BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0587.7
(319 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC89353 weakly similar to GP|9279704|dbj|BAB01261.1 gb|AAF25964.... 89 2e-18
TC84316 weakly similar to GP|11994612|dbj|BAB02749. gb|AAC24186.... 84 9e-17
CA921015 homologue to SP|Q8Y7G1|DPO3 DNA polymerase III polC-typ... 80 1e-15
BI272761 79 2e-15
TC81783 similar to GP|9294656|dbj|BAB03005.1 gb|AAF30317.1~gene_... 38 2e-13
AW256529 homologue to GP|496669|emb|C C-169 protein {Saccharomyc... 65 3e-11
BG453066 64 1e-10
BG455472 62 3e-10
BG646118 58 4e-09
TC82156 similar to GP|20197985|gb|AAM15340.1 F-box protein famil... 56 2e-08
TC81493 weakly similar to PIR|F86249|F86249 protein F25C20.23 [i... 55 3e-08
TC92509 weakly similar to PIR|T49129|T49129 hypothetical protein... 53 2e-07
CA920710 similar to PIR|S64314|S643 probable membrane protein YG... 50 1e-06
BG586574 49 3e-06
TC84654 47 1e-05
BG646382 43 3e-05
CB893854 45 4e-05
TC91947 similar to GP|8096410|dbj|BAA95880.1 hypothetical protei... 35 6e-05
TC85359 weakly similar to PIR|C96592|C96592 hypothetical protein... 44 1e-04
TC91763 similar to GP|10177628|dbj|BAB10775. gb|AAF30317.1~gene_... 43 1e-04
>TC89353 weakly similar to GP|9279704|dbj|BAB01261.1
gb|AAF25964.1~gene_id:MYA6.2~similar to unknown protein
{Arabidopsis thaliana}, partial (10%)
Length = 1482
Score = 89.4 bits (220), Expect = 2e-18
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 4/154 (2%)
Frame = +3
Query: 168 RFLYSSFGFGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQSFPVSLSH- 226
RFLY GFGYD +ND YKV+AV +C+ + +E +Y GG W IQ FP S
Sbjct: 516 RFLYR--GFGYDQVNDRYKVLAVVQNCY--NLDETKTLIYTFGGKDWTTIQKFPCDPSRC 683
Query: 227 -ISQLGV--YISGTLNWEVKTDNYTFIIVSLDLGTEEYSQLSLPYSPLYGEDFEFPFLAV 283
+ +LGV ++SG LNW V +IV D+ E Y ++SLP YG+ + L V
Sbjct: 684 DLGRLGVGKFVSGNLNWIVSKK----VIVFFDIEKETYGEMSLPQD--YGD--KNTVLYV 839
Query: 284 LKDCLCILENNEGDNRFLVWQMKKFGVHNSWIQL 317
+ + + ++ ++VW MK++GV SW +L
Sbjct: 840 SSNRIYVSFDHSNKTHWVVWMMKEYGVVESWTKL 941
>TC84316 weakly similar to GP|11994612|dbj|BAB02749.
gb|AAC24186.1~gene_id:MGL6.4~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (10%)
Length = 892
Score = 83.6 bits (205), Expect = 9e-17
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Frame = +3
Query: 168 RFLYSSFGFGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQ--SFPVSLS 225
RF+Y +GFGYD +N YK++AV F E +Y G + +N++ FP
Sbjct: 432 RFIY--YGFGYDQVNHKYKLLAV--KAFSRITE---TMIYTFGENSCKNVEVKDFPRYPP 590
Query: 226 HISQLGVYISGTLNWEVKTDNYTFIIVSLDLGTEEYSQLSLPYSPLYGEDFEFPFLAVLK 285
+ LG ++SGTLNW V + I+S D+ E Y Q+ LP +G P L VL
Sbjct: 591 NRKHLGKFVSGTLNWIVDERDGRATILSFDIEKETYRQVLLPQ---HGYAVYSPGLYVLS 761
Query: 286 DCLCILENNEGDNRFLVWQMKKFGVHNSWIQL 317
+C+C+ + D R+ +W MKK+GV SW +L
Sbjct: 762 NCICVC-TSFLDTRWQLWMMKKYGVAESWTKL 854
>CA921015 homologue to SP|Q8Y7G1|DPO3 DNA polymerase III polC-type (EC
2.7.7.7) (PolIII). {Listeria monocytogenes}, partial
(0%)
Length = 824
Score = 79.7 bits (195), Expect = 1e-15
Identities = 51/145 (35%), Positives = 77/145 (52%), Gaps = 1/145 (0%)
Frame = -1
Query: 176 FGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQSFPVSLSHISQLGVYIS 235
FGYD D +V+ V + V VY +G +W+ I+ P + I + GV++S
Sbjct: 821 FGYDHFIDNIRVMFVL--------PKNEVSVYTLGTDYWKRIEDIPYN---IFEEGVFVS 675
Query: 236 GTLNWEVKTDNYTFIIVSLDLGTEEYSQLSLPYSPLYGEDFEFPFLAVLKDCLCILENNE 295
GT+NW D++ I+SLD+ E Y Q+ LP + + L VL++CLCIL +
Sbjct: 674 GTVNWLASDDSF---ILSLDVEKESYQQVLLP-----DTENDLWILGVLRNCLCILATS- 522
Query: 296 GDNRFL-VWQMKKFGVHNSWIQLYN 319
N FL VW M ++G SW +LY+
Sbjct: 521 --NLFLDVWIMNEYGNQESWTKLYS 453
>BI272761
Length = 600
Score = 79.3 bits (194), Expect = 2e-15
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Frame = +2
Query: 174 FGFGYDCMNDTYKVVAVAVSCFREHKE-ERVVKVYDMGGSFWRNIQSFPVSLSHISQLGV 232
+GFGYD D YK+V+++ ++ + VK+Y M W+ + S P +L +GV
Sbjct: 134 YGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSMPYALCCARTMGV 313
Query: 233 YISGTLNWEVKTD---NYTFIIVSLDLGTEEYSQLSLPYSPLYGEDFEFPFLAVLKDCLC 289
++SG L+W V D +IV+ DL E + +++LP + D + +A+L LC
Sbjct: 314 FVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKFDMD---VALLXGMLC 484
Query: 290 ILENNEGDNRFLVWQMKKFGVHNS 313
I+E N G + F VW M ++G H+S
Sbjct: 485 IIE-NRGSDGFDVWVMXEYGSHDS 553
>TC81783 similar to GP|9294656|dbj|BAB03005.1
gb|AAF30317.1~gene_id:F14O13.6~similar to unknown
protein {Arabidopsis thaliana}, partial (6%)
Length = 1225
Score = 38.1 bits (87), Expect(3) = 2e-13
Identities = 17/37 (45%), Positives = 25/37 (66%)
Frame = +2
Query: 283 VLKDCLCILENNEGDNRFLVWQMKKFGVHNSWIQLYN 319
+L+DCLC+ E + D F VW MK++G SW +LY+
Sbjct: 875 MLRDCLCVYEAS--DLFFNVWIMKEYGNQESWTKLYS 979
Score = 37.4 bits (85), Expect(3) = 2e-13
Identities = 18/44 (40%), Positives = 25/44 (55%)
Frame = +1
Query: 226 HISQLGVYISGTLNWEVKTDNYTFIIVSLDLGTEEYSQLSLPYS 269
+I Q G+++ GT+NW I+SLDL E Y +L LP S
Sbjct: 700 YILQPGIFVGGTVNWMASDIADLLFILSLDLEKESYQKLFLPDS 831
Score = 36.2 bits (82), Expect(3) = 2e-13
Identities = 21/56 (37%), Positives = 28/56 (49%)
Frame = +3
Query: 173 SFGFGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQSFPVSLSHIS 228
S FGYD D YKVVA++ + V V +G +WR I+ P+ L H S
Sbjct: 567 SISFGYDHFIDNYKVVAIS--------SKYEVFVNALGTDYWRRIREHPLLLLHPS 710
>AW256529 homologue to GP|496669|emb|C C-169 protein {Saccharomyces
cerevisiae}, partial (7%)
Length = 624
Score = 65.1 bits (157), Expect = 3e-11
Identities = 37/105 (35%), Positives = 60/105 (56%), Gaps = 4/105 (3%)
Frame = +1
Query: 217 IQSFPVSLSHISQLGVYISGTLNW----EVKTDNYTFIIVSLDLGTEEYSQLSLPYSPLY 272
I+ FP + SQ G+++SGT+NW ++ +N IVSLDL E Y ++S P Y
Sbjct: 4 IEDFPSLMIPYSQHGIFVSGTVNWLADYDLDDNNSLGTIVSLDLRKEIYQEIS---QPDY 174
Query: 273 GEDFEFPFLAVLKDCLCILENNEGDNRFLVWQMKKFGVHNSWIQL 317
G+ L +++CLC+ +++ + VW MK++G SWI+L
Sbjct: 175 GDVTVKLSLGAMRECLCVFSHSDSFDD--VWLMKEYGNEESWIKL 303
>BG453066
Length = 655
Score = 63.5 bits (153), Expect = 1e-10
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Frame = +1
Query: 173 SFGFGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQSFPVSLSHISQLGV 232
+ FGYDC D YKV+AV+ + V +Y +G +W+ I P + I + G+
Sbjct: 370 TISFGYDCFIDKYKVIAVS--------SKNEVFLYTLGTDYWKRIDDIPYYCT-ICRSGL 522
Query: 233 YISGTLNWEVKTDNYT--FIIVSLDLGTEEYSQLSLP 267
Y+SG +NW V ++ + + I+SLDL E Y +L P
Sbjct: 523 YVSGAVNWYVHDESXSSLYFILSLDLXNESYQELYPP 633
>BG455472
Length = 505
Score = 62.0 bits (149), Expect = 3e-10
Identities = 45/148 (30%), Positives = 70/148 (46%)
Frame = +3
Query: 171 YSSFGFGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQSFPVSLSHISQL 230
++S FGYD D YKV+ +E V+ +G +WR I+ +
Sbjct: 93 WTSLSFGYDHFIDNYKVIVXX--------DENEVRXNTLGTDYWRKIEDIHCYTKYGP-- 242
Query: 231 GVYISGTLNWEVKTDNYTFIIVSLDLGTEEYSQLSLPYSPLYGEDFEFPFLAVLKDCLCI 290
G+++ GT+NW V D +I+SLDL E +L P +G + + L VL+D L +
Sbjct: 243 GIFVCGTVNW-VXWD----VIISLDLXKESCQELC---PPDFGNENNWWNLGVLRDXL*V 398
Query: 291 LENNEGDNRFLVWQMKKFGVHNSWIQLY 318
+ D + VW MK+ G W +LY
Sbjct: 399 FAGS--DEYWDVWIMKEXGNKEXWTKLY 476
>BG646118
Length = 764
Score = 58.2 bits (139), Expect = 4e-09
Identities = 38/103 (36%), Positives = 57/103 (54%), Gaps = 3/103 (2%)
Frame = -1
Query: 220 FPVSLSHISQLGVYISGTLNWEV--KTDN-YTFIIVSLDLGTEEYSQLSLPYSPLYGEDF 276
FP + LG +SGT+NW V + DN + IVSLDLG+E ++ LP
Sbjct: 746 FPFGCVPLQFLGKSVSGTINWLVARQYDNKFQDCIVSLDLGSESCKEVLLPKEVDTSTLR 567
Query: 277 EFPFLAVLKDCLCILENNEGDNRFLVWQMKKFGVHNSWIQLYN 319
+L VL+DCLC++ ++ VW MK+ G ++SW +LY+
Sbjct: 566 LRWYLGVLRDCLCLVFGHD------VWIMKEHGNNDSWAKLYS 456
>TC82156 similar to GP|20197985|gb|AAM15340.1 F-box protein family AtFBX9
{Arabidopsis thaliana}, partial (4%)
Length = 1136
Score = 55.8 bits (133), Expect = 2e-08
Identities = 42/117 (35%), Positives = 57/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 176 FGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQSFPVSLSHISQLGVYIS 235
FGYD D+YKV A + + E V+ MG + WR IQ FP + + G ++S
Sbjct: 807 FGYDHSTDSYKVAAFIK--WMPNSEIYKTYVHTMGTTSWRMIQDFP--CTPYLKSGKFVS 974
Query: 236 GTLNWEVKTDNY---TFIIVSLDLGTEEYSQLSLPYSPLYGE-DFEFPFLAVLKDCL 288
T NW D Y + ++VSL L E Y ++ P YG D L VL+DCL
Sbjct: 975 WTFNWLAYKDKYSVSSLLVVSLHLENESYGEI---LQPDYGSVDVLSISLWVLRDCL 1136
>TC81493 weakly similar to PIR|F86249|F86249 protein F25C20.23 [imported] -
Arabidopsis thaliana, partial (9%)
Length = 728
Score = 55.5 bits (132), Expect = 3e-08
Identities = 30/98 (30%), Positives = 52/98 (52%), Gaps = 4/98 (4%)
Frame = +1
Query: 174 FGFGYDCMNDTYKVVAVAVSCFREHKE-ERVVKVYDMGGSFWRNIQSFPVSLSHISQLGV 232
+GFGYD D YK+V+++ ++ + V +Y MG W + P +L +GV
Sbjct: 433 YGFGYDSATDDYKLVSISNFVDLHNRSYDSHVTIYTMGSDVWMPLPGVPYALCCARPMGV 612
Query: 233 YISGTLNWEVK---TDNYTFIIVSLDLGTEEYSQLSLP 267
++SG L+W V + +IV+ DL E + +++LP
Sbjct: 613 FVSGALHWVVPRALEPDSRDLIVAFDLRFEVFREVALP 726
>TC92509 weakly similar to PIR|T49129|T49129 hypothetical protein F26G5.80 -
Arabidopsis thaliana, partial (8%)
Length = 858
Score = 52.8 bits (125), Expect = 2e-07
Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +3
Query: 174 FGFGYDCMNDTYKVVAVAVSCFREHKEERVVKVYDMGGSFWRNIQSFPVSLSHISQLGVY 233
F FGYD D YKV A+ R V+V+ MG S WR I+ FP S S I G++
Sbjct: 609 FTFGYDPFADNYKVFAITFCVKRT-----TVEVHTMGTSSWRRIEDFP-SWSFIPDSGIF 770
Query: 234 ISGTLNW-EVKTDNYTFIIVSLDLGTEEY 261
++G ++W IVSLDL E Y
Sbjct: 771 VAGYVHWLTYDGPGSQREIVSLDLEDESY 857
>CA920710 similar to PIR|S64314|S643 probable membrane protein YGR023w -
yeast (Saccharomyces cerevisiae), partial (7%)
Length = 774
Score = 50.1 bits (118), Expect = 1e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = -2
Query: 279 PFLAVLKDCLCILENNEGDNRFLVWQMKKFGVHNSWIQLY 318
P+L VL DCLC L ++ G F++WQMK+FGV SW +L+
Sbjct: 761 PYLRVLLDCLCFL-HDLGKTEFVIWQMKEFGVRESWTRLF 645
>BG586574
Length = 732
Score = 48.9 bits (115), Expect = 3e-06
Identities = 35/95 (36%), Positives = 53/95 (54%), Gaps = 11/95 (11%)
Frame = +1
Query: 234 ISGTLNWE--VKTDNYT--FIIVSLDLGTEEYSQ-----LSLPYSPLYGE-DFEFPFLAV 283
++ TLNW ++ + +I+SLDLGTE Y+Q +SL S + + P +++
Sbjct: 1 LNSTLNWLGFIQDGDLAPQLVIISLDLGTETYTQFLPPPISLDLSHVLQKVSHAKPGVSM 180
Query: 284 LKDCLCILEN-NEGDNRFLVWQMKKFGVHNSWIQL 317
L D LC + NE D F++W+M KFG SW QL
Sbjct: 181 LMDSLCFYHDLNETD--FVIWKMTKFGDEKSWAQL 279
>TC84654
Length = 605
Score = 46.6 bits (109), Expect = 1e-05
Identities = 30/70 (42%), Positives = 41/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 250 IIVSLDLGTEEYSQLSLPYSPLYGE-DFEFPFLAVLKDCLCILENNEGDNRFLVWQMKKF 308
+IVSLDL E Y L P +GE + E L VL DC+C+L ++ + VW MK+F
Sbjct: 13 VIVSLDLENESYRALLFPD---FGEMNVEALTLEVLMDCMCLLCHSGTFSD--VWVMKEF 177
Query: 309 GVHNSWIQLY 318
G NSW +L+
Sbjct: 178 GNENSWARLF 207
>BG646382
Length = 603
Score = 42.7 bits (99), Expect(2) = 3e-05
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 279 PFLAVLKDCLCILENNEGDNRFLVWQMKKFGVHNSWIQLY 318
P L VL DCLC + + F++WQMK+FG SW QL+
Sbjct: 231 PSLRVLMDCLCFSHDFKR-TEFVIWQMKEFGSQESWTQLF 347
Score = 21.9 bits (45), Expect(2) = 3e-05
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 250 IIVSLDLGTEEY 261
+IVSLDL TE Y
Sbjct: 146 VIVSLDLSTETY 181
>CB893854
Length = 760
Score = 45.1 bits (105), Expect = 4e-05
Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 22/174 (12%)
Frame = +2
Query: 168 RFLYSSFGFGYDCMNDTYKVVAVAVSCFREHKE------------------ERVVKVYDM 209
+F+ + GFGYD + D YK++ E++E E + ++Y +
Sbjct: 122 KFVVNPLGFGYDIVRDDYKLIRCVGYFNLEYEECEELGISWSDAPWKDLSYEYLWEIYSL 301
Query: 210 GGSFWRNI---QSFPVSLSHISQLGVYISGTLNWEVKTDNYTFI-IVSLDLGTEEYSQLS 265
+ WR + S S+I+ + +Y + +W Y + + S DL E +
Sbjct: 302 KSNTWRKLDVNDSACSCFSNIAGVRLYTNEMCHWWQYGKKYDGVEVESFDLRNEVFFTTL 481
Query: 266 LPYSPLYGEDFEFPFLAVLKDCLCILENNEGDNRFLVWQMKKFGVHNSWIQLYN 319
+P +Y + ++ L + + G F + + + GV SW +LY+
Sbjct: 482 VPLGDVYSKSL---YMVGLNGSIAFISWTSGTTTFDISILCEIGVKESWTKLYS 634
>TC91947 similar to GP|8096410|dbj|BAA95880.1 hypothetical protein {Oryza
sativa (japonica cultivar-group)}, partial (6%)
Length = 872
Score = 34.7 bits (78), Expect(2) = 6e-05
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 216 NIQSFPVSLSHISQLGVYISGTLNWEVKTDNYT---FIIVSLDLGTEEYSQL 264
N FPV S G+Y+SGTLNW + D +I+S+DL E Y ++
Sbjct: 396 NSFEFPV*TS-----GIYVSGTLNWIIA*DGVNSNQLVIISVDLEKETYGEV 536
Score = 28.9 bits (63), Expect(2) = 6e-05
Identities = 26/86 (30%), Positives = 41/86 (47%)
Frame = +2
Query: 107 STV*LESATAWFLKSYGTL*SLFSSVQLVGFVHLFGSVSGTQLQGYGLDRPQL*ISEIVL 166
S+V +E+A +KSY S F QL+ + + L L P *I ++
Sbjct: 128 SSVPMEAA----VKSYHIKPSQFIVHQLLFIPLVLLCLYHKLLYNIRLWNPFY*IEIQII 295
Query: 167 VRFLYSSFGFGYDCMNDTYKVVAVAV 192
+ + GFGYD +ND YKV+ + +
Sbjct: 296 SKDCITHHGFGYDQVNDKYKVLYIVL 373
>TC85359 weakly similar to PIR|C96592|C96592 hypothetical protein T7N22.2
[imported] - Arabidopsis thaliana, partial (7%)
Length = 1955
Score = 43.5 bits (101), Expect = 1e-04
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
Frame = +2
Query: 175 GFGYDCMNDTYKVVAVAVSCFREHKE---ERVV-KVYDMGGSFWRNIQSFPVSLSHISQL 230
GFG+ + YKV+ + R + ERVV +++ +G WR ++ P +S + L
Sbjct: 1055 GFGFQPKTNEYKVIIMWNKYVRRNNRLVFERVVLEIHTLGTPSWRKVEVDP-QISFLKLL 1231
Query: 231 G-VYISGTLNWEVKTDNYTFIIVSLDLGTEEYSQLSLPYSPLYGEDFEFPF-----LAVL 284
++G L+W + I+ + +E P D FP L L
Sbjct: 1232 NPTCVNGALHWIIFETGQQKSILCFNFESERLQSFPSPPHVFGNHDNGFPLSMPIRLGEL 1411
Query: 285 KDCLCILENNEGDNRFLVWQMKKFGVHNSWIQLYN 319
K L I + +N +W M ++G+ SW +Y+
Sbjct: 1412 KGFLYICHISSLEN-VTMWVMNEYGIGESWTIVYS 1513
>TC91763 similar to GP|10177628|dbj|BAB10775.
gb|AAF30317.1~gene_id:K6M13.17~similar to unknown
protein {Arabidopsis thaliana}, partial (38%)
Length = 709
Score = 43.1 bits (100), Expect = 1e-04
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +2
Query: 214 WRNIQSFPVSLSHISQLG----VYISGTLNWEVKTDNYTFIIVSLDLGTEEYSQLSLPYS 269
WR + SF H + + V+++ L+W + +Y I+ LDL + + ++SLPY
Sbjct: 11 WRKLISFQDE--HFTHMNKNQVVFVNNALHWLTVSSSY---ILVLDLSCDIWRKMSLPYD 175
Query: 270 PLYGEDFEFPFLAVLKDCLCILENNEGDNRFLVWQMKKF 308
P+YG +L L CL +++ +E ++W +K +
Sbjct: 176 PIYGAG-NRTYLLELDGCLSVIQISEA--WMVIWVLKDY 283
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.330 0.141 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,937,796
Number of Sequences: 36976
Number of extensions: 181540
Number of successful extensions: 1180
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of query: 319
length of database: 9,014,727
effective HSP length: 96
effective length of query: 223
effective length of database: 5,465,031
effective search space: 1218701913
effective search space used: 1218701913
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0587.7