BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0018.4
(408 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55600 putative protein 39 0.005
At4g13740 unknown protein 38 0.009
At4g10480 putative alpha NAC 36 0.033
At2g31370 bZIP transcription factor PosF21 / AtbZip59 35 0.097
At5g22640 unknown protein 34 0.13
At2g17650 acyl-CoA synthetase like protein 34 0.17
At3g53440 unknown protein 33 0.28
At5g49430 WD-40 repeat protein-like 32 0.48
At5g07910 putative protein 32 0.48
At4g39630 hypothetical protein 32 0.48
At1g01350 unknown protein (At1g01350/F6F3_27) 32 0.48
At3g12390 unknown protein 32 0.63
At3g24080 hypothetical protein 32 0.82
At1g45545 hypothetical protein 32 0.82
At5g17510 glutamine-rich protein 31 1.1
At5g06420 unknown protein 31 1.1
At4g26630 unknown protein 31 1.1
At3g49490 putative protein 31 1.1
At4g39680 unknown protein 31 1.4
At2g39740 hypothetical protein 31 1.4
>At1g55600 putative protein
Length = 485
Score = 38.9 bits (89), Expect = 0.005
Identities = 36/137 (26%), Positives = 62/137 (44%), Gaps = 17/137 (12%)
Query: 258 TRCSTHVPEFELVKMAIGG-LDYSIKKNLVNDEFIDMIQLADKVRRVEKLRLEKYKPEEV 316
T S ++P +E IG L S + LV+D D+I + D E K +E
Sbjct: 178 TEESFYIPSYEPHVDPIGTPLVTSFESELVDDAHTDIISIEDS----ESEDGNKDDDDED 233
Query: 317 FQGEESSCIRATQNSEIGQDEVDQSDEDNDSDENEVNMAEFKPKSPYTYEGENKRKIPAK 376
FQ E+ + Q+ ++ +DE ++ DEDN V + + +P P +R+
Sbjct: 234 FQYEDEDEDQYDQDQDVDEDEEEEKDEDN------VALDDPQPPPP------KRRRYEVS 281
Query: 377 SFRGLKTTSDYQRVMVK 393
+ G TS QR++++
Sbjct: 282 NMIGATRTSKTQRIILQ 298
>At4g13740 unknown protein
Length = 605
Score = 38.1 bits (87), Expect = 0.009
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 80 STMLNPLIQNTQHLTRQLCRIADVFGAPPLNQAFHQVPDYGQSVPLSFTQHEVQNFSQNE 139
S L+P N I V G L QA P++ Q + Q + N
Sbjct: 8 SWSLHPSTNNGSGRANGNININTVPGGGYLPQANPVFPNFNQPIRYPIPQFPANFYRPNF 67
Query: 140 PQNLSQDQNFGPNEVLNGQENSVEKQPHNFDQNLDNNVLVNRNQNDYG-GPQNVANAVEE 198
P + NF P++ LN + PH + + N+ L N NQN + PQ++ N
Sbjct: 68 PDFSLGNPNFQPHQNLNFLHQQI---PHQYG-SAANHFLQNHNQNSFSFPPQSIPNNDIS 123
Query: 199 VLNHHG 204
+ +HG
Sbjct: 124 ISQNHG 129
>At4g10480 putative alpha NAC
Length = 212
Score = 36.2 bits (82), Expect = 0.033
Identities = 19/92 (20%), Positives = 47/92 (50%), Gaps = 1/92 (1%)
Query: 308 LEKYKPEEVFQGEESSCIRATQNSEIGQDEVDQSDEDNDSDENEVNMAEFKPKSPYTYEG 367
+E+ E + + +N + +D D ++D+D D+++ +A+ ++ + +
Sbjct: 6 IEEVNEEALMDAIKEQMKLQKENDVVVEDVKDGDEDDDDVDDDDDEIADGAGENEASKQS 65
Query: 368 ENKRKIPAKSFR-GLKTTSDYQRVMVKRSQNL 398
+++K + G+K +D RV +KRS+N+
Sbjct: 66 RSEKKSRKAMLKLGMKPVTDVSRVTIKRSKNV 97
>At2g31370 bZIP transcription factor PosF21 / AtbZip59
Length = 398
Score = 34.7 bits (78), Expect = 0.097
Identities = 36/158 (22%), Positives = 66/158 (40%), Gaps = 17/158 (10%)
Query: 27 TQFNTLGMTMPLIQSGSLNLFPSNSTTDIDLQSIRQQIDESRYNMVSMLTQQMSTMLNPL 86
T+ TL + L+Q + L N+ + LQ++ QQ+ L +++ L
Sbjct: 238 TEATTLSAQLTLLQRDTNGLTVENNELKLRLQTMEQQVH---------LQDELNEALKEE 288
Query: 87 IQNTQHLTRQLCRIADVFGAPPLN-QAFHQVPDYGQSVPLSFTQHEVQNFSQNEPQNLSQ 145
IQ+ + LT Q+ A +G+ N Q F+ Q++ + ++Q SQ + Q Q
Sbjct: 289 IQHLKVLTGQVAPSALNYGSFGSNQQQFYSNNQSMQTILAAKQFQQLQIHSQKQQQQQQQ 348
Query: 146 DQNFGPNEVLNGQENSVEKQPHNFDQNLDNNVLVNRNQ 183
Q Q+ ++Q + F Q ++ R Q
Sbjct: 349 QQQ-------QHQQQQQQQQQYQFQQQQMQQLMQQRLQ 379
>At5g22640 unknown protein
Length = 871
Score = 34.3 bits (77), Expect = 0.13
Identities = 40/150 (26%), Positives = 65/150 (42%), Gaps = 14/150 (9%)
Query: 221 EVVLQAELPRGGKV---PKVTKFSGDTGESTVEHIARHMETRCSTHVPEFELVKM----- 272
EVV++ E P V K K D E E + E R E ELV+
Sbjct: 564 EVVVKKEHPIKSFVLGIEKSVKPMLDGLEKWTEEKKKAYEERKEMIQQELELVEAEICLE 623
Query: 273 -AIGGLDYSIKKNLVNDEFIDMIQLADKVRRVEKLRLEKYKPEEVFQGEESSCIRATQNS 331
AI +D +KK +E + L ++ E + + YK E+V +E I+ +
Sbjct: 624 EAIEDMDEELKKKEQEEEKKTEMGLTEED---EDVLVPVYKEEKVVTAKEK--IQENKQE 678
Query: 332 EIGQDEVDQSDEDNDSDENEVNMAEFKPKS 361
E +D+ D+ D+D D D+++ + + P S
Sbjct: 679 EKYKDDDDEDDDDGDDDDDDDDDDDLGPSS 708
>At2g17650 acyl-CoA synthetase like protein
Length = 603
Score = 33.9 bits (76), Expect = 0.17
Identities = 20/70 (28%), Positives = 35/70 (49%), Gaps = 4/70 (5%)
Query: 338 VDQSDEDNDSDENEVNMAEFKPKSPYTYEGENKRKIPAKSFRGLKTTSDYQRVMVKRSQN 397
+ QS++D+DSDE+ + + F K + YE E K F +K ++ + + +
Sbjct: 194 ISQSNDDDDSDED--SSSTFASKYSFDYEYETLLKSGDSEFEIIKPRCEWDPISINYTSG 251
Query: 398 LPRTSNPKGI 407
TS PKG+
Sbjct: 252 --TTSRPKGV 259
>At3g53440 unknown protein
Length = 512
Score = 33.1 bits (74), Expect = 0.28
Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 45/179 (25%)
Query: 156 NGQENSVEKQPHNFDQNLDNNVLVNRNQNDYGGPQNVANAVEEVLNHHGFNVGYVNRPNF 215
N + + ++ +N + + ++L +N D G GF++ V PN
Sbjct: 339 NSPKTKIRQRRNNLSKKVVRHLLEKQNHMDQG---------------LGFDLFSVLEPNT 383
Query: 216 TSPFSEVVLQAELPRGGKVPKVTKFSGDTGESTVEHIARHMETRCSTHVPEFELVKMAIG 275
TS F L + +G +PK+ ES V ++ T S V +
Sbjct: 384 TSNF----LSTPMEKGRSLPKIL-------ESPVPCSSKDPTTLVSPPVLK--------- 423
Query: 276 GLDYSIKKNLVNDEFIDMIQLADKVRRVEKLRL---EKYKPEEVFQGEESSCIRATQNS 331
+K +++++ID + + D R+ E RL E +P E+ ++ +RA +++
Sbjct: 424 ----QVKNKALHEKYIDHLHIRDAKRKAESTRLAGKENIRPIEI---QKKDSVRAAKDA 475
>At5g49430 WD-40 repeat protein-like
Length = 1576
Score = 32.3 bits (72), Expect = 0.48
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 289 EFIDMIQLADKVRRVEKLRLEKYK-PEEVFQGEESSCIRATQNSEIGQDEVDQSDEDNDS 347
EFID+++ +V + +Y PEE G+E C+ ++ + E G +S ED+D
Sbjct: 668 EFIDVMEWEPEVDILSDENDSEYNVPEEYSSGKEQECLNSSTSGESGSSS-GESYEDDDH 726
Query: 348 DENEVNMAEFKPKSPYTYEGENKRKIPAKSFRGLK-TTSDYQRVMVKRS 395
+ K K + R++ ++F L+ S+ +R RS
Sbjct: 727 QNSLRRSKRKKHKKEAGIMTSSGRRVKKRNFDELEGAPSNKKRTRKSRS 775
>At5g07910 putative protein
Length = 268
Score = 32.3 bits (72), Expect = 0.48
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 91 QHLTRQLCRIADVFGAPPLNQAFHQVPDYGQSVPLSFTQHEVQNFS-QNEPQNLSQDQNF 149
+ L LC + + N +Q+PD L +QN S N P ++ Q Q
Sbjct: 173 EELPASLCNLIQLKSLSLDNNQVNQIPD-----GLLIHCKSLQNLSLHNNPISMDQFQ-- 225
Query: 150 GPNEVLNGQENSVEKQPHNFDQNLDNNVLVNRNQNDYG 187
++ G ++ E++ FD+ +D+NV++ D G
Sbjct: 226 ----LMEGYQDFEERRKKKFDKQIDSNVMMGSKALDVG 259
>At4g39630 hypothetical protein
Length = 207
Score = 32.3 bits (72), Expect = 0.48
Identities = 21/67 (31%), Positives = 39/67 (57%), Gaps = 4/67 (5%)
Query: 292 DMIQLADKVRRVEK-LRLEKYKPEEVFQGEESSCIRATQNSEIGQDEVDQSDEDNDS--- 347
+ ++L ++ R EK +R+E+ K + V + E + ++N E G+ E+ DE+ DS
Sbjct: 8 ECVKLTEEDRNDEKRIRIEEKKEDFVDEEENLPDLSISRNEETGEIELKWRDENGDSFAG 67
Query: 348 DENEVNM 354
+EN V+M
Sbjct: 68 NENGVDM 74
>At1g01350 unknown protein (At1g01350/F6F3_27)
Length = 343
Score = 32.3 bits (72), Expect = 0.48
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 320 EESSCIRATQNSEIGQDEVDQSDEDNDSDENEVNMAEFKPKSPY 363
EE+ +R + +DE D++D+D+D DEN + A F + P+
Sbjct: 241 EEAEKVRKRNKAMGVEDEDDEADKDSDEDENALPFACFICREPF 284
>At3g12390 unknown protein
Length = 203
Score = 32.0 bits (71), Expect = 0.63
Identities = 20/63 (31%), Positives = 31/63 (48%), Gaps = 2/63 (3%)
Query: 336 DEVDQSDEDNDSDENEVNMAEFKPKSPYTYEGENKRKIPAKSFRGLKTTSDYQRVMVKRS 395
++ D D+D D DE + E KS + + RK K G+K + RV VK+S
Sbjct: 32 EDDDSDDDDKDDDEADGLDGEAGGKSKQSRSEKKSRKAMLKL--GMKPITGVSRVTVKKS 89
Query: 396 QNL 398
+N+
Sbjct: 90 KNI 92
>At3g24080 hypothetical protein
Length = 637
Score = 31.6 bits (70), Expect = 0.82
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 268 ELVKMAIGGLDYSIKKNLVNDEFIDMIQLADKVRRVEKLRLEK----YKPEEVFQGEESS 323
+++K A Y + + +N + D + D + E L L K K +VF
Sbjct: 369 KMMKAAFDDKYYGEEDSDLNSDEDDDGEKPDFDKEDELLGLPKDWDVTKGGDVFAAAREK 428
Query: 324 CIRATQNSEIGQDEVDQSDEDNDSDENEVNMAEFKPKSPYTYEGENKRK 372
++ +N +G DE ++ DE+ + DE E + E K EG+ KRK
Sbjct: 429 VLKHKENM-LGIDEEEEEDEEEEEDEEEEEVDEEKEA-----EGKRKRK 471
>At1g45545 hypothetical protein
Length = 752
Score = 31.6 bits (70), Expect = 0.82
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 213 PNFTSPFSEVVLQAELPRGGKVPKVTKFSGDTGESTVEHIARHMETRCSTHVPEFELVKM 272
P F SP S V++ P V+KF G T + A ++T + EL K+
Sbjct: 144 PRFVSPTSPVLIDTAAPFESVKEAVSKFGGIT-----DWKAHKIQTIERRKTVDQELEKI 198
Query: 273 AIGGLDYSIKKNLVNDEFIDMIQLADKVRR-VEKLRLEKYKPEEVFQGEESSCIRATQNS 331
DY + + + ++ ++ R VE+L+LE K E+ Q +A Q+S
Sbjct: 199 QEDMPDYKKQAVVAEEAKHQVVMELERTRNVVEELKLELEKAEKEEQ-------QAKQDS 251
Query: 332 EIGQDEVDQSDE 343
++ + V++ ++
Sbjct: 252 DLAKLRVEEMEQ 263
>At5g17510 glutamine-rich protein
Length = 369
Score = 31.2 bits (69), Expect = 1.1
Identities = 26/91 (28%), Positives = 36/91 (38%), Gaps = 13/91 (14%)
Query: 137 QNEPQNLSQDQNFGPNEVLNGQENSVEKQPHNFDQNLDNNVLVNRNQNDYGGPQNVANAV 196
QN P N QN PN L Q + ++Q QN+ + ++ + Q Q +
Sbjct: 72 QNRPINPPPQQNPTPNPNLGQQTPNFQQQQ---QQNVSSQQMMQQQQQ-----QQQQQKL 123
Query: 197 EEVLNHHGFNVGY-----VNRPNFTSPFSEV 222
LNH Y V PNF PFS +
Sbjct: 124 MRPLNHIELQCAYQDAWRVCHPNFKQPFSSL 154
>At5g06420 unknown protein
Length = 378
Score = 31.2 bits (69), Expect = 1.1
Identities = 14/44 (31%), Positives = 26/44 (58%)
Query: 320 EESSCIRATQNSEIGQDEVDQSDEDNDSDENEVNMAEFKPKSPY 363
EE+ +R + +D+ D++D+D+D DEN + A F + P+
Sbjct: 276 EEAEKVRKRNKAMGVEDDDDEADKDSDEDENALPFACFICREPF 319
>At4g26630 unknown protein
Length = 763
Score = 31.2 bits (69), Expect = 1.1
Identities = 22/115 (19%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 292 DMIQLADKVRRVEKLRLEKYKPEEVFQGEESSCIRATQNSEIGQDEVDQSDEDNDSDENE 351
+ ++ D+ ++VE + ++ + +E + +E +A + +DE + S+++ND+++ E
Sbjct: 198 EKVENGDENKQVENVEGKEKEDKEENKTKEVEAAKAEVDESKVEDEKEGSEDENDNEKVE 257
Query: 352 VNMAEFKPKSPYTYEGENKRKIPAKSFRGLKTTSDYQRVMVK-RSQNLPRTSNPK 405
A+ K + E++++ S + K TS +V K +++ + + + P+
Sbjct: 258 SKDAKEDEKEETNDDKEDEKEESKGSKKRGKGTSSGGKVREKNKTEEVKKDAEPR 312
>At3g49490 putative protein
Length = 953
Score = 31.2 bits (69), Expect = 1.1
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 275 GGLDYSIKKNLVNDEFIDMIQLADKVRRVEKLRLEKYKPEEVFQG----EESSCIRATQN 330
GGL+ +I+ NL D+ ++ D + + + K EV +E R ++
Sbjct: 752 GGLEQTIRGNLRPDD-ATFAKIPDAIWQETSASTTENKHREVIDRFQILKEQETERKLKS 810
Query: 331 SEIGQDEVDQSDEDNDSDENEVNMAEFKPKSPYTYEGENKRKIPAKSFRGLKTTSDYQRV 390
++ ++D D + E N K P T +G+ + K+ + +SD V
Sbjct: 811 QKLPDSDIDVIDRFQILKQQETNRKLKAQKCPETKKGDQEDKLEGSVMANMGRSSDVSDV 870
Query: 391 M 391
M
Sbjct: 871 M 871
>At4g39680 unknown protein
Length = 633
Score = 30.8 bits (68), Expect = 1.4
Identities = 30/109 (27%), Positives = 47/109 (42%), Gaps = 12/109 (11%)
Query: 271 KMAIGGLDYSIKKNLVNDEFIDMIQLADKVRRVEKLRLEKYKPEEVFQGEESSCIRATQN 330
K ++GG D S N N + I + D EKL L++ +E + E + Q+
Sbjct: 283 KTSVGGGDDS---NAANADMIKENNIID-AGDSEKLNLDRSSGDESMEDEPET----KQS 334
Query: 331 SEIGQDEVDQSDEDNDSDENEVNMAEFKPKSP----YTYEGENKRKIPA 375
I D+ E +E+ +M K KSP + +KRK+PA
Sbjct: 335 ESITSDDKSAKIEMLSKEESRADMDAGKGKSPENKSHPLVASDKRKLPA 383
>At2g39740 hypothetical protein
Length = 474
Score = 30.8 bits (68), Expect = 1.4
Identities = 40/172 (23%), Positives = 69/172 (39%), Gaps = 20/172 (11%)
Query: 67 SRYNMVSMLTQQ--MSTMLNPLIQNTQHLTRQLCRIADVFG-APPLNQAFHQ-------V 116
+R +++ +LT Q ++ + +QH + + ++ G A P NQ Q
Sbjct: 299 NRNSIIGILTGQHIQESLYRTISLPSQHHANGMHNVRNLHGQARPQNQQMQQNWSQSYNT 358
Query: 117 PDYGQSVPLSFTQHEVQNFSQNEPQNL-SQDQNFGPNEVLNGQENSVEKQPHNFDQNLDN 175
P+ PL+ ++ + QN++QN P+NL Q G + Q + +K P+
Sbjct: 359 PNPPHWPPLTQSRPQ-QNWTQNNPRNLQGQPPVQGQTWPVITQTQTQQKSPYKSGNRPLK 417
Query: 176 NVLV--NRNQNDYGGPQNVANAVEEVLNHHGFNVGYVNRPNFTSPFSEVVLQ 225
N ++NQ G P N V Y N N P S++ Q
Sbjct: 418 NTSAGSSQNQGHIGKPSGHMNGVNSA------RPAYTNGVNSARPPSKIPSQ 463
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.312 0.130 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,583,329
Number of Sequences: 26719
Number of extensions: 436292
Number of successful extensions: 1905
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 1814
Number of HSP's gapped (non-prelim): 110
length of query: 408
length of database: 11,318,596
effective HSP length: 102
effective length of query: 306
effective length of database: 8,593,258
effective search space: 2629536948
effective search space used: 2629536948
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Lotus: description of TM0018.4