BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0593a.4
(944 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean... 50 4e-06
TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk p... 46 8e-05
TC77148 ENOD20 43 6e-04
TC81882 similar to GP|9759349|dbj|BAB10004.1 contains similarity... 43 6e-04
BQ147280 similar to PIR|C86333|C863 hypothetical protein AAF7991... 43 6e-04
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ... 42 0.001
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba... 42 0.001
BG452235 weakly similar to PIR|C86333|C863 hypothetical protein ... 40 0.003
BF644093 weakly similar to GP|9558458|dbj| ESTs D22655(C0749) AU... 40 0.004
TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroele... 40 0.004
TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot... 40 0.004
BG644339 weakly similar to PIR|T48401|T484 histone deacetylase-l... 39 0.009
TC88229 similar to PIR|E84471|E84471 probable beta-1 3-glucanase... 39 0.009
TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [... 39 0.012
BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania maj... 39 0.012
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 39 0.012
TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF719... 38 0.021
TC79359 weakly similar to PIR|S49915|S49915 extensin-like protei... 38 0.021
TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - so... 37 0.027
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 37 0.027
>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
(93%)
Length = 1554
Score = 50.1 bits (118), Expect = 4e-06
Identities = 46/189 (24%), Positives = 67/189 (35%), Gaps = 17/189 (8%)
Frame = -2
Query: 440 PAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQP 499
P A T T+PP V S P + + P A P P+S P
Sbjct: 812 PTAITPVTTQPPTVVASPPITSQPPVTVAPKSAPVTSPAPKIAPASSPKVPPPQPPKSSP 633
Query: 500 AAQTTTPPHSPRSSFFQPSPSEAP------LWNLLQNPTSRSEDPT-SLLTIPYDPLSSE 552
+ T PP P P+P + P + P + PT + T P P +
Sbjct: 632 VSTPTLPPPLPPPPKISPTPVQTPPAPAPVKATPVPAPAPAKQAPTPAPATSPPIPAPTP 453
Query: 553 PIIHDQPEPNQTEP-----QPRTSDHSAPRAS-----ERPAVRPTDTDSSTAFTPVSFPI 602
I P P ++P +P+ H AP + + P PTDT + + P P
Sbjct: 452 AIEAPVPAPESSKPKRRRHRPKHRRHQAPAPAPTVIHKSPPAPPTDTTADSDTAPAPAPS 273
Query: 603 NTIDSPPSN 611
++ PSN
Sbjct: 272 FNLNGAPSN 246
>TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk protein
{Argiope trifasciata}, partial (3%)
Length = 1177
Score = 45.8 bits (107), Expect = 8e-05
Identities = 48/198 (24%), Positives = 70/198 (35%), Gaps = 21/198 (10%)
Frame = +3
Query: 441 AAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPE---S 497
A+ T R+ PP R + + + + + S + + S PL P P
Sbjct: 36 ASRTPLRSTPPTRPSSPTPSAPRTSSRSTPSTS-------PSRRPRSKTPLPPPPPPLPQ 194
Query: 498 QPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQ--------------NPTSRSEDPTSLLT 543
P +PP RS SP+ PLW P + S PT+ L
Sbjct: 195 HPKPPQKSPPRMRRSKPSPSSPAATPLWPQRTTPPPSPSTPRPSP*TPATPSTSPTAPLP 374
Query: 544 IPYDPLSSEPIIHDQPEPNQTEPQPRTSDHS----APRASERPAVRPTDTDSSTAFTPVS 599
P + P + +P T P P+ S +P A++R RPT SST +
Sbjct: 375 TPPPRTTLPPALTPRPPSPSTPPTPKPGPVSVSPASPSATQRVPWRPTARASSTKVPAAA 554
Query: 600 FPINTIDSPPSNTSENMR 617
P PS S + R
Sbjct: 555 KP*RRATRRPSAVSRSSR 608
>TC77148 ENOD20
Length = 1108
Score = 42.7 bits (99), Expect = 6e-04
Identities = 38/138 (27%), Positives = 53/138 (37%), Gaps = 12/138 (8%)
Frame = +3
Query: 493 PIPESQPAAQTTTP-PHSPRSSFFQP-----------SPSEAPLWNLLQNPTSRSEDPTS 540
P P S P +++TP PH PR S P SPS +P + +P RS P S
Sbjct: 429 PPPPSPPTPRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSPRSTPIPHPRKRS--PAS 602
Query: 541 LLTIPYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSF 600
P P S +P SE P++ P+ +DS + P S
Sbjct: 603 -------------------------PSPSPSLSKSPSPSESPSLAPSPSDSVASLAPSSS 707
Query: 601 PINTIDSPPSNTSENMRK 618
P + SP + S + K
Sbjct: 708 PSDESPSPAPSPSSSGSK 761
Score = 34.3 bits (77), Expect = 0.23
Identities = 26/84 (30%), Positives = 37/84 (43%)
Frame = +3
Query: 492 TPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSS 551
+P P P+ ++T PH + S PSPS + L S SE P SL P D ++S
Sbjct: 528 SPSPSPSPSPRSTPIPHPRKRSPASPSPSPS-----LSKSPSPSESP-SLAPSPSDSVAS 689
Query: 552 EPIIHDQPEPNQTEPQPRTSDHSA 575
+ P+ P P S S+
Sbjct: 690 ---LAPSSSPSDESPSPAPSPSSS 752
>TC81882 similar to GP|9759349|dbj|BAB10004.1 contains similarity to unknown
protein~gb|AAF72944.1~gene_id:MAH20.11 {Arabidopsis
thaliana}, partial (5%)
Length = 875
Score = 42.7 bits (99), Expect = 6e-04
Identities = 25/76 (32%), Positives = 36/76 (46%)
Frame = +3
Query: 493 PIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSE 552
P P PA P +P ++ PS P NL +NP + S PT+ T P++ +
Sbjct: 111 PCPPPNPAISAAEPTQTPTTTLLPPSLPNPPPLNL-KNPPNFSVSPTTKST----PIT-K 272
Query: 553 PIIHDQPEPNQTEPQP 568
P++H P P T P P
Sbjct: 273 PLVHAPPNPTTTAPNP 320
>BQ147280 similar to PIR|C86333|C863 hypothetical protein AAF79914.1
[imported] - Arabidopsis thaliana, partial (10%)
Length = 666
Score = 42.7 bits (99), Expect = 6e-04
Identities = 30/87 (34%), Positives = 42/87 (47%), Gaps = 3/87 (3%)
Frame = +2
Query: 349 EDLRAQGFEIDLDDFFSRLPPAPEFPSPPKKKTKRKMVLEESSEE-SDVPLVKKSKRKPD 407
ED + + D D S P P K +K K +L+E +E S +SK K +
Sbjct: 89 EDSKPVKKQDDNDKISSLKKPKNSNTKPLSKGSKLKKLLKEETEPISRATSASRSKVKKE 268
Query: 408 --DDDDDDDDDGEDGPPKKKQKKVRIV 432
DDDDD D+D +D P KK K ++V
Sbjct: 269 LKDDDDDSDEDDDDKPIAKKISKTKVV 349
>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
partial (97%)
Length = 1049
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/122 (25%), Positives = 45/122 (36%), Gaps = 1/122 (0%)
Frame = +3
Query: 492 TPIPESQPA-AQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLS 550
+P P + PA TTP SP P P ++ L +P P + + P
Sbjct: 264 SPAPPTPPANTPPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPPVQQ 443
Query: 551 SEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDSPPS 610
S P P P Q+ P P + ++P P P A P + + SPP+
Sbjct: 444 SPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALTPTPLSSPPA 623
Query: 611 NT 612
T
Sbjct: 624 TT 629
Score = 40.8 bits (94), Expect = 0.002
Identities = 46/168 (27%), Positives = 61/168 (35%), Gaps = 8/168 (4%)
Frame = +3
Query: 435 PTRVEPAAATVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPI 494
P V+ + V+ + PP + + A S+ P + S P PLTP
Sbjct: 321 PPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSS---------PPPVQQSPPPTPLTPP 473
Query: 495 PESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPI 554
P + PP SP F P P+ P T P LT PLSS P
Sbjct: 474 PVQSTPPPASPPPASPPP--FSPPPATPP------PATPPPATPPPALT--PTPLSSPPA 623
Query: 555 IHDQPEPNQTE-------PQPRTSDHSAPRASE-RPAVRPTDTDSSTA 594
P P + + P SD AP S P++ P+ TD S A
Sbjct: 624 TTPAPAPAKLKSKAPALAPVLSPSDAPAPGLSSLSPSISPSGTDDSGA 767
>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
partial (13%)
Length = 663
Score = 41.6 bits (96), Expect = 0.001
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +3
Query: 378 KKKTKRKMVLEESSEESDVPLVKKSKRKPDDDDDDDDDDGEDGPPKKKQK 427
KKK K++ E+ ++ + KK K K D ++DDD+ GEDG KKK K
Sbjct: 336 KKKEKKEKGKEDKDKDGEEKKSKKDKEKKKDKNEDDDE-GEDGSKKKKNK 482
>BG452235 weakly similar to PIR|C86333|C863 hypothetical protein AAF79914.1
[imported] - Arabidopsis thaliana, partial (7%)
Length = 692
Score = 40.4 bits (93), Expect = 0.003
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +1
Query: 349 EDLRAQGFEIDLDDFFSRLPPAPEFPSPPKKKTKRKMVLEESSEE-SDVPLVKKSKRKPD 407
ED + + D D S P P K +K K +L+E +E S +SK K +
Sbjct: 79 EDSKPVKKQDDNDKISSLKKPKNSNTKPLXKGSKLKKLLKEETEPISRATSASRSKVKKE 258
Query: 408 --DDDDDDDDDGEDGPPKKKQKKVRIVV 433
DDDDD D+D +D P KK K + V
Sbjct: 259 LKDDDDDSDEDDDDKPIAKKISKTKYCV 342
>BF644093 weakly similar to GP|9558458|dbj| ESTs D22655(C0749)
AU097597(C12421) C26485(C12421) AU0976(C0749)
C24828(S15393) correspond to a, partial (16%)
Length = 483
Score = 40.0 bits (92), Expect = 0.004
Identities = 28/81 (34%), Positives = 43/81 (52%), Gaps = 11/81 (13%)
Frame = +1
Query: 376 PPKKKTKRKMVLEE----SSEESDVPLVKKSK-RKPDDDDDDDDDD----GEDGPPK--K 424
P ++ +R+ +LE +E D P+ K + R DDDDD+DD+D GE+G + K
Sbjct: 61 PTRRSIRRRKILEARTAAEAEFDDGPVRSKQRSRNYDDDDDEDDEDVDRSGENGKAEEVK 240
Query: 425 KQKKVRIVVKPTRVEPAAATV 445
K KK ++ V AAA +
Sbjct: 241 KVKKPKVKKPKVTVAEAAAKI 303
>TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroelement pol
polyprotein {Oryza sativa} [Oryza sativa (japonica
cultivar-group)], partial (2%)
Length = 1235
Score = 40.0 bits (92), Expect = 0.004
Identities = 29/81 (35%), Positives = 39/81 (47%), Gaps = 8/81 (9%)
Frame = +3
Query: 481 SALLQHSSNPLTPIPESQPAAQTTTPPHSP--RSSFFQPSPSEA------PLWNLLQNPT 532
S L HSS+ LTPIP P ++TPP SP SF PSP + P+ + +P
Sbjct: 534 SPLSSHSSDALTPIPPPSPLNGSSTPP-SPVLDGSFPPPSPLDGSTLTPPPVQQVGSSPP 710
Query: 533 SRSEDPTSLLTIPYDPLSSEP 553
D T+ +T P+S P
Sbjct: 711 PLGTDVTNPITPTQSPVSEPP 773
Score = 29.6 bits (65), Expect = 5.7
Identities = 27/104 (25%), Positives = 42/104 (39%), Gaps = 4/104 (3%)
Frame = +3
Query: 569 RTSDHSAPRASERPAVRPTDTDSSTAFTPVS--FPINTIDSPPSNTSENMRKFMEVRKEK 626
+T+ +P S P+ P + SS A TP+ P+N +PPS ++
Sbjct: 486 QTTSPPSPSPSVAPSPSPLSSHSSDALTPIPPPSPLNGSSTPPS-------PVLDGSFPP 644
Query: 627 VSALEEHYLTCPSPRRYPGPRPERLVDPDEPI--LANPIQEADP 668
S L+ LT P ++ P D PI +P+ E P
Sbjct: 645 PSPLDGSTLTPPPVQQVGSSPPPLGTDVTNPITPTQSPVSEPPP 776
>TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
{Homo sapiens}, partial (11%)
Length = 591
Score = 40.0 bits (92), Expect = 0.004
Identities = 46/162 (28%), Positives = 60/162 (36%), Gaps = 2/162 (1%)
Frame = +2
Query: 446 RRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQPAAQTTT 505
R T A +T SS+ S+ + S P S S+ P S PA+ TT
Sbjct: 149 RATPASASLTSSSSIPSQRSRTSRS--------PSSRPRHTSTGTAPPFAVSSPASSPTT 304
Query: 506 PPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPE--PNQ 563
P S RSS S P + P + PT P S P P P+
Sbjct: 305 PS-STRSSPGSTSTPRTPSTSFSARPPPSTPPPT--------PFRSRPTKGSSPSSTPSS 457
Query: 564 TEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTI 605
+ P TS +P P RP + TA +P S P N+I
Sbjct: 458 SSPPAPTSPAISPSRPSAPTRRP--SPPGTACSPRSRPPNSI 577
>BG644339 weakly similar to PIR|T48401|T484 histone deacetylase-like protein
- Arabidopsis thaliana, partial (26%)
Length = 763
Score = 38.9 bits (89), Expect = 0.009
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = +1
Query: 378 KKKTKRKMVLEESSEESDVPLVKKSKRKPD------DDDDDDDDDGEDGPPKKKQKKVRI 431
KK+ + +S +SDVPL D DDDD ++DD E+ PKK ++K R
Sbjct: 478 KKEAESDEDDSDSEGDSDVPLGMDGPEGMDFSGDSEDDDDSEEDDSEEETPKKVEQKKRP 657
Query: 432 VVKPTRVEPAAATVRRTEPPA 452
P +V P + + PA
Sbjct: 658 APSP-KVAPGSGKKAKQVTPA 717
>TC88229 similar to PIR|E84471|E84471 probable beta-1 3-glucanase [imported]
- Arabidopsis thaliana, partial (69%)
Length = 1368
Score = 38.9 bits (89), Expect = 0.009
Identities = 44/136 (32%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Frame = +2
Query: 486 HSSNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIP 545
H P+ + A QTT P HS SSF N ++ S S PT L + P
Sbjct: 83 HYLQMAVPLE*TMVA*QTTYPQHSK*SSF----------*NHKESTGSNSTTPTRLFSNP 232
Query: 546 Y-DPLSSEPIIHD------QPE--PNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFT 596
Y DP S P QPE P + +TS + P+ +P+ P+ T SS+ T
Sbjct: 233 YPDPESK*P*TSQTNNSFTQPENSPTPSHGSKKTSSFTTPKPKSKPS--PSATKSSSTHT 406
Query: 597 PVSFPINTIDSPPSNT 612
P NT SPP T
Sbjct: 407 T---PPNT-SSPP*KT 442
>TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [imported] -
Arabidopsis thaliana, partial (48%)
Length = 1221
Score = 38.5 bits (88), Expect = 0.012
Identities = 37/120 (30%), Positives = 47/120 (38%), Gaps = 8/120 (6%)
Frame = +3
Query: 490 PLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPL 549
P+ +P S AA +T P P PSP+ L + P S + PT+L T PL
Sbjct: 78 PMHRLPTSSSAAASTASPPPP------PSPANPTLTTVAPTPKSTTVSPTTLWT---SPL 230
Query: 550 SSEPIIHDQPEPNQTEPQPRTSDHS---APRASE-----RPAVRPTDTDSSTAFTPVSFP 601
D P P T P+T S R+SE R +RP T PV P
Sbjct: 231 PIP*PAADPPPPASTRSDPKTISSSPTLTSRSSEELQTVRIRIRPV-----TEIAPVPEP 395
>BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania major}, partial
(1%)
Length = 766
Score = 38.5 bits (88), Expect = 0.012
Identities = 47/160 (29%), Positives = 65/160 (40%), Gaps = 1/160 (0%)
Frame = +1
Query: 439 EPAAATVRRT-EPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPES 497
+PAA+ + T +PPA + S+ S P AS P + + + N TP P S
Sbjct: 10 QPAASNLHTTWQPPASSSPSARPSPPPTTASSTPPGAPTPSP-TPTRRATLNGNTPAPAS 186
Query: 498 QPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHD 557
P AQ T PP P ++ PSPS T + PTS T P ++ P
Sbjct: 187 -PTAQAT-PPTGPSTA--APSPS-----------TCTTTGPTSSSTSASSPAATSP---- 309
Query: 558 QPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTP 597
T P P +S PA P+ + SST+ P
Sbjct: 310 ----RTTSPSPHSS-------GTPPAPAPSASRSSTSRPP 396
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 38.5 bits (88), Expect = 0.012
Identities = 23/64 (35%), Positives = 30/64 (45%), Gaps = 17/64 (26%)
Frame = +1
Query: 388 EESSEESDVPLVKKSKRKPDDDDDDDD-----------------DDGEDGPPKKKQKKVR 430
+E ++ D P+ + DDD+DDDD DD ED PP KK+K V
Sbjct: 394 DEDADPEDDPVPNGAGGSDDDDEDDDDDDDDNDDGEDEDEDEEEDDDEDQPPSKKKK*VN 573
Query: 431 IVVK 434
IV K
Sbjct: 574 IVGK 585
>TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF71991.1
[imported] - Arabidopsis thaliana, partial (11%)
Length = 679
Score = 37.7 bits (86), Expect = 0.021
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Frame = +2
Query: 488 SNPLTPIPESQPAAQTTT---PPHSPRSSFFQPSPSEAPLWNLLQNPTSRSE-------- 536
SN TP P S + T++ PP +P +S PSP P L +PT S
Sbjct: 71 SNSSTPSPSSSTSTSTSSSSSPPPTPSTSSTTPSP---PPPTSLSSPTPTSNHLSSA*PT 241
Query: 537 DPTSLLT-IPYDPLSSEPIIHDQPEPNQTE-PQPRTSDHSAPRASERPAVRPTDTDSSTA 594
PT+ LT +P PL+S + P QT P P S S+P P + + SS+A
Sbjct: 242 TPTNTLTAVPSTPLNSP--CSNLHLPQQTSLPSPLPS--SSPSYQTTPPALASVSLSSSA 409
Query: 595 FTPVSFPINTI 605
TP+ P +++
Sbjct: 410 -TPLPLPAHSL 439
>TC79359 weakly similar to PIR|S49915|S49915 extensin-like protein - maize,
partial (3%)
Length = 1170
Score = 37.7 bits (86), Expect = 0.021
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 20/128 (15%)
Frame = +3
Query: 506 PPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIIHDQPEPNQTE 565
P SP+SS PS + +PT+ P T+ P S P + P + +
Sbjct: 228 PASSPKSSVTAKPPSSVSV-----SPTNSPASPAKSPTL--SPPSQTPAV--SPSGSAST 380
Query: 566 PQPRTSDHSA-----PRASERPAVRPTDTDSST-------------AFTPVSFPIN--TI 605
P P TS + P +S PA+ P++ SST A +PVS P+ ++
Sbjct: 381 PPPATSPPAKSPAVQPPSSVSPAISPSNNVSSTPPVSSPASSPPTAAVSPVSSPVEAPSV 560
Query: 606 DSPPSNTS 613
SPP +S
Sbjct: 561 SSPPEASS 584
>TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - soybean
(fragment), partial (76%)
Length = 821
Score = 37.4 bits (85), Expect = 0.027
Identities = 33/126 (26%), Positives = 41/126 (32%)
Frame = +2
Query: 545 PYDPLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINT 604
P P P + P P P P S P S P P S +P+S P N
Sbjct: 89 PPSPSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPP-PYHYQSPPPPSPISHPPNY 265
Query: 605 IDSPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQ 664
SPP + + HY++ P P + P P P PI P
Sbjct: 266 YKSPPPPSPSPPPPY-------------HYVSPPPPVKSPPPPAYIYASPPPPIYN*PHN 406
Query: 665 EADPLV 670
PLV
Sbjct: 407 TKSPLV 424
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 37.4 bits (85), Expect = 0.027
Identities = 48/215 (22%), Positives = 70/215 (32%), Gaps = 22/215 (10%)
Frame = +3
Query: 545 PYDPLSSEPIIHDQPEPNQTE--PQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPI 602
P P S P P P+ T P P T +S P PA+ P +T P P
Sbjct: 72 PSAPPPSTPATPSSPPPSTTPSAPPPSTPSNSPPSPPTTPAISPPSGGGTTPSPPSRTPP 251
Query: 603 NTID-------------SPPSNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPE 649
++ D SPPS++S + + + V L + C R+ R
Sbjct: 252 SSDDSPSPPSSKTPPPPSPPSSSSISTGTVIGIAVGAVVVLVFFSICCICFRKKKRRR-- 425
Query: 650 RLVDPDEPILANPIQEADPLVQQEPIQPEPEP-------EHSVSNQSSVRSPHPLVETSD 702
DE + P Q+ ++P P H S+ + P P
Sbjct: 426 ----RDEEYYGQQNYQQPPPAQRPKVEPYGGPPQQWQNNAHPPSDHVVSKPPPPAPIPPR 593
Query: 703 PHLGTSEPNAPMINIGSPQGASEAHSSNHPTSPES 737
P + P P I S G+ +S P S
Sbjct: 594 PPSHVAPPPPPPAFISSSGGSGSNYSGGELLPPPS 698
Score = 35.0 bits (79), Expect = 0.14
Identities = 47/216 (21%), Positives = 77/216 (34%), Gaps = 2/216 (0%)
Frame = +3
Query: 488 SNPLTPIPESQPAAQTTTPPHSPRSSFFQPSPSEAPLWNLLQNPTSRSEDPTSLLTIPYD 547
S+P P + P + PP S ++ P PS P P++ S P S T P
Sbjct: 27 SSPPPSTPANPPPVTPSAPPPSTPATPSSPPPSTTP---SAPPPSTPSNSPPSPPTTP-- 191
Query: 548 PLSSEPIIHDQPEPNQTEPQPRTSDHSAPRASERPAVRPTDTDSSTAFTPVSFPINTIDS 607
+S P P P S P + P P + S + T + + +
Sbjct: 192 AISPPSGGGTTPSPPSRTPPSSDDSPSPPSSKTPPPPSPPSSSSISTGTVIGIAVGAVVV 371
Query: 608 PP--SNTSENMRKFMEVRKEKVSALEEHYLTCPSPRRYPGPRPERLVDPDEPILANPIQE 665
S RK R+++ +++Y P +R P+ E P + N
Sbjct: 372 LVFFSICCICFRKKKRRRRDEEYYGQQNYQQPPPAQR---PKVEPYGGPPQQWQNNAHPP 542
Query: 666 ADPLVQQEPIQPEPEPEHSVSNQSSVRSPHPLVETS 701
+D +V + P P P P S+ + P + +S
Sbjct: 543 SDHVVSKPP-PPAPIPPRPPSHVAPPPPPPAFISSS 647
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.130 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,684,362
Number of Sequences: 36976
Number of extensions: 447169
Number of successful extensions: 5365
Number of sequences better than 10.0: 278
Number of HSP's better than 10.0 without gapping: 3633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4578
length of query: 944
length of database: 9,014,727
effective HSP length: 105
effective length of query: 839
effective length of database: 5,132,247
effective search space: 4305955233
effective search space used: 4305955233
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Lotus: description of TM0593a.4