BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0008.10
(155 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47110 putative ubiquitin extension protein (UBQ6) 305 8e-84
At3g62250 ubiquitin extension protein (UBQ5) 303 2e-83
At1g23410 ubiquitin extension protein, putative 291 7e-80
At5g20620 polyubiquitin 4 UBQ4 150 2e-37
At5g03240 polyubiquitin (ubq3) 150 2e-37
At1g31340 putative ubiquitin (AtRUB1) 150 2e-37
At4g05320 polyubiquitin (ubq10) 150 3e-37
At4g05050 150 3e-37
At4g02890 polyubiquitin 150 3e-37
At3g52590 ubiquitin / ribosomal protein CEP52 150 3e-37
At2g36170 putative ubiquitin/ribosomal protein CEP52 150 3e-37
At1g65350 150 3e-37
At1g55060 ubiquitin-like (UBQ12) 149 6e-37
At5g37640 polyubiquitin 4 149 8e-37
At3g09790 polyubiquitin 137 2e-33
At1g53930 hypothetical protein 112 6e-26
At1g53960 unknown protein 94 4e-20
At1g11980 unknown protein 90 4e-19
At5g42220 unknown protein 64 4e-11
At1g53950 hypothetical protein 62 9e-11
>At2g47110 putative ubiquitin extension protein (UBQ6)
Length = 157
Score = 305 bits (780), Expect = 8e-84
Identities = 149/155 (96%), Positives = 151/155 (97%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYKVD SGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAAA 155
CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK A
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEGA 155
>At3g62250 ubiquitin extension protein (UBQ5)
Length = 157
Score = 303 bits (776), Expect = 2e-83
Identities = 147/152 (96%), Positives = 150/152 (97%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKH+KVKLAVLQFYK+D SGKVQRLRKE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 152
CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQK 152
>At1g23410 ubiquitin extension protein, putative
Length = 156
Score = 291 bits (746), Expect = 7e-80
Identities = 141/153 (92%), Positives = 147/153 (95%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDSGKVQRLRKE 120
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKH H+KVKLAVLQFYKVD SGKVQRL+KE
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120
Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 153
CP+ CG GTFMA+HFDRHYCGKCG TYV++KA
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 153
>At5g20620 polyubiquitin 4 UBQ4
Length = 382
Score = 150 bits (380), Expect = 2e-37
Identities = 76/77 (98%), Positives = 77/77 (99%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 IQKESTLHLVLRLRGGA 77
IQKESTLHLVLRLRGG+
Sbjct: 365 IQKESTLHLVLRLRGGS 381
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g03240 polyubiquitin (ubq3)
Length = 306
Score = 150 bits (380), Expect = 2e-37
Identities = 76/77 (98%), Positives = 77/77 (99%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGGA 77
IQKESTLHLVLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At1g31340 putative ubiquitin (AtRUB1)
Length = 156
Score = 150 bits (380), Expect = 2e-37
Identities = 77/82 (93%), Positives = 78/82 (94%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGGAKKRKK 82
IQKESTLHLVLRLRGG + K
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVK 82
Score = 99.0 bits (245), Expect = 9e-22
Identities = 47/74 (63%), Positives = 59/74 (79%)
Query: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 62
I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 63 KESTLHLVLRLRGG 76
S LHLVL LRGG
Sbjct: 139 GGSVLHLVLALRGG 152
>At4g05320 polyubiquitin (ubq10)
Length = 464
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 67.8 bits (164), Expect = 2e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 34
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05050
Length = 229
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At4g02890 polyubiquitin
Length = 229
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
>At3g52590 ubiquitin / ribosomal protein CEP52
Length = 128
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g36170 putative ubiquitin/ribosomal protein CEP52
Length = 128
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g65350
Length = 294
Score = 150 bits (379), Expect = 3e-37
Identities = 76/76 (100%), Positives = 76/76 (100%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 147 bits (371), Expect = 2e-36
Identities = 75/76 (98%), Positives = 75/76 (98%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE IPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 212 IQKESTLHLVLRLRGG 227
Score = 143 bits (360), Expect = 4e-35
Identities = 75/76 (98%), Positives = 75/76 (98%), Gaps = 1/76 (1%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 136 IQKESTLHLVLRLRGG 151
Score = 100 bits (250), Expect = 2e-22
Identities = 51/53 (96%), Positives = 51/53 (96%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 53
MQIFVKTLTGKTITLEVESS TIDNVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g55060 ubiquitin-like (UBQ12)
Length = 230
Score = 149 bits (376), Expect = 6e-37
Identities = 75/76 (98%), Positives = 76/76 (99%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDN+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 145 bits (365), Expect = 1e-35
Identities = 74/77 (96%), Positives = 75/77 (97%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI PDQQRLIFAGKQ EDGRTLADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 61 IQKESTLHLVLRLRGGA 77
IQKESTLHLVLRLRGG+
Sbjct: 213 IQKESTLHLVLRLRGGS 229
Score = 134 bits (336), Expect = 3e-32
Identities = 66/76 (86%), Positives = 71/76 (92%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIF+KTLTGKT LEVESSDTIDNVKAKIQD EGIPPDQ RLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 61 IQKESTLHLVLRLRGG 76
+Q++STLHL+LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At5g37640 polyubiquitin 4
Length = 322
Score = 149 bits (375), Expect = 8e-37
Identities = 74/76 (97%), Positives = 76/76 (99%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 139 bits (350), Expect = 6e-34
Identities = 71/76 (93%), Positives = 72/76 (94%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFV+TLT KTI LEVESSDT DNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRL GG
Sbjct: 215 IQKESTLHLVLRLCGG 230
Score = 133 bits (335), Expect = 3e-32
Identities = 71/77 (92%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLADY 59
MQIFV TLTGKTITLEVESSDTIDNVKAKIQDKE I PDQQRLIFAG+QLEDG TLADY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 60 NIQKESTLHLVLRLRGG 76
NIQKESTLHLVLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
Score = 117 bits (294), Expect = 2e-27
Identities = 60/76 (78%), Positives = 67/76 (87%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQI KTLT KTIT++V SSDTI+NVKAKIQD EGIP DQQRLIF+GK L+DGRTLADY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 61 IQKESTLHLVLRLRGG 76
IQK+S LHL LRLRGG
Sbjct: 63 IQKDSILHLALRLRGG 78
>At3g09790 polyubiquitin
Length = 631
Score = 137 bits (345), Expect = 2e-33
Identities = 71/76 (93%), Positives = 73/76 (95%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFV+TLTGKTITLEV+SSDTIDNVKAKIQDKEGI P QQRLIFAGKQLEDGRTLADYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRL GG
Sbjct: 139 IQKESTLHLVLRLCGG 154
Score = 128 bits (321), Expect = 1e-30
Identities = 65/76 (85%), Positives = 71/76 (92%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
+QI+ KTLT KTITL+VE+SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TLADYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 61 IQKESTLHLVLRLRGG 76
IQKESTLHLVLRLRGG
Sbjct: 63 IQKESTLHLVLRLRGG 78
Score = 113 bits (282), Expect = 5e-26
Identities = 59/74 (79%), Positives = 64/74 (85%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIF+KTLTGKTI LEVESSDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 61 IQKESTLHLVLRLR 74
I K+STL+LVLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 105 bits (261), Expect = 1e-23
Identities = 54/76 (71%), Positives = 59/76 (77%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
MQIFVK GK ITLEV SSDTI +VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 61 IQKESTLHLVLRLRGG 76
I+ ESTLHL +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 104 bits (259), Expect = 2e-23
Identities = 56/76 (73%), Positives = 64/76 (83%), Gaps = 2/76 (2%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLAD 58
MQIFVKTLT K I LEVES DTI+NVKA +QDKEGI P+ QRLIF GK+L+DG TLAD
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 59 YNIQKESTLHLVLRLR 74
Y+IQKESTLHLVL ++
Sbjct: 379 YSIQKESTLHLVLGMQ 394
Score = 101 bits (251), Expect = 2e-22
Identities = 57/81 (70%), Positives = 60/81 (73%), Gaps = 5/81 (6%)
Query: 1 MQIFVKTL-----TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 55
M IFVK L TG+ LEVESSDTIDNVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 56 LADYNIQKESTLHLVLRLRGG 76
LA YNIQK STL+LV R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
Score = 100 bits (248), Expect = 4e-22
Identities = 55/82 (67%), Positives = 64/82 (77%), Gaps = 7/82 (8%)
Query: 1 MQIFVKTLTGK-----TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 53
MQIFV T +GK T+TL+VESSDTI+NVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 54 RTLADYNIQKESTLHLVLRLRG 75
RTLADY I+ STL L LRLRG
Sbjct: 215 RTLADYGIRNRSTLCLALRLRG 236
Score = 97.8 bits (242), Expect = 2e-21
Identities = 55/83 (66%), Positives = 59/83 (70%), Gaps = 7/83 (8%)
Query: 1 MQIFVKTL-------TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDG 53
MQIFVKT T KTITLEVESSDTIDNVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 54 RTLADYNIQKESTLHLVLRLRGG 76
RTL DYNIQK ST+H + RGG
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGG 551
>At1g53930 hypothetical protein
Length = 158
Score = 112 bits (281), Expect = 6e-26
Identities = 55/73 (75%), Positives = 63/73 (85%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
M IF+KTLTG+ I LEVE+ DTI+N+KAKIQDK+GIP DQQRLIF GKQLEDG TLADYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 61 IQKESTLHLVLRL 73
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g53960 unknown protein
Length = 144
Score = 93.6 bits (231), Expect = 4e-20
Identities = 45/75 (60%), Positives = 58/75 (77%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+ LED + ++DYN
Sbjct: 69 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRVLEDSKAISDYN 128
Query: 61 IQKESTLHLVLRLRG 75
I+ ESTLH+ L G
Sbjct: 129 IKHESTLHITLHQCG 143
>At1g11980 unknown protein
Length = 78
Score = 90.1 bits (222), Expect = 4e-19
Identities = 42/76 (55%), Positives = 57/76 (74%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 61 IQKESTLHLVLRLRGG 76
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220 unknown protein
Length = 879
Score = 63.5 bits (153), Expect = 4e-11
Identities = 28/72 (38%), Positives = 48/72 (65%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D L++Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 61 IQKESTLHLVLR 72
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
>At1g53950 hypothetical protein
Length = 121
Score = 62.4 bits (150), Expect = 9e-11
Identities = 31/67 (46%), Positives = 45/67 (66%)
Query: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
M+IFV T+ KT LEV+ SDTI +K+ I D+ G P DQQ L G +L++ T++DYN
Sbjct: 46 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 105
Query: 61 IQKESTL 67
I+ ++ L
Sbjct: 106 IKPDANL 112
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,401,527
Number of Sequences: 26719
Number of extensions: 134937
Number of successful extensions: 536
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 412
Number of HSP's gapped (non-prelim): 130
length of query: 155
length of database: 11,318,596
effective HSP length: 91
effective length of query: 64
effective length of database: 8,887,167
effective search space: 568778688
effective search space used: 568778688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Lotus: description of TM0008.10