BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0003.6
(1307 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35820 copia-like retrotransposable element 888 0.0
At3g45520 copia-like polyprotein 881 0.0
At2g07550 putative retroelement pol polyprotein 875 0.0
At2g21460 putative retroelement pol polyprotein 857 0.0
At2g13930 putative retroelement pol polyprotein 855 0.0
At1g37110 845 0.0
At4g21360 putative transposable element 795 0.0
At4g10460 putative retrotransposon 782 0.0
At1g48710 hypothetical protein 645 0.0
At3g61330 copia-type polyprotein 639 0.0
At3g59720 copia-type reverse transcriptase-like protein 578 e-165
At2g19840 copia-like retroelement pol polyprotein 569 e-162
At3g60170 putative protein 562 e-160
At1g47360 polyprotein, putative 540 e-153
At4g04280 putative transposon protein 537 e-152
At1g32590 hypothetical protein, 5' partial 529 e-150
At4g03810 putative retrotransposon protein 523 e-148
At2g15650 putative retroelement pol polyprotein 498 e-140
At3g25450 hypothetical protein 488 e-137
At2g05390 putative retroelement pol polyprotein 414 e-115
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 888 bits (2294), Expect = 0.0
Identities = 537/1381 (38%), Positives = 768/1381 (54%), Gaps = 148/1381 (10%)
Query: 7 EVTRFDGTGNFGLWQRMAKDLLAQKSLQKALRDEKPADI--ATVDWN------------- 51
EV +FDG G++ LW+ + L + L +E+ A + +T + +
Sbjct: 7 EVEKFDGDGDYILWKEKLLAHMEMLGLLEGLGEEEEAVVEDSTTEISDGGNQDPETATSK 66
Query: 52 -------EMKEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQR 104
E + KA I L + ++V+ ++ T + L+ L+M+K+ N+++ KQR
Sbjct: 67 LEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPNRIYLKQR 126
Query: 105 LYSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYG 164
LY KM E ++ +V F +++D+ + V V DED+AI+LL SLP +D L TL Y
Sbjct: 127 LYGYKMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKETLKYC 186
Query: 165 KDSITLDSISSTLLPHAQRRQSVEEGGGS------SGEGLFVKGGQDRGRGKGKAVDSGK 218
K ++ L+ I+S + R + E G S + +GLFV QDRGR + + K
Sbjct: 187 KTTLHLEEITSAI------RSKILELGASGKLLKNNSDGLFV---QDRGRSETRGKGPNK 237
Query: 219 KK-RSKSKDRKTTECYSCKQIGHWKRDC-----PNRSGKSGNNSSSANVVQ--SDGSCSE 270
K RSKSK T C+ C + GH+K+ C N+ G + ++ V +D +
Sbjct: 238 NKSRSKSKGAGKT-CWICGKEGHFKKQCYVWKERNKQGSTSERGEASTVTARVTDAAALV 296
Query: 271 EDLLCVSSVKCT-DAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQV 329
+ + T D W+LD+GCS+HMT ++W FK G V +G+D +KG+ V
Sbjct: 297 VSRALLGFAEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDTYSEVKGIGDV 356
Query: 330 KIALDDGGVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAK 389
+I +DG L+ VRY+ E+ KNLISLGTL + G F+S++ IL + K +TV+ K
Sbjct: 357 RIKNEDGSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKG--ILTIFKNDLTVLTGK 414
Query: 390 RTAGNIYKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCII 449
+ + +Y L G T+ G+ ++ + D T LWH RLGH+ +G+ L + L
Sbjct: 415 KES-TLYFLQGTTLAGEANVIDKEKDETSLWHSRLGHIGAKGLQVLVSKGHLD------- 466
Query: 450 GLCKYCVLGKQCRVRFKTGHHKTKGILDYVHSDVRGPTKEP-SV*GFRYFVTFTDDFSRK 508
K + F H TK LDYVHSD+ G T P S+ +YF+TF DDF+R+
Sbjct: 467 ---------KNIMISFGAAKHVTKDKLDYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRR 517
Query: 509 VWVYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHF 568
W+YF++ K E F+KF WK ++ENQ +K+K L +DNG E+ ++ F FC + G+ RH
Sbjct: 518 TWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIRHR 577
Query: 569 SVRKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKV 628
+ TPQQNGVAERMNRT+ K RC+ + L K WA + A +L+N+SP +S++ +
Sbjct: 578 TCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVFLINKSPSSSIEFDI 637
Query: 629 AEEVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVK 688
EE WTG+P D L+ F AY+H D+ KL+P++K I +GY GVK +K+W
Sbjct: 638 PEEKWTGHPPDYKILKKFGSVAYIH---SDQGKLNPRAKKGIFLGYPDGVKRFKVWLLED 694
Query: 689 KKVIVSRDVVFDE*SMLKQSDVTVVPDTEVENSSQDKIQVDIEETPVSPRQIVA--QQQS 746
+K +VSRD+VF E M K+ + S +DK ++E T + + + A + QS
Sbjct: 695 RKCVVSRDIVFQENQMYKELQKN-------DMSEEDKQLTEVERTLIELKNLSADDENQS 747
Query: 747 EPGSDSGEVQ------------------------DYTLVRDREPSRITPPVRYGFED--L 780
E G +S + Q +Y L RDR +I P R+ ED L
Sbjct: 748 EGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRFVEEDDSL 807
Query: 781 AAYAL-LTSSGD---PSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVI 836
+AL +T G+ P TY EAM S E +KW A +EEM+S+KKN+T +++ P GKRVI
Sbjct: 808 VGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVI 867
Query: 837 GCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASM 896
GCKW++K+K + E ++KA LV KG+SQ +GIDY EIFSPVV+H SIR +L++V
Sbjct: 868 GCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQF 927
Query: 897 DMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRF 956
DM LEQ+DVKT FLHGNL+E I + QPEG+ + VC LK+SLYGLKQSPRQW +RF
Sbjct: 928 DMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRF 987
Query: 957 DSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFD 1016
DS+M+ GY+R Y+ CVY L+DGS+I+LLLYVDDMLIA+ + + +LK L +EF+
Sbjct: 988 DSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFE 1047
Query: 1017 MKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSLE 1076
MKDLG A+KILGMEI ++R L LSQ YV GVL F M ++ TPL HFKL
Sbjct: 1048 MKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAA 1107
Query: 1077 QSPKIDSEIEGMSKIPY--AVQLVV*CMLWFALDQIW---------------HKQLVKCQ 1119
+ + E M +PY A+ ++ M+ D + H Q VK
Sbjct: 1108 NEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWV 1167
Query: 1120 VHVQ--AREAALGSSQVDPKILEGYNGSRYHV*QGARCCSISCGICGLCR*SR**KVYNR 1177
+ ++ L + D + GY S Y A I G
Sbjct: 1168 MRYMKGTQDTCLRFKKDDKFEIRGYCDSDY-----ATDLDRRRSITGF------------ 1210
Query: 1178 ICLYSCGG-PICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGGVQLH 1236
+++ GG I WKS +Q VA+STTEAEYMA+AEA KEA+WL GL E+G EQ V++
Sbjct: 1211 --VFTAGGNTISWKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVM 1268
Query: 1237 CDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSD 1296
CDSQSAI L+ N V+H RTKHIDVR+H IRE +A +I + KI T+ N D TK V
Sbjct: 1269 CDSQSAIALSKNSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVS 1328
Query: 1297 K 1297
K
Sbjct: 1329 K 1329
>At3g45520 copia-like polyprotein
Length = 1363
Score = 881 bits (2276), Expect = 0.0
Identities = 526/1365 (38%), Positives = 770/1365 (55%), Gaps = 85/1365 (6%)
Query: 3 GAKFEVTRFDGTGNFGLWQRMAK---DLLA--------------QKSLQKALRDEKPADI 45
GA+ EV +FDG G++ +W+ D+L ++ +K+ DEK
Sbjct: 3 GARIEVEKFDGRGDYTMWKEKLLAHIDMLGLSAVLRESETPMGKERDSEKSDEDEKEERE 62
Query: 46 ATVDWNEMKEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQRL 105
+ E K KA I L VSD V+ I T+ + + L+ LYMSK N+++ KQ+L
Sbjct: 63 KMEAFEEKKRKARSTIVLSVSDRVLRKIKKETSAAAMLEALDRLYMSKALPNRIYLKQKL 122
Query: 106 YSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTY-- 163
YS KM E ++ ++ F +I+AD+ L V V DED+AI+LL SLP +D L TL Y
Sbjct: 123 YSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLKYSS 182
Query: 164 GKDSITLDSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSGKKKRSK 223
GK ++LD +++ + SV++ EGL+VK + RG+ + D GK KRSK
Sbjct: 183 GKTVLSLDEVAAAIYSRELEFGSVKKSIKGQAEGLYVKDKAEN-RGRSEQKDKGKGKRSK 241
Query: 224 SKDRKTTECYSCKQIGHWKRDCPNRS----------------GKSGNNSSSANVVQSDGS 267
SK ++ C+ C + GH K CPN++ GK S N V+S G
Sbjct: 242 SKSKRG--CWICGEDGHLKSTCPNKNKPQFKNQGSNKGESSGGKGNLVEGSVNFVESAGM 299
Query: 268 CSEEDLLCVSSVKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMR 327
E L + + D W++D+GC YHMT REW F G V +G+ +KG+
Sbjct: 300 FVSE-ALSSTDIHLEDEWIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVG 358
Query: 328 QVKIALDDGGVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMR 387
V+I D+G TL VRY+ ++ +NL+SLGT + G+ F+SE +LR+ G ++
Sbjct: 359 TVRIVNDNGLTVTLQNVRYIPDMDRNLLSLGTFEKAGHKFESENG--MLRIKSGNQVLLE 416
Query: 388 AKRTAGNIYKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSC 447
+R +Y L G + +V +D T LWH RL H+S++ M L K+ L +
Sbjct: 417 GRRY-DTLYILHGKPATDESLAVARANDDTVLWHRRLCHMSQKNMSLLIKKGFLDKKKVS 475
Query: 448 IIGLCKYCVLGKQCRVRFKTGHHKTKGILDYVHSDVRG-PTKEPSV*GFRYFVTFTDDFS 506
++ C+ C+ G+ ++ F H TK L+YVHSD+ G PT S+ +YF++F DD++
Sbjct: 476 MLDTCEDCIYGRAKKIGFNLAQHDTKKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYT 535
Query: 507 RKVWVYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQR 566
RKVWVYF+K K E F KF W + VENQ+G ++K LR+DNG E+ ++ F FCEE G QR
Sbjct: 536 RKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQR 595
Query: 567 HFSVRKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDG 626
H + TPQQNGV ERMNRT+ EK R + ++ L K WA + A L+N++P ++++
Sbjct: 596 HRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINF 655
Query: 627 KVAEEVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDP 686
+ ++ W+G S LR + +VH D KL+ ++K ++IGY GVKGYK+W
Sbjct: 656 EFPDKRWSGKAPIYSYLRRYGCVTFVHT---DGGKLNLRAKKGVLIGYPSGVKGYKVWLI 712
Query: 687 VKKKVIVSRDVVFDE*SMLKQ-SDVTVVPDTEVENSSQDKIQVDIE------------ET 733
+KK +VSR+V F E ++ K E ++ + I +D+E +
Sbjct: 713 EEKKCVVSRNVSFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQSQA 772
Query: 734 PVSPRQIVAQQQSEPGSDSGEVQD---------YTLVRDREPSRITPPVRYGFEDLAAYA 784
V+P A + P ++ ++++ Y LVRDRE I P R+ ED A A
Sbjct: 773 QVTPATRGAVTSTPPRYETDDIEETDVHQSPLSYHLVRDRERREIRAPRRFDDEDYYAEA 832
Query: 785 LLTSSG----DPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKW 840
L T+ +P+ Y EA+ DKW AM EE+ES KN+T V P +R+IG +W
Sbjct: 833 LYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIGSRW 892
Query: 841 VYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHL 900
+YK K + E +FKA LV KGY+Q +G+DY EIF+PVV+H SIR++L++VA ++ L
Sbjct: 893 IYKYKQGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQENLEL 952
Query: 901 EQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDSYM 960
EQ+DVKT FLHG L+E+IY+ PEG VC L +SLYGLKQ+PRQW ++F+ YM
Sbjct: 953 EQLDVKTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFNHYM 1012
Query: 961 LRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMKDL 1020
IG++R DYD C Y L D S ++LL YVDDML+AAN++ ++ LK +L +F+MKDL
Sbjct: 1013 TEIGFKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEMKDL 1072
Query: 1021 GAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSLEQSPK 1080
GAAKKILG+EI DR A LWLSQ+SY+ VL F+M ++ TPL H K+ K
Sbjct: 1073 GAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSATEEK 1132
Query: 1081 IDSEIEGMSKIPY--AVQLVV*CMLWFALDQIWHKQLVKCQVHVQAREAALGSSQVDPKI 1138
+ +E E M+ +PY AV ++ M+ D + +V + A+E LG V +
Sbjct: 1133 LSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWV-LRY 1191
Query: 1139 LEGYNGSRYHV*QGARCCSISCGICGLCR*SR**KVYNRICL----YSCGG-PICWKSSV 1193
++G +R + + ICG C + R + ++ GG I WKS +
Sbjct: 1192 IKGTVDTRLCYKRNS-----DFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGL 1246
Query: 1194 QSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGGVQLHCDSQSAIYLTNNQVYHA 1253
Q VA S+TE EYM++ EA KEA+WL GL+K+ G EQ V++ CDSQSAI L+ N V+H
Sbjct: 1247 QRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHE 1306
Query: 1254 RTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKF 1298
RTKHIDV+FH IRE++A ++ + KI T +N D TK + +KF
Sbjct: 1307 RTKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKF 1351
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 875 bits (2261), Expect = 0.0
Identities = 516/1360 (37%), Positives = 758/1360 (54%), Gaps = 84/1360 (6%)
Query: 4 AKFEVTRFDGTGNFGLWQRMAKDLLAQKSLQKALRDEKPA-------DIATVDWNEM--- 53
A+ EV +FDG G++ +W+ + L AL++ + D + D+ E
Sbjct: 4 ARIEVEKFDGRGDYTMWKEKLLAHMDILGLNTALKESESTGEKKSVLDESDEDYEEKLEK 63
Query: 54 -------KEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQRLY 106
K+KA I L V+D V+ I +T + L+ LYMSK N+++ KQ+LY
Sbjct: 64 FEALEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLALDKLYMSKALPNRIYPKQKLY 123
Query: 107 SLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTY--G 164
S KM E ++ ++ F I+ D+ + V + DED+AI+LL +LP ++D L TL Y G
Sbjct: 124 SFKMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLKYSSG 183
Query: 165 KDSITLDSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSGKKKRSKS 224
K +TLD +++ + SV++ EGL+VK D+ KGK GK K K
Sbjct: 184 KSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVK---DKNENKGKGEQKGKGKGKKG 240
Query: 225 KDRKTTECYSCKQIGHWKRDCPNRSG---------KSGNNSSSANVVQSDGSCSEEDLLC 275
K +K C++C + GH++ CPN++ K ++ N+ ++ G E L
Sbjct: 241 KSKKKPGCWTCGEEGHFRSSCPNQNKPQFKQSQVVKGESSGGKGNLAEAAGYYVSE-ALS 299
Query: 276 VSSVKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDD 335
+ V D W+LD+GCSYHMT REWF+ F G V +G+ ++G+ +++ D
Sbjct: 300 STEVHLEDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSD 359
Query: 336 GGVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNI 395
G L+ VRY+ ++ +NL+SLGT + GY F+SE+ ILR+ G ++ +R +
Sbjct: 360 GLTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDG--ILRIKAGNQVLLTGRRY-DTL 416
Query: 396 YKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIGLCKYC 455
Y L + + +V D T LWH RL H+S++ M L ++ L + + +C+ C
Sbjct: 417 YLLNWKPVASESLAVVKRADDTVLWHQRLCHMSQKNMEILVRKGFLDKKKVSSLDVCEDC 476
Query: 456 VLGKQCRVRFKTGHHKTKGILDYVHSDVRGPTKEP-SV*GFRYFVTFTDDFSRKVWVYFM 514
+ GK R F HH TK L+Y+HSD+ G P S+ +YF++ DDF+RKVWVYFM
Sbjct: 477 IYGKAKRKSFSLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFM 536
Query: 515 KYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTP 574
K K E F KF W VENQT R++K LR+DNG E+ +K F FCE GI RH + TP
Sbjct: 537 KTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTP 596
Query: 575 QQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWT 634
QQNGVAERMNRT+ EK R + ++ L K WA + L+N++P ++L+ ++ ++ W+
Sbjct: 597 QQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWS 656
Query: 635 GNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVS 694
GNP S LR + A+VH D KL+P++K ++IGY GVKGYK+W ++K +VS
Sbjct: 657 GNPPVYSYLRRYGCVAFVHT---DDGKLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVS 713
Query: 695 RDVVFDE*SMLK-----QSDVTVVPDTEVEN-------------SSQDKIQVDIEETPVS 736
R+++F E ++ K Q +V+ D + + S D+ V+ P S
Sbjct: 714 RNIIFQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDVISGGDQEMVNTIPAPES 773
Query: 737 PRQIVAQQQSEPGSDSGEVQD----YTLVRDREPSRITPPVRYGFEDLAAYALLTSSG-- 790
P Q + +V Y LVRDR+ I P R+ ED A AL T+
Sbjct: 774 PVVSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRFDDEDYYAEALYTTEDGE 833
Query: 791 --DPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAV 848
+P Y +A DKW AM EE++S +KN T +V P +R+IGC+W++K KL +
Sbjct: 834 AVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIFKYKLGI 893
Query: 849 T*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTT 908
E +FKA LV KGY+Q +GIDY EIF+PVV+H SIRV+L++VA D+ LEQ+DVKT
Sbjct: 894 LGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQLDVKTA 953
Query: 909 FLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRC 968
FLHG L+E+IY+ PEG+ VC L ++LYGLKQ+P+QW ++FD++M I + +
Sbjct: 954 FLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMKEICFVKS 1013
Query: 969 DYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMKDLGAAKKILG 1028
YD C Y L DGS ++LL+YVDD+L+A+ + + LK LG F+MKDLGAAKKILG
Sbjct: 1014 AYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKDLGAAKKILG 1073
Query: 1029 MEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSLEQSPKIDSEIEGM 1088
MEI +DR LWLSQ+ Y+ +L ++M++A TPL HFK K+ + + M
Sbjct: 1074 MEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQAATEQKLIRDEDFM 1133
Query: 1089 SKIPY--AVQLVV*CMLWFALDQIWHKQLVKCQVHVQAREAALGSSQVDPKILEGYNGSR 1146
+PY AV ++ ML D + ++ + +E LG V L G+
Sbjct: 1134 KSVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWV----LRYIKGT- 1188
Query: 1147 YHV*QGARCC---SISCGICGLCR*SR**KVYNRICL----YSCGG-PICWKSSVQSTVA 1198
R C S S I G C + R + ++ GG I WKS +Q VA
Sbjct: 1189 ----LKTRLCYKKSSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRVVA 1244
Query: 1199 MSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGGVQLHCDSQSAIYLTNNQVYHARTKHI 1258
STTE+EYM++ EA KEA+WL GL+K+ G EQ V++ CDSQSAI L+ N V+H RTKHI
Sbjct: 1245 QSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHI 1304
Query: 1259 DVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKF 1298
DV++H IRE+++ + + KI T +N D TK + KF
Sbjct: 1305 DVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKF 1344
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 857 bits (2213), Expect = 0.0
Identities = 526/1347 (39%), Positives = 760/1347 (56%), Gaps = 81/1347 (6%)
Query: 4 AKFEVTRFDGTGNFGLWQRMAKDLLAQKSLQKALRDE-----KPADIATVDWNEMKE--- 55
A+ EV +FDG G++ +W+ L L AL++E K A++ + E +E
Sbjct: 4 ARIEVEKFDGRGDYTMWKEKLMAHLDILGLSVALKEEDDLVEKVAEMQLTEEEEKEEVLR 63
Query: 56 ---------KAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQRLY 106
KA I L V+D V+ I + + L+ LYMSK N+++ KQ+LY
Sbjct: 64 RELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVLDKLYMSKALPNRIYQKQKLY 123
Query: 107 SLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYGKD 166
S KM E ++ ++ F I+AD+ V V DED+AI+LL SLP +D L TL YG
Sbjct: 124 SFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYGLG 183
Query: 167 SITL--DSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQD-RGRGKGKAVDSGKKKRSK 223
+TL D + + + S ++ EGLFVK + RGR + + ++ KK S+
Sbjct: 184 RVTLSLDEVVAAIYSKELELGSNKKSIKGQAEGLFVKEKTETRGRTEQRGNNNNNKK-SR 242
Query: 224 SKDRKTTECYSCKQIGHWKRDCPNRSGKSGNNSSSANVVQSDGSCSEEDLLCVSSVKCTD 283
SK R C+ C G+S N SS N +++G E L + + D
Sbjct: 243 SKSRSKKGCWIC--------------GESSNGSS--NYSEANGLYVSE-ALSSTDIHLED 285
Query: 284 AWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVRTLSQ 343
WV+D+GCSYHMT REWF G V +G+ ++G+ +++ + G V L+
Sbjct: 286 EWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTN 345
Query: 344 VRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKLLGGTI 403
VRY+ E+ +NL+SLGT ++GYSFK E L + G ++ +R +Y L +
Sbjct: 346 VRYIPEMDRNLLSLGTFEKSGYSFKLENGT--LSIIAGDSVLLTVRRCY-TLYLLQWRPV 402
Query: 404 MGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIGLCKYCVLGKQCRV 463
+ SV D T LWH RLGH+S++ M L K+ +L + + C+ C+ GK R+
Sbjct: 403 TEESLSVVKRQDDTILWHRRLGHMSQKNMDLLLKKGLLDKKKVSKLETCEDCIYGKAKRI 462
Query: 464 RFKTGHHKTKGILDYVHSDVRGPTKEP-SV*GFRYFVTFTDDFSRKVWVYFMKYKSEVFA 522
F H T+ L+YVHSD+ G P S+ +YF++F DD++RKV +YF+K K E F
Sbjct: 463 GFNLAQHDTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKDEAFD 522
Query: 523 KFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQNGVAER 582
KF W VENQT ++IK LR+DNG E+ +++F FC + GI H + TPQQNGVAER
Sbjct: 523 KFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNGVAER 582
Query: 583 MNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGNPIDLSN 642
MNRTL EK R + ++ L K WA + L+N++P ++L+ +V ++ W+G S
Sbjct: 583 MNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSPIYSY 642
Query: 643 LRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRDVVFDE* 702
LR F A+VH D KL+P++K I++GY GVKGYK+W +KK +VSR+V+F E
Sbjct: 643 LRRFGCIAFVHT---DDGKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVIFQEN 699
Query: 703 SMLK---QSDVTVVPDTEVENSSQDKIQVDIEE--------------TPVSPRQIVAQQQ 745
+ K QS + E SS + +D EE +P +P Q
Sbjct: 700 ASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEAQSPFNPSPATTQTY 759
Query: 746 SEP-GSDSGEVQD---YTLVRDREPSRITPPVRYGFEDLAAYALLTSSG----DPSTYHE 797
SE S++ +Q Y LVRDR+ I PVR+ ED A AL T+ +P+ Y E
Sbjct: 760 SEGVNSETDIIQSPLSYQLVRDRDRRTIRAPVRFDDEDYLAEALYTTEDSGEIEPADYSE 819
Query: 798 AMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKFK 857
A S +KW AM EEMES KN T +V+ P ++VIG +W+YK KL + E +FK
Sbjct: 820 AKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIYKFKLGIPGVEEGRFK 879
Query: 858 AHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLEEQ 917
A LV KGY+Q KGIDY EIF+PVV+H SIR+++++VA D+ LEQ+DVKT FLHG L+E+
Sbjct: 880 ARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQLDVKTAFLHGELKEK 939
Query: 918 IYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVYVM 977
IY+ PEG+ E VC L +SLYGLKQ+P+QW ++F++YM IG+ R YD C Y+
Sbjct: 940 IYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSEIGFIRSLYDSCAYIK 999
Query: 978 SLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEIHKDRGA 1037
L DGS ++LLLYVDDML+AA + D+++LK +L + FDMKDLGAAK+ILGMEI ++R
Sbjct: 1000 ELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILGMEIIRNREE 1059
Query: 1038 KKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSLEQSPKIDSEIEGMSKIPY--AV 1095
LWLSQ Y+ +L ++M+++ HV TPL H K+ K + + + M IPY AV
Sbjct: 1060 NTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQEQDEDYMKSIPYSSAV 1119
Query: 1096 QLVV*CMLWFALDQIWHKQLVKCQVHVQAREAALGSSQVDPKILEGYNGSRYHV*QGARC 1155
++ M+ D + ++ + ARE LG V + ++G G++ + +
Sbjct: 1120 GSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWV-LRYIKGSLGTKLQYKRSSDF 1178
Query: 1156 CSISCGIC----GLCR*SR**KVYNRICLYSCGGPICWKSSVQSTVAMSTTEAEYMAVAE 1211
+ G C C+ R + + G I WKS Q VA+STTEAEYM++ E
Sbjct: 1179 KVV--GYCDADHAACKDRR--RSITGLVFTLGGSTISWKSGQQRVVALSTTEAEYMSLTE 1234
Query: 1212 AAKEALWLTGLVKELGVEQGGVQLHCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLAS 1271
A KEA+W+ GL+KE G EQ V++ CDSQSAI L+ N V+H RTKHIDVR+ IR+++A+
Sbjct: 1235 AVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERTKHIDVRYQYIRDIIAN 1294
Query: 1272 RQILLQKIHTSENTTDKLTKPVTSDKF 1298
+ KI T +N D TK V +KF
Sbjct: 1295 GDGDVVKIDTEKNPADIFTKIVPVNKF 1321
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 855 bits (2208), Expect = 0.0
Identities = 522/1323 (39%), Positives = 736/1323 (55%), Gaps = 97/1323 (7%)
Query: 41 KPADIATVDWNEMKEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLF 100
K D V E +KA +I L V+D V+ I T + W+ L+ L+M ++ ++++
Sbjct: 33 KKRDADEVARLERCDKAKNVIFLNVADKVLRKIELCKTAAEAWETLDRLFMIRSLPHRVY 92
Query: 101 AKQRLYSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTT 160
+ Y+ KMQE + ++ F I+AD+ L + V DE +AI+LL SLP YD LV T
Sbjct: 93 TQLSFYTFKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVET 152
Query: 161 LTYG--KDSITLDSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSGK 218
+ Y ++ + LD + ++ + + + + EG F +G D G+ +
Sbjct: 153 MKYSNSREKLRLDDV---MVAARDKERELSQNNRPVVEGHFARGRPD-GKNNNQGNKGKN 208
Query: 219 KKRSKSKDRKTTECYSCKQIGHWKRDC-----PNRSGKSGNNSSSANVVQSDGS------ 267
+ RSKS D K C+ C + GH+K+ C N+S + G+++ +++ +S +
Sbjct: 209 RSRSKSADGKRV-CWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLAKSTEAFNPAMV 267
Query: 268 --CSEEDLLCVSSVKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKG 325
++E L+ S+ + WVLD+GCS+HMT ++WF FK GYV +G+D +KG
Sbjct: 268 LLATDETLVVTDSI--ANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKG 325
Query: 326 MRQVKIALDDGGVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTV 385
+ +KI DG L+ VRY+ + +NLISLGTL + G FKS++ IL++ KG T+
Sbjct: 326 IGSIKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDG--ILKIVKGCSTI 383
Query: 386 MRAKRTAGNIYKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVR 445
++ ++ +Y L G T G+ S D T LWH RLGH+S++GM L K+ L+
Sbjct: 384 LKGQKR-DTLYILDGVTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKGCLRREV 442
Query: 446 SCIIGLCKYCVLGKQCRVRFKTGHHKTKGILDYVHSDVRGPTKEPSV*G-FRYFVTFTDD 504
+ C+ CV GKQ RV F H TK L YVHSD+ G P+ G +YF++F DD
Sbjct: 443 IKELEFCEDCVYGKQHRVSFAPAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDD 502
Query: 505 FSRKVWVYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGI 564
+SRKVW+YF++ K E F KF WK VENQ+ RK+K LR+DNG EY + F FC+E GI
Sbjct: 503 YSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGI 562
Query: 565 QRHFSVRKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASL 624
RH + TPQQNG+AER+NRT+ +K R + + + K WA + A YL+NRSP ++
Sbjct: 563 VRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAI 622
Query: 625 DGKVAEEVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLW 684
+ + EE WTG DLS+LR F AY+H D+ KL+P+SK I Y +GVKGYK+W
Sbjct: 623 NFDLPEEKWTGALPDLSSLRKFGCLAYIHA---DQGKLNPRSKKGIFTSYPEGVKGYKVW 679
Query: 685 DPVKKKVIVSRDVVFDE*SMLKQ--------------SDVTVVPD------TEVENSSQD 724
KK ++SR+V+F E M K D+ V PD T+ ++QD
Sbjct: 680 VLEDKKCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQD 739
Query: 725 KI---QVDIEETPVSPRQIVAQQQSEPGSDSGEVQD---YTLVRDREPSRITPPVRYGFE 778
+ PV +Q + DS V+D Y LVRDR I +Y
Sbjct: 740 NSNPSEATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNES 799
Query: 779 DLAAYALLTSSG---DPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRV 835
++ +A + +P +Y EA+ + +KW +AM EEM S+ KN T +LV P ++
Sbjct: 800 NMVGFAYYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPEKVKL 859
Query: 836 IGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVAS 895
IGC+WV+ +K + E +F A LV KG++Q +G+DY+EIFSPVV+H SIR +L++V
Sbjct: 860 IGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVH 919
Query: 896 MDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKR 955
+M L+QMDVKT FLHG LEE+IY+ QPEGF VC LKRSLYGLKQSPRQW R
Sbjct: 920 YNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQWNLR 979
Query: 956 FDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEF 1015
FD +M I Y R YD CVY + ++I+LLLYVDDMLIA+ + +VNELK L +EF
Sbjct: 980 FDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLLSREF 1039
Query: 1016 DMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSL 1075
+MKDLG AKKILGMEI +DR A L LSQ+ YV+ VL F M A VSTPL HFKL
Sbjct: 1040 EMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHFKLKA 1099
Query: 1076 EQSPKIDSEIEGMSKIPYA--VQLVV*CMLWFALDQIW---------------HKQLVKC 1118
+ + + E M +PYA + ++ M+ D + H Q VK
Sbjct: 1100 ATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKW 1159
Query: 1119 QVHVQ--AREAALGSSQVDPKILEGYNGSRYHV*QGARCCSISCGICGLCR*SR**KVYN 1176
+ + L + + +L GY S Y R I G
Sbjct: 1160 VLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTR-----RSITGY----------- 1203
Query: 1177 RICLYSCGG-PICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGGVQL 1235
+++ GG I WKS +Q VA+S+TEAEYMA+ EA KEALWL G ELG Q V++
Sbjct: 1204 ---VFTVGGNTISWKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEV 1260
Query: 1236 HCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTS 1295
H DSQSAI L N V+H RTKHID+R H IR+++ + I + KI T N + TK V
Sbjct: 1261 HSDSQSAITLAKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVPL 1320
Query: 1296 DKF 1298
KF
Sbjct: 1321 AKF 1323
>At1g37110
Length = 1356
Score = 845 bits (2182), Expect = 0.0
Identities = 516/1382 (37%), Positives = 754/1382 (54%), Gaps = 133/1382 (9%)
Query: 5 KFEVTRFDGTGNFGLWQRMAKDLLAQKSLQKALRDEKPADIATVDWNEMK---------- 54
+ E+ F+G +F LW+ + L L+ L D + +E K
Sbjct: 7 RVEIKVFNGDRDFSLWKIRIQAQLGVLGLKDTLTDFSLTKTVPLTKSEAKQESGDGESSG 66
Query: 55 -------------EKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFA 101
E+A +I +SD V+ + T D+W L YM + N+++
Sbjct: 67 TKEVPDPVKIEQSEQAKNIIINHISDVVLLKVNHYATTADLWATLNKKYMETSLPNRIYT 126
Query: 102 KQRLYSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTL 161
+ +LYS KM + +V F I+A++ L + VD+E +AI++L SLP S+ L TL
Sbjct: 127 QLKLYSFKMVSTMTIDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLPASHIQLKHTL 186
Query: 162 TYGKDSITLDSISSTLLPHAQRRQSVEEGGGSSGEGL----------FVKGGQDRGRGKG 211
YG ++T+ ++S+ + R+ E G+ V+ Q G+GKG
Sbjct: 187 KYGNKTLTVQDVTSSA--KSLERELAEAVDLDKGQAAVLYTTERGRPLVRNNQKGGQGKG 244
Query: 212 KAVDSGKKKRSKSKDRKTTECYSCKQIGHWKRDCPNRSGK-SGNNSSSANVVQSDGSCSE 270
RS+S + C+ CK+ GH K+DC +R K A V+ SE
Sbjct: 245 ---------RSRSNSKTKVPCWYCKKEGHVKKDCYSRKKKMESEGQGEAGVITEKLVFSE 295
Query: 271 EDLLCVSSVKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVK 330
L V+ D W+LDSGC+ HMT R+WF SF+ + LGDD +G ++
Sbjct: 296 A--LSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIR 353
Query: 331 IALDDGGVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKR 390
I G ++ L V+YV + +NLIS GTL + GY + E + +R K T +R
Sbjct: 354 IDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGK--VRYFKNNKTALRGSL 411
Query: 391 TAGNIYKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIG 450
+ G +Y L G T+M ++ + ETD T LWH RLGH+S + L + ++ +
Sbjct: 412 SNG-LYVLDGSTVMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINELE 470
Query: 451 LCKYCVLGKQCRVRFKTGHHKTKGILDYVHSDVRG-PTKEPSV*GFRYFVTFTDDFSRKV 509
C++CV+GK +V F G H ++ L YVH+D+ G P PS+ G +YF++ DD +RKV
Sbjct: 471 FCEHCVMGKSKKVSFNVGKHTSEDALSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKV 530
Query: 510 WVYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFS 569
W+YF+K K E F KF WK+ VENQ +K+K LR+DNG E+ + F +C+E+GI+RH +
Sbjct: 531 WLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRT 590
Query: 570 VRKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVA 629
TPQQNGVAERMNRT+ EK RCL + + + WA A YL+NRSP ++++ V
Sbjct: 591 CTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVP 650
Query: 630 EEVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKK 689
EE+W +LR F AYVH +D+ KL P++ +GY G KGYK+W ++
Sbjct: 651 EEMWLNRKPGYKHLRKFGSIAYVH---QDQGKLKPRALKGFFLGYPAGTKGYKVWLLEEE 707
Query: 690 KVIVSRDVVFDE*SMLKQSDVTVVPD-----TEVENSSQDKIQVDIEETPVSPRQIVAQQ 744
K ++SR+VVF E + + D+ V D + E +S + Q E S I Q
Sbjct: 708 KCVISRNVVFQESVVYR--DLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQS 765
Query: 745 QSEP------GSDSGEVQDYT----------------LVRDREPSRITPPVRYGFEDLAA 782
SEP SDS E +Y+ L RDR I PP R+ E
Sbjct: 766 DSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVT 825
Query: 783 YALLTSSG----DPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGC 838
+AL+ +P +Y EAM S + +KW A +EM+SL KN T +LV P +++IGC
Sbjct: 826 FALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGC 885
Query: 839 KWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDM 898
+W++K K + E +FKA LV KGY+Q +G+DY EIF+PVV+H SIR++++LV D+
Sbjct: 886 RWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDL 945
Query: 899 HLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDS 958
LEQMDVKTTFLHG+LEE++Y+EQPEGF VC+LK+SLYGLKQSPRQW KRFD
Sbjct: 946 ELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDR 1005
Query: 959 YMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMK 1018
+M + R ++D CVYV + + FI+LLLYVDDMLIA ++N +K +L EF+MK
Sbjct: 1006 FMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMK 1065
Query: 1019 DLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSL--E 1076
D+G A +ILG++I++DR L LSQ+ Y+ VL RF+MS A + P+ HFKL+ E
Sbjct: 1066 DMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVRE 1125
Query: 1077 QSPKIDSEIEGMSKIPY--AVQLVV*CMLWFALDQIW---------------HKQLVKCQ 1119
+ +D+++ +PY AV ++ ML D + H + VK
Sbjct: 1126 EDECVDTDV-----VPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWV 1180
Query: 1120 VHV--QAREAALGSSQVDPKILEGYNGSRYHV*QGARCCSISCGICGLCR*SR**KVYNR 1177
+ A++ L ++ + GY S Y A I G
Sbjct: 1181 MRYLKGAQDLNLVFTKEKDFTVTGYCDSNY-----AADLDRRRSISGY------------ 1223
Query: 1178 ICLYSCGG-PICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGGVQLH 1236
+++ GG + WK+S+Q VAMSTTEAEY+A+AEAAKEA+W+ GL++++G++Q V++
Sbjct: 1224 --VFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIW 1281
Query: 1237 CDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSD 1296
CDSQSAI L+ N VYH RTKHIDVRF+ IR+++ S + + KIHTS N D LTK + +
Sbjct: 1282 CDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVN 1341
Query: 1297 KF 1298
KF
Sbjct: 1342 KF 1343
>At4g21360 putative transposable element
Length = 1308
Score = 795 bits (2054), Expect = 0.0
Identities = 488/1347 (36%), Positives = 741/1347 (54%), Gaps = 108/1347 (8%)
Query: 5 KFEVTRFDGTGNFGLWQRMAKDLLAQKSLQKALRD------------EKPADIATVDWNE 52
K E+ F+G +F LW+ + L L+ AL D EK + D +
Sbjct: 6 KVEIKTFNGDRDFSLWKIRIEAQLGVLGLKPALSDFTLTKTILVVKSEKKESESEDDETD 65
Query: 53 MK--EKAAGLITLCVSDD----VMNHILDLTTLK--------DVWDKLESLYMSKTPMNK 98
K E+ I SD ++NHI D LK ++W L L+M + N+
Sbjct: 66 SKKTEEVPDPIKFEQSDQAKNFIINHITDTVLLKVQHCVTAAELWATLNKLFMETSLPNR 125
Query: 99 LFAKQRLYSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLV 158
++ + RLYS KM + + + F I+A++ L + V +E +AI++L SLP SY L
Sbjct: 126 IYTQLRLYSFKMVDNLSIDQNTDEFLRIVAELGSLQIQVGEEVQAILILNSLPPSYIQLK 185
Query: 159 TTLTYGKDSITL-DSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSG 217
TL YG ++++ D +SS + + E + L+ +RGR + K
Sbjct: 186 HTLKYGNKTLSVQDVVSSAKSLERELSEQKETIRAPASTALYTA---ERGRPQTKNTQGQ 242
Query: 218 KKKRSKSKDRKTTECYSCKQIGHWKRDCPNRSGKSGNNSSS-ANVVQSDGSCSEEDLLCV 276
K R +S + C+ CK+ GH K+DC K N A V+ SE L +
Sbjct: 243 GKGRGRSNSKSRLTCWFCKKEGHVKKDCYAGKRKLENEGQGKAGVITEKLVYSEA--LSM 300
Query: 277 SSVKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDG 336
+ D WV+DSGC+YHMT +WF+ F + + LGDD KG VK+ G
Sbjct: 301 YDQEAKDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTVESKGSGTVKVNTHGG 360
Query: 337 GVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNIY 396
+R L VR+V + +NLIS GTL + GY + + + +R K T + G +Y
Sbjct: 361 SIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGK--VRFYKENKTALCGNLVNG-LY 417
Query: 397 KLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIGLCKYCV 456
L G T++ + +VE ++ T+LWH RLGH+S M L ++ +L+ + C+ CV
Sbjct: 418 VLDGHTVVNENCNVEGSNEKTELWHCRLGHMSLNNMKILAEKGLLEKKDIKELSFCENCV 477
Query: 457 LGKQCRVRFKTGHHKTKGILDYVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVWVYFMKY 516
+GK ++ F G H T +L Y+H+D+ G +YF++ DD SRKVW+ F+K
Sbjct: 478 MGKSKKLSFNVGKHITDEVLGYIHADLWGK---------QYFLSIIDDKSRKVWLMFLKT 528
Query: 517 KSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQ 576
K E F +F WK VENQ +K+K LR+DNG E+ + F FC++NGI+RH + TPQQ
Sbjct: 529 KDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCKQNGIERHRTCTYTPQQ 588
Query: 577 NGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGN 636
NGVA+RMNRTL EK RCL + L + WA A YLVNRSP +++D V EE+W
Sbjct: 589 NGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSPASAVDHNVPEELWLDK 648
Query: 637 PIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRD 696
+LR F AYVH+ D+ KL P++ + +GY +G KGYK+W ++K ++SR+
Sbjct: 649 KPGYKHLRRFGCIAYVHL---DQGKLKPRALKGVFLGYPQGTKGYKVWLLDEEKCVISRN 705
Query: 697 VVFDE*SMLK------QSDVTVVPDTEVENSSQDKIQ----------VDIEETPVSPRQI 740
+VF+E + K + V + D E N Q ++ V IEE
Sbjct: 706 IVFNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSKTGGVTIEEIDQESDSE 765
Query: 741 VAQQQSEPGSDSGEVQDYTLVRDREPSRITPPVRYGFEDLAAYALLTS----SGDPSTYH 796
+ Q EP S ++ +Y RDRE PP + A AL+ + S +P YH
Sbjct: 766 NSVTQ-EPLIASIDLSNYQSARDRERRAPNPPQKLADYTHFALALVMAEEIESEEPQCYH 824
Query: 797 EAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKF 856
+A KW M EE++SL KN T ++V+ P ++VI C+W++K K + E +++
Sbjct: 825 DAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVISCRWLFKLKPGIPGVEAQRY 884
Query: 857 KAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLEE 916
KA LV +G++Q KGIDY+E+F+PVV+H SIR++++ V DM LEQMDVKTTFLHG L++
Sbjct: 885 KARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKDDMELEQMDVKTTFLHGELDQ 944
Query: 917 QIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVYV 976
+Y+EQPEGF + VC LK+SLYGLKQ+PRQW K+F ++ML + + R ++D CVYV
Sbjct: 945 VLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKFHAFMLSLQFARSEHDSCVYV 1004
Query: 977 MSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEIHKDRG 1036
++ G F++LLLYVDDML+AA ++++LK L +F+MKD+GAA +ILG++I ++R
Sbjct: 1005 KEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFEMKDMGAASRILGIDIIRNRK 1064
Query: 1037 AKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLS--LEQSPKIDSEIEGMSKIPY- 1093
L LSQ YV+ V+ RF M+ A VSTP+ HFKL+ +++ +D E+ +PY
Sbjct: 1065 EGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKLTSLIDEIGSVDPEV-----VPYS 1119
Query: 1094 -AVQLVV*CMLWFALDQIWHKQLVKCQVHVQAREAALGSSQVDPKILEGYNGSRYHV*QG 1152
AV V+ M+ D + LV +R + + ++ ++GY S +
Sbjct: 1120 SAVGSVMYAMIGTIPDVAYAMGLV-------SRFMSRPGANLE---VQGYCDSDH----- 1164
Query: 1153 ARCCSISCGICGLCR*SR**KVYNRICLYSCGG-PICWKSSVQSTVAMSTTEAEYMAVAE 1211
A I G +++ GG + WKSS+Q VA+S+T+AE++A+ E
Sbjct: 1165 AADLDKRRSISGY--------------VFTVGGNTVSWKSSLQHVVALSSTQAEFIALTE 1210
Query: 1212 AAKEALWLTGLVKELGVEQGGVQLHCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLAS 1271
A KEA+W+ GL++++G++ + CDSQSAI L+ N +H RTKH++V+F+ IR+++ +
Sbjct: 1211 AVKEAIWIRGLLEDMGLQPKPATVWCDSQSAICLSKNNAFHDRTKHVEVKFYFIRDIIEA 1270
Query: 1272 RQILLQKIHTSENTTDKLTKPVTSDKF 1298
++ ++KIHTS N D LTK + KF
Sbjct: 1271 GEVKVRKIHTSVNPADMLTKCIPVKKF 1297
>At4g10460 putative retrotransposon
Length = 1230
Score = 782 bits (2020), Expect = 0.0
Identities = 485/1325 (36%), Positives = 708/1325 (52%), Gaps = 140/1325 (10%)
Query: 4 AKFEVTRFDGTGNFGLWQRMAKDLLAQKSLQKALRDEKPADIATVDWNEMKE-------- 55
A+ E+ +FDG G++ LW+ + L ALR+ + E KE
Sbjct: 4 ARVEMEKFDGHGDYTLWKEKLMAHMDLLGLTVALRETQSVSDPLESEEEGKESEKGDKEA 63
Query: 56 -------KAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQRLYSL 108
KA I L VSD V+ T + + L+ LYMSK N+++ KQ+LYS
Sbjct: 64 LMEEKRQKARSTIVLSVSDQVLRKSKKEKTAPSMLEALDKLYMSKALPNRIYLKQKLYSY 123
Query: 109 KMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYGKDSI 168
KMQE ++ ++ F ++AD+ V V DED+AI+LL SLP +D L TL YG
Sbjct: 124 KMQENLSVEGNIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDTLKYGSGRT 183
Query: 169 TL--DSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSGKKKRSKSKD 226
TL D + + + S ++ EGL+VK + RG + + G K RS+S+
Sbjct: 184 TLSVDEVVAAIYSKELELGSNKKSIRGQAEGLYVKDKPET-RGMSEQKEKGNKGRSRSRS 242
Query: 227 RKTTECYSCKQIGHWKRDCPNRS-----GKSGNNSSSANVVQSDGSCSE------EDLLC 275
+ C+ C + GH+K CPN+ GK + S G+ SE + L
Sbjct: 243 KGWKGCWICGEEGHFKTSCPNKGKQQNKGKDQASGSKGEAATIKGNTSEGSGYYVSEALH 302
Query: 276 VSSVKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDD 335
+ V + WV+D+GC+YHMT +EWF G V +G+ +
Sbjct: 303 STDVNLGNEWVMDTGCNYHMTHKKEWFEELSEDAGGTVRMGNKSTSKFR----------- 351
Query: 336 GGVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNI 395
V+Y+ ++ +NL+S+GTL E+GYSF+S+ +L V +G T++ R +
Sbjct: 352 --------VKYIPDMDRNLLSMGTLEEHGYSFESKNG--VLVVKEGTRTLLIGSRHE-KL 400
Query: 396 YKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIGLCKYC 455
Y L G + +VE +D T LWH RLGH+S++ M L K+ L G + + LC+ C
Sbjct: 401 YLLQGKPEVSHSMTVERRNDDTVLWHRRLGHISQKNMDILVKKGYLDGKKVSKLELCEDC 460
Query: 456 VLGKQCRVRFKTGHHKTKGILDYVHSDVRGPTKEP-SV*GFRYFVTFTDDFSRKVWVYFM 514
+ GK R+ F H T+ L+YVHSD+ G P S+ +YF++F D +SRK WVYF+
Sbjct: 461 IYGKARRLSFVVATHNTEDKLNYVHSDLWGAPSVPLSLGKCQYFISFIDVYSRKTWVYFL 520
Query: 515 KYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTP 574
K+K E F F W VENQTGRKIK LR DNG E+ ++ F FC+E GI RH + TP
Sbjct: 521 KHKDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEFCNQQFNDFCKEKGIVRHQTCAYTP 580
Query: 575 QQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWT 634
QQNGVAERMN T+ EK R + + L K WA N L+N++P ++++ +++++ W+
Sbjct: 581 QQNGVAERMNHTIMEKVRRMLSYSGLPKTFWAEATNTVVTLINKTPSSAVNFEISDKRWS 640
Query: 635 GNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVS 694
G + L+ F A+ + D KL P++K + +GY G KGYK+W ++K VS
Sbjct: 641 GKSPVYNYLKRFGCVAFTY---ADEGKLVPRAKKGVFLGYLSGEKGYKVWLLEERKCSVS 697
Query: 695 RDVVFDE*SMLKQSDVTVVPDTEVENSSQDKIQVDIEETPVSPRQIVAQQQSEPGSDSGE 754
R+V F E V + + DS E
Sbjct: 698 RNVTFQE-------------------------------------NAVYRDVMQKNKDSEE 720
Query: 755 VQDYTLVRDREPSRITPPVRYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSAMVEE 814
V + VR I P R+ E Y+ T + S EA+
Sbjct: 721 VDTSSRVR----REIRAPKRFDVE--GYYSEFTDDEEESFNVEAL--------------- 759
Query: 815 MESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYD 874
M+SL KN T +V+ P G+RVIGCKW++K+K E+ +FKA LV+KGY+Q +GIDY
Sbjct: 760 MDSLLKNHTWTVVKKPVGERVIGCKWIFKRKPGTPGIEQPRFKARLVSKGYAQREGIDYT 819
Query: 875 EIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRL 934
+IFSPVV+H SIR++LA+VA + LEQ+DVKT FLHG+LEE+I++E PEG+
Sbjct: 820 DIFSPVVKHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQFKQGE 879
Query: 935 VCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDM 994
VC L +++YGLKQSPR+W ++FDSYML IG+ R + C Y+ SL+DGS ++LL+YVDDM
Sbjct: 880 VCLLNKTMYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDGSKVYLLIYVDDM 939
Query: 995 LIAANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSR 1054
L+AA + ++ELK KL ++F+MKDLGAAK+ILGMEI +DR L LSQ+ Y+ VL
Sbjct: 940 LVAARDMQVISELKQKLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQEDYLSKVLET 999
Query: 1055 FDMSKANHVSTPLTNHFKLSLEQSPKIDSEIEGMSKIPYAVQLVV*CMLWFALDQIWHKQ 1114
+++ + V TPL H K+ ++ S+ E M +PY+ V +++ +D
Sbjct: 1000 YNVDQCKFVVTPLGAHLKMHAATEQQLLSDEEYMKSVPYS--NAVGSIMYSMIDT--RPD 1055
Query: 1115 LVKCQVHVQAREAALGSSQVDPKILEGYNGSRYHV*QGARCCSISCGICGLCR*SR**KV 1174
L C V + + L GY S Y A I G+
Sbjct: 1056 LAYC---VGIISRFMSKPKGADLTLRGYCDSDY-----AANLENRRSISGM--------- 1098
Query: 1175 YNRICLYSCGG-PICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGGV 1233
+++ GG I +S +Q V MS+T+A YM++ EA KEA+WL GL+++ G EQ V
Sbjct: 1099 -----VFTLGGSTINLRSCLQKVVVMSSTKAGYMSLTEAVKEAIWLKGLLQDFGYEQKTV 1153
Query: 1234 QLHCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPV 1293
++ CDSQSAI L+ N V+H RTKHID+++HKIRE++A + ++KI T N+ D TK V
Sbjct: 1154 EIFCDSQSAIALSKNNVHHDRTKHIDIKYHKIREVIADGVVEVKKICTLVNSADIFTKVV 1213
Query: 1294 TSDKF 1298
KF
Sbjct: 1214 PVSKF 1218
>At1g48710 hypothetical protein
Length = 1352
Score = 645 bits (1663), Expect = 0.0
Identities = 425/1315 (32%), Positives = 670/1315 (50%), Gaps = 106/1315 (8%)
Query: 49 DWNEMKEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKL---FAKQRL 105
D + +KA LI + +D +++ T+ K+ W+KL + Y + K+ +
Sbjct: 61 DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120
Query: 106 YSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYGK 165
+L+M+EG + + + ++ R G +DD +L SL ++H+VT + K
Sbjct: 121 EALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETK 180
Query: 166 D--SITLDSISSTLLPHAQRRQSVEE-----------------------GGGSSGEGLFV 200
D ++T++ + +L + ++++ E+ GG G G
Sbjct: 181 DLEAMTIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRG--- 237
Query: 201 KGGQDRGRG----------KGKAVDSGKKK-RSKSK-DRKTTECYSCKQIGHWKRDCPNR 248
+GG GRG +G+ G+ K KS+ D+ + +CY+C + GH+ +C
Sbjct: 238 RGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAP 297
Query: 249 SGKSGNNSSSANVVQSDGSCSEEDLLCVSSVKCTDA-----WVLDSGCSYHMTQHREWFN 303
S K AN V+ EED+L ++S K + W LDSG S HM + F
Sbjct: 298 SNKKFEEK--ANYVEE--KIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFA 353
Query: 304 SFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVRTLSQVRYVLEVMKNLISLGTLHEN 363
G V LGD+ +KG + I L +G + +S V Y+ + N++SLG L E
Sbjct: 354 ELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEK 413
Query: 364 GYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKLLGGTIMGDVASV--ETDDDATKLWH 421
GY + ++N +R + + + + + ++ L I D+A + + LWH
Sbjct: 414 GYDIRLKDNNLSIRDQESNL-ITKVPMSKNRMFVL---NIRNDIAQCLKMCYKEESWLWH 469
Query: 422 MRLGHLSERGMMELHKRNMLKGVRSCIIG---LCKYCVLGKQCRVRF-KTGHHKTKGILD 477
+R GHL+ G+ L ++ M++G+ CI +C+ C+LGKQ ++ F K + + L+
Sbjct: 470 LRFGHLNFGGLELLSRKEMVRGL-PCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLE 528
Query: 478 YVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVWVYFMKYKSEVFAKFKLWKAEVENQTGR 537
+H+DV GP K S+ YF+ F DDFSRK WVYF+K KSEVF FK +KA VE ++G
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGL 588
Query: 538 KIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQNGVAERMNRTLTEKARCLRLN 597
IK +RSD G E+T K F+ +CE+NGI+R +V ++PQQNGVAER NRT+ E AR + +
Sbjct: 589 VIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKS 648
Query: 598 ACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGNPIDLSNLRIFWRPAYVHISSE 657
L K LWA + A YL+NRSP S+ GK +E W+G +S+LR+F A+ H+ E
Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDE 708
Query: 658 DRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRDVVFDE*SML----KQSDVTVV 713
RSKLD KS+ I IGY+ KGYKL++P KK I+SR++VFDE + D
Sbjct: 709 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFF 768
Query: 714 PDTEVENSSQDKIQVDIEETPVSPRQIVAQQQSEPGSDSG----EVQDYTLVRDREPSRI 769
P E + + + EE P + Q E S+ +Q+ V + +
Sbjct: 769 PHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQ---- 824
Query: 770 TPPVRYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQL 829
E+L + L +P + EA+ EK W +AM EE++S++KN+T L L
Sbjct: 825 --------ENLTLFCLFAEC-EPMDFQEAI---EKKTWRNAMDEEIKSIQKNDTWELTSL 872
Query: 830 PHGKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVV 889
P+G + IG KWVYK K E E++KA LV KGY Q GIDYDE+F+PV R ++R++
Sbjct: 873 PNGHKTIGVKWVYKAKKNSK-GEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLI 931
Query: 890 LALVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSP 949
++L A + QMDVK+ FL+G+LEE++YIEQP+G+ G+ V +LK++LYGLKQ+P
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAP 991
Query: 950 RQWYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKT 1009
R W R D Y + +C Y+ +Y+ + + LYVDD++ N+ E K
Sbjct: 992 RAWNTRIDKYFKEKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSMFEEFKK 1050
Query: 1010 KLGKEFDMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTN 1069
++ KEF+M D+G LG+E+ ++ ++++Q+ Y + VL +F M +N V TP+
Sbjct: 1051 EMTKEFEMTDIGLMSYYLGIEVKQEDNG--IFITQEGYAKEVLKKFKMDDSNPVCTPM-- 1106
Query: 1070 HFKLSLEQSPKIDSEIEGMSKIPYAVQLVV*CMLWFAL---DQIWHKQLVKCQVHVQARE 1126
E K+ + EG P + +V + + D ++ +V +
Sbjct: 1107 ------ECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTT 1160
Query: 1127 AALGSSQVDPKILEGYN-GSRYHV*QGARCCSISCGICGLCR*SR**KVYNRICLYSCGG 1185
+ ++ I N G Y + S G R K + Y
Sbjct: 1161 HFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDR--KSTSGFVFYIGDT 1218
Query: 1186 PICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGG-VQLHCDSQSAIY 1244
W S Q V +ST EAEY+A A+WL L+KEL + Q ++ D++SAI
Sbjct: 1219 AFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIA 1278
Query: 1245 LTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKFM 1299
L N V+H R+KHID R+H IRE ++ + + L+ + T + D TKP+ + F+
Sbjct: 1279 LAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFI 1333
>At3g61330 copia-type polyprotein
Length = 1352
Score = 639 bits (1647), Expect = 0.0
Identities = 422/1315 (32%), Positives = 669/1315 (50%), Gaps = 106/1315 (8%)
Query: 49 DWNEMKEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKL---FAKQRL 105
D + +KA LI + +D +++ T+ K+ W+KL + Y + K+ +
Sbjct: 61 DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120
Query: 106 YSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYGK 165
+L+M+EG + + + ++ R G +DD +L SL ++H+VT + K
Sbjct: 121 EALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETK 180
Query: 166 D--SITLDSISSTLLPHAQRRQSVEE-----------------------GGGSSGEGLFV 200
D ++T++ + +L + ++++ E+ GG G G
Sbjct: 181 DLEAMTIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRG--- 237
Query: 201 KGGQDRGRG----------KGKAVDSGKKK-RSKSK-DRKTTECYSCKQIGHWKRDCPNR 248
+GG GRG +G+ G+ K KS+ D+ + +CY+C + GH+ +C
Sbjct: 238 RGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAP 297
Query: 249 SGKSGNNSSSANVVQSDGSCSEEDLLCVSSVKCTDA-----WVLDSGCSYHMTQHREWFN 303
S K A+ V+ EED+L ++S K + W LDSG S HM + F
Sbjct: 298 SNKKFEEK--AHYVEE--KIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFA 353
Query: 304 SFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVRTLSQVRYVLEVMKNLISLGTLHEN 363
G V LGD+ +KG + I L +G + +S V Y+ + N++SLG L E
Sbjct: 354 ELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEK 413
Query: 364 GYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKLLGGTIMGDVASV--ETDDDATKLWH 421
GY + ++N +R + + + + + ++ L I D+A + + LWH
Sbjct: 414 GYDIRLKDNNLSIRDQESNL-ITKVPMSKNRMFVL---NIRNDIAQCLKMCYKEESWLWH 469
Query: 422 MRLGHLSERGMMELHKRNMLKGVRSCIIG---LCKYCVLGKQCRVRF-KTGHHKTKGILD 477
+R GHL+ G+ L ++ M++G+ CI +C+ C+LGKQ ++ F K + + L+
Sbjct: 470 LRFGHLNFGGLELLSRKEMVRGL-PCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLE 528
Query: 478 YVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVWVYFMKYKSEVFAKFKLWKAEVENQTGR 537
+H+DV GP K S+ YF+ F DDFSRK WVYF+K KSEVF FK +KA VE ++G
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGL 588
Query: 538 KIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQNGVAERMNRTLTEKARCLRLN 597
IK +RSD G E+T K F+ +CE+NGI+R +V ++PQQNGV ER NRT+ E AR + +
Sbjct: 589 VIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKS 648
Query: 598 ACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGNPIDLSNLRIFWRPAYVHISSE 657
L K LWA + A YL+NRSP S+ GK +E W+G +S+LR+F A+ H+ E
Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 708
Query: 658 DRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRDVVFDE*SML----KQSDVTVV 713
RSKLD KS+ I IGY+ KGYKL++P KK I+SR++VFDE + D
Sbjct: 709 KRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFF 768
Query: 714 PDTEVENSSQDKIQVDIEETPVSPRQIVAQQQSEPGSDSG----EVQDYTLVRDREPSRI 769
P E + + + EE P + Q E S+ +Q+ V + +
Sbjct: 769 PHFEEDEPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQ---- 824
Query: 770 TPPVRYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQL 829
E+L + L +P + +A+ EK W +AM EE++S++KN+T L L
Sbjct: 825 --------ENLTLFCLFAEC-EPMDFQKAI---EKKTWRNAMDEEIKSIQKNDTWELTSL 872
Query: 830 PHGKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVV 889
P+G + IG KWVYK K E E++KA LV KGYSQ GIDYDE+F+PV R ++R++
Sbjct: 873 PNGHKAIGVKWVYKAKKNSK-GEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLI 931
Query: 890 LALVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSP 949
++L A + QMDVK+ FL+G+LEE++YIEQP+G+ G+ V +LK+ LYGLKQ+P
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 991
Query: 950 RQWYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKT 1009
R W R D Y + +C Y+ +Y+ + + LYVDD++ N+ E K
Sbjct: 992 RAWNTRIDKYFKEKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSIFEEFKK 1050
Query: 1010 KLGKEFDMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTN 1069
++ KEF+M D+G LG+E+ ++ ++++Q+ Y + VL +F + +N V TP+
Sbjct: 1051 EMTKEFEMTDIGLMSYYLGIEVKQEDNG--IFITQEGYAKEVLKKFKIDDSNPVCTPM-- 1106
Query: 1070 HFKLSLEQSPKIDSEIEGMSKIPYAVQLVV*CMLWFAL---DQIWHKQLVKCQVHVQARE 1126
E K+ + EG P + +V + + D ++ +V +
Sbjct: 1107 ------ECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTT 1160
Query: 1127 AALGSSQVDPKILEGYN-GSRYHV*QGARCCSISCGICGLCR*SR**KVYNRICLYSCGG 1185
+ ++ I N G Y + S G R K + Y
Sbjct: 1161 HFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDR--KSTSGFVFYIGDT 1218
Query: 1186 PICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGG-VQLHCDSQSAIY 1244
W S Q V +ST EAEY+A A+WL L+KEL + Q ++ D++SAI
Sbjct: 1219 AFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIA 1278
Query: 1245 LTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKFM 1299
L N V+H R+KHID R+H IRE ++ + + L+ + T + D TKP+ + F+
Sbjct: 1279 LAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFI 1333
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 578 bits (1489), Expect = e-165
Identities = 364/1073 (33%), Positives = 570/1073 (52%), Gaps = 93/1073 (8%)
Query: 49 DWNEMKEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKL---FAKQRL 105
D + +KA LI + +D +++ T+ K+ W+KL + Y + K+ +
Sbjct: 61 DSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEF 120
Query: 106 YSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYGK 165
+L+M+EG + + + ++ R G +DD +L SL ++H+VT + K
Sbjct: 121 EALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETK 180
Query: 166 D--SITLDSISSTLLPHAQRRQSVEE-----------------------GGGSSGEGLFV 200
D ++T++ + +L + ++++ E+ GG G G
Sbjct: 181 DLEAMTIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRG--- 237
Query: 201 KGGQDRGRG----------KGKAVDSGKKK-RSKSK-DRKTTECYSCKQIGHWKRDCPNR 248
+GG GRG +G+ G+ K KS+ D+ + +CY+C + GH+ +C
Sbjct: 238 RGGYGNGRGWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAP 297
Query: 249 SGKSGNNSSSANVVQSDGSCSEEDLLCVSSVKCTDA-----WVLDSGCSYHMTQHREWFN 303
S K AN V+ EED+L ++S K + W LDSG S HM + F
Sbjct: 298 SNKKFKEK--ANYVEE--KIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFA 353
Query: 304 SFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVRTLSQVRYVLEVMKNLISLGTLHEN 363
G V LGD+ +KG + I L +G + +S V Y+ + N++SLG L E
Sbjct: 354 ELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEK 413
Query: 364 GYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKLLGGTIMGDVASV--ETDDDATKLWH 421
GY + ++N +R K + + + + ++ L I D+A + + LWH
Sbjct: 414 GYDIRLKDNNLSIR-DKESNLITKVPMSKNRMFVL---NIRNDIAQCLKMCYKEESWLWH 469
Query: 422 MRLGHLSERGMMELHKRNMLKGVRSCIIG---LCKYCVLGKQCRVRF-KTGHHKTKGILD 477
+R GHL+ G+ L ++ M++G+ CI +C+ C+LG Q ++ F K + + L+
Sbjct: 470 LRFGHLNFGGLELLSRKEMVRGL-PCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLE 528
Query: 478 YVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVWVYFMKYKSEVFAKFKLWKAEVENQTGR 537
+H+DV GP K S+ YF+ F DDFSRK WVYF+K KSEVF FK +KA VE ++G
Sbjct: 529 LIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGL 588
Query: 538 KIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQNGVAERMNRTLTEKARCLRLN 597
IK +RSD+G E+T K F+ +CE+NGI+R +V ++PQQNGVAER NRT+ E AR + +
Sbjct: 589 VIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKS 648
Query: 598 ACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGNPIDLSNLRIFWRPAYVHISSE 657
L K LWA + A YL+NRSP S+ GK +E W+G +S+LR+F A+ H+ E
Sbjct: 649 KRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDE 708
Query: 658 DRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRDVVFDE*S----MLKQSDVTVV 713
R+KLD KS+ I IGY+ KGYKL++P KK I+SR++VFDE + D
Sbjct: 709 KRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFF 768
Query: 714 PDTEVENSSQDKIQVDIEETPVSPRQIVAQQQSEPGSDS----GEVQDYTLVRDREPSRI 769
P E + + + EE P + Q E S+ +Q+ V + +
Sbjct: 769 PHFEEDKPEPTREEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQ---- 824
Query: 770 TPPVRYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQL 829
E+L + L +P + EA+ EK W +AM EE++S++KN+T L L
Sbjct: 825 --------ENLTLFCLFAEC-EPMDFQEAI---EKKTWRNAMDEEIKSIQKNDTWELTSL 872
Query: 830 PHGKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVV 889
P+G + IG KWVYK K + E E++KA LV KGYSQ GIDYDEIF+PV R ++R++
Sbjct: 873 PNGHKAIGVKWVYKAK-KNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLI 931
Query: 890 LALVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSP 949
++L A + QMDVK+ FL+G+LEE++YIEQP+G+ G+ V +LK+ LYGLKQ+P
Sbjct: 932 ISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 991
Query: 950 RQWYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKT 1009
R W R D Y + +C Y+ +Y+ + + LYVDD++ N+ E K
Sbjct: 992 RAWNTRIDKYFKEKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSMFEEFKK 1050
Query: 1010 KLGKEFDMKDLGAAKKILGMEI-HKDRGAKKLWLSQKSYVEGVLSRFDMSKAN 1061
++ KEF+M D+G LG+E+ +D G ++++Q+ Y + VL +F M +N
Sbjct: 1051 EMTKEFEMTDIGLMSYYLGIEVKQEDNG---IFITQEGYAKEVLKKFKMDDSN 1100
Score = 70.9 bits (172), Expect = 5e-12
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 1190 KSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQGG-VQLHCDSQSAIYLTNN 1248
K +V + STT + V A +WL L+KEL + Q ++ D++SAI L N
Sbjct: 1147 KGTVNFGLHYSTTSDYKLVVCHA----IWLRNLLKELSLPQEEPTKIFVDNKSAIALAKN 1202
Query: 1249 QVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKFM 1299
V+H R+KHID R+H IRE ++ + + L+ + T + D TKP+ + F+
Sbjct: 1203 PVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFI 1253
>At2g19840 copia-like retroelement pol polyprotein
Length = 1137
Score = 569 bits (1466), Expect = e-162
Identities = 351/855 (41%), Positives = 478/855 (55%), Gaps = 105/855 (12%)
Query: 502 TDDFSRKVWVYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEE 561
T+D+SRKVWVYF+K K E FA F WK VE Q+ RK+K+LR+DNG E+ + F C++
Sbjct: 318 TNDWSRKVWVYFLKTKDEAFASFTEWKKMVETQSERKLKHLRTDNGLEFCNHKFDEVCKK 377
Query: 562 NGIQRHFSVRKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPR 621
GI RH + TPQQNGVAER+NRT+ K R + + L K WA + A YL+NRSP
Sbjct: 378 EGIVRHRTCTYTPQQNGVAERLNRTIMNKVRSMLSESGLDKKFWAKAASTAVYLINRSPS 437
Query: 622 ASLDGKVAEEVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGY 681
+S++ K+ EE+WT + S L+ F YV+ KLDP++K + +GY GVKG+
Sbjct: 438 SSIENKIPEELWTSAVPNFSGLKRFGCVVYVY---SQEGKLDPRAKKGVFVGYPNGVKGF 494
Query: 682 KLWDPVKKKVIVSRDVVFDE*SMLK----QSDVTV----------VPDTEVE-NSSQDKI 726
++W +++ +SR+VVF E M K QS + +P E N +D+I
Sbjct: 495 RVWMIEEERCSISRNVVFREDVMYKDILNQSTSGMSFDFPLATNRIPSFECAGNRKEDEI 554
Query: 727 QVD-----------IEETPVSPRQIVAQQQSEPGSDSGEVQDYTLVRDREPSRITPPVRY 775
V EE+P+S G +SG+ + Y + RD+ + P +
Sbjct: 555 SVQGGVSDDDTKQSSEESPIST--------GSSGQNSGQ-RTYQIARDKPKRQTKIPDKL 605
Query: 776 G--------FEDLAAYA-LLTSSG---DPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET 823
+++A YA ++T G +P+ Y +A+ + W+ A+ EE+ESL KN T
Sbjct: 606 RDYELNEEVLDEIAGYAYMITEDGGNPEPNDYQKALQDSDYKMWLKAVDEEIESLLKNNT 665
Query: 824 *NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRH 883
LV ++ IGCKWV+K+K + E+ +FKA LV KGYSQ +GIDY EIFSPVV+H
Sbjct: 666 WVLVNRDQFQKPIGCKWVFKRKSGIVGVEKPRFKARLVVKGYSQKEGIDYQEIFSPVVKH 725
Query: 884 TSIRVVLALVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLY 943
SIR++L++V DM L+QMDVKT FLHG L+E IYIEQPEG+ VC LKRSLY
Sbjct: 726 VSIRLLLSMVTHCDMELQQMDVKTAFLHGYLDETIYIEQPEGYVHKRYPDKVCLLKRSLY 785
Query: 944 GLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHD 1003
GL+QSPRQW RF+ +M +IGY R YD CVY L G +I+LLLYVDD+LIA+
Sbjct: 786 GLRQSPRQWNNRFNEFMQKIGYERSKYDSCVYFKELQSGEYIYLLLYVDDILIASRDKRT 845
Query: 1004 VNELKTKLGKEFDMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHV 1063
V +LK L EF+MKDLG AKKILGMEI +DR A + +SQ+ Y+ VL F M +A V
Sbjct: 846 VCDLKALLNSEFEMKDLGDAKKILGMEIVRDRKAGTMSISQEGYLLKVLGNFGMDQAKPV 905
Query: 1064 STPLTNHFKLSLEQSPKIDSEIEGMSKIPY--AVQLVV*CMLWFALDQIWHKQLVKCQV- 1120
TP+ HFKL ++ + E M +PY AV ++ M+ D + H + C+
Sbjct: 906 FTPMGAHFKLKPATDEEVMRQSEVMRAVPYQSAVGSLMYSMIGTRPD-LAHSVGLVCRFM 964
Query: 1121 ------HVQAREAALG--SSQVDPK---------ILEGYNGSRYHV*QGARCCSISCGIC 1163
H QA + L +D K ILEGY S Y + R
Sbjct: 965 SKPLKEHWQAVKWILRYIRGSIDRKLCYKNEGELILEGYCDSDYAADKEGR--------- 1015
Query: 1164 GLCR*SR**KVYNRICLYSCGGPICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLV 1223
+S VA+S+TEAEYMA+ + AKEA+WL G V
Sbjct: 1016 -------------------------RSTSGVKVVALSSTEAEYMALTDGAKEAIWLKGHV 1050
Query: 1224 KELGVEQGGVQLHCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSE 1283
ELG Q V +HCDSQSAI L N VYH RTKHIDV++H IR+L+ + ++ + KI T +
Sbjct: 1051 SELGFVQKTVNIHCDSQSAIALAKNAVYHERTKHIDVKYHFIRDLVNNGEVQVLKIDTED 1110
Query: 1284 NTTDKLTKPVTSDKF 1298
N D TK + KF
Sbjct: 1111 NPADIFTKVLPVSKF 1125
Score = 146 bits (368), Expect = 9e-35
Identities = 94/328 (28%), Positives = 158/328 (47%), Gaps = 30/328 (9%)
Query: 25 KDLLAQKSLQKALRDEKPADIATVDWN--------EMKEKAAGLITLCVSDDVMNHILDL 76
KD L +++ L++E +D A + EKA +I + V D V+ +I +
Sbjct: 4 KDALVERAPLPPLKEEDESDPAKKKQRIEEEKARIDQDEKAMDMIFINVGDKVLRNIENS 63
Query: 77 TTLKDVWDKLESLYMSKTPMNKLFAKQRLYSLKMQEGGDLQAHVYAFNNILADMTRLGVT 136
T + W L+ LY+ K+ N+++ + ++Y+ +MQ+ L+ +V F +++D+ L +
Sbjct: 64 KTAAEAWATLDKLYLVKSLPNRVYLQLKVYNYRMQDSKTLEENVDEFQKMISDLNNLQIQ 123
Query: 137 VDDEDKAIILLCSLPGSYDHLVTTLTYGKDSITLDSISSTLLPHAQRRQSVEEGGGSSGE 196
V DE +AI++L +LP SYD L TL YG++ I LD + S + G GE
Sbjct: 124 VPDEVQAILILSALPDSYDMLKETLKYGREGIKLDDVISAAKSKELELRDSSGGSRPVGE 183
Query: 197 GLFVKGGQDRGRGKGKAVDSGKKKRSKSKDRKTTECYSCKQIGHWKRDCPNRSGKSGNNS 256
GL+V+G G GKK C+ C + GH+KR C K+ N
Sbjct: 184 GLYVRGKSQARGSDGPKSTEGKK-----------VCWICGKEGHFKRQCYKWLEKNKANG 232
Query: 257 SSANVVQSDGSCSEEDL--LCVSSVKCTDA------WVLDSGCSYHMTQHREWFNSFKSG 308
+ + D + +DL L S V ++ W++D+GCS+HMT +E+ F
Sbjct: 233 AGETALVKDDA---QDLVGLVASEVNMSEGKDDQEEWIMDTGCSFHMTPRKEYLMDFVEA 289
Query: 309 DLGYVYLGDDKPCIIKGMRQVKIALDDG 336
G V + ++ +KG+ +VK DG
Sbjct: 290 KSGKVRMANNSFSEVKGIGKVKFIKKDG 317
>At3g60170 putative protein
Length = 1339
Score = 562 bits (1448), Expect = e-160
Identities = 363/1132 (32%), Positives = 577/1132 (50%), Gaps = 89/1132 (7%)
Query: 8 VTRFDGTGNFGLWQRMAKDLLAQKSLQKALRDEKPADI-----------ATVDWNEMKE- 55
+ RFDG +F W ++ L + L + + + PA + + V+ ++K+
Sbjct: 12 IPRFDGYYDF--WSMTMENFLRSRELWRLVEEGIPAIVVGTTPVSEAQRSAVEEAKLKDL 69
Query: 56 KAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKL---FAKQRLYSLKMQE 112
K + + +++ ILD +T K +W+ ++ Y T + + ++ L M+E
Sbjct: 70 KVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFELLAMKE 129
Query: 113 GGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYGKD--SITL 170
G + + ++ M G ++ +L SL ++++V ++ D ++++
Sbjct: 130 GEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDLSTLSI 189
Query: 171 DSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSGKKKRSKSKDRKTT 230
D + +LL H QR G + L V + +G+G+ V G + R + + R T
Sbjct: 190 DELHGSLLVHEQRLN----GHVQEEQALKVTHEERPSQGRGRGVFRGSRGRGRGRGRSGT 245
Query: 231 -----ECYSCKQIGHWKRDCPNRSGKSGNNSSSANVVQSDGSCSEEDLLCVSSVKCTDA- 284
ECY C +GH++ +CP +AN + + EE+LL ++ V+ A
Sbjct: 246 NRAIVECYKCHNLGHFQYECPEWE-------KNANYAELE---EEEELLLMAYVEQNQAN 295
Query: 285 ----WVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVRT 340
W LDSGCS HMT +EWF+ + G V LG+D + G VK+ ++ G +
Sbjct: 296 RDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVN-GVTQV 354
Query: 341 LSQVRYVLEVMKNLISLGTLHENGYSFKSEENR-DILRVSKGAMTVMRAKRTAGNIYKLL 399
+ +V YV E+ NL+SLG L E G + + + SKGA +M + ++ LL
Sbjct: 355 IPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGA--IMETNMSGNRMFFLL 412
Query: 400 GGTIMGDVASVETD---DDATKLWHMRLGHLSERGMMELHKRNMLKG--VRSCIIGLCKY 454
+ ++T+ D LWH R GHL++ G+ L + M+ G + +C
Sbjct: 413 ASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAI 472
Query: 455 CVLGKQCRVRF-KTGHHKTKGILDYVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVWVYF 513
C+ GKQ R K K+ L VHSD+ GP S G RY ++F DDF+RK WVYF
Sbjct: 473 CLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYF 532
Query: 514 MKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKT 573
+ KSE FA FK++KA VE + G + LR+D G E+T F FC +GI R + T
Sbjct: 533 LHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFT 592
Query: 574 PQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVW 633
PQQNGVAER NRT+ R + + K W+ + ++ NRSP A+++G EE W
Sbjct: 593 PQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAW 652
Query: 634 TGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIV 693
+G + R+F YVHI + RSKLD KSK C+ +G ++ K ++L+DPV KK+++
Sbjct: 653 SGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVI 712
Query: 694 SRDVVFDE*SM-------LKQSDVTVVPDTEVENSSQDKIQVDIEETP--------VSPR 738
S+DVVFDE ++ +VT+ E + + + ++ +P VS
Sbjct: 713 SKDVVFDEDKSWDWDQADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSS 772
Query: 739 QIVAQQQSEPGSDSGEVQDYTLVRDREPSRITPPVRYG-----FEDLAAYAL-LTSSGDP 792
I+A P + +V R+R P G E+L+ L + + DP
Sbjct: 773 PILAPSSPAPSPVAAKV-----TRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADP 827
Query: 793 STYHEAMAS*EKDK-WMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*K 851
+ +A+ KDK W AM E+ES+ KN T L LP G IG KWVYK KL
Sbjct: 828 IQFDDAV----KDKIWREAMEHEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNED-G 882
Query: 852 EREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLH 911
E +K+KA LV KGY+Q GIDY E+F+PV R ++R +LA+ + + + Q+DVK+ FLH
Sbjct: 883 EVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLH 942
Query: 912 GNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYD 971
G L+E++Y+ QPEGF G+ V KL+++LYGLKQ+PR WY R ++Y L+ + RC +
Sbjct: 943 GELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSE 1002
Query: 972 CCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEI 1031
++ + G+ + + LYVDD++ + +E K + EF+M DLG K LG+E+
Sbjct: 1003 HTLFTKT-RVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEV 1061
Query: 1032 HKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSL-EQSPKID 1082
+ G +++ Q+ Y VL+RF M ++N V P+ KL+ E K+D
Sbjct: 1062 KQSDGG--IFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDENGEKVD 1111
Score = 95.9 bits (237), Expect = 1e-19
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 1/115 (0%)
Query: 1185 GPICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQ-GGVQLHCDSQSAI 1243
G ICW S Q VA+STTEAEY+A A A + +WL ++++LG E+ ++CD+ S I
Sbjct: 1209 GAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTI 1268
Query: 1244 YLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKF 1298
L+ + V H ++KHI+VRFH +R+L+ + L+ T + D TKP+ ++F
Sbjct: 1269 QLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQF 1323
>At1g47360 polyprotein, putative
Length = 1182
Score = 540 bits (1390), Expect = e-153
Identities = 338/968 (34%), Positives = 516/968 (52%), Gaps = 117/968 (12%)
Query: 11 FDGTGNFGLWQRMAKDLLAQKSLQKALRDEKPADIATVDWNEMKEKAAGLITLCVSDDVM 70
FD +G+F LW+ L+ L+ + + + + + ++K I LC
Sbjct: 9 FDESGDFSLWKTRIMAHLSVIGLKDVVIGKTITPLTAEEEEDPEKK----IELC------ 58
Query: 71 NHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQRLYSLKMQEGGDLQAHVYAFNNILADM 130
T ++ W+ L+ L+M ++ ++++ + Y+ KMQE + ++ F I+AD+
Sbjct: 59 ------QTAQEAWETLDRLFMIRSLPHRVYTQLSFYTFKMQENKKIDENIDDFLKIVADL 112
Query: 131 TRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYG--KDSITLDSISSTLLPHAQRRQSVE 188
L + V DE +AI+LL SLP YD LV T+ Y ++ + LD + ++ + + +
Sbjct: 113 NHLQIEVTDEVQAILLLSSLPARYDGLVETMKYSNSREKLRLDDV---MVGARDKERELS 169
Query: 189 EGGGSSGEGLFVKGGQDRGRGKGKAVDSGKK----KRSKSKDRKTTECYSCKQIGHWKRD 244
+ EG + RGR +GK + G K RSKS D K C+ C + GH+K+
Sbjct: 170 QNNRPVAEGHYA-----RGRPEGKNNNQGNKGKNRSRSKSADGKRV-CWICGKEGHFKKQ 223
Query: 245 C-----PNRSGKSGNNSSSANVVQSDG--------SCSEEDLLCVSSVKCTDAWVLDSGC 291
C N+S + G++ +++ +S + E LL + D W LD+GC
Sbjct: 224 CYKWLERNKSKQQGSDVGESSLAKSSEIFDPAMVIMATGETLLVTG--RDADEWFLDTGC 281
Query: 292 SYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVRTLSQVRYVLEVM 351
S+HMT R+ F FK G+V +G+D +KG+ +KI +DG L+ VRYV +
Sbjct: 282 SFHMTPRRDLFKDFKELSSGFVKMGNDTYSPVKGIGSIKIRNNDGTQVILTDVRYVPNMA 341
Query: 352 KNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKLLGGTIMGDVASVE 411
+NLISLGTL + G FKS++ +L++ KG T+++ ++ +Y L G G+ S
Sbjct: 342 RNLISLGTLEDKGCWFKSQDG--VLKIVKGCSTILKGQKRE-TLYILEGLAENGESHSSA 398
Query: 412 TDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIGLCKYCVLGKQCRVRFKTGHHK 471
D T LWH RLGH+S++GM L K++ L+ + C+ CV GK RV F H
Sbjct: 399 ELKDETSLWHSRLGHMSQKGMEILVKKDCLQRETIKELKFCEDCVYGKNHRVSFAPAQHV 458
Query: 472 TKGILDYVHSDVRGPTKEP-SV*GFRYFVTFTDDFSRKVWVYFMKYKSEVFAKFKLWKAE 530
TK L Y+HSD+ G P S+ +YF++F DD+SRK
Sbjct: 459 TKEKLAYIHSDLWGSPHNPASLGNCQYFISFVDDYSRK---------------------- 496
Query: 531 VENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQNGVAERMNRTLTEK 590
K+K LR+DNG EY + F FC++ GI RH + TPQQNG+AER+NRT+ +K
Sbjct: 497 -------KVKKLRTDNGLEYCNHYFEKFCKDEGIVRHKTCAYTPQQNGIAERLNRTIMDK 549
Query: 591 ARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGNPIDLSNLRIFWRPA 650
R + + + K WA + A YL+NRSP +LD + EE WTG DL LR F
Sbjct: 550 VRSMLSESGMDKKFWAEAASTAVYLINRSPSTALDFDLPEEKWTGALPDLKGLRKFGCLV 609
Query: 651 YVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRDVVFDE*SM---LKQ 707
Y+H D+ KL+P++K + Y +GVKGYK+W +KK ++SR+V+F E M LK
Sbjct: 610 YIH---ADQGKLNPRAKKDVFTSYLEGVKGYKVWVLEEKKCVISRNVIFREEIMYKDLKH 666
Query: 708 SDVTVVPDTEVEN------------------------SSQDKIQVDIEETPVSPRQIVAQ 743
T + + ++EN + QD D ++ Q+ +
Sbjct: 667 DSHTSMIENDLENIRLNPPVVTCDHEITDQGGATVTDTYQDDSAQDANSPVITQTQVSNE 726
Query: 744 QQSEPGSDSGEVQDYTLVRDREPSRITPPVRYGFEDLAAYALLTSSG---DPSTYHEAMA 800
QS+ S+ ++ DY LVRDR +I P RY +L ++ T G +P++Y A+
Sbjct: 727 NQSK--SEEEDLSDYQLVRDR-AVKINP--RYNESNLVGFSFFTEDGEQAEPNSYQAALR 781
Query: 801 S*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKFKAHL 860
E DKW AM EEM S+ KN+T +LV+ P G ++IGC+W++ +K + E ++KA L
Sbjct: 782 DPEWDKWNEAMKEEMMSMGKNQTLDLVEKPEGVKIIGCRWIFTRKTGIQGVEAPRYKARL 841
Query: 861 VTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLEEQIYI 920
V KG++Q +GIDY EIFSPVV+H SIR ++++VA DM L+QMDVKT FLHG L+E IY+
Sbjct: 842 VAKGFTQKEGIDYTEIFSPVVKHVSIRYIVSMVAHFDMELQQMDVKTAFLHGFLDEDIYM 901
Query: 921 EQPEGFSE 928
QPEGF +
Sbjct: 902 AQPEGFED 909
Score = 130 bits (328), Expect = 4e-30
Identities = 98/274 (35%), Positives = 136/274 (48%), Gaps = 39/274 (14%)
Query: 1044 QKSYVEGVLSRFDMSKANHVSTPLTNHFKLSLEQSPKIDSEIEGMSKIPYA--VQLVV*C 1101
+++YV+ VL M ++ VSTP+ HFKL + ++ E M +PYA V ++
Sbjct: 915 KEAYVKKVLRSTHMDQSKPVSTPIGVHFKLRAATEEEYKNQFERMRFVPYANTVGSIMYS 974
Query: 1102 M------LWFALDQIWHKQLVKCQVHVQAREAAL----GSS-------QVDPKILEGYNG 1144
M L + LD I + H QA + L G+ + D +L GY
Sbjct: 975 MIGTRPDLAYPLDVISRFMSKPLKDHWQAAKWVLRYMKGTETKKLCYMKQDDFLLRGYCD 1034
Query: 1145 SRYHV*QGARCCSISCGICGLCR*SR**KVYNRICLYSCGG-PICWKSSVQSTVAMSTTE 1203
S Y R I G +++ GG I WKS +Q VA+STTE
Sbjct: 1035 SDYGSNFDTRR-----SISGY--------------VFTIGGNTIIWKSKLQKVVALSTTE 1075
Query: 1204 AEYMAVAEAAKEALWLTGLVKELGVEQGGVQLHCDSQSAIYLTNNQVYHARTKHIDVRFH 1263
+EYMA+ EA KEALWL GL ELG Q V++HCDSQS I L N V+H TKHID+ H
Sbjct: 1076 SEYMALTEAVKEALWLKGLANELGFPQKDVEVHCDSQSVIALAKNSVHHENTKHIDIMLH 1135
Query: 1264 KIRELLASRQILLQKIHTSENTTDKLTKPVTSDK 1297
+R+++ +I L KI + NT D TK + +K
Sbjct: 1136 FVRDVITEGKIRLVKIASECNTADIFTKVLLVNK 1169
>At4g04280 putative transposon protein
Length = 1104
Score = 537 bits (1383), Expect = e-152
Identities = 407/1327 (30%), Positives = 614/1327 (45%), Gaps = 268/1327 (20%)
Query: 5 KFEVTRFDGTGNFGLWQRMAKDLLAQKSLQKALRDEKPADIATVDWNEMKEK-----AAG 59
K E+ F+G +F W+ + L L+ +L D K V E KE A+
Sbjct: 2 KVEIKTFNGDRDFSFWKIRIEAQLGVLGLKNSLTDFKLTKTVPVAKKEEKESEYEDDASD 61
Query: 60 LITLCVSDD-------------VMNHILDLTTLK--------DVWDKLESLYMSKTPMNK 98
+ D ++NHI D LK ++W L L+M + +N+
Sbjct: 62 IKQATEEPDPIKFEQSEQAKNFIINHITDTVLLKVQHCKTAAEIWATLNKLFMETSLLNR 121
Query: 99 LFAKQRLYSLKMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLV 158
++ + +LYS KM + + +V F ILAD + LP SY L
Sbjct: 122 IYTQLKLYSFKMVDTLSIDQNVDEFLRILADCLDQNL--------------LPSSYIQL- 166
Query: 159 TTLTYGKDSITLDSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSGK 218
K ++ D +SS + ++ E S G+ + R + K
Sbjct: 167 ------KHTLNTDVVSSAKSLERKLSETQESNKNVSMALYTTDRGRPQVRNQDKQGQGKN 220
Query: 219 KKRSKSKDRKTTECYSCKQIGHWKRDCPNRSGKSGNNSSSANVVQSDGSCSEEDLLCVSS 278
+ RS SK R T C+ CK+ H KRDC R K N + +
Sbjct: 221 RGRSNSKTRVT--CWFCKKEAHVKRDCFARKKKLENENRAT------------------- 259
Query: 279 VKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGV 338
+ LGDD +G +K+ G +
Sbjct: 260 ---------------------------------MILLGDDHTVESRGCGTIKLNTHGGLI 286
Query: 339 RTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKL 398
R L VRYV + +NLIS GTLH GY + E + LR K T + G +Y L
Sbjct: 287 RMLKNVRYVPNLRRNLISTGTLHSLGYKHEGGEGK--LRFYKNGKTALCGYLMNG-LYIL 343
Query: 399 LGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIGLCKYCVLG 458
G T+ + + E+ ++TKL L ++ K + C++ V+G
Sbjct: 344 DGHTVATETCNAESAKNSTKL---------------LIEKKEFKD-----LDFCEHYVMG 383
Query: 459 KQCRVRFKTGHHKTKGILDYVHSDVRG-PTKEPSV*GFRYFVTFTDDFSRKVWVYFMKYK 517
K ++ F G H T+ IL YVH+D+ G P PS+ G +YF++ DD SRKVW+ F+K K
Sbjct: 384 KSKKLSFNVGKHVTEDILGYVHADLWGSPNVTPSISGKQYFLSIIDDKSRKVWLMFLKSK 443
Query: 518 SEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQN 577
E F KF WK VEN G+K+K LR+DNG E+ + F +C + GI+RH + TPQQN
Sbjct: 444 DETFDKFCEWKEIVENHVGKKVKTLRTDNGLEFCNNRFNDYCAKTGIERHRTCTYTPQQN 503
Query: 578 GVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGNP 637
GV +RMNRT+ EK R SP +++D V E++W
Sbjct: 504 GVTKRMNRTIMEKVR--------------------------SPASAVDHNVPEQLWLNRE 537
Query: 638 IDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRDV 697
+LR F AYVH +++ KL P+ + +GY +G KGYK+W ++K ++SR+V
Sbjct: 538 PGYKHLRRFSSIAYVH---QEQGKLKPRVLKGVFLGYPQGTKGYKVWLIDEEKCVISRNV 594
Query: 698 VFDE*SMLKQSDVTVVPDTEVENSSQDKIQVDIEETPVSPRQIVAQQQSEPGSDSGEVQD 757
VF+E S+ K D+ E E +Q+ Q++IE P S ++ Q Q + G+ ++ D
Sbjct: 595 VFNEDSVFK--DLQSGSKDEDETVTQES-QIEIETPPKS--ELETQNQVQGGATQVQLND 649
Query: 758 YTLVRDREPSRITPPVRYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSAMVEEMES 817
+ E + + GF A S +P +H+ + +KW M+EEM+S
Sbjct: 650 ----SEDEYNDVE-----GFAFALVMAEEVESEEPVCFHDVKEDKDWEKWHGGMIEEMDS 700
Query: 818 LKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIF 877
L KN T ++V P ++VI C W+YKKKL + E ++KA LV +G+S +GIDY E+F
Sbjct: 701 LLKNATWDIVDKPKNQKVISCHWLYKKKLGIPGVELPRYKARLVARGFSHREGIDYQEVF 760
Query: 878 SPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCK 937
SPVV+HTSIR++L+L+ DM LEQMDVKT FLHG L++ +++EQPEGF
Sbjct: 761 SPVVKHTSIRILLSLMVKEDMELEQMDVKTAFLHGELDQTLFMEQPEGF----------- 809
Query: 938 LKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIA 997
++PRQW KRF+++M+ + R D CVYV + +
Sbjct: 810 ---------EAPRQWNKRFNAFMMDQKFSRSVSDSCVYVKEVSN---------------- 844
Query: 998 ANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDM 1057
A + ++ +LK L +EF+MKD+GAA + LG++I ++R L LSQ SY+E V+ +F M
Sbjct: 845 AKSMTEIKKLKKVLSREFEMKDMGAASRKLGIDIIRNRSEGTLCLSQTSYLERVIQKFRM 904
Query: 1058 SKANHVSTPLTNHFKLSLEQSPKIDSEIEGMSKIPYAVQLVV*CMLWFALDQIWHKQLVK 1117
A V+TP+ HFKLS S D E G K+PY+ VV +++ + H VK
Sbjct: 905 DGAKVVNTPIGAHFKLS---SVHNDDERVGSEKVPYS--SVVGSLMFMSKQGEVHWTAVK 959
Query: 1118 CQVHVQAREAALG---SSQVDPKILEGYNGSRYHV*QGARCCSISCGICGLCR*SR**KV 1174
+ L + D K+ +GY S + A + I G
Sbjct: 960 WLLRYLKWSIGLNLMYTKGFDFKV-QGYCDSDH-----AADLDKNMSISGY--------- 1004
Query: 1175 YNRICLYSCGGPI-CWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKE--LGVEQG 1231
+++ GG I WKS +Q VA+STTEAEY+A+ +A KEA+W+ L+ + LG E
Sbjct: 1005 -----VFTVGGNIVSWKSCLQPVVALSTTEAEYIALTKAVKEAMWIRNLLDDMMLGTETA 1059
Query: 1232 GVQLHCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTK 1291
V +++ + ++ + KIHT+ N D LTK
Sbjct: 1060 EV---------------------------------DIIEAGEVEVHKIHTTRNPADMLTK 1086
Query: 1292 PVTSDKF 1298
+ KF
Sbjct: 1087 GIPVSKF 1093
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 529 bits (1362), Expect = e-150
Identities = 334/1059 (31%), Positives = 534/1059 (49%), Gaps = 63/1059 (5%)
Query: 56 KAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQRLYS---LKMQE 112
K + + ++ IL T KD+W+ ++ Y + ++ S L+M+
Sbjct: 27 KVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLEMKI 86
Query: 113 GGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTLTYGKD--SITL 170
G + + I DM LG + D +L +L + ++V + + +T+
Sbjct: 87 GETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKELTV 146
Query: 171 DSISSTLLPHAQR--RQSVEEGGGSSGEGLFVKGGQDRG----RGKGKAVDSGKKKRSKS 224
D + S+L+ H Q R VEE + GG+ RG RG+G+ G+ + +
Sbjct: 147 DGLQSSLMVHEQNLSRHDVEERVLKAETQWRPDGGRGRGGSPSRGRGRGGYQGRGRGYVN 206
Query: 225 KDRKTTECYSCKQIGHWKRDCPNRSGKSGNNSSSANVVQSDGSCSEEDLLCVSSVKCT-- 282
+D T EC+ C ++GH+K +CP+ AN V+ EEDLL ++ V+
Sbjct: 207 RD--TVECFKCHKMGHYKAECPSWE-------KEANYVEM-----EEDLLLMAHVEQIGD 252
Query: 283 ---DAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVR 339
W LDSGCS HM REWF SG V LGDD+ ++G ++++ +D G ++
Sbjct: 253 EEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVD-GRIQ 311
Query: 340 TLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKLL 399
+S V +V + NL S+G L + G F E + + VM + T ++ +
Sbjct: 312 VISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVF 371
Query: 400 GGTIMG----DVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIG----L 451
+ ++ A +WH R GHL+ +G+ L ++ M+KG+ +G +
Sbjct: 372 AAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAV 431
Query: 452 CKYCVLGKQCRVRF-KTGHHKTKGILDYVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVW 510
C C+ GKQ R K K+ +L VH+D+ GP S G RY + F DDFSRK W
Sbjct: 432 CDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCW 491
Query: 511 VYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSV 570
Y + KSE F FK +KAEVE ++G+K+ LRSD G EY + F +C+E GI+R +
Sbjct: 492 TYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTA 551
Query: 571 RKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAE 630
TPQQNGVAER NR++ RC+ + + + W + A Y++NRSP +L+ E
Sbjct: 552 AYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPE 611
Query: 631 EVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKK 690
E W+ + +LRIF AY + + R KLD KS C++ G +K K Y+L+DP K
Sbjct: 612 EKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGK 671
Query: 691 VIVSRDVVFDE*SMLKQSDVTVVPDTEVENSSQDKI-----------QVDIEETPVSPRQ 739
+++SRDV FDE + D ++ + +NS + Q D EET
Sbjct: 672 ILISRDVQFDEERGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEET 731
Query: 740 IV-AQQQSEPGSDSGEV---QDYTLVRDREPSRITPPVRYGFEDLAAYALLTSSGDPSTY 795
+ Q+ P +G V Q ++D + ED AL DP +
Sbjct: 732 VAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNARVLITQDEED-EVLALFIGPDDPVCF 790
Query: 796 HEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREK 855
EA + + W AM E+ S+++N T LV+LP +VIG KW++K K E +K
Sbjct: 791 EEAA---QLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEK-GEVDK 846
Query: 856 FKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLE 915
FKA LV KGY Q G+D+ E+F+PV + +IR++L L A + Q+DVK+ FLHG+L+
Sbjct: 847 FKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLK 906
Query: 916 EQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVY 975
E +++EQP+GF + V KLK++LYGLKQ+PR WY R + + + G+ +C + ++
Sbjct: 907 EDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLF 966
Query: 976 VMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEIHKDR 1035
V + F+ + +YVDD++ + + + K + +EF M DLG K LG+E+ +D
Sbjct: 967 VKK-ERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDE 1025
Query: 1036 GAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLS 1074
+ ++++Q+ Y ++ ++ M N V P+ KL+
Sbjct: 1026 --RGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLT 1062
Score = 94.7 bits (234), Expect = 3e-19
Identities = 48/116 (41%), Positives = 70/116 (59%), Gaps = 1/116 (0%)
Query: 1184 GGPICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVEQ-GGVQLHCDSQSA 1242
GG I W S Q V +STTEAE+++ + A +A+WL +++E+G Q GG + CD+ S
Sbjct: 1134 GGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSST 1193
Query: 1243 IYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKF 1298
I L+ N V H R+KHI VR+H +REL+ I L T++ D +TK V + F
Sbjct: 1194 IKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAVKREVF 1249
>At4g03810 putative retrotransposon protein
Length = 964
Score = 523 bits (1348), Expect = e-148
Identities = 353/988 (35%), Positives = 502/988 (50%), Gaps = 68/988 (6%)
Query: 338 VRTLSQVRYVLEVMKNLISLGTLHENGYSFK------SEENRDILRVSKGAMTVMRAKRT 391
V L YV + KN+IS+ L G+ F S + D+ S +
Sbjct: 2 VLELKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVLNQ 61
Query: 392 AGNIYKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIGL 451
+ IY + + D + T LWH RLGH++E+ + +LH +L
Sbjct: 62 SMPIYNIRTKKFKSN------DLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYET 115
Query: 452 CKYCVLGKQCRVRFKTGH-HKTKGILDYVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVW 510
C+ C+LGK + F TGH + +L +H+DV GP + ++YF+TFTDDFSR +
Sbjct: 116 CESCLLGKMTKAPF-TGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGY 174
Query: 511 VYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSV 570
VY MK+KS+ F FK ++ EV+NQ G+ IK LRSD G EY + F E GI +
Sbjct: 175 VYLMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTP 234
Query: 571 RKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAE 630
TPQ NGV+ER NRTL + R + + L W + + +++NR P S++ K
Sbjct: 235 PGTPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVE-KTPY 293
Query: 631 EVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKK 690
E+WTG +LS L+I+ +Y D KL PKS C +GY K KGY + P K
Sbjct: 294 EIWTGKVPNLSFLKIWGCESYAKRLITD--KLGPKSDKCYFVGYPKETKGYYFYHPTDNK 351
Query: 691 VIVSRDVVFDE*SMLKQSDVTVVPDTEVENSSQDKIQVDIEETPVSPRQIVAQQQSEPGS 750
V V R+ F E L + E Q + EE + R++V EP
Sbjct: 352 VFVVRNGAFLEREFLSKGTSGSKVLLEEVREPQGDVPTSQEEHQLDLRRVVEPILVEP-- 409
Query: 751 DSGEVQDYTLVRDREPSRITPPVRYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSA 810
EV+ R EP R V +D A + + S +P++Y EA+ + DKW+ A
Sbjct: 410 ---EVRRSERSR-HEPDRFRDWV---MDDHALF--MIESDEPTSYEEALMGPDSDKWLEA 460
Query: 811 MVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKG 870
EMES+ +N+ LV LP G + I CKW++KKK+ + + +KA LV KGY Q G
Sbjct: 461 AKSEMESMSQNKVWTLVDLPDGVKPIECKWIFKKKIDMD-GNIQIYKAGLVAKGYKQVHG 519
Query: 871 IDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETG 930
IDYDE +SPV SIR++LA A D + QMDVKT FL+GNLEE +Y+ QPEGF+
Sbjct: 520 IDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPE 579
Query: 931 DGRLVCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLY 990
R VCKL RS+YGLKQ+ R W RF+ + + R + + CVY + FL+LY
Sbjct: 580 AARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDFIRNEEEPCVY-KKTSGSAVAFLVLY 638
Query: 991 VDDMLIAANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEG 1050
VDD+L+ N + + +KT LG F MKD+G A ILG+ I++DR K + LSQ +Y++
Sbjct: 639 VDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDK 698
Query: 1051 VLSRFDMSKANHVSTPLTNHFKLSLEQSPKIDSEIEGMSKIPY--AVQLVV*CMLWFALD 1108
VL RF+M + P+++ LS Q P E E MSKIPY A+ ++ ML+ D
Sbjct: 699 VLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPD 758
Query: 1109 QIWHKQLVKCQVHVQAR-EAALGSS-------------QVDPKILEGYNGSRYHV*QGAR 1154
V C + + +R ++ G S + K L Y GS V G
Sbjct: 759 -------VACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLV-YGGSEELVVSGYT 810
Query: 1155 CCSISCGICGLCR*SR**KVYNRICLYSC--GGPICWKSSVQSTVAMSTTEAEYMAVAEA 1212
S ++ + C GG + WKS+ QSTVA STTEAEY+A +EA
Sbjct: 811 DASFQTDKDDF---------RSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEA 861
Query: 1213 AKEALWLTGLVKELGVE---QGGVQLHCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELL 1269
AKE +W+ + ELGV G + L+CD+ AI H ++KHI R+H IRE++
Sbjct: 862 AKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREII 921
Query: 1270 ASRQILLQKIHTSENTTDKLTKPVTSDK 1297
+ + ++ T N D TKP+ K
Sbjct: 922 DRGDVKISRVSTDANVADHFTKPLPQPK 949
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 498 bits (1281), Expect = e-140
Identities = 350/1077 (32%), Positives = 536/1077 (49%), Gaps = 106/1077 (9%)
Query: 57 AAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMN--KLFAKQRLY-SLKMQEG 113
A ++ V+D + + I ++ K+ WD L+ Y + KL + +R Y +LKM +
Sbjct: 71 ALQILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMYDN 130
Query: 114 GDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGSYDHLVTTL--TYGKDSITLD 171
+++ + +T G + +L SLP +D +V+ L T D++T+
Sbjct: 131 DNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALTMS 190
Query: 172 SISSTLLPHAQRRQSVEEGGGSSGEGLFV------------------------------- 200
+ L R + EE S+ EG F
Sbjct: 191 ELLGILKAQEARVTAREE---STKEGAFYVRSKGRESGFKQDNTNNRVNQDKKWCGFHKS 247
Query: 201 -KGGQDRGRGKGKAVDSGKKKRSKSKDRKTTECYSCKQIGHWKRDCPNRSGKSGNNSSSA 259
K ++ R K K D GK KRS K CY C +IGH+ +C +++ + + +
Sbjct: 248 SKHTEEECREKPKNDDHGKNKRSNIK------CYKCGKIGHYANECRSKNKERAHVTLEE 301
Query: 260 NVVQSDG---SCSEEDLLCVSSVKCTDAWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLG 316
V D S SEE+ S+ D W++DSGC+ HMT+ +F++ + +
Sbjct: 302 EDVNEDHMLFSASEEE----STTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIRVR 357
Query: 317 DDKPCIIKGMRQVKIALDDGGVRTLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDIL 376
+ + G + + + G R + V V + KNL+S+ + +GY + ++ R I+
Sbjct: 358 NGDIVMTAGKGDITV-MTRHGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCII 416
Query: 377 RVSKGAMTVMRAKRTAGNI-YKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMEL 435
+ + G +M + T + KL A+V+T++ WH RLGH+S + + ++
Sbjct: 417 QDANG-KEIMNIEMTDKSFKIKLSSVEEEAMTANVQTEE----TWHKRLGHVSNKRLQQM 471
Query: 436 HKRNMLKGVRSCII--GLCKYCVLGKQCRVRF-KTGHHKTKGILDYVHSDVRGPTKEPSV 492
+ ++ G+ + CK C LGKQ R F K KT+ L+ VH+DV GP + S+
Sbjct: 472 QDKELVNGLPRFKVTKETCKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSI 531
Query: 493 *GFRYFVTFTDDFSRKVWVYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTD 552
G RY+V F DD++ WVYF+K KSE FA FK +KA VE Q+ IK LR
Sbjct: 532 DGSRYYVLFLDDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRP-------- 583
Query: 553 KNFMHFCEENGIQRHFSVRKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMA 612
FCE+ GI R ++ +PQQNG AER NR+L E AR + + L LWA + +
Sbjct: 584 --MEVFCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTS 641
Query: 613 CYLVNRSPRASLDGKVAE-EVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CII 671
YL NR P +++ V E W G+ ++S+LRIF YVHI + R KLD K+K I+
Sbjct: 642 AYLQNRLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGIL 701
Query: 672 IGYNKGVKGYKLWDPVKKKVIVSRDVVF--------DE*SMLKQSDVTVVPD-----TEV 718
IGY+ KGY+++ +KV VSRDVVF D+ +K++ V + D +
Sbjct: 702 IGYSNQTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQ 761
Query: 719 ENSSQDKIQVDI-------EETPVSPRQIVAQQQSEPGSDSGEVQDYTLVRDREPSRITP 771
E SS D Q+D E + Q+ Q++ E + + + ++ P
Sbjct: 762 ETSSHDLSQIDDHANNGEGETSSHVLSQVNDQEERETSESPKKYKSMKEILEKAPRMEND 821
Query: 772 PVRYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPH 831
G E A L ++ +P TY EA E W AM EE++ ++KN T LV P
Sbjct: 822 EAAQGIE-----ACLVANEEPQTYDEARGDKE---WEEAMNEEIKVIEKNRTWKLVDKPE 873
Query: 832 GKRVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLA 891
K VI KW+YK K + K KA LV +G+SQ GIDY E F+PV R+ +IR +LA
Sbjct: 874 KKNVISVKWIYKIKTDAS-GNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLA 932
Query: 892 LVASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQ 951
A M L QMDVK+ FL+G LEE++Y+ QP GF G V +L ++LYGLKQ+PR
Sbjct: 933 YAAQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRA 992
Query: 952 WYKRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKL 1011
WY+R DSY ++ G+ R D +Y + + + LYVDD++I N+ H +N K +
Sbjct: 993 WYERIDSYFIQNGFARSMNDAALYSKKKGE-DVLIVSLYVDDLIITGNNTHLINTFKKNM 1051
Query: 1012 GKEFDMKDLGAAKKILGMEIHKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLT 1068
EF+M DLG LGME+++D ++LSQ+ Y ++ +F M ++ VSTPLT
Sbjct: 1052 KDEFEMTDLGLLNYFLGMEVNQDDSG--IFLSQEKYANKLIDKFGMKESKSVSTPLT 1106
Score = 91.3 bits (225), Expect = 3e-18
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 1188 CWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKELGVE-QGGVQLHCDSQSAIYLT 1246
CW+S Q TVA ST EAEY+AV A +A+WL L ++ G++ + G+ + CD++SAI +
Sbjct: 1222 CWQSCKQQTVAQSTAEAEYIAVCAATNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIG 1281
Query: 1247 NNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKF 1298
N V H RTKHI++++H +RE I L+ + D LTK ++ +F
Sbjct: 1282 RNPVQHRRTKHIEIKYHFVREAEHKGLIQLEYCKGEDQLADVLTKALSVSRF 1333
>At3g25450 hypothetical protein
Length = 1343
Score = 488 bits (1255), Expect = e-137
Identities = 364/1289 (28%), Positives = 607/1289 (46%), Gaps = 72/1289 (5%)
Query: 52 EMKEKAAGLITLCVSDDVMNHILDLTTLKDVWDKLESLYMSKTPMNKLFAKQRLYS---L 108
E + A L+ + + ++ + T VW+ ++S + + + + + L
Sbjct: 58 EKNDMARALLFQSIPESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKL 117
Query: 109 KMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGS-YDHLVTTLTYGKD- 166
KM++ + +V + I LG +++ L SLP Y H+V L D
Sbjct: 118 KMKDSETIDDYVGRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDL 177
Query: 167 -SITLDSISSTLLPHAQRRQSVEEGGGSSGEGLFVKGGQDRGRGKGKAVDSGKKKRSKSK 225
+ T + I+ + + R ++ G+ L + ++ + + K K+K
Sbjct: 178 KTTTFEDIAGRIKTYEDRVWDDDDSHEDQGK-LMTEVEEEVVDDLEEEEEEVINKEIKAK 236
Query: 226 DRKTTECYSCKQIGHWKRDCPNRSGKSGNNSSSANVVQSDGSCSEEDLLCVSSVKC-TDA 284
++ K + + + + ++ +E+++ C +A
Sbjct: 237 SHVIDRLLKLIRLQEQKE-----KEEDDTHEAESLMMHEVVYLNEKNIRPTELESCINNA 291
Query: 285 WVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCIIKGMRQVKIALDDGGVRTLSQV 344
W LD+G S HMT +R WF G V GDD IKG + G + L V
Sbjct: 292 WYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKILFDV 351
Query: 345 RYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGAMTVMRAKRTAGNIYKLLGGTIM 404
Y+ ++ N++SLG E+G + E+ L +G + + +A+R+ +YK+
Sbjct: 352 YYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLI-KAQRSRNRLYKVSLEVEN 410
Query: 405 GDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLKGVRSCIIG---LCKYCVLGKQC 461
+ T +++T +WH RLGH+S + + K+ ++ G+ S + C C+ GKQ
Sbjct: 411 SKCLQLTTTNEST-IWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCLFGKQA 469
Query: 462 RVRF-KTGHHKTKGILDYVHSDVRGPTKEPSV*GFRYFVTFTDDFSRKVWVYFMKYKSEV 520
R F K ++ +L+ +H D+ GP + RY DD SR +W +K KSE
Sbjct: 470 RHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLKEKSEA 529
Query: 521 FAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEENGIQRHFSVRKTPQQNGVA 580
F KFK +KA VE + G IK R+D G E+ F FC + GI RH + TPQQNGV
Sbjct: 530 FGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQNGVV 589
Query: 581 ERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPRASLDGKVAEEVWTGNPIDL 640
ER NRTL R + + + LW + + YL+NR SL + EV+ ++
Sbjct: 590 ERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHKKPNV 649
Query: 641 SNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGYKLWDPVKKKVIVSRDVVFD 700
+LR+F +Y + + KLD +S+ + +G G K Y+L DP K+++ VSRDVVFD
Sbjct: 650 EHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRDVVFD 709
Query: 701 E*SML----------KQSDVTVVPDTEVENS--SQDKIQVDIEETPVS-----PRQIVAQ 743
E K+S + +E N+ +++ I + EET + I+ +
Sbjct: 710 ENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDENIIEE 769
Query: 744 QQSEPGSDSGEVQDYTLVRDREPSRITPPVRYGF----EDLAAYALLTSSGDPSTYHEAM 799
++E S E + VR + I P + E A + LL + +P + EA
Sbjct: 770 AETEEHDQSQE--EPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVNDEPWDFKEAN 827
Query: 800 AS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGKRVIGCKWVYKKKLAVT*KEREKFKAH 859
S E W A EE++S++KN T +LV LP G + IG KWV+K K + K+KA
Sbjct: 828 KSKE---WRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLK-HNSDGSINKYKAR 883
Query: 860 LVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALVASMDMHLEQMDVKTTFLHGNLEEQIY 919
LV KGY Q G+D++E+F+PV R ++R+++AL AS + +DVKT FLHG L E +Y
Sbjct: 884 LVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGELREDVY 943
Query: 920 IEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWYKRFDSYMLRIGYRRCDYDCCVYVMSL 979
+ QPEGF+ V KL ++LYGL+Q+PR W + + + + + +C + +Y
Sbjct: 944 VSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEPSLY-RKQ 1002
Query: 980 DDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGKEFDMKDLGAAKKILGMEIHKDRGAKK 1039
+ + + + +YVDD+L+ ++L + K + +F+M DLG LG+E+ + +
Sbjct: 1003 EGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQSKDG-- 1060
Query: 1040 LWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFKLSLEQSPKIDSEIEGMSKIPYAVQLVV 1099
+ L Q+ Y + +L MSK N V+TP+ +LS Q K E + Y +
Sbjct: 1061 ITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETD------YRRNIGC 1114
Query: 1100 *CMLWFALDQIWHKQLVKCQVHVQAREAALGSSQVDPKILEGYNGSRYHV*QGARCCSIS 1159
L + + + + + RE+ + + + L+G + +G +
Sbjct: 1115 LRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGE-----N 1169
Query: 1160 CGICGLCR*SR**KVYNRICLYSCGGPICWKSSVQST--------VAMSTTEAEYMAVAE 1211
G+ G S + + S GG I + + T V +S+ EAE+MA E
Sbjct: 1170 AGLIGYSDSSHNVDLDDG---KSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATE 1226
Query: 1212 AAKEALWLTGLVKE-LGVEQGGVQLHCDSQSAIYLTNNQVYHARTKHIDVRFHKIRELLA 1270
AAK+A+WL L+ E +G E V + D++SAI LT N V+H R+KHI R+H IRE +
Sbjct: 1227 AAKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVE 1286
Query: 1271 SRQILLQKIHTSENTTDKLTKPVTSDKFM 1299
+ QI ++ + D LTK + KF+
Sbjct: 1287 NGQIEVEHVPGVRQKADILTKALGKIKFL 1315
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 414 bits (1065), Expect = e-115
Identities = 316/1092 (28%), Positives = 513/1092 (46%), Gaps = 106/1092 (9%)
Query: 52 EMKEKAAGLITLCVSDDVMNHILDLTTLKDVWD--KLESLYMSKTPMNKLFAKQRLYS-L 108
E + A L+ V + + + T K +W+ K +L + KL + L
Sbjct: 22 EKNDMARALLFQSVPESTILQVGKHKTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRL 81
Query: 109 KMQEGGDLQAHVYAFNNILADMTRLGVTVDDEDKAIILLCSLPGS-YDHLVTTLTYGKDS 167
M++ + V + I LG +++ L SLP Y H++ L D
Sbjct: 82 NMKDNETIDEFVGRISEISTKSESLGEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDL 141
Query: 168 IT--LDSISSTLLPHAQR----RQSVEEGG----GSSGEGLFVKGGQDRGRGKGKAVDSG 217
T + I + + R S EE G +S +GG RGRG+G++ G
Sbjct: 142 NTTGFEDIVGRMKTYEDRVCDEDDSPEEQGKLMYANSESSYDTRGG--RGRGRGRSSGRG 199
Query: 218 KKKRS-KSKDRKTTECYSCKQIGHWKRDCPNR------SGKSGNNSSSANVVQSDGSCSE 270
+ + +D+ CY C + GH+ +C +R + + N+ + ++S E
Sbjct: 200 RGGYGYQQRDKSKVICYRCDKTGHYASECLDRLLKLIKAQEQQQNNEDDDEIESL-MMHE 258
Query: 271 EDLLCVSSVK------CTD-AWVLDSGCSYHMTQHREWFNSFKSGDLGYVYLGDDKPCII 323
L SVK C+D +W LD+G S HMT + +WF+ G V GDD I
Sbjct: 259 VVYLNERSVKPKEFEACSDNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDI 318
Query: 324 KGMRQVKIALDDGGVR-TLSQVRYVLEVMKNLISLGTLHENGYSFKSEENRDILRVSKGA 382
KG + + + GG+R TL+ V ++ ++ N+ISLG E G + ++++ L +G
Sbjct: 319 KGKGSI-VLITKGGIRKTLTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGC 377
Query: 383 MTVMRAKRTAGNIYKLLGGTIMGDVASVETDDDATKLWHMRLGHLSERGMMELHKRNMLK 442
+ ++RA R+ +YK V+ + + K + + + ++ + N+ K
Sbjct: 378 L-LLRATRSRNRLYK------------VDLNVENVKCLQLEAATMVRKELV-IGISNIPK 423
Query: 443 GVRSCIIGLCKYCVLGKQCRVRF-KTGHHKTKGILDYVHSDVRGPTKEPSV*GFRYFVTF 501
+ C C+LGKQ R F K ++ +L+ VH D+ GP + + RY +
Sbjct: 424 EKET-----CGSCLLGKQARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVL 478
Query: 502 TDDFSRKVWVYFMKYKSEVFAKFKLWKAEVENQTGRKIKYLRSDNGTEYTDKNFMHFCEE 561
DD +R +W +K KSE F KF+ +K +VE ++G KIK R+D G E+ + F FC +
Sbjct: 479 IDDHTRYMWSMLLKEKSEAFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAK 538
Query: 562 NGIQRHFSVRKTPQQNGVAERMNRTLTEKARCLRLNACLSKCLWAATINMACYLVNRSPR 621
GI RH + TPQQNGV ER NRTL R + + + LW + + Y++NR
Sbjct: 539 EGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGT 598
Query: 622 ASLDGKVAEEVWTGNPIDLSNLRIFWRPAYVHISSEDRSKLDPKSK*CIIIGYNKGVKGY 681
SL + EV+ ++ +LR+F Y I KLD +SK + +G G K Y
Sbjct: 599 RSLQNQTPYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAY 658
Query: 682 KLWDPVKKKVI-------VSRDV---------VFDE*SMLKQSDVTVVP---------DT 716
+L DP +K+I +RD+ F + + D+ +
Sbjct: 659 RLLDPTNRKIIKWNNSDSETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEE 718
Query: 717 EVENSSQDKIQVDIEETPVS---PRQIVAQQQSEPGSDSGEVQDYTLVRDREPSRITPPV 773
E EN ++ Q+D EET S P + + + G + + DY L+ + E ++
Sbjct: 719 EGENEHNEQEQIDAEETQPSHATPLPTLRRSTRQVGKPN-YLDDYVLMAEIEGEQV---- 773
Query: 774 RYGFEDLAAYALLTSSGDPSTYHEAMAS*EKDKWMSAMVEEMESLKKNET*NLVQLPHGK 833
LL + +P + EA + +W A EE+ S++KN+T +L+ LP +
Sbjct: 774 -----------LLAINDEPWDFKEAN---KLKEWRDACKEEILSIEKNKTWSLIDLPVRR 819
Query: 834 RVIGCKWVYKKKLAVT*KEREKFKAHLVTKGYSQHKGIDYDEIFSPVVRHTSIRVVLALV 893
+VIG KWV+K K + K+KA LV KGY Q GIDYDE+F+ V R +IRV++AL
Sbjct: 820 KVIGLKWVFKIK-RNSDGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALA 878
Query: 894 ASMDMHLEQMDVKTTFLHGNLEEQIYIEQPEGFSETGDGRLVCKLKRSLYGLKQSPRQWY 953
AS + +DVKT FLHG L E +Y+ QPEGF+ + V KL ++LYGLKQ+PR W
Sbjct: 879 ASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWN 938
Query: 954 KRFDSYMLRIGYRRCDYDCCVYVMSLDDGSFIFLLLYVDDMLIAANHLHDVNELKTKLGK 1013
+ + + + + +C + VY ++ + + +YVDD+L+ + L + K +
Sbjct: 939 TKLNKILQELNFVKCSKEPSVY-RRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAG 997
Query: 1014 EFDMKDLGAAKKILGMEI-HKDRGAKKLWLSQKSYVEGVLSRFDMSKANHVSTPLTNHFK 1072
+F+M DLG LG+E+ H+ G + L Q+ Y ++ MS N V P+ +
Sbjct: 998 KFEMSDLGQLTYYLGIEVLHRKNG---IILRQERYAMKIIEEAGMSNCNPVLIPMAAGLE 1054
Query: 1073 LSLEQSPKIDSE 1084
L Q K +E
Sbjct: 1055 LCKAQEEKCITE 1066
Score = 92.8 bits (229), Expect = 1e-18
Identities = 52/120 (43%), Positives = 71/120 (58%), Gaps = 3/120 (2%)
Query: 1180 LYSCGGPICWKSSVQSTVAMSTTEAEYMAVAEAAKEALWLTGLVKEL-GVEQGGVQLHCD 1238
L+ C PI W S Q VA+S+ EAE+MA EAAK+A+WL L E+ G V + D
Sbjct: 1158 LHQC--PITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVD 1215
Query: 1239 SQSAIYLTNNQVYHARTKHIDVRFHKIRELLASRQILLQKIHTSENTTDKLTKPVTSDKF 1298
++SAI LT N V+H R+KHI R+H IRE + + + + + E D LTKP+ KF
Sbjct: 1216 NKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADILTKPLGRIKF 1275
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.323 0.138 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,359,108
Number of Sequences: 26719
Number of extensions: 1273857
Number of successful extensions: 4623
Number of sequences better than 10.0: 186
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3614
Number of HSP's gapped (non-prelim): 467
length of query: 1307
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1196
effective length of database: 8,352,787
effective search space: 9989933252
effective search space used: 9989933252
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Lotus: description of TM0003.6