------SYTPRCQLCRKQGHYAAKCPVRWDRPSESANLTHS 290
R + RG P CQ+C + GH A KC R+D N
Sbjct: 251 QNKGRGGYSTRGRGFSQHQSSPQVSGPRPVCQICGRTGHTALKCYNRFDN-----NYQAE 305
Query: 291 FAAGCSLNNSNRSDK--YMDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIG 348
A +L S+ + K + D+ AT+H+T S + L + Y G+D VLVG+G L ITH G
Sbjct: 306 IQAFSTLRVSDDTGKEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTG 365
Query: 349 S---RSASHSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGK 405
S +S++ +PL+ VLVVP + +L+SVSKL D+ F+A+ I + QT V+
Sbjct: 366 STTIKSSNGKIPLNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTT 425
Query: 406 GPCDKGFYVLDQGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSSILP 465
GP G YVL+ L ++ A+ E+WH RL H N ++ L ++
Sbjct: 426 GPRRNGLYVLENQEFVALYSNRQCA-ATEEVWHHRLGHANSKALQHLQNSKAIQINKSRT 484
Query: 466 KPICCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQ 525
P+C CQM KS RL + R LD +HCDLWGPSPV S G Y+ IFVDD+S+
Sbjct: 485 SPVC-EPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSR 543
Query: 526 FTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHR 585
++WFYPL KS+F V + F+ VENQ + +KVFQSD G EF +NK++ S G+ HR
Sbjct: 544 YSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHR 603
Query: 586 FLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQ 645
CP+T QNG ERKHRH++ELGL+ML+HSH +WV +F TA YIINR+PS VL +
Sbjct: 604 ISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNL 663
Query: 646 IPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPT 705
P++ LF P Y++ FG +PCLRP +NKF PR C+FLGYNS +KG++CF P
Sbjct: 664 SPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPP 723
Query: 706 TSRTYVSRHAQFDEFCFPLTGSKSSPNDLVVFTFYEPAAGSPPSLQPVILVVPESSPPTG 765
T + Y+SR+ F+E P K LV P +P + E S P
Sbjct: 724 TGKVYISRNVIFNESELPF---KEKYQSLV------PQYSTPLLQAWQHNKISEISVPAA 774
Query: 766 PLPCPSCVDPDVQPVPVDDAPPSPVPHNDAPPLPAPTSPTPPATPLVVTQAPPTSPPTTP 825
P+ S +P+ ++ S V P PTS + V +P
Sbjct: 775 PVQLFS------KPIDLNTYAGSQVTEQLTD--PEPTSNNEGSDEEV-------NPVAEE 819
Query: 826 PAVTQVPLAPVDARPRTRS*NGIFKPNPRYALVHAQPTGLLTALHTVT*PKGFKSAMKHP 885
A Q + A TRS GI KPN RYAL+ T+ PK SAMKHP
Sbjct: 820 IAANQEQVINSHAM-TTRSKAGIQKPNTRYALI--------TSRMNTAEPKTLASAMKHP 870
Query: 886 HWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGTVERLKTCLVAQGLT 945
W A+ +E++ +H TW+LVP N++ SK VF+TK H DG++++LK LVA+G
Sbjct: 871 GWNEAVHEEINRVHMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFD 930
Query: 946 QIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLTETVYMEQPHGF 1005
Q G DY TFSPVV+ T+RL+L + + QLDV NAFLHG L E V+M QP GF
Sbjct: 931 QEEGVDYLETFSPVVRTATIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGF 990
Query: 1006 VD------------LVSRLMCVG*TRLSTASNRRLVLGF----SA*ALFSCVLVFRVVGL 1049
+D + L T SN L GF S +LF C
Sbjct: 991 IDPQKPTHVCRLTKAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVC--------- 1041
Query: 1050 IHPCSFFYKGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLEI 1109
++ LYLL+YVDDI+LTGSD SLL + L + F++K LG YFLG++I
Sbjct: 1042 -------HQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSMKDLGPPRYFLGIQI 1094
Query: 1110 TYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHLVSSGEGYSDPTHYRSLVGAL 1169
A+GLFL YA D+L A M + + + TPL ++S E +++PT++RSL G L
Sbjct: 1095 EDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQQLDNLNS-ELFAEPTYFRSLAGKL 1153
Query: 1170 QYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAVLGY 1229
QYLTITRPD+ +AVN + Q + +PT F +KRI+RY+ GL +R S+ + Y
Sbjct: 1154 QYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGMGLPIKRNSTLTLSAY 1213
Query: 1230 SDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELVWLL 1289
SD+D A C + RRST G+ I LG NL+SWSAK+QP+V++SS E+EYRA+ A E+ W+
Sbjct: 1214 SDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAEYRALTYAAREITWIS 1273
Query: 1290 NLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVRHV 1349
LL +L + P DN SA++++ NP H +KH D D H++RE V+ G + +H+
Sbjct: 1274 FLLRDLGIPQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLIETQHI 1333
Query: 1350 PTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
+ QLAD+FTK LPR F RSKL V
Sbjct: 1334 SATFQLADVFTKSLPRRAFVDLRSKLGV 1361
>At1g53810
Length = 1522
Score = 830 bits (2144), Expect = 0.0
Identities = 533/1457 (36%), Positives = 751/1457 (50%), Gaps = 139/1457 (9%)
Query: 17 ITVKLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPA--PNP 74
+TV LN N++LW Q + L Q L V ++ P++ S H+ V + PNP
Sbjct: 15 VTVTLNQQNYILWKSQFESFLSGQGLLGFVTGSISAPAQ-----TRSVTHNNVTSEEPNP 69
Query: 75 LFVQWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDEL 134
F W D+ V S LL S E+ LS ++ T+ VW L + + + +R L+ L
Sbjct: 70 EFYTWHQTDQVVKSWLLGSFAEDILSVVVNCFTSHQVWLTLANHFNRVSSSRLFELQRRL 129
Query: 135 QLMRRGSLSVSEYGRKIR*----------SVANDDKVHWFLRGLGPSYANFST---GQLD 181
Q + + ++ + + ++ V K+ L GLG Y T +D
Sbjct: 130 QTLEKKDNTMEVFLKDLKHICDQLASVGSPVPEKMKIFSALNGLGREYEPIKTTIENSVD 189
Query: 182 QVPLPLFTDILWKVESHAIFQASLEDYVTPPSAAFH-ARNPTRSSGS---QSSGGGHRGN 237
P ++ K+ + L+ YVT P+ + H A N T S ++ G R N
Sbjct: 190 SNPSLSLDEVASKLRG---YDDRLQSYVTEPTISPHVAFNVTHSDSGYYHNNNRGKGRSN 246
Query: 238 SSSGSRPRRDNG-GSHCRGSYTPR---------CQLCRKQGHYAAKCPVRWDRPSESANL 287
S SG G G H + S T CQ+C K GH+A KC R+D + +L
Sbjct: 247 SGSGKSSFSTRGRGFHQQISPTSGSQAGNSGLVCQICGKAGHHALKCWHRFDNSYQHEDL 306
Query: 288 THSFAAG--CSLNNSNRSDKYMDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHIT 345
+ A + + + + D+ A++H+T++ L S Y G+D ++V +G L IT
Sbjct: 307 PMALATMRITDVTDHHGHEWIPDSAASAHVTNNRHVLQQSQPYHGSDSIMVADGNFLPIT 366
Query: 346 HIGS---RSASHSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAV 402
H GS S+S +PL VLV P + +L+SVSKLT D+ F+ADS I ++ T +
Sbjct: 367 HTGSGSIASSSGKIPLKEVLVCPDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKL 426
Query: 403 LGKGPCDKGFYVLDQGS-QALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVS 461
L G G Y L++ Q L +T + AS E+WH RL H N ++ LH+L
Sbjct: 427 LVMGRNRDGLYSLEEPKLQVLYSTRQN--SASSEVWHRRLGHANAEV---LHQLASSKSI 481
Query: 462 SILPKPI--CCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIF 519
I+ K + C +C + KS RL + AS L+ +HCDLWGPSP +SV GF Y+V+F
Sbjct: 482 IIINKVVKTVCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFRYYVVF 541
Query: 520 VDDFSQFTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSS 579
+D +S+FTWFYPLK KSDF+ V F+ VENQ +K+FQ D G EF +++
Sbjct: 542 IDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQCDGGGEFISSQFLKHLQD 601
Query: 580 SGVLHRFLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPS 639
G+ CP+T QNG ERKHRH++ELGL+M++ S + YW+ +F TA ++IN +P+
Sbjct: 602 HGIQQNMSCPYTPQQNGMAERKHRHIVELGLSMIFQSKLPLKYWLESFFTANFVINLLPT 661
Query: 640 KVL-SDQIPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKG 698
L +++ P+Q L+ AP Y+ FGC +P LR Y KF PR C+FLGYN +KG
Sbjct: 662 SSLDNNESPYQKLYGKAPEYSALRVFGCACYPTLRDYASTKFDPRSLKCVFLGYNEKYKG 721
Query: 699 FKCFDPTTSRTYVSRHAQFDEFCFPLTGSKSSPNDLVVFTFYEPAAGSP------PSLQP 752
++C P T R Y+SRH FDE P +++ P +P S
Sbjct: 722 YRCLYPPTGRIYISRHVVFDENTHPFES---------IYSHLHPQDKTPLLEAWFKSFHH 772
Query: 753 VILVVPESSP-PTGPLPCPSCVDPDVQPVPVDDAPPSPVPHNDAPP----------LPAP 801
V P+ S P +P P D P V P +D P
Sbjct: 773 VTPTQPDQSRYPVSSIPQPETTDLSAAPASVAAETAGPNASDDTSQDNETISVVSGSPER 832
Query: 802 T-------------SPTPPAT-PLVVTQAPPTSPPTTP--PAVTQVPLAPV--DARPRTR 843
T SPT ++ P +P +SP +P A Q APV + TR
Sbjct: 833 TTGLDSASIGDSYHSPTADSSHPSPARSSPASSPQGSPIQMAPAQQVQAPVTNEHAMVTR 892
Query: 844 S*NGIFKPNPRYALVHAQPTGLLTALHTVT*PKGFKSAMKHPHWLPAMEDELSALHKKFT 903
GI KPN RY LLT ++ PK A+KHP W AM++E+ + T
Sbjct: 893 GKEGISKPNKRYV--------LLTHKVSIPEPKTVTEALKHPGWNNAMQEEMGNCKETET 944
Query: 904 WTLVPRPYTTNVVGSK*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKAT 963
WTLVP NV+GS VFRTK H+DG++++LK LVA+G Q G DY T+SPVV+
Sbjct: 945 WTLVPYSPNMNVLGSMWVFRTKLHADGSLDKLKARLVAKGFKQEEGIDYLETYSPVVRTP 1004
Query: 964 TVRLILSLVVLND*QLHQLDVKNAFLHGHLTETVYMEQPHGFVD-------LVSRLMCVG 1016
TVRLIL + + +L Q+DVKNAFLHG LTETVYM QP GFVD + G
Sbjct: 1005 TVRLILHVATVLKWELKQMDVKNAFLHGDLTETVYMRQPAGFVDKSKPDHVCLLHKSLYG 1064
Query: 1017 *TRLSTA-----SNRRLVLGFSA*ALFSCVLVFRVVGLIHPCSFFY-KGHITLYLLVYVD 1070
+ A SN L GF + L P F Y + + LL+YVD
Sbjct: 1065 LKQSPRAWFDRFSNFLLEFGF-------------ICSLFDPSLFVYSSNNDVILLLLYVD 1111
Query: 1071 DIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLEITYTADGLFLGHAKYAHDLLSH 1130
D+++TG++ LT +A LN EF +K +G++ YFLG++I GLF+ KYA DLL
Sbjct: 1112 DMVITGNNSQSLTHLLAALNKEFRMKDMGQVHYFLGIQIQTYDGGLFMSQQKYAEDLLIT 1171
Query: 1131 ALMLEASHVLTPLAAGSHLVSS-GEGYSDPTHYRSLVGALQYLTITRPDLSYAVNTVSQF 1189
A M S + TPL VS+ E +SDPT++RSL G LQYLT+TRPD+ +AVN V Q
Sbjct: 1172 ASMANCSPMPTPLPLQLDRVSNQDEVFSDPTYFRSLAGKLQYLTLTRPDIQFAVNFVCQK 1231
Query: 1190 LQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAV---------LGYSDADWARCTDH 1240
+ P+V F +KRI+RY+ G+ + SS V YSD+D+A C +
Sbjct: 1232 MHQPSVSDFNLLKRILRYIKGTVSMGIQYNSNSSSVVSAYESDYDLSAYSDSDYANCKET 1291
Query: 1241 RRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELVWLLNLLHELRVRLS 1300
RRS GY F+G N++SWS+KKQP+V+ SS E+EYR+++ TASE+ W+ ++L E+ V L
Sbjct: 1292 RRSVGGYCTFMGQNIISWSSKKQPTVSRSSTEAEYRSLSETASEIKWMSSILREIGVSLP 1351
Query: 1301 APPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVRHVPTSLQLADIFT 1360
P DN SA+++ NP H KH D+D H++RE V+ L V+H+P LQLADIFT
Sbjct: 1352 DTPELFCDNLSAVYLTANPAFHARTKHFDVDHHYIRERVALKTLVVKHIPGHLQLADIFT 1411
Query: 1361 KVLPRPLFDLFRSKLRV 1377
K LP F R KL V
Sbjct: 1412 KSLPFEAFTRLRFKLGV 1428
>At4g10690 retrotransposon like protein
Length = 1515
Score = 829 bits (2142), Expect = 0.0
Identities = 516/1387 (37%), Positives = 735/1387 (52%), Gaps = 109/1387 (7%)
Query: 73 NPLFVQWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRD 132
N F++W D+ V + + SL+EEAL + +A++VW L + + R+ L+
Sbjct: 66 NQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLNSAQEVWLGLARRFNRFSTTRKYDLQK 125
Query: 133 ELQLMRRGSLSVSEYGRKIR*----------SVANDDKVHWFLRGLGPSYANFST---GQ 179
L + ++ Y +++ V +K+ L GLG Y + +T
Sbjct: 126 RLGTCSKAGKTMDAYLSEVKNICDQLDSIGFPVTEQEKIFGVLNGLGKEYESIATVIEHS 185
Query: 180 LDQVPLPLFTDILWKVESHAIFQASLEDYVT----PPSAAFHARNPTRSSGSQSSGGGHR 235
LD P P F D+++K+ + F L Y P AF+ S G+ +S GG
Sbjct: 186 LDVYPGPCFDDVVYKLTT---FDDKLSTYTANSEVTPHLAFYTDKSYSSRGNNNSRGGRY 242
Query: 236 GN-------SSSGSRPRRDNGGSHCRGSYT---PRCQLCRKQGHYAAKCPVRWDRPSESA 285
GN SS G + G GS P CQ+CRK GH A KC R++
Sbjct: 243 GNFRGRGSYSSRGRGFHQQFGSGSNNGSGNGSKPTCQICRKYGHSAFKCYTRFEENYLPE 302
Query: 286 NLTHSFAA-GCSLNNSNRSDKYM-DTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLH 343
+L ++FAA S N S +++ D+ AT+H+T++ L S YSG+D V+VGNG L
Sbjct: 303 DLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLP 362
Query: 344 ITHIGS---RSASHSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTG 400
ITHIG+ + ++PL +VLV P +T +L+SVSKLT D+ F++DS VI++++T
Sbjct: 363 ITHIGTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQ 422
Query: 401 AVLGKGPCDKGFYVL-DQGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFN 459
+L +G KG YVL D Q +T + E+WH RL H N ++++ L K
Sbjct: 423 QLLTQGNKHKGLYVLKDVPFQTYYSTRQQ--SSDDEVWHQRLGHPNKEVLQHLIKTKAIV 480
Query: 460 VSSILPKPICCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIF 519
V+ C +CQM K RL + +S L+ +HCDLWGP+PV S GF Y+VIF
Sbjct: 481 VNKTSSN--MCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIF 538
Query: 520 VDDFSQFTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSS 579
+D++S+FTWFYPLK KSDF+ V V F+ VENQ+ + +FQ D G EF + K A +S
Sbjct: 539 IDNYSRFTWFYPLKLKSDFFSVFVLFQQLVENQYQHKIAMFQCDGGGEFVSYKFVAHLAS 598
Query: 580 SGVLHRFLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPS 639
G+ CPHT QNG ER+HR++ ELGL++++HS V WV AF T+ ++ N +PS
Sbjct: 599 CGIKQLISCPHTPQQNGIAERRHRYLTELGLSLMFHSKVPHKLWVEAFFTSNFLSNLLPS 658
Query: 640 KVLSD-QIPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKG 698
LSD + P+++L P Y FG +P LRPY KNKF P+ C+FLGYN+ +KG
Sbjct: 659 STLSDNKSPYEMLHGTPPVYTALRVFGSACYPYLRPYAKNKFDPKSLLCVFLGYNNKYKG 718
Query: 699 FKCFDPTTSRTYVSRHAQFDEFCFPLTGSKSSPNDL---VVFTFYEPAAGS------PPS 749
++C P T + Y+ RH FDE FP + S + +FT ++ S PS
Sbjct: 719 YRCLHPPTGKVYICRHVLFDERKFPYSDIYSQFQTISGSPLFTAWQKGFSSTALSRETPS 778
Query: 750 LQPVILVVP----ESSPPTGPLP--CPSCVDPDVQPVPVDD--APPSPVPHNDAPPLP-- 799
++ P SS PTG P + PDV D PPSP+ P P
Sbjct: 779 TNVEDIIFPSATVSSSVPTGCAPNIAETATAPDVDVAAAHDMVVPPSPITSTSLPTQPEE 838
Query: 800 -----------APTSPTPPATP--LVVTQAPPTSPPTTPPAVTQVPLAPVDARPR-TRS* 845
+ T+ + TP + V+ + P ++ AP + P TR+
Sbjct: 839 STSDQNHYSTDSETAISSAMTPQSINVSLFEDSDFPPLQSVISSTTAAPETSHPMITRAK 898
Query: 846 NGIFKPNPRYALVHAQPTGLLTALHTVT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWT 905
+GI KPNP+YA L + PK K A+K W AM +E+ +H+ TW
Sbjct: 899 SGITKPNPKYA--------LFSVKSNYPEPKSVKEALKDEGWTNAMGEEMGTMHETDTWD 950
Query: 906 LVPRPYTTNVVGSK*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTV 965
LVP ++G K VF+TK +SDG+++RLK LVA+G Q G DY T+SPVV++ TV
Sbjct: 951 LVPPEMVDRLLGCKWVFKTKLNSDGSLDRLKARLVARGYEQEEGVDYVETYSPVVRSATV 1010
Query: 966 RLILSLVVLND*QLHQLDVKNAFLHGHLTETVYMEQPHGFVD------------LVSRLM 1013
R IL + +N L QLDVKNAFLH L ETV+M QP GF D + L
Sbjct: 1011 RSILHVATINKWSLKQLDVKNAFLHDELKETVFMTQPPGFEDPSRPDYVCKLKKAIYDLK 1070
Query: 1014 CVG*TRLSTASNRRLVLGFSA*ALFSCVLVFRVVGLIHPCSFFY-KGHITLYLLVYVDDI 1072
S+ L GF + P F Y KG ++LL+YVDD+
Sbjct: 1071 QAPRAWFDKFSSYLLKYGF-------------ICSFSDPSLFVYLKGRDVMFLLLYVDDM 1117
Query: 1073 ILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLEITYTADGLFLGHAKYAHDLLSHAL 1132
ILTG++ LL + L+ EF +K +G L YFLG++ Y DGLFL KY DLL +A
Sbjct: 1118 ILTGNNDVLLQQLLNILSTEFRMKDMGALHYFLGIQAHYHNDGLFLSQEKYTSDLLVNAG 1177
Query: 1133 MLEASHVLTPLAAGSHLVSSGEGYSDPTHYRSLVGALQYLTITRPDLSYAVNTVSQFLQT 1192
M + S + TPL L + + + +PT++R L G LQYLT+TRPD+ +AVN V Q +
Sbjct: 1178 MSDCSSMPTPLQL-DLLQGNNKPFPEPTYFRRLAGKLQYLTLTRPDIQFAVNFVCQKMHA 1236
Query: 1193 PTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAVLGYSDADWARCTDHRRSTYGYAIFLG 1252
PT+ F +KRI+ Y+ G+ + + YSD+DWA C D RRST G+ FLG
Sbjct: 1237 PTMSDFHLLKRILHYLKGTMTMGINLSSNTDSVLRCYSDSDWAGCKDTRRSTGGFCTFLG 1296
Query: 1253 YNLLSWSAKKQPSVAHSSCESEYRAMANTASELVWLLNLLHELRVRLSAPPLFLSDNQSA 1312
YN++SWSAK+ P+V+ SS E+EYR ++ ASE+ W+ LL E+ + P DN SA
Sbjct: 1297 YNIISWSAKRHPTVSKSSTEAEYRTLSFAASEVSWIGFLLQEIGLPQQQIPEMYCDNLSA 1356
Query: 1313 LFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVRHVPTSLQLADIFTKVLPRPLFDLFR 1372
++++ NP H +KH +D ++VRE V+ G L V+H+P S QLADIFTK LP+ F R
Sbjct: 1357 VYLSANPALHSRSKHFQVDYYYVRERVALGALTVKHIPASQQLADIFTKSLPQAPFCDLR 1416
Query: 1373 SKLRVGL 1379
KL V L
Sbjct: 1417 FKLGVVL 1423
>At4g02960 putative polyprotein of LTR transposon
Length = 1456
Score = 769 bits (1985), Expect = 0.0
Identities = 520/1476 (35%), Positives = 743/1476 (50%), Gaps = 175/1476 (11%)
Query: 20 KLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFVQW 79
KL S N+L+WS+QV A+ L +D P ++ VP NP + +W
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTP-------MPPATIGTDAVPRVNPDYTRW 77
Query: 80 QARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLR-----DEL 134
+ +D+ + S +L +++ ATTA +W L YA+ + +LR D+L
Sbjct: 78 RRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQL 137
Query: 135 QLMRRGSLSVSEYGRKIR*SVANDDKVHWFLRGLGPSYANFSTGQLDQVPL----PLFTD 190
L+ + + +D++V L L Y +DQ+ P T+
Sbjct: 138 ALLGK--------------PMDHDEQVERVLENLPDDYKPV----IDQIAAKDTPPSLTE 179
Query: 191 I---LWKVESHAIFQASLEDYVTPPSAAFHARNPTRSSGSQSSGGGHRG-----NSSSGS 242
I L ES + S E V P +A T ++ +Q++ G +R N S+
Sbjct: 180 IHERLINRESKLLALNSAE--VVPITANVVTHRNTNTNRNQNNRGDNRNYNNNNNRSNSW 237
Query: 243 RPRRDNGGSHCRGS--YTPRCQLCRKQGHYAAKCPV--RWDRPSESANLTHSFA-----A 293
+P S R Y RCQ+C QGH A +CP ++ + T F A
Sbjct: 238 QPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRA 297
Query: 294 GCSLNNS-NRSDKYMDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSRS- 351
++N+ N ++ +D+GAT H+T + L++ Y+G D V++ +G+ + ITH GS S
Sbjct: 298 NLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASL 357
Query: 352 --ASHSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPCD 409
+S S+ L+ VL VP + NL+SV +L + V F SF +++ TG L +G
Sbjct: 358 PTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTK 417
Query: 410 KGFYVLD-QGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKL---HKLGCFNVSSILP 465
Y SQA+ +S +A+ WHSRL H + I+ + H L N S
Sbjct: 418 DELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSH--- 474
Query: 466 KPICCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQ 525
K + C+ C + KS ++ ++ +S L+ ++ D+W SP+ S+D + Y+VIFVD F++
Sbjct: 475 KLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTR 533
Query: 526 FTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHR 585
+TW YPLK+KS D + FK+ VEN+F + SDNG EF ++ S G+ H
Sbjct: 534 YTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHF 591
Query: 586 FLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQ 645
PHT NG ERKHRH++E+GL +L H+ V +YW +AFS AVY+INR+P+ +L Q
Sbjct: 592 TSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQ 651
Query: 646 IPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPT 705
PFQ LF P Y FGC +P LRPY ++K + C F+GY+ + C
Sbjct: 652 SPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIP 711
Query: 706 TSRTYVSRHAQFDEFCFPLTG------------SKSSPN-----DLVVFTFYEPAAGSPP 748
T R Y SRH QFDE CFP + S S+PN L PA PP
Sbjct: 712 TGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPA---PP 768
Query: 749 SLQPVI---------------------------LVVPESSPPTGPL---PCPSCVDPDVQ 778
L P + + P SS PT P P P+ Q
Sbjct: 769 CLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQ 828
Query: 779 -----------PVPVDDAPPSPVPHNDAP--PLPAPTSPTP------PATPLVVTQAPPT 819
P P +P SP ++ P P+ +P PTP P +P + + P
Sbjct: 829 NSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPP 888
Query: 820 SPPTTP-PAVTQVPL-APVDARPR-TRS*NGIFKPNPRYALVHAQPTGLLTALHTVT*PK 876
PP P P + QV APV+ TR+ +GI KPN +Y+ T+L + P+
Sbjct: 889 LPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYA--------TSLAANSEPR 940
Query: 877 GFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPY-TTNVVGSK*VFRTKFHSDGTVERL 935
AMK W AM E++A TW LVP P + +VG + +F KF+SDG++ R
Sbjct: 941 TAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRY 1000
Query: 936 KTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLTE 995
K LVA+G Q PG DY+ TFSPV+K+T++R++L + V + QLDV NAFL G LT+
Sbjct: 1001 KARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTD 1060
Query: 996 TVYMEQPHGFVD-----LVSRLMCVG*TRLSTASNRRLVLGFSA*A------LFSCVLVF 1044
VYM QP GFVD V RL R+ + G L + +L
Sbjct: 1061 EVYMSQPPGFVDKDRPDYVCRL-------------RKAIYGLKQAPRAWYVELRTYLLTV 1107
Query: 1045 RVVGLIHPCSFFY--KGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLG 1102
V I S F +G +Y+LVYVDDI++TG+D LL + L+ F++K L
Sbjct: 1108 GFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLH 1167
Query: 1103 YFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHL-VSSGEGYSDPTH 1161
YFLG+E GL L +Y DLL+ ML A V TP+A L + SG DPT
Sbjct: 1168 YFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE 1227
Query: 1162 YRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRT 1221
YR +VG+LQYL TRPDLSYAVN +SQ++ PT DH+ A+KR++RY+ G+ ++
Sbjct: 1228 YRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKG 1287
Query: 1222 SSPAVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANT 1281
++ ++ YSDADWA TD ST GY ++LG++ +SWS+KKQ V SS E+EYR++ANT
Sbjct: 1288 NTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANT 1347
Query: 1282 ASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSS 1341
+SEL W+ +LL EL ++LS PP+ DN A ++ NPV H KHI LD HF+R V S
Sbjct: 1348 SSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQS 1407
Query: 1342 GRLAVRHVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
G L V HV T QLAD TK L R F F K+ V
Sbjct: 1408 GALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443
>At4g28900 putative protein
Length = 1415
Score = 760 bits (1962), Expect = 0.0
Identities = 500/1420 (35%), Positives = 716/1420 (50%), Gaps = 154/1420 (10%)
Query: 10 AYTWVHMITVKLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVV 69
A + H +T+KL++ N+LLW Q L NQ L V A P + + + V
Sbjct: 10 ALCFSHYVTLKLSTANYLLWKIQFETWLNNQRLLGFVTG--ANPCPNATRSIRNG-DQVT 66
Query: 70 PAPNPLFVQWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMR 129
A NP F+ W D+ + LL SL+E+AL T+R+VW +L Y + +R+
Sbjct: 67 EATNPDFLTWVQNDQKIMGWLLGSLSEDALRSVYGLHTSREVWFSLAKKYNRVSASRKSD 126
Query: 130 LRDELQLMRRGSLSVSEYGRKIR*----------SVANDDKVHWFLRGLGPSYANFST-- 177
L+ L + + S+ EY ++ V ++K+ L GLG Y ST
Sbjct: 127 LQRRLNPVSKNEKSMLEYLNCVKQICDQLDSIGCPVPENEKIFGVLNGLGQEYMLVSTMI 186
Query: 178 -GQLDQVPLPLFTDILWKVESHAIFQASLEDYVTPPSAAFHARNPTRSSGSQSSGGGHRG 236
G +D P+ F D+++K+ + F L++ QS G R
Sbjct: 187 KGSMDTYPMS-FEDVVFKLIN---FDDKLQN-------------------GQSGGNRGRN 223
Query: 237 NSSSGSR--PRRDNGGSHCRGSYTPRCQLCRKQGHYAAKCPVRWDRPSESANLTHSFAAG 294
N ++ R P++ + GS P CQ+C K GH A KC R+D +S + + +FAA
Sbjct: 224 NYTTKGRGFPQQISSGSPSDSGTRPTCQICNKYGHSAYKCWKRFDHAFQSEDFSKAFAA- 282
Query: 295 CSLNNSNRSDKYMDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSR---S 351
+++ + D+GATSH+T+S SQL + YSG D V+VGN L ITHIGS S
Sbjct: 283 MRVSDQKSNPWVTDSGATSHITNSTSQLQSAQPYSGEDSVIVGNSDFLPITHIGSAVLTS 342
Query: 352 ASHSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPCDKG 411
++PL +VLV P +T +L+SVSKLT D+ F++D +++++ T +L KG
Sbjct: 343 NQGNLPLRDVLVCPNITKSLLSVSKLTSDYPCVIEFDSDGVIVKDKLTKQLLTKGTRHND 402
Query: 412 FYVLDQGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSSILPKPICCT 471
Y+L+ + + SS S E+WH RL H N D++++L + +S C
Sbjct: 403 LYLLEN-PKFMACYSSRQQATSDEVWHMRLGHPNQDVLQQLLRNKAIVISKTSHS--LCD 459
Query: 472 SCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYP 531
+CQM K +L + +S +L+ VHCDLWGP+PV S GF Y+VIF+D++S+FTWFYP
Sbjct: 460 ACQMGKICKLPFASSDFVSSRLLERVHCDLWGPAPVVSSQGFRYYVIFIDNYSRFTWFYP 519
Query: 532 LKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHT 591
L+ KSDF+ V + F+ VENQ + + FQ D G EF +N+ + + G+ CP+T
Sbjct: 520 LRLKSDFFSVFLTFQKMVENQCQQKIASFQCDGGGEFISNQFVSHLAECGIRQLISCPYT 579
Query: 592 QAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQ-IPFQL 650
QNG ERKHRH+ ELG +M++ V WV AF T+ ++ N +PS VL DQ P+++
Sbjct: 580 PQQNGIAERKHRHITELGSSMMFQGKVPQFLWVEAFYTSNFLCNLLPSSVLKDQKSPYEV 639
Query: 651 LFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTY 710
L AP Y + FGC +P LRPY NKF P+ C+F GYN +KG+KCF P T + Y
Sbjct: 640 LMGKAPVYTSLRVFGCACYPNLRPYASNKFDPKSLLCVFTGYNEKYKGYKCFHPPTGKIY 699
Query: 711 VSRHAQFDE----FCFPLTGSKSSPNDLVVFTFYEPAAGSPPSLQPVILVVP-------- 758
++RH FDE F + S N +V + P +L +
Sbjct: 700 INRHVLFDESKFLFSDIYSDKVSGTNSTLVSAWQSNFLPKSIPATPEVLDISNTAASFSD 759
Query: 759 ---ESSPPTGPLPCPSCVDPDVQPVPVDDAPPSPVPHNDAPPLPAPTSPTPPATPLVVTQ 815
E S G C D D P+ + P SPV ++P P S ++
Sbjct: 760 EQGEFSGAVGGGGCGCTADLDSVPIG-NSLPSSPVTQQNSPQPETPISSAGSGNDAEDSE 818
Query: 816 APPTSPPTT----PPAVTQVPLAP---VDARPR-TRS*NGIFKPNPRYALVHAQPTGLLT 867
S + A T+ A + P TRS +GIFKPNP+YA + T
Sbjct: 819 LSENSENSESSVFSEATTETEAADNTNDQSHPMITRSKSGIFKPNPKYA--------MFT 870
Query: 868 ALHTVT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFH 927
PK K+A+K P W AM +E + + TW LVP +G + VF+TK
Sbjct: 871 VKSNYPVPKTVKTALKDPGWTDAMGEEYDSFEETHTWDLVPPDSFITPLGCRWVFKTKLK 930
Query: 928 SDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNA 987
+DGT++RLK LVA+G Q G DY T+SPVV+ TVR IL + +N ++ QLDVKNA
Sbjct: 931 ADGTLDRLKARLVAKGYEQEEGVDYMETYSPVVRTATVRTILHVATINKWEIKQLDVKNA 990
Query: 988 FLHGHLTETVYMEQPHGF-----VDLVSRLMCVG*TRLSTASNRRLVLGFSA*ALFSCVL 1042
FLHG L ETVYM QP GF D V +L + + F + F
Sbjct: 991 FLHGDLKETVYMYQPPGFENQDRPDYVCKL-----NKAIYGLKQAPRAWFDKFSTFLLEF 1045
Query: 1043 VFRVVGLIHPCSF-FYKGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKL 1101
F + P F F KG ++LL+Y+DD++LTG+
Sbjct: 1046 GF-ICTYSDPSLFVFLKGRDLMFLLLYMDDMLLTGN------------------------ 1080
Query: 1102 GYFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHLV-SSGEGYSDPT 1160
+ KYA DLL A M + + + TPL V E ++DPT
Sbjct: 1081 ------------------NKKYAMDLLVAAGMADCAPMPTPLPLQLDKVPGQQESFADPT 1122
Query: 1161 HYRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRR 1220
++RSL AVN V Q + +PTV F +KR++RY+ GL
Sbjct: 1123 YFRSL----------------AVNLVCQKMHSPTVADFNLLKRVLRYLKGKVQMGLNLHN 1166
Query: 1221 TSSPAVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMAN 1280
+ + YSD+DWA C + RRS G+ FLG N++SWSAK+ P+V+ SS E+EYR ++
Sbjct: 1167 NTDITLRAYSDSDWANCKETRRSVGGFCTFLGTNIISWSAKRHPTVSRSSTEAEYRTLSI 1226
Query: 1281 TASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVS 1340
A+E+ W+ +LL E+ + APP DN SA+++ NP H +K D+D H+VRE V+
Sbjct: 1227 AATEVKWISSLLREIGIYQPAPPELYCDNLSAVYLTANPAMHNRSKAFDVDFHYVRERVA 1286
Query: 1341 SGRLAVRHVPTSLQLADIFTKVLP-RPLFDLFRSKLRVGL 1379
G L V+HVP S QLADIFTK LP RP FDL R KL V L
Sbjct: 1287 LGALVVKHVPASHQLADIFTKSLPQRPFFDL-RYKLGVVL 1325
>At1g44510 polyprotein, putative
Length = 1459
Score = 758 bits (1956), Expect = 0.0
Identities = 508/1459 (34%), Positives = 730/1459 (49%), Gaps = 138/1459 (9%)
Query: 20 KLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFVQW 79
KL S N+L+WS Q+ A+L +L +D V P P ++ ++ VV A NP F W
Sbjct: 32 KLTSTNYLMWSIQIHALLDGYDLAGYLDNSVVIP------PETTTINSVVSA-NPSFTLW 84
Query: 80 QARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQLMRR 139
+ +D+ + S L+ +++ S AT + +W+ L++ YA + +LR ++Q + +
Sbjct: 85 KRQDKLIFSALIGAISPAVQSLVSRATNSSQIWSTLNNTYAKPSYGHIKQLRQQIQRLTK 144
Query: 140 GSLSVSEYGRK----------IR*SVANDDKVHWFLRGLGPSYANFSTGQLDQVPLPLFT 189
G+ ++ EY + + + ++++V L+GL Y + P T
Sbjct: 145 GTKTIDEYVQSHTTRLDQLAILGKPMEHEEQVEHILKGLPEEYKTVVDQIEGKDNTPTIT 204
Query: 190 DILWKVESHAIFQASLEDYVTPPSAAF-------HARNPTRSSGSQS-----SGGGHRGN 237
+I ++ +H ++ L PPS++F RN + G H N
Sbjct: 205 EIHERLINH---ESKLLSDEVPPSSSFPMSANAVQQRNFNNNCNQNQHKNRYQGNTHNNN 261
Query: 238 SSSGSRPRRDN-GGSHCRGSYTPRCQLCRKQGHYAAKCPVRWDRPSESANLTHSF----- 291
+++ S+P N G Y +CQ+C QGH A +CP +++ HS
Sbjct: 262 TNTNSQPSTYNKSGQRTFKPYLGKCQICSVQGHSARRCPQLQAMQLPASSSAHSPFTPWQ 321
Query: 292 -AAGCSLNNSNRSDKYM-DTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGS 349
A ++ + ++ ++ D+GAT H+T L+ L+ Y+G + V++ +G GL I GS
Sbjct: 322 PRANLAIGSPYAANPWLLDSGATHHITSDLNALSLHQPYNGGEYVMIADGTGLTIKQTGS 381
Query: 350 R---SASHSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKG 406
S + + L VL VP + NL+SV +L + V F SF +++ TG +L +G
Sbjct: 382 TFLPSQNRDLALHKVLYVPDIRKNLISVYRLCNTNQVSVEFFPASFQVKDLNTGTLLLQG 441
Query: 407 PCDKGFY---VLDQGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSSI 463
Y V + + AL + S P+ + WHSRL H + I+ L VS
Sbjct: 442 RTKDDLYEWPVTNPPATALFTSPS--PKTTLSSWHSRLGHPSASILNTLLSKFSLPVSVA 499
Query: 464 LPKPICCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDF 523
C+ C + KS +L + +S+ L+ + D+W SP+ S D + Y+++ VD +
Sbjct: 500 SSNKTSCSDCLINKSHKLPFATSSIHSSSPLEYIFTDVW-TSPIISHDNYKYYLVLVDHY 558
Query: 524 SQFTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVL 583
+++TW YPL++KS + FKA VEN+F ++ SDNG EF ++ S+G+
Sbjct: 559 TRYTWLYPLQQKSQVKATFIAFKALVENRFQAKIRTLYSDNGGEFI--ALRDFLVSNGIS 616
Query: 584 HRFLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLS 643
H PHT NG ERKHRH++E GL +L + V YW +AF+TAVY+INR+P+ VL
Sbjct: 617 HLTSPPHTPEHNGLSERKHRHIVETGLTLLTQASVPREYWTYAFATAVYLINRMPTPVLC 676
Query: 644 DQIPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFD 703
Q PFQ LF +P Y FGC FP LRPY +NK R C+FLGY+ + C D
Sbjct: 677 LQSPFQKLFGSSPNYQRLRVFGCLCFPWLRPYTRNKLEERSKRCVFLGYSLTQTAYLCLD 736
Query: 704 PTTSRTYVSRHAQFDEFCFPLTGSKSSPNDLVVFTFYEPAAGSPPS-----LQPVILVVP 758
+R Y SRH FDE +P S + + T E ++ S P+ + L P
Sbjct: 737 VDNNRLYTSRHVMFDESTYPFAASIREQSQSSLVTPPESSSSSSPANSGFPCSVLRLQSP 796
Query: 759 ESSPPTGPLPCPSCVDPDVQPVPVDDAPPS---------------------PVPHNDAP- 796
+S P P P D V P PS PH + P
Sbjct: 797 PASSPETPSPPQQQNDSPVSPRQTGSPTPSHHSQVRDSTLSPSPSVSNSEPTAPHENGPE 856
Query: 797 -------------PLPAPTSPTPPATPLVVTQAPPTSPPTTPPAVTQVPLAPV------- 836
PLP P T P++ + Q P TT Q +A
Sbjct: 857 PEAQSNPNSPFIGPLPNPNPETNPSSS--IEQRPVDKSTTTALPPNQTTIAATSNSRSQP 914
Query: 837 ---DARPRTRS*NGIFKPNPRYALVHAQPTGLLTALHTVT*PKGFKSAMKHPHWLPAMED 893
+ + +TRS N I KP + +L A L+ +TVT A+K W AM D
Sbjct: 915 PKNNHQMKTRSKNNITKPKTKTSLTVALTQPHLSEPNTVT------QALKDKKWRFAMSD 968
Query: 894 ELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYS 953
E A + TW LVP T ++VG + VF+ K+ +G +++ K LVA+G Q G DY+
Sbjct: 969 EFDAQQRNHTWDLVPPNPTQHLVGCRWVFKLKYLPNGLIDKYKARLVAKGFNQQYGVDYA 1028
Query: 954 LTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLTETVYMEQPHGFVDL----- 1008
TFSPV+KATT+R++L + V + L QLDV NAFL G LTE VYM QP GFVD
Sbjct: 1029 ETFSPVIKATTIRVVLDVAVKKNWPLKQLDVNNAFLQGTLTEEVYMAQPPGFVDKDRPSH 1088
Query: 1009 VSRLMCVG*TRLSTASNRRLVLGFSA------*ALFSCVLVFRVVGLIHPCSFFYKGHIT 1062
V RL R+ + G L +L V + S F H T
Sbjct: 1089 VCRL-------------RKAIYGLKQAPRAWYMELKQHLLNIGFVNSLADTSLFIYSHGT 1135
Query: 1063 --LYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLEITYTADGLFLGH 1120
LYLLVYVDDII+TGSD ++ ++ L + F+IK L YFLG+E T T GL L
Sbjct: 1136 TLLYLLVYVDDIIVTGSDHKSVSAVLSSLAERFSIKDPTDLHYFLGIEATRTNTGLHLMQ 1195
Query: 1121 AKYAHDLLSHALMLEASHVLTPLAAGSHL-VSSGEGYSDPTHYRSLVGALQYLTITRPDL 1179
KY DLL+ ML+A V TPL L + G +D + YRS+VG+LQYL TRPD+
Sbjct: 1196 RKYMTDLLAKHNMLDAKPVATPLPTSPKLTLHGGTKLNDASEYRSVVGSLQYLAFTRPDI 1255
Query: 1180 SYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAVL-GYSDADWARCT 1238
++AVN +SQF+ PT DH+QA KR++RY+ G+ F +SSP L +SDADWA +
Sbjct: 1256 AFAVNRLSQFMHQPTSDHWQAAKRVLRYLAGTTTHGI-FLNSSSPIHLHAFSDADWAGDS 1314
Query: 1239 DHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELVWLLNLLHELRVR 1298
ST Y I+LG N +SWS+KKQ V+ SS ESEYRA+AN ASE+ WL +LL EL +R
Sbjct: 1315 ADYVSTNAYVIYLGRNPISWSSKKQRGVSRSSTESEYRAVANAASEIRWLCSLLTELHIR 1374
Query: 1299 LSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVRHVPTSLQLADI 1358
L P DN A ++ NPV H KHI LD HFVR ++ S L V HV T+ QLAD
Sbjct: 1375 LPHGPTIFCDNIGATYICANPVFHSRMKHIALDYHFVRGMIQSRALRVSHVSTNDQLADA 1434
Query: 1359 FTKVLPRPLFDLFRSKLRV 1377
TK L RP F RSK+ V
Sbjct: 1435 LTKSLSRPHFLSARSKIGV 1453
>At1g59265 polyprotein, putative
Length = 1466
Score = 745 bits (1923), Expect = 0.0
Identities = 483/1470 (32%), Positives = 734/1470 (49%), Gaps = 146/1470 (9%)
Query: 20 KLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFVQW 79
KL S N+L+WS+QV A+ L +D P ++ P NP + +W
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTT-------MPPATIGTDAAPRVNPDYTRW 77
Query: 80 QARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQLMRR 139
+ +D+ + S +L +++ ATTA +W L YA+ + +LR +L+ +
Sbjct: 78 KRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTK 137
Query: 140 GSLSVSEYGRKI----------R*SVANDDKVHWFLRGLGPSYANFSTGQLDQVPL---- 185
G+ ++ +Y + + + +D++V L L Y +DQ+
Sbjct: 138 GTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPV----IDQIAAKDTP 193
Query: 186 PLFTDILWKVESHA--IFQASLEDYVTPPSAAFHARNPTRSSGSQSSGGGHR---GNSSS 240
P T+I ++ +H I S + + A RN T ++ + + +R N+++
Sbjct: 194 PTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNN 253
Query: 241 GSRPRRDNG-----GSHCRGSYTPRCQLCRKQGHYAAKCP--------VRWDRPSESANL 287
S+P + + ++ Y +CQ+C QGH A +C V +P S
Sbjct: 254 NSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPP-SPFT 312
Query: 288 THSFAAGCSLNNSNRSDKYM-DTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITH 346
A +L + S+ ++ D+GAT H+T + L+ Y+G D V+V +G+ + I+H
Sbjct: 313 PWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISH 372
Query: 347 IGSRSAS---HSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVL 403
GS S S + L N+L VP + NL+SV +L + V F SF +++ TG L
Sbjct: 373 TGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPL 432
Query: 404 GKGPCDKGFYVLD-QGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSS 462
+G Y SQ + +S +A+ WH+RL H I+ + +V +
Sbjct: 433 LQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLN 492
Query: 463 ILPKPICCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDD 522
K + C+ C + KS ++ + ++ L+ ++ D+W SP+ S D + Y+VIFVD
Sbjct: 493 PSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDH 551
Query: 523 FSQFTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGV 582
F+++TW YPLK+KS + + FK +EN+F + F SDNG EF + FS G+
Sbjct: 552 FTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGI 609
Query: 583 LHRFLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVL 642
H PHT NG ERKHRH++E GL +L H+ + +YW +AF+ AVY+INR+P+ +L
Sbjct: 610 SHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLL 669
Query: 643 SDQIPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCF 702
+ PFQ LF +P Y FGC +P LRPY ++K + C+FLGY+ + C
Sbjct: 670 QLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCL 729
Query: 703 DPTTSRTYVSRHAQFDEFCFPLTGSKSSPNDLVVFTFYEPAAGSPPSLQPVILVVPESSP 762
TSR Y+SRH +FDE CFP + ++ + + SP + P
Sbjct: 730 HLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPT--------- 780
Query: 763 PTGPLPCPSCVDPDVQPVP-----------------VDDAPPSPVPHNDAPPLPAPTSPT 805
T LP PSC DP P +D + S P + P P P
Sbjct: 781 RTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQ 840
Query: 806 PP-----------------------------------------ATPLVVTQAPPTSPPTT 824
P ++P T A +S T
Sbjct: 841 PTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPT 900
Query: 825 PPAVTQVP------------LAPVDARPR-TRS*NGIFKPNPRYALVHAQPTGLLTALHT 871
PP++ P AP++ TR+ GI KPNP+Y+L +L
Sbjct: 901 PPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLA--------VSLAA 952
Query: 872 VT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYT-TNVVGSK*VFRTKFHSDG 930
+ P+ A+K W AM E++A TW LVP P + +VG + +F K++SDG
Sbjct: 953 ESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG 1012
Query: 931 TVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLH 990
++ R K LVA+G Q PG DY+ TFSPV+K+T++R++L + V + QLDV NAFL
Sbjct: 1013 SLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQ 1072
Query: 991 GHLTETVYMEQPHGFVDLVSRLMCVG*TRLSTASNRRLVLGFSA*ALFSCVLVFRVVGLI 1050
G LT+ VYM QP GF+D R V R + ++ + L + +L V +
Sbjct: 1073 GTLTDDVYMSQPPGFIDK-DRPNYVCKLRKALYGLKQAPRAWYV-ELRNYLLTIGFVNSV 1130
Query: 1051 HPCSFFY--KGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLE 1108
S F +G +Y+LVYVDDI++TG+DP+LL + L+ F++K +L YFLG+E
Sbjct: 1131 SDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE 1190
Query: 1109 ITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHL-VSSGEGYSDPTHYRSLVG 1167
GL L +Y DLL+ M+ A V TP+A L + SG +DPT YR +VG
Sbjct: 1191 AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVG 1250
Query: 1168 ALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAVL 1227
+LQYL TRPD+SYAVN +SQF+ PT +H QA+KRI+RY+ + G+ ++ ++ ++
Sbjct: 1251 SLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLH 1310
Query: 1228 GYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELVW 1287
YSDADWA D ST GY ++LG++ +SWS+KKQ V SS E+EYR++ANT+SE+ W
Sbjct: 1311 AYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQW 1370
Query: 1288 LLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVR 1347
+ +LL EL +RL+ PP+ DN A ++ NPV H KHI +D HF+R V SG L V
Sbjct: 1371 ICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVV 1430
Query: 1348 HVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
HV T QLAD TK L R F F SK+ V
Sbjct: 1431 HVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460
>At1g58889 polyprotein, putative
Length = 1466
Score = 743 bits (1919), Expect = 0.0
Identities = 482/1470 (32%), Positives = 733/1470 (49%), Gaps = 146/1470 (9%)
Query: 20 KLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFVQW 79
KL S N+L+WS+QV A+ L +D P ++ P NP + +W
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTT-------MPPATIGTDAAPRVNPDYTRW 77
Query: 80 QARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQLMRR 139
+ +D+ + S +L +++ ATTA +W L YA+ + +LR +L+ +
Sbjct: 78 KRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTK 137
Query: 140 GSLSVSEYGRKI----------R*SVANDDKVHWFLRGLGPSYANFSTGQLDQVPL---- 185
G+ ++ +Y + + + +D++V L L Y +DQ+
Sbjct: 138 GTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPV----IDQIAAKDTP 193
Query: 186 PLFTDILWKVESHA--IFQASLEDYVTPPSAAFHARNPTRSSGSQSSGGGHR---GNSSS 240
P T+I ++ +H I S + + A RN T ++ + + +R N+++
Sbjct: 194 PTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNN 253
Query: 241 GSRPRRDNG-----GSHCRGSYTPRCQLCRKQGHYAAKCP--------VRWDRPSESANL 287
S+P + + ++ Y +CQ+C QGH A +C V +P S
Sbjct: 254 NSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPP-SPFT 312
Query: 288 THSFAAGCSLNNSNRSDKYM-DTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITH 346
A +L + S+ ++ D+GAT H+T + L+ Y+G D V+V +G+ + I+H
Sbjct: 313 PWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISH 372
Query: 347 IGSRSAS---HSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVL 403
GS S S + L N+L VP + NL+SV +L + V F SF +++ TG L
Sbjct: 373 TGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPL 432
Query: 404 GKGPCDKGFYVLD-QGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSS 462
+G Y SQ + +S +A+ WH+RL H I+ + +V +
Sbjct: 433 LQGKTKDELYEWPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLN 492
Query: 463 ILPKPICCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDD 522
K + C+ C + KS ++ + ++ L+ ++ D+W SP+ S D + Y+VIFVD
Sbjct: 493 PSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDH 551
Query: 523 FSQFTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGV 582
F+++TW YPLK+KS + + FK +EN+F + F SDNG EF + FS G+
Sbjct: 552 FTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGI 609
Query: 583 LHRFLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVL 642
H PHT NG ERKHRH++E GL +L H+ + +YW +AF+ AVY+INR+P+ +L
Sbjct: 610 SHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLL 669
Query: 643 SDQIPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCF 702
+ PFQ LF +P Y FGC +P LRPY ++K + C+FLGY+ + C
Sbjct: 670 QLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCL 729
Query: 703 DPTTSRTYVSRHAQFDEFCFPLTGSKSSPNDLVVFTFYEPAAGSPPSLQPVILVVPESSP 762
TSR Y+SRH +FDE CFP + ++ + + SP + P
Sbjct: 730 HLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPT--------- 780
Query: 763 PTGPLPCPSCVDPDVQPVP-----------------VDDAPPSPVPHNDAPPLPAPTSPT 805
T LP PSC DP P +D + S P + P P P
Sbjct: 781 RTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQ 840
Query: 806 PP-----------------------------------------ATPLVVTQAPPTSPPTT 824
P ++P T A +S T
Sbjct: 841 PTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPT 900
Query: 825 PPAVTQVP------------LAPVDARPR-TRS*NGIFKPNPRYALVHAQPTGLLTALHT 871
PP++ P AP++ TR+ GI KPNP+Y+L +L
Sbjct: 901 PPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLA--------VSLAA 952
Query: 872 VT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYT-TNVVGSK*VFRTKFHSDG 930
+ P+ A+K W AM E++A TW LVP P + +VG + +F K++SDG
Sbjct: 953 ESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDG 1012
Query: 931 TVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLH 990
++ R K VA+G Q PG DY+ TFSPV+K+T++R++L + V + QLDV NAFL
Sbjct: 1013 SLNRYKARFVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQ 1072
Query: 991 GHLTETVYMEQPHGFVDLVSRLMCVG*TRLSTASNRRLVLGFSA*ALFSCVLVFRVVGLI 1050
G LT+ VYM QP GF+D R V R + ++ + L + +L V +
Sbjct: 1073 GTLTDDVYMSQPPGFIDK-DRPNYVCKLRKALYGLKQAPRAWYV-ELRNYLLTIGFVNSV 1130
Query: 1051 HPCSFFY--KGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLE 1108
S F +G +Y+LVYVDDI++TG+DP+LL + L+ F++K +L YFLG+E
Sbjct: 1131 SDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE 1190
Query: 1109 ITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHL-VSSGEGYSDPTHYRSLVG 1167
GL L +Y DLL+ M+ A V TP+A L + SG +DPT YR +VG
Sbjct: 1191 AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVG 1250
Query: 1168 ALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAVL 1227
+LQYL TRPD+SYAVN +SQF+ PT +H QA+KRI+RY+ + G+ ++ ++ ++
Sbjct: 1251 SLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLH 1310
Query: 1228 GYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELVW 1287
YSDADWA D ST GY ++LG++ +SWS+KKQ V SS E+EYR++ANT+SE+ W
Sbjct: 1311 AYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQW 1370
Query: 1288 LLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVR 1347
+ +LL EL +RL+ PP+ DN A ++ NPV H KHI +D HF+R V SG L V
Sbjct: 1371 ICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVV 1430
Query: 1348 HVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
HV T QLAD TK L R F F SK+ V
Sbjct: 1431 HVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460
>At4g16870 retrotransposon like protein
Length = 1474
Score = 736 bits (1900), Expect = 0.0
Identities = 501/1470 (34%), Positives = 717/1470 (48%), Gaps = 146/1470 (9%)
Query: 20 KLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFVQW 79
KL S N+L+WS Q+ A+L L +D + P+ + ++VV A NP + W
Sbjct: 33 KLTSNNYLMWSLQIHALLDGYELAGHLDGSIETPAPTL------TTNNVVSA-NPQYTLW 85
Query: 80 QARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQLMRR 139
+ +DR + S L+ +++ AT A +W L + YA + +LR +++ +++
Sbjct: 86 KRQDRLIFSALIGAISPPVQPLVSRATKASQIWKTLTNTYAKSSYDHIKQLRTQIKQLKK 145
Query: 140 GSLSVSEYGRK----------IR*SVANDDKVHWFLRGLGPSYANFSTGQLDQVPLPLFT 189
G+ ++ EY + + ++++V L GL Y + P T
Sbjct: 146 GTKTIDEYVLSHTTLLDQLAILGKPMEHEEQVERILEGLPEDYKTVVDQIEGKDNTPSIT 205
Query: 190 DILWKVESHA---IFQASLEDYVTPPSA-AFHARNPTRSSGSQSSGGGHRGNSSSGS-RP 244
+I ++ +H + A+L P SA R+ + + + +GN+ + + +P
Sbjct: 206 EIHERLINHEAKLLSTAALSSSSLPMSANVAQQRHHNNNRNNNQNKNRTQGNTYTNNWQP 265
Query: 245 RRDN-GGSHCRGSYTPRCQLCRKQGHYAAKCPVRWDRPSESANLTHSFAAGCSLNNSNRS 303
+N G Y +CQ+C QGH A +CP S++ +F N
Sbjct: 266 SANNKSGQRPFKPYLGKCQICNVQGHSARRCPQLQAMQPSSSSSASTFTPWQPRANLAMG 325
Query: 304 DKY------MDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSR---SASH 354
Y +D+GAT H+T L+ L Y+G+D V++ +G L IT GS S +
Sbjct: 326 APYTANNWLLDSGATHHITSDLNALALHQPYNGDD-VMIADGTSLKITKTGSTFLPSNAR 384
Query: 355 SVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPCDKGFY- 413
+ L+ VL VP + NLVSV +L + V F SF +++ TG +L +G Y
Sbjct: 385 DLTLNKVLYVPDIQKNLVSVYRLCNTNQVSVEFFPASFQVKDLNTGTLLLQGRTKDELYE 444
Query: 414 --VLDQGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSSILPKPICCT 471
V + + AL T S P+ + WHSRL H + I+ L VS + C+
Sbjct: 445 WPVTNPKATALFTTPS--PKTTLSSWHSRLGHPSSSILNTLISKFSLPVSVSASNKLACS 502
Query: 472 SCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYP 531
C + KS +L + ++++ L+ + D+W SP+ S D + Y+++ VD +++TW YP
Sbjct: 503 DCFINKSHKLPFSISSIKSTSPLEYIFSDVW-MSPILSPDNYKYYLVLVDHHTRYTWLYP 561
Query: 532 LKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHT 591
L++KS + FKA VEN+F ++ SDNG EF ++ S+G+ H PHT
Sbjct: 562 LQQKSQVKSTFIAFKALVENRFQAKIRTLYSDNGGEFI--ALREFLVSNGISHLTSPPHT 619
Query: 592 QAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLL 651
NG ERKHRH++E GL +L + V YW +AF+ AVY+INR+P+ VLS + PFQ L
Sbjct: 620 PEHNGLSERKHRHIVETGLTLLTQASVPREYWPYAFAAAVYLINRMPTPVLSMESPFQKL 679
Query: 652 FQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYV 711
F P Y FGC FP LRPY NK R C+FLGY+ + CFD R Y
Sbjct: 680 FGSKPNYERLRVFGCLCFPWLRPYTHNKLEERSRRCVFLGYSLTQTAYLCFDVEHKRLYT 739
Query: 712 SRHAQFDEFCFPLTGSKSSPNDLVVFTFYE-------PAAGS----PPSLQPVILVVPES 760
SRH FDE FP + + +S N L TF + P S P L V+ +
Sbjct: 740 SRHVVFDEASFPFS-NLTSQNSLPTVTFEQSSSPLVTPILSSSSVLPSCLSSPCTVLHQQ 798
Query: 761 SPPTGPLPCPSCVDPDVQPVPVD---------------------------DAPPS----- 788
PP P P P P+ ++ P+
Sbjct: 799 QPPVTTPNSPHSSQPTTSPAPLSPHRSTTMDFQVPQVRSSSPLLSSSSSLNSEPTAPNEN 858
Query: 789 -PVPHNDAPPL-------------PAPTSPTPPATPLVVTQAP------PTSPPTTPPAV 828
P P +PP+ P P P + T AP PT+ TTP
Sbjct: 859 GPEPEAQSPPIGPLSNPTHEAFIGPLPNPNRNPTNEIEPTPAPHPKPVKPTTTTTTPNRT 918
Query: 829 T-----QVPLAPVDAR--PRTRS*NGIFKPNPRYALVHAQPTGLLTALHTVT*PKGFKSA 881
T P AP + +TR+ N I KPN +++L P + + P A
Sbjct: 919 TVSDASHQPTAPQQNQHNMKTRAKNNIKKPNTKFSLTATLPN------RSPSEPTNVTQA 972
Query: 882 MKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGTVERLKTCLVA 941
+K W AM DE A + TW LVP + +VG K VF+ K+ +G +++ K LVA
Sbjct: 973 LKDKKWRFAMSDEFDAQQRNHTWDLVPHE-SQLLVGCKWVFKLKYLPNGAIDKYKARLVA 1031
Query: 942 QGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLTETVYMEQ 1001
+G Q G DY+ TFSPV+K+TT+RL+L + V D ++ QLDV NAFL G LTE VYM Q
Sbjct: 1032 KGFNQQYGVDYAETFSPVIKSTTIRLVLDVAVKKDWEIKQLDVNNAFLQGTLTEEVYMAQ 1091
Query: 1002 PHGFVDL-----VSRLMCVG*TRLSTASNRRLVLGFSA------*ALFSCVLVFRVVGLI 1050
P GF+D V RL R+ + G L + V +
Sbjct: 1092 PPGFIDKDRPTHVCRL-------------RKAIYGLKQAPRAWYMELKQHLFNIGFVNSL 1138
Query: 1051 HPCSFFYKGHIT--LYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLE 1108
S F H T +Y+LVYVDDII+TGSD S + + L + F+IK L YFLG+E
Sbjct: 1139 SDASLFIYCHGTTFVYVLVYVDDIIVTGSDKSSIDAVLTSLAERFSIKDPTDLHYFLGIE 1198
Query: 1109 ITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHL-VSSGEGYSDPTHYRSLVG 1167
T T GL L KY DLL+ M +A VLTPL L + G +D + YRS+VG
Sbjct: 1199 ATRTKQGLHLMQRKYIKDLLAKHNMADAKPVLTPLPTSPKLTLHGGTKLNDASEYRSVVG 1258
Query: 1168 ALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAVL 1227
+LQYL TRPD++YAVN +SQ + PT DH+QA KR++RY+ G+ TS +
Sbjct: 1259 SLQYLAFTRPDIAYAVNRLSQLMPQPTEDHWQAAKRVLRYLAGTSTHGIFLDTTSPLNLH 1318
Query: 1228 GYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELVW 1287
+SDADWA +D ST Y I+LG N +SWS+KKQ VA SS ESEYRA+AN ASE+ W
Sbjct: 1319 AFSDADWAGDSDDYVSTNAYVIYLGKNPISWSSKKQRGVARSSTESEYRAVANAASEVKW 1378
Query: 1288 LLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVR 1347
L +LL +L +RL P DN A ++ NPV H KHI +D HFVR ++ SG L V
Sbjct: 1379 LCSLLSKLHIRLPIRPSIFCDNIGATYLCANPVFHSRMKHIAIDYHFVRNMIQSGALRVS 1438
Query: 1348 HVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
HV T QLAD TK L R F R K+ V
Sbjct: 1439 HVSTRDQLADALTKPLSRAHFQSARFKIGV 1468
>At1g70010 hypothetical protein
Length = 1315
Score = 587 bits (1514), Expect = e-167
Identities = 428/1371 (31%), Positives = 633/1371 (45%), Gaps = 146/1371 (10%)
Query: 69 VPAPN---PLFVQWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKA 125
+P P+ P W+ + V S LL+S+++E + L TA +W L++ + +
Sbjct: 18 IPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTAAAIWKDLYTRFHKSSLP 77
Query: 126 REMRLRDELQLMRRGSLSVSEYGRKIR*S-------------------VANDDKVHWFLR 166
R +LR ++ +R+G+L +S Y + + ++V FL
Sbjct: 78 RLYKLRQQIHSLRQGNLDLSSYHTRTQTLWEELTSLQAVPRTVEDLLIERETNRVIDFLM 137
Query: 167 GLGPSYANFSTGQLDQVPLPLFTDILWKVESHAIFQASLEDYVTP--PSAAFHARNPTRS 224
GL Y + L + LP +++ ++ Q S TP S+ F P +
Sbjct: 138 GLNDCYDTVRSQILMKKTLPSLSEVFNMIDQDET-QRSARISTTPGMTSSVF----PVSN 192
Query: 225 SGSQSSGGGHRGNSSSGSRPRRDNGGSHCRGSYTPRCQLCRKQGHYAAKCPVRWDRPSES 284
SQS+ G P C C + GH C + P+
Sbjct: 193 QSSQSALNGDTYQKKE-----------------RPVCSYCSRPGHVEDTCYKKHGYPTSF 235
Query: 285 ANLTHSFAAGCSLNNSNRSDKYMDTGA--TSHMTHSLSQLTYSHAYSGNDRVLVGNGAGL 342
+ S N + S++ ++ + T +T S Q S S +
Sbjct: 236 KSKQKFVKPSISANAAIGSEEVVNNTSVSTGDLTTSQIQQLVSFLSSKLQPPSTPVQPEV 295
Query: 343 HITHIGSRSASHSVP--------------LSNVLVVPRLTNNLVSVSKLTRDHNVRAIFE 388
H + S +S S L++VL +P+ NL+SVS LT+ R F+
Sbjct: 296 HSISVSSDPSSSSTVCPISGSVHLGRHLILNDVLFIPQFKFNLLSVSSLTKSMGCRIWFD 355
Query: 389 ADSFVIQNRQTGAVLGKGPCDKGFYVLDQGSQALLATSSSLPRASF---ELWHSRLDHVN 445
S V+Q+ ++G G Y++D S + T SS+ AS +LWH RL H +
Sbjct: 356 ETSCVLQDATRELMVGMGKQVANLYIVDLDSLSHPGTDSSITVASVTSHDLWHKRLGHPS 415
Query: 446 FDIIKKLHKLGCFNVSSILPKP-------ICCTSCQMAKSKRLVCYDNHKRASAVLDLVH 498
++KL + SS+L P C C ++K K L ++ ++S DL+H
Sbjct: 416 ---VQKLQPM-----SSLLSFPKQKNNTDFHCRVCHISKQKHLPFVSHNNKSSRPFDLIH 467
Query: 499 CDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLK 558
D WGP V + DG+ YF+ VDD+S+ TW Y L+ KSD V+ F VENQF ++K
Sbjct: 468 IDTWGPFSVQTHDGYRYFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIK 527
Query: 559 VFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQNGRVERKHRHVLELGLAMLYHSHV 618
+SDN E + + S G++ CP T QN VERKH+H+L + ++ + SH+
Sbjct: 528 GVRSDNAPELNFTQ---FYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHI 584
Query: 619 STSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKN 678
SYW TAVY+INR+P+ +L D+ PF++L + PTY + FGC + P ++
Sbjct: 585 PISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRH 644
Query: 679 KFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHAQFDEFCFPLTGSKSSPNDLVVFT 738
KFSPR C F+GY S KG+K D T VSRH F E FP GS S + F
Sbjct: 645 KFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFF- 703
Query: 739 FYEPAAGSPPSLQPVILVVPESSPPTGPLPCPSCVDPDVQPVPVDDAPPSPVPHNDAPPL 798
P L P + +SS P S V+ PS P N+ P
Sbjct: 704 ---------PDLNPTPPMQRQSSDHVNPSDSSSSVE----------ILPSANPTNNVPEP 744
Query: 799 PAPTSPTPPATPLVVTQAPPTSPPTTPPAVTQVPLAPVDARPRTRS*NGIFKPNPRYALV 858
TS P + S ++ P + L+ Y +
Sbjct: 745 SVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRKFLS--------------------YDRI 784
Query: 859 HAQPTGLLTALHTVT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGS 918
+ L L P + A K W AM E L TW + P +G
Sbjct: 785 NDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVCSLPADKRCIGC 844
Query: 919 K*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*Q 978
+ +F+ K++SDG+VER K LVAQG TQ G DY+ TFSPV K +V+L+L +
Sbjct: 845 RWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKLLLGVAARFKLS 904
Query: 979 LHQLDVKNAFLHGHLTETVYMEQPHGFVD-----LVSRLMCVG*TRLSTA------SNRR 1027
L QLD+ NAFL+G L E +YM P G+ L +C RL + ++R+
Sbjct: 905 LTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVC----RLKKSLYGLKQASRQ 960
Query: 1028 LVLGFSA*ALFSCVLVFRVVGLIHPCSFFYKGHITLYLLVYVDDIILTGSDPSLLT*FIA 1087
L FS+ L L F H C I L +LVY+DDII+ ++ + + +
Sbjct: 961 WYLKFSSTLLG---LGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVDILKS 1017
Query: 1088 CLNDEFAIKYLGKLGYFLGLEITYTADGLFLGHAKYAHDLLSHALML---EASHVLTPLA 1144
+ F ++ LG+L YFLGLEI + G+ + KYA DLL L +S + P
Sbjct: 1018 QMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPMDPSM 1077
Query: 1145 AGSHLVSSGEGYSDPTHYRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRI 1204
+H SG + + YR L+G L YL ITRPD+++AVN ++QF P H QAV +I
Sbjct: 1078 VFAH--DSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVYKI 1135
Query: 1205 IRYVCAMQHFGLTFRRTSSPAVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQP 1264
++Y+ GL + TS + Y++AD+ C D RRST GY +FLG +L+ W ++KQ
Sbjct: 1136 LQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRKQD 1195
Query: 1265 SVAHSSCESEYRAMANTASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKH 1324
V+ SS E+EYR+++ ELVWL N L EL+V LS P L DN++A+ +A N V H+
Sbjct: 1196 VVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHER 1255
Query: 1325 AKHIDLDCHFVRELVSSGRLAVRHVPTSLQLADIFTKVLPRPLFDLFRSKL 1375
KHI+ DCH VRE + G + H+ T LQ+AD FTK L F SK+
Sbjct: 1256 TKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHFHRLISKM 1306
>At3g61330 copia-type polyprotein
Length = 1352
Score = 551 bits (1419), Expect = e-156
Identities = 418/1434 (29%), Positives = 668/1434 (46%), Gaps = 182/1434 (12%)
Query: 21 LNSGNFLLWSKQVTAILQNQNLFDIVDP-IVAPPSEFML-QPVSSALHHVVPAPNPLFVQ 78
L N+ WS ++ AIL ++++IV+ + P +E L Q L
Sbjct: 13 LTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDS---------- 62
Query: 79 WQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRD-----E 133
+ RD+ L+ L E+ + + AT+A++ W L ++Y ++ +++RL+ E
Sbjct: 63 -RKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFE 121
Query: 134 LQLMRRGSLSVSEYGRKIR*SVANDDK-----------VHWFLRGLGPSYANFSTGQLDQ 182
M+ G L VS+Y ++ +V N+ K + LR L + + T +
Sbjct: 122 ALQMKEGEL-VSDYFSRVL-TVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 183 VPLPLFT--DILWKVESHAIFQASLEDYVTPP-----SAAFHARNPTRSSGSQSSGGGHR 235
L T +L ++++ + ED + + ++ R G Q G G
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 236 G-NSSSGSRPRRDN------------GGSHCRGSY---TPRCQLCRKQGHYAAKCPVRWD 279
G + G RP DN G H + Y + +C C K GHYA++C +
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 280 RP-SESANLTHS--------FAAGCSLNNSNRSDK-YMDTGATSHMTHSLSQLT-YSHAY 328
+ E A+ A + + K Y+D+GA++HM S +
Sbjct: 300 KKFEEKAHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 329 SGNDRVLVGNGAGLHITHIGS-----RSASHSVPLSNVLVVPRLTNNLVSVSKLT-RDHN 382
GN V +G+ + + + G+ ++ H +SNV +P + N++S+ +L + ++
Sbjct: 360 RGN--VALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSMKTNILSLGQLLEKGYD 416
Query: 383 VRAIFEADSFVIQNRQTGAVLGKGPCDKG-FYVLDQGSQALLATSSSLPRASFELWHSRL 441
+R D+ + Q ++ K P K +VL+ + S+ LWH R
Sbjct: 417 IRL---KDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESW-LWHLRF 472
Query: 442 DHVNFDIIKKLHK------LGCFNVSSILPKPICCTSCQMAKS-KRLVCYDNHKRASAVL 494
H+NF ++ L + L C N + + C C + K K ++ RA L
Sbjct: 473 GHLNFGGLELLSRKEMVRGLPCINHPNQV-----CEGCLLGKQFKMSFPKESSSRAQKPL 527
Query: 495 DLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRKSDFYDVLVRFKAFVENQFS 554
+L+H D+ GP S+ +YF++F+DDFS+ TW Y LK KS+ +++ +FKA VE +
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESG 587
Query: 555 RSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQNGRVERKHRHVLELGLAMLY 614
+K +SD G EFT+ + +G+ + P + QNG VERK+R +LE+ +ML
Sbjct: 588 LVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLK 647
Query: 615 HSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVAPTYANFHPFGCRVFPCLRP 674
+ W A + AVY++NR P+K +S + P + P ++ FG +
Sbjct: 648 SKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPD 707
Query: 675 YMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHAQFDEFCFPLTGS---KSSP 731
++K + IF+GY+++ KG+K ++P T +T +SR+ F G S+
Sbjct: 708 EKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRN-----IVFDEEGEWDWNSNE 762
Query: 732 NDLVVFTFYEPAAGSPPSLQPVILVVPESSPPTGPLPCPSCVDPDVQPVPVDDAPPSPVP 791
D F +E P P
Sbjct: 763 EDYNFFPHFEE--------------------------------------------DEPEP 778
Query: 792 HNDAPPLPAPTSPTPPATPLVVTQAPPTSPPTTPPAVTQVPLAPVDARPRTRS*NGIFKP 851
+ PP PT+ PPTSP + +Q+ + + PR RS +
Sbjct: 779 TREEPPSEEPTT-------------PPTSPTS-----SQIEESSSERTPRFRSIQEL--- 817
Query: 852 NPRYALVHAQPTGLLTALHTVT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPY 911
Y + Q L L P F+ A++ W AM++E+ ++ K TW L P
Sbjct: 818 ---YEVTENQENLTLFCLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPN 874
Query: 912 TTNVVGSK*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSL 971
+G K V++ K +S G VER K LVA+G +Q G DY F+PV + TVRLI+SL
Sbjct: 875 GHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISL 934
Query: 972 VVLND*QLHQLDVKNAFLHGHLTETVYMEQPHGFV-----DLVSRLMCV--G*TRLSTAS 1024
N ++HQ+DVK+AFL+G L E VY+EQP G++ D V RL V G + A
Sbjct: 935 AAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAW 994
Query: 1025 NRRLVLGFSA*ALFSCVLVFRVVGLIHPCSFFYKGHITLYLLVYVDDIILTGSDPSLLT* 1084
N R+ F C H + L +YVDD+I TG++PS+
Sbjct: 995 NTRIDKYFKEKDFIKCPYE-------HALYIKIQKEDILIACLYVDDLIFTGNNPSIFEE 1047
Query: 1085 FIACLNDEFAIKYLGKLGYFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLA 1144
F + EF + +G + Y+LG+E+ +G+F+ YA ++L + +++ V TP+
Sbjct: 1048 FKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPME 1107
Query: 1145 AGSHLVSSGEGYS-DPTHYRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKR 1203
G L EG DPT ++SLVG+L+YLT TRPD+ YAV VS++++ PT HF+A KR
Sbjct: 1108 CGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKR 1167
Query: 1204 IIRYVCAMQHFGLTFRRTSSPAVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQ 1263
I+RY+ +FGL + TS ++GYSD+DW D R+ST G+ ++G +W +KKQ
Sbjct: 1168 ILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQ 1227
Query: 1264 PSVAHSSCESEYRAMANTASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHK 1323
P V S+CE+EY A + +WL NLL EL + P DN+SA+ +A+NPV H
Sbjct: 1228 PIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHD 1287
Query: 1324 HAKHIDLDCHFVRELVSSGRLAVRHVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
+KHID H++RE VS + + +V T Q+AD FTK L R F RS L V
Sbjct: 1288 RSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKMRSLLGV 1341
>At4g14460 retrovirus-related like polyprotein
Length = 1489
Score = 545 bits (1404), Expect = e-155
Identities = 367/1103 (33%), Positives = 524/1103 (47%), Gaps = 150/1103 (13%)
Query: 307 MDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSRSASHSVPLSNVLVVPR 366
+D+GA+SH+ L+ + SG +HIT + L NVL VP
Sbjct: 484 IDSGASSHVCSDLAMFRELKSVSGT----------VHITQ--------KLILHNVLHVPD 525
Query: 367 LTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPCDKGFYVLDQGSQALLATS 426
NL+SVS L + + A F D +IQ G ++G+G Y+L+ + + S
Sbjct: 526 FKFNLMSVSSLVKTISCSAHFYVDCCLIQELSQGLMIGRGRLYHNLYILETENTS---PS 582
Query: 427 SSLPRASF---------ELWHSRLDHVNFDIIKKLHKLGCFNVSSILPKPICCTSCQMAK 477
+S P A LWH RL H + +++KL
Sbjct: 583 TSTPAACLFTGSVLNDGHLWHQRLGHPSSVVLQKL------------------------- 617
Query: 478 SKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRKSD 537
KRL ++ AS DLVH D+WGP + S++GF YF+ VDD ++ TW Y L+ K D
Sbjct: 618 -KRLAYISHNNLASNPFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRNKKD 676
Query: 538 FYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQNGR 597
V F V QF+ +K +SDN E ++ G+LH F C +T QN
Sbjct: 677 VSSVFPEFIKLVSTQFNAKIKAIRSDNAPELGFTEI---VKEHGMLHHFSCAYTPQQNSV 733
Query: 598 VERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVAPT 657
VERKH+H+L + A+L+ S++ YW +TAV++INR+PS +L+++ P++L+ P
Sbjct: 734 VERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPD 793
Query: 658 YANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHAQF 717
Y+ FGC F + + KF+PR C+FLGY S +KG+K D + VSR+ F
Sbjct: 794 YSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVF 853
Query: 718 DEFCFPLTGSKSSPNDLVVFTFYEPAAGSPPSLQPVILVVPESSPPTGPL-----PCPSC 772
E FP S+ + +F P S+ P L P T PL P+
Sbjct: 854 KEHVFPFKTSELLNKAVDMF---------PNSILP--LPAPLHFVETMPLIDEDSLIPTT 902
Query: 773 VD---PDVQPVPVDDAPPSPVPHN--------DAPPLPAPTSPTPPATPLVVTQAPPTSP 821
D D A PS +P + D+ +P S P +++ +
Sbjct: 903 TDSRTADNHASSSSSALPSIIPPSSNTETQDIDSNAVPITRSKRTTRAPSYLSEYHCSLV 962
Query: 822 P---TTPPAVTQVPLAPVDARPRTRS*NGIFKPNP-------RYALVHAQPTGLLTALHT 871
P T PP + +P+ P+ P + + K P Y + A +T
Sbjct: 963 PSISTLPPTDSSIPIHPL---PEIFTASSPKKTTPYPISTVVSYDKYTPLCQSYIFAYNT 1019
Query: 872 VT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGT 931
T PK F AMK W+ +EL A+ TW++ P NVVG K VF K++ DGT
Sbjct: 1020 ETEPKTFSQAMKSEKWIRVAVEELQAMELNKTWSVESLPPDKNVVGCKWVFTIKYNPDGT 1079
Query: 932 VERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHG 991
VER K LVAQG TQ G D+ TFSPV K T+ +++L L + L Q+DV +AFLHG
Sbjct: 1080 VERYKARLVAQGFTQQEGIDFLDTFSPVAKLTSAKMMLGLAAITGWTLTQMDVSDAFLHG 1139
Query: 992 HLTETVYMEQPHGFVDLVSRLMCVG*TRLSTASNRRLVLGFSA*ALFSCVLVFRVVGLIH 1051
L E ++M P G+ ++ C L+ + GL
Sbjct: 1140 DLDEEIFMSLPQGYTPPAGTILPPNPV---------------------CRLLKSIYGLKQ 1178
Query: 1052 PCSFFYKGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGLEITY 1111
+YK + LVY+DDI++ ++ + + A L EF IK LG +FLGL
Sbjct: 1179 ASRQWYKRFVA--ALVYIDDIMIASNNDAEVENLKALLRSEFKIKDLGPARFFLGL---- 1232
Query: 1112 TADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHLV-SSGEGYSDPTHYRSLVGALQ 1170
L P+ HLV G +PT YR L+G L
Sbjct: 1233 ----------------------LGCKPSSIPMDPTLHLVRDMGTPLPNPTAYRKLIGRLL 1270
Query: 1171 YLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAVLGYS 1230
YLTITRPD++YAV+ +SQF+ P+ H QA +++RY+ A GL + + G+S
Sbjct: 1271 YLTITRPDITYAVHQLSQFISAPSDIHLQAAHKVLRYIKANPGQGLMYSADYEICLNGFS 1330
Query: 1231 DADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELVWLLN 1290
DADWA C D RRS G+ I+LG +L+SW +KKQ + SS ESEYR+MA E++WL
Sbjct: 1331 DADWAACKDTRRSISGFCIYLGTSLISWKSKKQAVASRSSTESEYRSMAQATCEIIWLQQ 1390
Query: 1291 LLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAVRHVP 1350
LL +L + L+ P DN+SAL + NPV H+ KHI++DCH VR+ + +G L HVP
Sbjct: 1391 LLKDLHIPLTCPAKLFCDNKSALHSSLNPVFHERTKHIEIDCHTVRDQIKAGNLKALHVP 1450
Query: 1351 TSLQLADIFTKVL-PRPLFDLFR 1372
T Q ADI TK L P P L R
Sbjct: 1451 TENQHADILTKALHPGPFHHLLR 1473
Score = 32.3 bits (72), Expect = 1.9
Identities = 22/125 (17%), Positives = 49/125 (38%), Gaps = 16/125 (12%)
Query: 23 SGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFVQWQAR 82
+ +F W + + L +N ++ + P P + F W
Sbjct: 54 ASDFHSWRRSILMALNVRNKLGFINGTITKP----------------PEDHRDFGAWSRC 97
Query: 83 DRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQLMRRGSL 142
+ V++ L++S+ ++ L T + +W L S + + R + +L + +GS+
Sbjct: 98 NDIVSTWLMNSVDKKIGQSLLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKLSKIEQGSM 157
Query: 143 SVSEY 147
+S Y
Sbjct: 158 DISTY 162
>At1g60020 hypothetical protein
Length = 1194
Score = 542 bits (1396), Expect = e-154
Identities = 378/1230 (30%), Positives = 592/1230 (47%), Gaps = 145/1230 (11%)
Query: 20 KLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFVQW 79
KL N+++W++QV A+L +L +D V PSE + V A NP + W
Sbjct: 30 KLTPTNYIMWNRQVHALLDGYDLAGYIDGSVTAPSEMITTAG-------VSAANPAYKFW 82
Query: 80 QARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQLMRR 139
+ +D+ + S +L ++T + TA ++W L S YA+ + ++R ++ +
Sbjct: 83 KRQDKLIYSAILGTITTTIQPLLSRSNTAAEIWEKLKSIYATPSWGHIQQMRQHIKQWSK 142
Query: 140 GSLSVSEY--GRKIR*S--------VANDDKVHWFLRGLGPSYANFSTGQLDQVPL---- 185
G+ +++EY G R + + +++ + L GL Y + +DQ +
Sbjct: 143 GTKTITEYFQGHTTRFDELALLGKPLEHAEQIEFLLGGLSEDYKSV----VDQTEIRDKP 198
Query: 186 PLFTDILWKV---ESHAIFQASLEDYVTPPS--AAFHARNPTRSSGSQSSGGGHRGNSSS 240
P T++L K+ E+ + A+ T PS A HA N +S + +R N S
Sbjct: 199 PTLTELLEKLLNREAKLMCAAA-----TTPSLPATAHAANYKGNSNNNQYNNNNRNNKSH 253
Query: 241 GSRPRRDNGGSHCRGSYTPRCQLCRKQGHYAAKCPVRWDRPSESANLTHSFAAGCSLNNS 300
GS S +TP W +P +A + +
Sbjct: 254 GSSYNSQQ--SIPASPFTP------------------W-QPRANAAIASPY--------- 283
Query: 301 NRSDKYMDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSR---SASHSVP 357
N ++ +D+GAT H+T L+ L+ Y+G + V + +G+GL I+H GS + S S+
Sbjct: 284 NANNWLLDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGSALISTPSRSLA 343
Query: 358 LSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPCDKGFYVLDQ 417
L++VL VP + NL+SV ++ + V F F +++ +TG L +G Y
Sbjct: 344 LTDVLYVPNIHKNLISVYRMCNANKVSVEFFPAHFQVKDLKTGVQLLQGRTKDELYEWPV 403
Query: 418 GSQALLAT-SSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSSILPKPICCTSCQMA 476
+ +++ P+ WHSRL H + +K + VS+ L K C+ C +
Sbjct: 404 NPPKPSSHFTTTTPKTDLTSWHSRLGHPSLSTLKVVVSQFSLPVSNSLQKQFNCSDCLLN 463
Query: 477 KSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRKS 536
K+ +L + N ++ L+ ++ DLW SP+ S+D F Y+++ VD +++++WFYP+K+KS
Sbjct: 464 KTHKLPFHTNTITSTQPLEYLYIDLW-TSPIVSIDNFKYYLVIVDHYTRYSWFYPIKQKS 522
Query: 537 DFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQNG 596
DV + FKA V N+F R + SDNG EF +++ SS+G+ H PHT NG
Sbjct: 523 HVKDVFMTFKALVANKFQRKIIHLYSDNGGEFI--ALRSFLSSNGITHLTTPPHTPEHNG 580
Query: 597 RVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVAP 656
ERKHRH++E GL +L + + SYW +AF+ A+Y+INR+ S V+ P++ LF AP
Sbjct: 581 ISERKHRHIVETGLTLLGQASMPKSYWSYAFTIAIYLINRMSSDVIGGISPYKRLFGQAP 640
Query: 657 TYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHAQ 716
Y FGC FP LRPY +K R PC+FLGY+ + C + TT R Y SRH Q
Sbjct: 641 NYLKLRVFGCLCFPWLRPYTTHKLDDRPAPCVFLGYSQTQSAYLCLNRTTGRVYTSRHVQ 700
Query: 717 FDEFCF--------PLTGSKSSPNDLVVFTFYEPAAGSPPSLQPVILVVPESSPPTGPLP 768
F E + P T + S N + T P PS+ P P PP+ P P
Sbjct: 701 FVENTYPFTKPTLDPFTNLEESNNHSITTTVPSPPFVQLPSVPPPTR-DPHQPPPSQPAP 759
Query: 769 CPSCVDPDVQPVPVDDAPPS---------------------PVPHNDAPPLPAPT----- 802
PS + P PV + P P N P+ +PT
Sbjct: 760 SPSPLSPPSMSSPVMTSSPQFSSNRDSTTLHGDYSHVDYGLSSPSNPPGPITSPTTSKSP 819
Query: 803 -------------SPTPPATPLVVTQAPPTSPPTTPPAVTQVPLAPVDARP-RTRS*NGI 848
+ TPP +P + +P P +P + P P + RTR+ N I
Sbjct: 820 SEPTSSPSHSNQPNKTPPNSPSSSSSSPTPIPSPSPQSSNSPPPPPQNQHSMRTRAKNNI 879
Query: 849 FKPNPRYALVHAQPTGLLTALHTVT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVP 908
KP + L A P G TV A++ P+W AM +E +A + T+ LVP
Sbjct: 880 TKPIKKLTLA-ATPKGKSKIPTTVA------EALRDPNWRNAMSEEFNAGLRNSTYDLVP 932
Query: 909 RPYTTNVVGSK*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLI 968
N VG++ +F K++ DG++ R K +A+G Q G DYS TFSPV+K+TTV+ +
Sbjct: 933 PKPHQNFVGTRWIFTIKYNPDGSINRYKARFLAKGFHQQHGLDYSNTFSPVIKSTTVQTV 992
Query: 969 LSLVVLND*QLHQLDVKNAFLHGHLTETVYMEQPHGFVD------LVSRLMCVG*TRLST 1022
L + V + QLD+ NAFL G LTE VY+ QP GF++ + + + +
Sbjct: 993 LDIAVSRSWDIRQLDINNAFLQGRLTEDVYVAQPPGFINPDRPNYVCHLKKALHGLKQAP 1052
Query: 1023 ASNRRLVLGFSA*ALFSCVLVFRVVGLIHPCSFFYKGHIT--LYLLVYVDDIILTGSDPS 1080
+ + + GF L +C V S F + H +Y+LVYVDD ++TGS+ +
Sbjct: 1053 RAWYQELRGF----LLTCGFTNSVAN----TSLFIRQHNKDYIYILVYVDDFLITGSNSN 1104
Query: 1081 LLT*FIACLNDEFAIKYLGKLGYFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVL 1140
L+ FI CL + F++K LG+L YFL +E T T GL L +Y DLL+ ML+A V
Sbjct: 1105 LIAQFITCLANRFSLKDLGQLSYFLEIEATRTKAGLHLMQRRYVLDLLTKTKMLDAKTVS 1164
Query: 1141 TPLAAGSHL-VSSGEGYSDPTHYRSLVGAL 1169
TP++ L ++SG +P YR ++G+L
Sbjct: 1165 TPMSPTPKLTLTSGTPIDNPGGYRQILGSL 1194
>At2g07010 putative retroelement pol polyprotein
Length = 1413
Score = 496 bits (1277), Expect = e-140
Identities = 440/1498 (29%), Positives = 621/1498 (41%), Gaps = 270/1498 (18%)
Query: 18 TVKLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLFV 77
+V L N+ WS ++ LQ + ++ ++ P P NP +
Sbjct: 41 SVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKP----------------PLDNPDYE 84
Query: 78 QWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQLM 137
WQA + + + +S+ + S A +W+ L ++ NK +++ +L
Sbjct: 85 NWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAAC 144
Query: 138 RR-GSLSVSEYGRKIR---------------------------*SVANDDKVHWFLRGLG 169
R+ G + YGR + ++K+H F+ GL
Sbjct: 145 RQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLD 204
Query: 170 PS-YANFSTGQLDQVPLPLFTDILWKV--ESHAIFQASLEDYVTPPSAAFHARNPTRSSG 226
S + S + P P +I +V E + + + ++ + G
Sbjct: 205 DSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGFLTRQSEVTADG 264
Query: 227 SQSS---------------------------------------GGGHRGNSSSGSRPRRD 247
S GG RG+SS G R
Sbjct: 265 RTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRSS 324
Query: 248 NGGSHCRGSYTPRCQLCRKQGHYAAKCPVRWDRPSESANLTHSFAAGCSLNNSNRSDK-- 305
+ RG R Q+ + P P + +T N+ SDK
Sbjct: 325 GSNNSGRG----RGQVTAAHATTSNLSPFPEFTPDQLRVITQMI----QNKNNGTSDKLS 376
Query: 306 --------YMDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSRSASHSVP 357
+DTGA+ HMT LS LT + + V +G +G+ S +V
Sbjct: 377 GKMKLGDVILDTGASHHMTGQLSLLT-NIVTIPSCSVGFADGRKTFAISMGTFKLSETVS 435
Query: 358 LSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPCDKG-FYVLD 416
LSNVL VP L +L+SVSKL + A+F V+Q+R + ++G G G +Y+ D
Sbjct: 436 LSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVYYLTD 495
Query: 417 QGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSSILPKPICCTSCQMA 476
+ + + A LWH RL H +F + L L F+ SS C C A
Sbjct: 496 AATTTVHKVDITTDHA---LWHQRLGHPSFSV---LSSLPLFSGSSCSVSSRSCDVCFRA 549
Query: 477 KSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRKS 536
K R V D+ +++ L+HCD+WGP V S G YF+ VDDFS+ W Y L KS
Sbjct: 550 KQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKS 609
Query: 537 DFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQNG 596
+ VL F A+ E QF +S+K+ +SDNGTEF + + F G++H+ C T QNG
Sbjct: 610 EVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFM--CLSSYFKEQGIVHQTSCVGTPQQNG 667
Query: 597 RVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVAP 656
RVERKHRH+L + A+L+ + + +W A TA Y+INR PS + + P++LL P
Sbjct: 668 RVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKP 727
Query: 657 TYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHAQ 716
Y FG + K+KF R CIF+GY KG+K +D +T+ VSR
Sbjct: 728 DYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVV 787
Query: 717 FDEFCFPLTGSKSSPNDLVVFTFYEPAAGSPPSLQ----PVILVVPESSPPTGPLPCPSC 772
F E FP ++ T Y P P + P + S P C
Sbjct: 788 FRENVFPYATNEGD-------TIYTPPVTCPITYDEDWLPFTTLEDRGSDENYLSDPPVC 840
Query: 773 V-----------DPDVQPVPVDD-------APPSPVPHNDAPPLPAPTSPTPPA--TPLV 812
V P P PVDD P+ P N + T+ +PP T +
Sbjct: 841 VTNVSESDTEHDTPQSLPTPVDDPLSPSTSVTPTQTPTNSSSSTSPSTNVSPPQQDTTPI 900
Query: 813 VTQAPPT--SPPTTPPA---------VTQVPLAPVDARPRTRS*NGIFKPNPRYALVHAQ 861
+ PP PA + P P P T + + N +Y L
Sbjct: 901 IENTPPRQGKRQVQQPARLKDYILYNASCTPNTPHVLSPSTSQSSSSIQGNLQYPLTDYI 960
Query: 862 PTGLLTALHTV--------T*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTT 913
+A H V PK FK +K W AM E+ AL TW +V P
Sbjct: 961 SDECFSAGHKVFLAAITANDEPKHFKEDVKVKVWNDAMYKEVDALEVNKTWDIVDLPTGK 1020
Query: 914 NVVGSK*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVV 973
+GS+ V++TKF++DGTVER K LV QG QI G DY+ TF+PVVK TTVR +L LV
Sbjct: 1021 VAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLVA 1080
Query: 974 LND*QLHQLDVKNAFLHGHLTETVYMEQPHGF----VDLVSRLMCVG*TRLSTASNRRLV 1029
N +++Q+DV NAFLHG L E VYM+ P GF D V RL R+ +
Sbjct: 1081 ANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRL-------------RKSL 1127
Query: 1030 LGFSA------*ALFSCVLVFRVVGLIHPCSFF---YKGHITLYLLVYVDDIILTGSDPS 1080
G L + F + SFF KG I L +LVYVDD+I+ G+D
Sbjct: 1128 YGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKG-IELRVLVYVDDLIICGNDEY 1186
Query: 1081 LLT*FIACLNDEFAIKYLGKLGYFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVL 1140
++ F L F++K LGKL YFLG+E++ D + AH LEA+ +
Sbjct: 1187 MVQKFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDA-----PREAH--------LEAAMRI 1233
Query: 1141 TPLAAGSHLVSSGEGYSDPTHYRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQA 1200
G S G+G L DL+ V S F P
Sbjct: 1234 VRYLKG----SPGQG---------------ILLSANKDLTLEVYCDSDFQSCP------- 1267
Query: 1201 VKRIIRYVCAMQHFGLTFRRTSSPAV-LGYSDADWARCTDHRRSTYGYAIFLGYNLLSWS 1259
LT R S+ V LG S W
Sbjct: 1268 ---------------LTRRSLSAYVVLLGGSPISW------------------------K 1288
Query: 1260 AKKQPSVAHSSCESEYRAMANTASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNP 1319
KKQ +V+HSS E+EYRAM+ E+ WL LL EL + L+AP D+++A+ +A NP
Sbjct: 1289 TKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSKAAISIAANP 1348
Query: 1320 VAHKHAKHIDLDCHFVRELVSSGRLAVRHVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
V H+ KHI+ DCH VR+ V G + HV TS QLADIFTK L R F SKL +
Sbjct: 1349 VFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGI 1406
>At2g14930 pseudogene
Length = 1149
Score = 444 bits (1143), Expect = e-124
Identities = 263/741 (35%), Positives = 392/741 (52%), Gaps = 45/741 (6%)
Query: 17 ITVKLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPLF 76
+TVKL N++LW Q + L Q L V+ A P+ + P + + +P NP +
Sbjct: 19 VTVKLTDRNYILWKSQFESFLSGQGLLGFVNGAYAAPTGTVSGPQDAGVTEAIP--NPDY 76
Query: 77 VQWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQL 136
W D+ V ++E+ LS + + T+ +VW L + + +R L+ L
Sbjct: 77 QAWFRSDQVV-------MSEDILSVVVGSKTSHEVWMNLAKHFNRISSSRIFELQRRLHS 129
Query: 137 MRRGSLSVSEYGRKIR*----------SVANDDKVHWFLRGLGPSYANFST---GQLDQV 183
+ + ++ EY R ++ VA K+ + GL Y T G LD
Sbjct: 130 LSKEGKTMEEYLRYLKTICDQLASVGSPVAEKMKIFAMVHGLTREYEPLITSLEGTLDAF 189
Query: 184 PLPLFTDILWKVESHAIFQASLEDYVTPPSAAFHARNPTRSSGSQSSGGGHRGNSSSGSR 243
P P + D+++++++ F L+ Y + A N RSS G +RG + +R
Sbjct: 190 PGPSYEDVVYRLKN---FDDRLQGYTVTDVSPHLAFNTFRSSNRGRGGRNNRGKGNFSTR 246
Query: 244 PRR-----DNGGSHCRGSYTPRCQLCRKQGHYAAKCPVRWDRPSESANLTHSFAAGCSLN 298
R + S S P CQ+C K+GHYA +C W R +S + + AA S
Sbjct: 247 GRGFQQQFSSSSSSVSASEKPMCQICGKRGHYALQC---WHRFDDSYQHSEAAAAAFSAL 303
Query: 299 N----SNRSDKYMDTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSR---S 351
+ S+ S D+ AT+H+T++ S+L Y GND V+ +G L ITHIGS S
Sbjct: 304 HITDVSDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFLPITHIGSANLPS 363
Query: 352 ASHSVPLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPC-DK 410
S ++PL +VLV P + +L+SVSKLT+D+ F+AD +++++ T VL KG +
Sbjct: 364 TSGNLPLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKGSSTSE 423
Query: 411 GFYVLDQGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKLGCFNVSSILPKPICC 470
G Y L+ + ++ + +A+ E+WH RL H N +++ L ++ K C
Sbjct: 424 GLYKLENPKFQMFYSTRQV-KATDEVWHMRLGHPNPQVLQLLANKKAIQINKSTSK--MC 480
Query: 471 TSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFY 530
SC++ KS RL + AS L+ VHCDLWGP+PV+S+ GF Y+VIF+D+ S+F WFY
Sbjct: 481 ESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQYYVIFIDNRSRFCWFY 540
Query: 531 PLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPH 590
PLK KSDF + ++F++FVEN + FQSD G EFT+N+ SG+ H CPH
Sbjct: 541 PLKHKSDFCSLFMKFQSFVENLLQTKIGTFQSDGGGEFTSNRFLQHLQESGIQHYISCPH 600
Query: 591 TQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVL-SDQIPFQ 649
T QNG ERKHR + E GL +++ S +WV AF TA ++ N +P+ L S P+Q
Sbjct: 601 TPQQNGLAERKHRQLTERGLTLMFQSKAPQRFWVEAFFTANFLSNLLPTSALDSSTTPYQ 660
Query: 650 LLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRT 709
+LF AP Y+ FGC FP LR Y +NKF PR CIFLGY +KG++CF P T+R
Sbjct: 661 VLFGKAPDYSALRTFGCACFPTLRAYARNKFDPRSLKCIFLGYTEKYKGYRCFFPPTNRV 720
Query: 710 YVSRHAQFDEFCFPLTGSKSS 730
Y+SRH FDE FP + +S
Sbjct: 721 YLSRHVLFDESSFPFIDTYTS 741
Score = 159 bits (401), Expect = 1e-38
Identities = 99/250 (39%), Positives = 142/250 (56%), Gaps = 5/250 (2%)
Query: 923 RTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQL 982
R K + DG++++ K LVAQG Q G DY T+SPVV++ TVR +L L + + +L Q+
Sbjct: 902 RVKLNVDGSLDKYKARLVAQGFKQEEGIDYLETYSPVVRSATVRAVLHLSTIMNWELKQM 961
Query: 983 DVKNAFLHGHLTETVYMEQPHGFVDLVSRLMCVG*TRLSTASNRRLVLGFSA*ALFSCVL 1042
DVKN FLHG LTETVYM+QP GF+D + + F + F +L
Sbjct: 962 DVKNGFLHGDLTETVYMKQPAGFIDKAHPDHVCLLHKALYGLKQAPRAWFDKFSKF--LL 1019
Query: 1043 VFRVVGLIHPCSFF--YKGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGK 1100
F V + S F K + LL+YVDD+++TG+ LL+ ++ LN +F +K LG+
Sbjct: 1020 SFGFVCSMSDPSLFVCVKNKDVIMLLLYVDDMVITGNSSKLLSSLLSELNKQFKMKDLGR 1079
Query: 1101 LGYFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPL-AAGSHLVSSGEGYSDP 1159
L YFLG++ + + GLFL KYA DLL+ A M S V TPL + E + +P
Sbjct: 1080 LSYFLGIQAQFHSQGLFLSQQKYAEDLLATAAMSNCSPVATPLPLQPERTPNQTELFDNP 1139
Query: 1160 THYRSLVGAL 1169
+++RSL G L
Sbjct: 1140 SYFRSLAGKL 1149
>At1g48710 hypothetical protein
Length = 1352
Score = 368 bits (945), Expect = e-101
Identities = 221/587 (37%), Positives = 318/587 (53%), Gaps = 29/587 (4%)
Query: 799 PAPTSPTPPATPLVVTQAPPTSPPTTPPAVTQVPLAPVDARPRTRS*NGIFKPNPRYALV 858
P PT PP+ PT+PPT+P + +Q+ + + PR RS + Y +
Sbjct: 776 PEPTREEPPSEE-------PTTPPTSPTS-SQIEESSSERTPRFRSIQEL------YEVT 821
Query: 859 HAQPTGLLTALHTVT*PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGS 918
Q L L P F+ A++ W AM++E+ ++ K TW L P +G
Sbjct: 822 ENQENLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGV 881
Query: 919 K*VFRTKFHSDGTVERLKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*Q 978
K V++ K +S G VER K LVA+G Q G DY F+PV + TVRLI+SL N +
Sbjct: 882 KWVYKAKKNSKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWK 941
Query: 979 LHQLDVKNAFLHGHLTETVYMEQPHGFV-----DLVSRLM--CVG*TRLSTASNRRLVLG 1031
+HQ+DVK+AFL+G L E VY+EQP G++ D V RL G + A N R+
Sbjct: 942 IHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKY 1001
Query: 1032 FSA*ALFSCVLVFRVVGLIHPCSFFYKGHITLYLLVYVDDIILTGSDPSLLT*FIACLND 1091
F C H + L +YVDD+I TG++PS+ F +
Sbjct: 1002 FKEKDFIKCPYE-------HALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTK 1054
Query: 1092 EFAIKYLGKLGYFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHLVS 1151
EF + +G + Y+LG+E+ +G+F+ YA ++L M +++ V TP+ G L
Sbjct: 1055 EFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSK 1114
Query: 1152 SGEGYS-DPTHYRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCA 1210
EG DPT ++SLVG+L+YLT TRPD+ YAV VS++++ PT HF+A KRI+RY+
Sbjct: 1115 KEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKG 1174
Query: 1211 MQHFGLTFRRTSSPAVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSS 1270
+FGL + TS ++GYSD+DW D R+ST G+ ++G +W +KKQP V S+
Sbjct: 1175 TVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLST 1234
Query: 1271 CESEYRAMANTASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDL 1330
CE+EY A + +WL NLL EL + P DN+SA+ +A+NPV H +KHID
Sbjct: 1235 CEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDT 1294
Query: 1331 DCHFVRELVSSGRLAVRHVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
H++RE VS + + +V T Q+ADIFTK L R F RS L V
Sbjct: 1295 RYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1341
Score = 227 bits (579), Expect = 3e-59
Identities = 208/820 (25%), Positives = 363/820 (43%), Gaps = 111/820 (13%)
Query: 21 LNSGNFLLWSKQVTAILQNQNLFDIVDP-IVAPPSEFML-QPVSSALHHVVPAPNPLFVQ 78
L N+ WS ++ AIL ++++IV+ + P +E L Q L
Sbjct: 13 LTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDS---------- 62
Query: 79 WQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRD-----E 133
+ RD+ L+ L E+ + + AT+A++ W L ++Y ++ +++RL+ E
Sbjct: 63 -RKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFE 121
Query: 134 LQLMRRGSLSVSEYGRKIR*SVANDDK-----------VHWFLRGLGPSYANFSTGQLDQ 182
M+ G L VS+Y ++ +V N+ K + LR L + + T +
Sbjct: 122 ALQMKEGEL-VSDYFSRVL-TVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 183 VPLPLFT--DILWKVESHAIFQASLEDYVTPP-----SAAFHARNPTRSSGSQSSGGGHR 235
L T +L ++++ + ED + + + ++ R G Q G G
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 236 G-NSSSGSRPRRDN------------GGSHCRGSY---TPRCQLCRKQGHYAAKCPVRWD 279
G + G RP DN G H + Y + +C C K GHYA++C +
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 280 RP-SESANLTHS--------FAAGCSLNNSNRSDK-YMDTGATSHMTHSLSQLT-YSHAY 328
+ E AN A + + K Y+D+GA++HM S +
Sbjct: 300 KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 329 SGNDRVLVGNGAGLHITHIGS-----RSASHSVPLSNVLVVPRLTNNLVSVSKLT-RDHN 382
GN V +G+ + + + G+ ++ H +SNV +P + N++S+ +L + ++
Sbjct: 360 RGN--VALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSMKTNILSLGQLLEKGYD 416
Query: 383 VRAIFEADSFVIQNRQTGAVLGKGPCDKG-FYVLDQGSQALLATSSSLPRASFELWHSRL 441
+R D+ + Q ++ K P K +VL+ + S+ LWH R
Sbjct: 417 IRL---KDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESW-LWHLRF 472
Query: 442 DHVNFDIIKKLHK------LGCFNVSSILPKPICCTSCQMAKS-KRLVCYDNHKRASAVL 494
H+NF ++ L + L C N + + C C + K K ++ RA L
Sbjct: 473 GHLNFGGLELLSRKEMVRGLPCINHPNQV-----CEGCLLGKQFKMSFPKESSSRAQKSL 527
Query: 495 DLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRKSDFYDVLVRFKAFVENQFS 554
+L+H D+ GP S+ +YF++F+DDFS+ TW Y LK KS+ +++ +FKA VE +
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESG 587
Query: 555 RSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQNGRVERKHRHVLELGLAMLY 614
+K +SD G EFT+ + +G+ + P + QNG ERK+R +LE+ +ML
Sbjct: 588 LVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLK 647
Query: 615 HSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVAPTYANFHPFGCRVFPCLRP 674
+ W A + AVY++NR P+K +S + P + ++ FG +
Sbjct: 648 SKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPD 707
Query: 675 YMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHAQFDEFCFPLTGS---KSSP 731
++K + IF+GY+++ KG+K ++P T +T +SR+ FDE G S+
Sbjct: 708 EKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE-----EGEWDWNSNE 762
Query: 732 NDLVVFTFY-----EPAAGSPPSLQPVILVVPESSPPTGP 766
D F + EP PPS +P ++PPT P
Sbjct: 763 EDYNFFPHFEEDEPEPTREEPPSEEP-------TTPPTSP 795
>At1g58140 hypothetical protein
Length = 1320
Score = 353 bits (906), Expect = 4e-97
Identities = 201/511 (39%), Positives = 289/511 (56%), Gaps = 15/511 (2%)
Query: 875 PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGTVER 934
P F+ A++ W AM++E+ ++ K TW L P +G K V++ K +S G VER
Sbjct: 806 PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVER 865
Query: 935 LKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLT 994
K LVA+G +Q G DY F+PV + TVRLI+SL N ++HQ+DVK+AFL+G L
Sbjct: 866 YKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 925
Query: 995 ETVYMEQPHGFV-----DLVSRLM--CVG*TRLSTASNRRLVLGFSA*ALFSCVLVFRVV 1047
E VY+EQP G++ D V RL G + A N R+ F C
Sbjct: 926 EEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE---- 981
Query: 1048 GLIHPCSFFYKGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFLGL 1107
H + L +YVDD+I TG++PS+ F + EF + +G + Y+LG+
Sbjct: 982 ---HALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGI 1038
Query: 1108 EITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHLVSSGEGYS-DPTHYRSLV 1166
E+ +G+F+ YA ++L M +++ V TP+ G L EG DPT ++SLV
Sbjct: 1039 EVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLV 1098
Query: 1167 GALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSPAV 1226
G+L+YLT TRPD+ YAV VS++++ PT HF+A KRI+RY+ +FGL + TS +
Sbjct: 1099 GSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKL 1158
Query: 1227 LGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASELV 1286
+GYSD+DW D R+ST G+ ++G +W +KKQP V S+CE+EY A + +
Sbjct: 1159 VGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAI 1218
Query: 1287 WLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSSGRLAV 1346
WL NLL EL + P DN+SA+ +A+NPV H +KHID H++RE VS + +
Sbjct: 1219 WLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQL 1278
Query: 1347 RHVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
+V T Q+ADIFTK L R F RS L V
Sbjct: 1279 EYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1309
Score = 231 bits (590), Expect = 2e-60
Identities = 213/839 (25%), Positives = 372/839 (43%), Gaps = 113/839 (13%)
Query: 21 LNSGNFLLWSKQVTAILQNQNLFDIVDP-IVAPPSEFML-QPVSSALHHVVPAPNPLFVQ 78
L N+ WS ++ AIL ++++IV+ + P +E L Q L
Sbjct: 13 LTKSNYDNWSLRMKAILGAHDVWEIVEKGFIEPENEGSLSQTQKDGLRDS---------- 62
Query: 79 WQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRD-----E 133
+ RD+ L+ L E+ + + AT+A++ W L ++Y ++ +++RL+ E
Sbjct: 63 -RKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFE 121
Query: 134 LQLMRRGSLSVSEYGRKIR*SVANDDK-----------VHWFLRGLGPSYANFSTGQLDQ 182
M+ G L VS+Y ++ +V N+ K + LR L + + T +
Sbjct: 122 ALQMKEGEL-VSDYFSRVL-TVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEET 179
Query: 183 VPLPLFT--DILWKVESHAIFQASLEDYVTPP-----SAAFHARNPTRSSGSQSSGGGHR 235
L T +L ++++ + ED V + + ++ R G Q G G
Sbjct: 180 KDLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRG 239
Query: 236 G-NSSSGSRPRRDN------------GGSHCRGSY---TPRCQLCRKQGHYAAKCPVRWD 279
G + G RP DN G H + Y + +C C K GHYA++C +
Sbjct: 240 GYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSN 299
Query: 280 RP-SESANLTHS--------FAAGCSLNNSNRSDK-YMDTGATSHMTHSLSQLT-YSHAY 328
+ E AN A + + K Y+D+GA++HM S +
Sbjct: 300 KKFEEKANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESV 359
Query: 329 SGNDRVLVGNGAGLHITHIGS-----RSASHSVPLSNVLVVPRLTNNLVSVSKLT-RDHN 382
GN V +G+ + + + G+ ++ H +SNV +P + N++S+ +L + ++
Sbjct: 360 RGN--VALGDESKMEVKGKGNILIRLKNGDHQF-ISNVYYIPSMKTNILSLGQLLEKGYD 416
Query: 383 VRAIFEADSFVIQNRQTGAVLGKGPCDKG-FYVLDQGSQALLATSSSLPRASFELWHSRL 441
+R D+ + Q ++ K P K +VL+ + S+ LWH R
Sbjct: 417 IRL---KDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESW-LWHLRF 472
Query: 442 DHVNFDIIKKLHK------LGCFNVSSILPKPICCTSCQMAKS-KRLVCYDNHKRASAVL 494
H+NF ++ L + L C N + + C C + K K ++ RA L
Sbjct: 473 GHLNFGGLELLSRKEMVRGLPCINHPNQV-----CEGCLLGKQFKMSFPKESSSRAQKPL 527
Query: 495 DLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRKSDFYDVLVRFKAFVENQFS 554
+L+H D+ GP S+ +YF++F+DDFS+ TW Y LK KS+ +++ +FKA VE +
Sbjct: 528 ELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESG 587
Query: 555 RSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQNGRVERKHRHVLELGLAMLY 614
+K +SD G EFT+ + +G+ + P + QNG ERK+R +LE+ +ML
Sbjct: 588 LVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLK 647
Query: 615 HSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVAPTYANFHPFGCRVFPCLRP 674
+ W A + AVY++NR P+K +S + P + P ++ FG +
Sbjct: 648 SKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPD 707
Query: 675 YMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHAQFDEFCFPLTGS---KSSP 731
++K + IF+GY+++ KG+K ++P T +T +SR+ FDE G S+
Sbjct: 708 EKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDE-----EGEWDWNSNE 762
Query: 732 NDLVVFTFY-----EPAAGSPPSLQPVILVVPESSPPTGPLPCPSCVDPDVQPVPVDDA 785
D F + EP PPS +P ++PPT P S ++ +P+ +A
Sbjct: 763 EDYNFFPHFEEDKPEPTREEPPSEEP-------TTPPTS--PTSSQIEEKCEPMDFQEA 812
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 345 bits (884), Expect = 1e-94
Identities = 204/516 (39%), Positives = 288/516 (55%), Gaps = 22/516 (4%)
Query: 875 PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGTVER 934
P+ + A W A++ E+ A+ + TW + P VG K VF KFH+DG++ER
Sbjct: 947 PQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHADGSLER 1006
Query: 935 LKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLT 994
K +VA+G TQ G DY+ TFSPV K TV+L+L + L+QLD+ NAFL+G L
Sbjct: 1007 FKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAFLNGDLE 1066
Query: 995 ETVYMEQPHGFVD-----LVSRLMCVG*TRLSTA------SNRRLVLGFSA*ALFSCVLV 1043
ET+YM+ P G+ D L ++C RL + ++R+ L FS L L
Sbjct: 1067 ETIYMKLPDGYADIKGTSLPPNVVC----RLKKSIYGLKQASRQWFLKFSNSLL---ALG 1119
Query: 1044 FRVVGLIHPCSFFYKGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGY 1103
F H G + LLVYVDDI++ + L F ++ LG L Y
Sbjct: 1120 FEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKY 1179
Query: 1104 FLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHLVSSGEGY--SDPTH 1161
FLGLE+ T++G+ L KYA +LL+ A ML+ P+ L S +G D
Sbjct: 1180 FLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRL-SKNDGLLLEDKEM 1238
Query: 1162 YRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRT 1221
YR LVG L YLTITRPD+++AVN + QF P H AV ++++Y+ GL +
Sbjct: 1239 YRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAE 1298
Query: 1222 SSPAVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANT 1281
+ GY+DADW C D RRST G+ +F+G +L+SW +KKQP+V+ SS E+EYRA+A
Sbjct: 1299 DDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALA 1358
Query: 1282 ASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSS 1341
+ E+ WL LL LRV S P+ SD+ +A+++A NPV H+ KHI++DCH VRE + +
Sbjct: 1359 SCEMAWLSTLLLALRVH-SGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDN 1417
Query: 1342 GRLAVRHVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
G+L + HV T Q+ADI TK L F SK+ +
Sbjct: 1418 GQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSI 1453
Score = 260 bits (664), Expect = 4e-69
Identities = 160/470 (34%), Positives = 240/470 (51%), Gaps = 15/470 (3%)
Query: 298 NNSNRSDKYM-DTGATSHMTHSLSQLTYSHAYSGNDRVLVGNGAGLHITHIGSRSASHSV 356
+NS SD ++ D+GAT H++H +L + S V + G + I+ +G+ + +
Sbjct: 434 HNSLSSDTWVIDSGATHHVSHD-RKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDI 492
Query: 357 PLSNVLVVPRLTNNLVSVSKLTRDHNVRAIFEADSFVIQNRQTGAVLGKGPCDKGFYVLD 416
L NVL +P NL+S+S LT D R IF+ IQ+ G LG+G YVLD
Sbjct: 493 ILQNVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLD 552
Query: 417 QGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHK-LGCFNVSSILPKPICCTSCQM 475
S A+ + +WH RL H +F + L + LG + K C C +
Sbjct: 553 TQSPAISVNAV----VDVSVWHKRLGHPSFSRLDSLSEVLGTTRHKN--KKSAYCHVCHL 606
Query: 476 AKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSYFVIFVDDFSQFTWFYPLKRK 535
AK K+L + ++ +L+H D+WGP V +V+G+ YF+ VDD S+ TW Y LK K
Sbjct: 607 AKQKKLSFPSANNICNSTFELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSK 666
Query: 536 SDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQALFSSSGVLHRFLCPHTQAQN 595
SD V F VENQ+ +K +SDN E + + + G++ CP T QN
Sbjct: 667 SDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELAFTE---FYKAKGIVSFHSCPETPEQN 723
Query: 596 GRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIINRVPSKVLSDQIPFQLLFQVA 655
VERKH+H+L + A+++ S++S YW TAV++INR PS +LS++ PF++L
Sbjct: 724 SVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKL 783
Query: 656 PTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSHHKGFKCFDPTTSRTYVSRHA 715
P Y+ FGC + ++KF PR C+FLGY KG+K D ++ ++SR+
Sbjct: 784 PDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNV 843
Query: 716 QFDEFCFPLTGSKSSPNDLV-VFTFYEPAAGSPPSLQPVILVVPESSPPT 764
+F E FPL S+ S VFT +P + L P+ SP T
Sbjct: 844 EFHEELFPLASSQQSATTASDVFTPMDPLSSGNSITSH--LPSPQISPST 891
Score = 53.5 bits (127), Expect = 8e-07
Identities = 63/283 (22%), Positives = 101/283 (35%), Gaps = 58/283 (20%)
Query: 16 MITVKLNSGNFLLWSKQVTAILQNQNLFDIVDPIVAPPSEFMLQPVSSALHHVVPAPNPL 75
+I+ +L+ + WS + L +N VD + P E +P
Sbjct: 78 IISHRLDETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLE----------------SDPN 121
Query: 76 FVQWQARDRNVNSLLLSSLTEEALSETLSATTARDVWTALHSAYASRNKAREMRLRDELQ 135
F W + V S LL+S++ + L A D+W L + N R L E+Q
Sbjct: 122 FRLWSRCNSMVKSWLLNSVSPQIYRSILRLNDATDIWRDLFDRFNLTNLPRTYNLTQEIQ 181
Query: 136 LMRRGSLSVSEY-----------------------GRKIR-*SVANDDKVHWFLRGLGPS 171
+R+G++S+SEY G+ +R A K+ FL GL S
Sbjct: 182 DLRQGTMSLSEYYTLLKTLWDQLDSTEALDDPCTCGKAVRLYQKAEKAKIMKFLAGLNES 241
Query: 172 YANFSTGQLDQVPLPLFTDILWKVESHAIFQASLEDYVTPPSAAFHARNPTRSSGSQSSG 231
YA + + LP ++ + + Q + V PP AAF + S +
Sbjct: 242 YAIVRRQIIAKKALPSLAEV-YHILDQDNSQKGFFNVVAPP-AAFQVSEVSHSPITSPEI 299
Query: 232 GGHRGNSSSGSRPRRDNGGSHCRGSYTPRCQLCRKQGHYAAKC 274
+ + G P C C + GH A +C
Sbjct: 300 MYVQSGPNKG----------------RPTCSFCNRVGHIAERC 326
>At2g24660 putative retroelement pol polyprotein
Length = 1156
Score = 328 bits (840), Expect = 2e-89
Identities = 207/516 (40%), Positives = 280/516 (54%), Gaps = 47/516 (9%)
Query: 875 PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGTVER 934
PK FK A++ W AM E+ AL TW +V P +GS+ V++TK+++DG++ER
Sbjct: 639 PKHFKEAVRIKVWNDAMFKEVDALEINKTWDIVDLPPGKVAIGSQWVYKTKYNADGSIER 698
Query: 935 LKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLT 994
K LV QG Q+ G DY+ TF+PVVK TTVR +L LV N +++Q+DV NAFLHG L
Sbjct: 699 YKARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLRLVAANQWEVYQMDVNNAFLHGDLD 758
Query: 995 ETVYMEQPHGF----VDLVSRLMCVG*TRLSTASNRRLVLGFSA------*ALFSCVLVF 1044
E VYM+ P GF D V RL R+ + G L +L F
Sbjct: 759 EEVYMKLPPGFRHSHPDKVCRL-------------RKSLYGLKQAPRCWFKKLSDALLRF 805
Query: 1045 RVVGLIHPCSFF--YKGHITLYLLVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLG 1102
V SFF + I L +LVYVDD+++ G+D +L F L F++K LGKL
Sbjct: 806 GFVQGHEDYSFFSYTRNGIELRVLVYVDDLLICGNDGYMLQKFKEYLGRCFSMKDLGKLK 865
Query: 1103 YFLGLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAGSHLVS-SGEGYSDPTH 1161
YFLG+E++ ++G+FL KYA D+++ + L LTPL HL + G +D
Sbjct: 866 YFLGIEVSRGSEGIFLSQRKYALDIITDSGNLGCRPALTPLEQNHHLATDDGPLLADAKP 925
Query: 1162 YRSLVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRT 1221
YR LVG L YL TRP+LSY+V+ +SQF+QTP H A RI+R++ G+
Sbjct: 926 YRRLVGRLLYLLHTRPELSYSVHVLSQFMQTPREAHLAAAMRIVRFLKGSPGQGILLNAD 985
Query: 1222 SSPAVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANT 1281
+ + Y D+D+ C RRS Y + LG + +SW KKQ +V+HSS E+EYRAM+
Sbjct: 986 TELQLDVYCDSDFQTCPKTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVA 1045
Query: 1282 ASELVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRELVSS 1341
E+ WL LL EL NPV H+ KHI+ DCH VR+ V
Sbjct: 1046 LREIKWLRKLLKEL---------------------ANPVFHERTKHIESDCHSVRDAVRD 1084
Query: 1342 GRLAVRHVPTSLQLADIFTKVLPRPLFDLFRSKLRV 1377
G + HV T+ QLADIFTK L R F SKL +
Sbjct: 1085 GIITTHHVRTNEQLADIFTKALGRSQFLYLMSKLGI 1120
Score = 206 bits (525), Expect = 6e-53
Identities = 148/445 (33%), Positives = 210/445 (46%), Gaps = 28/445 (6%)
Query: 396 NRQTGAVLGKGPCDKGFYVLDQGSQALLATSSSLPRASFELWHSRLDHVNFDIIKKLHKL 455
+R + ++G G G Y L + A + T+ + LWH RL H +F ++ L L
Sbjct: 52 DRFSRTLIGSGEERDGVYYLTDVATAKIHTAKV--SSDQALWHQRLGHPSFSVLSSLPVL 109
Query: 456 GCFNVSSILPKPICCTSCQMAKSKRLVCYDNHKRASAVLDLVHCDLWGPSPVASVDGFSY 515
SS+ C C AK R V + ++ L+HCD+WGP V S G Y
Sbjct: 110 ---TSSSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVY 166
Query: 516 FVIFVDDFSQFTWFYPLKRKSDFYDVLVRFKAFVENQFSRSLKVFQSDNGTEFTNNKVQA 575
F+ VDDFS+ W Y L KS+ VL F + E QF +S+KV +SDNGTEF + +
Sbjct: 167 FLTIVDDFSRAVWTYLLLAKSEVRTVLTNFLVYTEKQFGKSVKVLRSDNGTEFMC--LAS 224
Query: 576 LFSSSGVLHRFLCPHTQAQNGRVERKHRHVLELGLAMLYHSHVSTSYWVHAFSTAVYIIN 635
F G++H+ C T QNGRVERKHRH+L + A+L+ + + +W A TA Y+IN
Sbjct: 225 YFREHGIVHQTSCVGTPQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLIN 284
Query: 636 RVPSKVLSDQIPFQLLFQVAPTYANFHPFGCRVFPCLRPYMKNKFSPRGTPCIFLGYNSH 695
R P+ + + P+++L P Y + FG + K+KF R C+F+GY
Sbjct: 285 RTPTSLHNGLSPYEILHNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFA 344
Query: 696 HKGFKCFDPTTSRTYVSRHAQFDEFCFPLTGS-----KSSPNDLVVFTFYEPAAGSPPSL 750
KG+K FD VSR F E FP + +SP L+V E S +L
Sbjct: 345 QKGWKVFDMEKKEFLVSRDVVFREDVFPYAATNTDHVSASPAPLLV---DEDWMVSTTTL 401
Query: 751 QPVILVVPESSPPTGPLPCPSCVDPDVQPVPVDDAPPSPV--PHNDAPPLPAPTSPTPPA 808
V ++ T P P S PD D A P V P + A P + T P A
Sbjct: 402 DRGSSAVLSANKNTDPKP-NSVTKPD------DFAEPESVTKPDDFAEP-ESVTKPDDFA 453
Query: 809 TPLVVTQAPPTSPPTT---PPAVTQ 830
P+ VT+ + P + P VT+
Sbjct: 454 EPVSVTKPDDFAEPDSVIKPVVVTE 478
>At4g23160 putative protein
Length = 1240
Score = 305 bits (780), Expect = 2e-82
Identities = 183/473 (38%), Positives = 264/473 (55%), Gaps = 15/473 (3%)
Query: 875 PKGFKSAMKHPHWLPAMEDELSALHKKFTWTLVPRPYTTNVVGSK*VFRTKFHSDGTVER 934
P + A + W AM+DE+ A+ TW + P +G K V++ K++SDGT+ER
Sbjct: 86 PSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIER 145
Query: 935 LKTCLVAQGLTQIPGFDYSLTFSPVVKATTVRLILSLVVLND*QLHQLDVKNAFLHGHLT 994
K LVA+G TQ G D+ TFSPV K T+V+LIL++ + + LHQLD+ NAFL+G L
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLD 205
Query: 995 ETVYMEQPHGFV-----DLVSRLMCVG*TRLS--TASNRRLVLGFSA*ALFSCVLVFRVV 1047
E +YM+ P G+ L +C + ++R+ L FS ++ F V
Sbjct: 206 EEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV-----TLIGFGFV 260
Query: 1048 GLIHPCSFFYKGHITLYL--LVYVDDIILTGSDPSLLT*FIACLNDEFAIKYLGKLGYFL 1105
++F K TL+L LVYVDDII+ ++ + + + L F ++ LG L YFL
Sbjct: 261 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320
Query: 1106 GLEITYTADGLFLGHAKYAHDLLSHALMLEASHVLTPLAAG-SHLVSSGEGYSDPTHYRS 1164
GLEI +A G+ + KYA DLL +L P+ + SG + D YR
Sbjct: 321 GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 380
Query: 1165 LVGALQYLTITRPDLSYAVNTVSQFLQTPTVDHFQAVKRIIRYVCAMQHFGLTFRRTSSP 1224
L+G L YL ITR D+S+AVN +SQF + P + H QAV +I+ Y+ GL + +
Sbjct: 381 LIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440
Query: 1225 AVLGYSDADWARCTDHRRSTYGYAIFLGYNLLSWSAKKQPSVAHSSCESEYRAMANTASE 1284
+ +SDA + C D RRST GY +FLG +L+SW +KKQ V+ SS E+EYRA++ E
Sbjct: 441 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500
Query: 1285 LVWLLNLLHELRVRLSAPPLFLSDNQSALFMAQNPVAHKHAKHIDLDCHFVRE 1337
++WL EL++ LS P L DN +A+ +A N V H+ KHI+ DCH VRE
Sbjct: 501 MMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.325 0.138 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,046,986
Number of Sequences: 26719
Number of extensions: 1502889
Number of successful extensions: 16853
Number of sequences better than 10.0: 470
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 6460
Number of HSP's gapped (non-prelim): 2708
length of query: 1380
length of database: 11,318,596
effective HSP length: 112
effective length of query: 1268
effective length of database: 8,326,068
effective search space: 10557454224
effective search space used: 10557454224
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0019a.6