BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0559.7
(442 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC82743 weakly similar to GP|17065596|gb|AAL33778.1 unknown prot... 311 2e-85
AL367726 similar to GP|17065596|gb| unknown protein {Arabidopsis... 125 2e-29
TC82470 homologue to GP|23497460|gb|AAN37003.1 hypothetical prot... 39 0.003
AJ499220 similar to SP|Q09863|YAF Hypothetical protein C29E6.10c... 39 0.004
TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity... 39 0.005
TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidops... 38 0.007
TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein... 37 0.015
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 37 0.015
TC93023 similar to GP|22135799|gb|AAM91086.1 At1g45261/F2G19.1 {... 37 0.020
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 37 0.020
TC86622 weakly similar to GP|20197623|gb|AAM15156.1 putative myo... 37 0.020
TC81250 similar to GP|2313800|gb|AAD07739.1| H. pylori predicted... 37 0.020
TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ... 36 0.026
TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone d... 36 0.034
TC77438 homologue to PIR|T06807|T06807 nucleosome assembly prote... 35 0.044
TC88983 similar to SP|P93231|VP41_LYCES Vacuolar assembly protei... 35 0.044
TC78661 similar to PIR|T09886|T09886 hypothetical protein T22A6.... 35 0.058
TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown prot... 35 0.058
TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Ar... 35 0.075
BF641220 weakly similar to PIR|G86203|G86 probable N-arginine di... 35 0.075
>TC82743 weakly similar to GP|17065596|gb|AAL33778.1 unknown protein
{Arabidopsis thaliana}, partial (24%)
Length = 820
Score = 311 bits (798), Expect = 2e-85
Identities = 173/253 (68%), Positives = 201/253 (79%), Gaps = 3/253 (1%)
Frame = +1
Query: 1 MVEEAP-ASETSVSMA-PSEEAVAVDGTLNPSEHGKSEITNGATVDSAAIGGAESASNAE 58
MVEE P ASETSV+M P+E VDGTLN + NG TV+++ A SA +
Sbjct: 91 MVEETPTASETSVTMPQPTEPVTVVDGTLNLDK-------NGTTVNASVESAATSAPASS 249
Query: 59 TSGKNSLELAVELMDKGTKAMKEDDFGEAAENFSRALEIRVANYGELAPECVNTYYKYGC 118
T G+ SL+LA ELM+KG KAMKE+DFGEAA+N+SRALEIRVA+YGELAPECV+TYYKYGC
Sbjct: 250 TEGQKSLDLANELMEKGNKAMKENDFGEAADNYSRALEIRVAHYGELAPECVHTYYKYGC 429
Query: 119 ALLYKAQEEADPLGDVPKKQEGSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASND 178
ALLYKAQEEADPLG VPKKQEGS HGS KDE VK +N AESST ASF+SN EQD+ SN+
Sbjct: 430 ALLYKAQEEADPLGAVPKKQEGSPHGSDKDEPVKGAVN-AESST-ASFASNVEQDVTSNN 603
Query: 179 QESAVDDESTKNYQEEDDEDSDAED-TEADEDESDLDLAWKMLDIARAIVEKQCVNTIEH 237
QES VD+ S KN +EDDEDSD E+ E DEDESDLDLAWKMLD+ARAIVEKQ V+T+
Sbjct: 604 QESEVDNVSGKN-DQEDDEDSDTEELAEGDEDESDLDLAWKMLDVARAIVEKQSVHTMGQ 780
Query: 238 VDILSTLAEISLE 250
VDILSTLA+++LE
Sbjct: 781 VDILSTLADVALE 819
>AL367726 similar to GP|17065596|gb| unknown protein {Arabidopsis thaliana},
partial (6%)
Length = 509
Score = 125 bits (315), Expect = 2e-29
Identities = 72/101 (71%), Positives = 81/101 (79%), Gaps = 2/101 (1%)
Frame = +3
Query: 344 SNPKSTLSELLEKVAAKAGGGKESIPAKVSSSQLATANSSGGFDSPTISTAHSNGSAAGV 403
+NPKS L+E+L +AKAG GKE A+VSSSQLAT NSSG FDSPTISTAH+NGS AGV
Sbjct: 3 ANPKSILAEIL--ASAKAGSGKEPSLARVSSSQLATENSSGSFDSPTISTAHTNGS-AGV 173
Query: 404 THLGVVGRGVKRTS--LAPEASAPKKPALESTEGKGDSGSA 442
THLGVVGRGVKR+S EAS KKPALE+TE KGD G+A
Sbjct: 174 THLGVVGRGVKRSSNTSTTEASISKKPALETTEEKGDGGNA 296
>TC82470 homologue to GP|23497460|gb|AAN37003.1 hypothetical protein
{Plasmodium falciparum 3D7}, partial (8%)
Length = 1064
Score = 39.3 bits (90), Expect = 0.003
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 7/183 (3%)
Frame = +2
Query: 191 YQEEDDEDSDAEDTEADEDESDLDLAWKMLDIARAIVEK-----QCVNTIEHVDILSTLA 245
Y ++DD+D D +D + D+D+ D ++ L +VEK + +E + S
Sbjct: 32 YDDDDDDDDDDDDDDDDDDDMSTDKSFSTLKEKLVLVEKSFEDIRSKTQVEERRLQSIKR 211
Query: 246 EISLEREEFENSLSDYQKALSILEQLVDSKPEEAIAYCEKAASVCKARLDRLTNEVKSIT 305
+I E+ EN + + I+E K + I C K + +L + + +
Sbjct: 212 DIEECCEDLENKKKEIRDVGRIIE--ARKKMQGKIDECVKDFVAKEGQLGLMEDLIGE-- 379
Query: 306 PASEAKNKSIEDKQA--EIETLTGLSSDLENKLEDLQLLVSNPKSTLSELLEKVAAKAGG 363
E K K +E +Q I L S ++ + DL + +S + EL K G
Sbjct: 380 HKKELKTKELELRQVMDNISKQKELESQVKELVNDLVSKQKHFESHIKELESKERQLEGR 559
Query: 364 GKE 366
KE
Sbjct: 560 LKE 568
>AJ499220 similar to SP|Q09863|YAF Hypothetical protein C29E6.10c in
chromosome I. [Fission yeast] {Schizosaccharomyces
pombe}, partial (12%)
Length = 518
Score = 38.9 bits (89), Expect = 0.004
Identities = 42/171 (24%), Positives = 69/171 (39%), Gaps = 2/171 (1%)
Frame = -3
Query: 170 AEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEADE--DESDLDLAWKMLDIARAIV 227
AE+ + + ESA+D + E++DED ED E D +E ++ +M I A +
Sbjct: 504 AERRMQREEDESAMDRGEYYDEDEDEDEDEYEEDGEEDNQTEEQRMEEGRRMFQIFAARM 325
Query: 228 EKQCVNTIEHVDILSTLAEISLEREEFENSLSDYQKALSILEQLVDSKPEEAIAYCEKAA 287
+Q V + + LE E EN L + ++ L L++ K + +K
Sbjct: 324 FEQRVLNAYREKVAQERQQKLLEELEEENRLKE-ERELKKLKEKERKKAKNRALKQQKEE 148
Query: 288 SVCKARLDRLTNEVKSITPASEAKNKSIEDKQAEIETLTGLSSDLENKLED 338
+ +RL E A K E K+ E E L + + K D
Sbjct: 147 ERARREAERLAEE--KAQRAEREKKLEEERKRREEERLKKEAERRQRKKND 1
>TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity to
apoptosis antagonizing transcription
factor~gene_id:MFB13.10, partial (37%)
Length = 908
Score = 38.5 bits (88), Expect = 0.005
Identities = 41/179 (22%), Positives = 79/179 (43%), Gaps = 21/179 (11%)
Frame = +2
Query: 158 AESSTAASFSSNAEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDESDLDLAW 217
+ S+ + ++ D+ D + + ++ + + EE++E+ D E +EDE + W
Sbjct: 23 SRSAKKSKKMQKSDSDLDEYDDDMSFNEVNDDSEVEEEEEEDDEGSDEEEEDERQEESRW 202
Query: 218 KMLDIARAIVEKQCVNTIEHVDILSTLAEISLEREE--FENSLSDYQKAL--SILE---- 269
K D +EK+ ++ L+TL + ++E + QKAL ILE
Sbjct: 203 K--DDEMEQLEKEYMDLHHQEQELNTLKNLKHHKDEDLLKGQAVKTQKALWYKILELRFL 376
Query: 270 -----QLVDSKPEEAI--AYCEKAASVCKARLDRLTNEVKSITPASE------AKNKSI 315
+ P+E+I ++CE +V A D +T+ +++ E AKN S+
Sbjct: 377 LQKPFSNSNRLPQESIKESFCESDETVRGAYEDLITSSKETLDSILELQEALIAKNPSV 553
>TC81158 similar to GP|9280664|gb|AAF86533.1| F21B7.15 {Arabidopsis
thaliana}, partial (6%)
Length = 890
Score = 38.1 bits (87), Expect = 0.007
Identities = 26/92 (28%), Positives = 46/92 (49%), Gaps = 4/92 (4%)
Frame = +1
Query: 123 KAQEEADPLGDVPKKQ----EGSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASND 178
K+ E GD P + E GS + +S+ + +ESST++S +S ++ D +D
Sbjct: 343 KSVERITLTGDPPSVEVNGNEDKDDGSEGESESESSESESESSTSSSSTSGSDSD--EDD 516
Query: 179 QESAVDDESTKNYQEEDDEDSDAEDTEADEDE 210
++ A D+E + +E A D + D+DE
Sbjct: 517 EDDAEDEEEGQISDDEKMVTWSAADGDLDDDE 612
>TC80288 weakly similar to PIR|T06029|T06029 hypothetical protein T28I19.100
- Arabidopsis thaliana, partial (14%)
Length = 1460
Score = 37.0 bits (84), Expect = 0.015
Identities = 71/311 (22%), Positives = 120/311 (37%), Gaps = 13/311 (4%)
Frame = +3
Query: 138 QEGSQHGSSKDESVKSTINAAESS--TAASFSSNAEQDIASNDQESAVDDESTKNYQEED 195
+E ++HG+ E +S E ++ E+ A ND+E V DE K+ +EE
Sbjct: 552 EEENKHGAEVQEENESKSEEVEDEGGDVEIDENDHEKSEADNDREDEVVDEE-KDKEEEG 728
Query: 196 DEDSDAEDTEADEDESDLDLAWKMLDIARAIVEKQCVNTIEHVDILSTLAEISLEREEFE 255
D++++ ED E DE++ L VE + + A ++ + E
Sbjct: 729 DDETENEDKE-DEEKGGL-------------VENHENHEAREEHYKADDASSAVAHDTHE 866
Query: 256 NSLSDYQKALSILEQLVDSKPEEAI-----AYCEKAASVCKARLDRLTNEVKS-ITPASE 309
S S L KPE +Y + S K LT+ V S T E
Sbjct: 867 TSTETGNLEHSDLSLQNTRKPENETNHSDESYGSQNVSDLKVTEGELTDGVSSNATAGKE 1046
Query: 310 AKNKSIEDKQAEIETLTGLSSDLENKLEDLQLLVSNPKSTLSELLEKVAAKAGGGKESIP 369
N S ++ A+ + + L DL + +L +++ S S + ++ + K I
Sbjct: 1047TGNDSFSNETAKTKPDSQL--DLSS---NLTAVITEASSNSSGTGDDTSSSSEQIKAVIL 1211
Query: 370 AKVSSSQLATANSSGGFDSPTISTAHSNGSAAGVTHLG-----VVGRGVKRTSLAPEASA 424
++ +Q AT N++ D +GS +L V + R + E+S
Sbjct: 1212SESDHAQNATVNTTITGDMKQTEGLEQSGSKISEGNLPGNDSIVSVKPESRVAAPEESST 1391
Query: 425 PKKPALESTEG 435
ALE T G
Sbjct: 1392LGASALEKTTG 1424
Score = 36.2 bits (82), Expect = 0.026
Identities = 62/284 (21%), Positives = 108/284 (37%), Gaps = 6/284 (2%)
Frame = +3
Query: 125 QEEADPLGDVPKKQEGSQHGSSKDESVKSTINAAESSTAASFSSNAE-QDIASNDQESAV 183
+EE + V Q +H + E + + E + + E QD N + V
Sbjct: 402 EEEEEDEHIVYNMQNKREHDEQQQEGEEGNKHETEEESEDNVHERREEQDEEENKHGAEV 581
Query: 184 DDESTKNYQEEDDEDSDAEDTEADEDESDLDLAWKMLDIARAIVEKQCVNTIEHVDILST 243
+E+ +E +DE D E E D ++S+ D D +V+++ E D
Sbjct: 582 QEENESKSEEVEDEGGDVEIDENDHEKSEAD-----NDREDEVVDEEKDKEEEGDD---- 734
Query: 244 LAEISLEREEFENSLSDYQKALSILEQLVDSKPEEAIAYCEKAASVCKARLDRLTNEVKS 303
E EN + ++ ++E + + E + A+S + T+E +
Sbjct: 735 ---------ETENEDKEDEEKGGLVENHENHEAREEHYKADDASSA----VAHDTHETST 875
Query: 304 ITPASEAKNKSIED-KQAEIETLTGLSSDLENKLEDLQLLVSNPKSTLSELLEKVAAKAG 362
T E + S+++ ++ E ET S + DL K T EL + V++ A
Sbjct: 876 ETGNLEHSDLSLQNTRKPENETNHSDESYGSQNVSDL-------KVTEGELTDGVSSNAT 1034
Query: 363 GGKESIPAKVSSSQLATANSS----GGFDSPTISTAHSNGSAAG 402
GKE+ S+ T S + I+ A SN S G
Sbjct: 1035AGKETGNDSFSNETAKTKPDSQLDLSSNLTAVITEASSNSSGTG 1166
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 37.0 bits (84), Expect = 0.015
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Frame = +3
Query: 138 QEGSQHGSSKDESVKSTINAAE----SSTAASFSSNAEQDIASNDQESAVDDESTKNYQE 193
++G+ +D+ E S + +N+ S + +N +E
Sbjct: 420 EDGNDDEDEEDDDGDGAFGEGEDELSSEDGGGYGNNSNNKSNSKKAPEGGAGGADENGEE 599
Query: 194 EDDEDSDAEDTEADEDESDLD 214
EDDED D +D + DEDE D D
Sbjct: 600 EDDEDGDDQDEDDDEDEDDDD 662
Score = 34.3 bits (77), Expect = 0.099
Identities = 21/86 (24%), Positives = 37/86 (42%), Gaps = 6/86 (6%)
Frame = +3
Query: 133 DVPKKQEGSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQ 192
D ++G +G++ + S A E + + E+D D + DDE +
Sbjct: 486 DELSSEDGGGYGNNSNNKSNSK-KAPEGGAGGADENGEEEDDEDGDDQDEDDDEDEDDDD 662
Query: 193 EE------DDEDSDAEDTEADEDESD 212
EE ++E D ED E +E++ D
Sbjct: 663 EEEGGEEDEEEGVDEEDNEEEEEDED 740
Score = 28.9 bits (63), Expect = 4.1
Identities = 13/31 (41%), Positives = 20/31 (63%)
Frame = +3
Query: 171 EQDIASNDQESAVDDESTKNYQEEDDEDSDA 201
E++ D+E VD+E N +EE+DED +A
Sbjct: 663 EEEGGEEDEEEGVDEED--NEEEEEDEDEEA 749
>TC93023 similar to GP|22135799|gb|AAM91086.1 At1g45261/F2G19.1 {Arabidopsis
thaliana}, partial (57%)
Length = 728
Score = 36.6 bits (83), Expect = 0.020
Identities = 20/76 (26%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 153 STINAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQEEDDEDS-DAEDTEADEDES 211
S++ A SS++ + ++ + + S + V+++S+ +YQ+E++EDS D ED D ++
Sbjct: 231 SSLKVASSSSSEAQNNLQGKPVLSQGKGGIVEEQSSYSYQQEEEEDSTDEEDKWVDWEDQ 410
Query: 212 DLDLAWKMLDIARAIV 227
L+ ++ R I+
Sbjct: 411 ILEDTVPLVGFVRTIL 458
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 36.6 bits (83), Expect = 0.020
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +1
Query: 136 KKQEGSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQEED 195
+ ++GS+ DE +N + FS + + + A + + + + +ED
Sbjct: 286 ENKDGSETEDDDDEDDDDDVNDEDDDNDEDFSGDEDDEDADPEDDPVPNGAGGSDDDDED 465
Query: 196 DED-----SDAEDTEADEDESD 212
D+D D ED + DE+E D
Sbjct: 466 DDDDDDDNDDGEDEDEDEEEDD 531
Score = 30.4 bits (67), Expect = 1.4
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Frame = +1
Query: 148 DESVKSTINAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQ-EEDDEDSDAEDTEA 206
D+ K E+ + + ++D +D + DD++ +++ +EDDED+D ED
Sbjct: 253 DQLSKGNHTCEENKDGSETEDDDDED--DDDDVNDEDDDNDEDFSGDEDDEDADPEDDPV 426
Query: 207 --------DEDESDLD 214
D+DE D D
Sbjct: 427 PNGAGGSDDDDEDDDD 474
>TC86622 weakly similar to GP|20197623|gb|AAM15156.1 putative myosin heavy
chain {Arabidopsis thaliana}, partial (17%)
Length = 2546
Score = 36.6 bits (83), Expect = 0.020
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 10/235 (4%)
Frame = +3
Query: 147 KDESVKSTINAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEA 206
KDE+VK + + ++ N E + S +DD + N + + + E
Sbjct: 1254 KDETVKEILASKNAAEDLVTQHNEEVQTLKSQISSVIDDRNLLN-ETNQNLKKELESIIL 1430
Query: 207 DEDESDLDLAWKMLDIARAIVEKQCVNTIEHVDILSTLAEISLEREEFENSLSD----YQ 262
D +E L K D ++ VE + E + S L EI + + E+ L + Q
Sbjct: 1431 DLEEK-LKEHQKNEDSLKSEVETLKIEIAEKSALQSRLHEIEAQLAKAESRLHEEVGSVQ 1607
Query: 263 KALSILEQLVDSKPEEAIAYCEKAA--SVCKARLDRLTNEVKSITPASEAKNKSIEDKQA 320
A S E + SK E+ Y +K + +V ++ L E+ + + A K E ++
Sbjct: 1608 AAASQREVDLSSKFED---YEQKISEINVLNGKVAELEKEL-HLAQDTIANQKGEESQKL 1775
Query: 321 EIE-TLTGLSSDLENKLEDLQLL---VSNPKSTLSELLEKVAAKAGGGKESIPAK 371
E+E L +LE K ++ LL V + L + EK++ K G+E++ K
Sbjct: 1776 ELEAALKNSVEELETKKNEISLLQKQVIEFEQKLQQADEKISVK---GEEAVDKK 1931
>TC81250 similar to GP|2313800|gb|AAD07739.1| H. pylori predicted coding
region HP0673 {Helicobacter pylori 26695}, partial (4%)
Length = 770
Score = 36.6 bits (83), Expect = 0.020
Identities = 37/149 (24%), Positives = 68/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 204 TEADEDESDLDLAWKMLDIARAIVEKQCVNTIEHVDILSTLAEISLER-EEFENSLSDYQ 262
+EA D + L ++LD+ + T+E + + + +L EEF++++
Sbjct: 54 SEATADPTTLSRLHQLLDLLS-------IRTVEVQESIGEFKKKALASFEEFQSTVDPVN 212
Query: 263 KALSILEQLVDSKPEEAIAYCEKAASVCKARLDRLTNEVKSITPASEAKNKSIEDKQAEI 322
K L E+ +D +E + K R + L N +K AS+ +N+ ++ +AEI
Sbjct: 213 K-LKNFEKQLDIIQQETVTG--------KDRRNDLKNLMKKAYMASKEENQRKKELEAEI 365
Query: 323 ETLTGLSSDLENKLEDLQLLVSNPKSTLS 351
L + E L+ L L + N + TLS
Sbjct: 366 AILKAQQATKETDLQQLVLNLKNKEDTLS 452
>TC76514 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
partial (61%)
Length = 1288
Score = 36.2 bits (82), Expect = 0.026
Identities = 31/131 (23%), Positives = 57/131 (42%), Gaps = 24/131 (18%)
Frame = +3
Query: 133 DVPKKQEGSQHGSSKDE--SVKSTINAAESSTAASFSSNAEQDIASNDQE--------SA 182
D E S+ +D+ + K++ N + + A+ SS+ E D S++ E +A
Sbjct: 735 DTESSDEDSESSDEEDKKPAAKASKNVSAPTKKAASSSDEESDEESDEDEDAKPVSKPAA 914
Query: 183 VDDESTKNYQEEDDEDSDAEDTE--------------ADEDESDLDLAWKMLDIARAIVE 228
V +S K+ + DDED D+ E D+D SD D + + + +
Sbjct: 915 VAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKEDKMNVDKDGSDSDQSEEESEDEPSKTP 1094
Query: 229 KQCVNTIEHVD 239
++ + +E VD
Sbjct: 1095QKKIKDVEMVD 1127
Score = 35.4 bits (80), Expect = 0.044
Identities = 26/102 (25%), Positives = 40/102 (38%), Gaps = 12/102 (11%)
Frame = +3
Query: 132 GDVPKK----QEGSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASNDQESAVDDE- 186
G VP K + + S DE K A + +A A +D+ES D++
Sbjct: 711 GSVPAKKADTESSDEDSESSDEEDKKPAAKASKNVSAPTKKAASSSDEESDEESDEDEDA 890
Query: 187 -------STKNYQEEDDEDSDAEDTEADEDESDLDLAWKMLD 221
+ ++D DSD ED ++ DE +A K D
Sbjct: 891 KPVSKPAAVAKKSKKDSSDSDDEDDDSSSDEDKKPVAAKKED 1016
Score = 29.3 bits (64), Expect = 3.2
Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 5/213 (2%)
Frame = +3
Query: 3 EEAPASETSVSMAPSEEAVAVDGTLNPSEHGKSEITNGATVDSAAIGGAESASNAETSGK 62
+E +SE S + V + K + ++ ++S+S+ E K
Sbjct: 282 KEESSSEESSESEDEQPVVKAPAPSKKTPAKKGNVKKAQPETTSEESDSDSSSSDEEEVK 461
Query: 63 NSLELAVELMDKGTKAMKEDDFGEAAENFSRALEIRVANYGELAPECVNTYYKYGCALLY 122
+ AV + A K D E S + + A + P K G A
Sbjct: 462 KPVSKAVPSKNGSAPAKKVDTSEEEDSEESSDEDKKPA--AKAVPS------KNGSAPAK 617
Query: 123 KA---QEEADPLGDVPKKQE--GSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASN 177
KA +E+ D D ++ E ++ SK+ SV + ESS S SS+ E +
Sbjct: 618 KAASDEEDTDESSDEDEEDEKPAAKAVPSKNGSVPAKKADTESSDEDSESSDEEDKKPAA 797
Query: 178 DQESAVDDESTKNYQEEDDEDSDAEDTEADEDE 210
V + K D+E + E+DEDE
Sbjct: 798 KASKNVSAPTKKAASSSDEESDE----ESDEDE 884
>TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone deacetylase
HD2-P39 {Glycine max}, partial (47%)
Length = 1233
Score = 35.8 bits (81), Expect = 0.034
Identities = 21/59 (35%), Positives = 31/59 (51%)
Frame = +2
Query: 156 NAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDESDLD 214
NAA + AA+ + + + D++S DDES DDE +A+ DED+SD D
Sbjct: 509 NAAPAKNAAT--AKHVKVVDPKDEDSDDDDESDDEIGSSDDEMENADSDSEDEDDSDED 679
Score = 31.2 bits (69), Expect = 0.83
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +2
Query: 135 PKKQEGSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQEE 194
PKK + +K+ + + + +++ D S+D+ + DDE +
Sbjct: 488 PKKADAKNAAPAKNAATAKHVKVVDPK-----DEDSDDDDESDDEIGSSDDEMENADSDS 652
Query: 195 DDEDSDAEDTEADEDESDLD 214
+DED ED E + +D
Sbjct: 653 EDEDDSDEDDEEETPVKKVD 712
>TC77438 homologue to PIR|T06807|T06807 nucleosome assembly protein 1 -
garden pea, partial (93%)
Length = 1607
Score = 35.4 bits (80), Expect = 0.044
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +2
Query: 139 EGSQHGSSKDESVKSTINAAESSTAASFSSNAEQDIASNDQESAVDDESTKNYQEEDDED 198
E Q+ +D + STI A S+ + + A ++ +DDE +DDED
Sbjct: 911 EELQNQMEQDYDIGSTIRDKIIPHAVSWFTG---EAAQGEEFGDLDDE-------DDDED 1060
Query: 199 SDAEDTEADEDESD 212
DAED + DEDE +
Sbjct: 1061DDAEDDDEDEDEDE 1102
>TC88983 similar to SP|P93231|VP41_LYCES Vacuolar assembly protein VPS41
homolog. [Tomato] {Lycopersicon esculentum}, partial
(17%)
Length = 668
Score = 35.4 bits (80), Expect = 0.044
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +2
Query: 184 DDESTKNYQEEDDEDSDAEDTEADEDESDLDLAWKML----DIARAIVEKQCVNTIEHVD 239
DDE ++ ++E++ED D E+ E D+DE + L ++ + A CV+ E +
Sbjct: 146 DDEREEDEEDEEEEDED-EEVEEDDDEEEPRLKYQRMGGSVPSLLATDAASCVSVAERMI 322
Query: 240 ILSTLAEISLEREEFENSLSDYQKALSILEQLVDSKPEEAIAYCEKAASV 289
L T A + N + ++ S++ L E I C +V
Sbjct: 323 ALGTQAGTIHILDFLGNQVKEFSAHASVVNDLSFDLEGEYIGSCSDDGTV 472
>TC78661 similar to PIR|T09886|T09886 hypothetical protein T22A6.60 -
Arabidopsis thaliana, partial (19%)
Length = 1116
Score = 35.0 bits (79), Expect = 0.058
Identities = 30/93 (32%), Positives = 43/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 141 SQHGSSKDESVKSTINAAESSTAAS--FSSNAEQDIASNDQESAVD--DESTKNYQEEDD 196
++H ++ V S+ AAES S ++AE + SN E V D+S + EE
Sbjct: 461 TEHNTTDATVVSSSNVAAESPPTNSDVAVADAEVEYGSNFVEETVTKGDDSVQQRNEECV 640
Query: 197 EDSDAEDTEADEDESDLDLAWKMLDIARAIVEK 229
E+ E EDE D W+ I R+ VEK
Sbjct: 641 EEIMEESLTEKEDEEKSDEEWEWEGIERSEVEK 739
>TC93070 weakly similar to GP|17065230|gb|AAL32769.1 Unknown protein
{Arabidopsis thaliana}, partial (19%)
Length = 679
Score = 35.0 bits (79), Expect = 0.058
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 176 SNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDESD 212
S+D+ +D E ++ E++DED D +D + DED+ D
Sbjct: 223 SDDEIEEMDFEDDEDEDEDEDEDDDDDDDDDDEDDDD 333
Score = 33.1 bits (74), Expect = 0.22
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 161 STAASFSS--NAEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDE 210
ST F S +++ +I D E DDE ++EDD+D D +D E D+D+
Sbjct: 190 STYGKFLSPYDSDDEIEEMDFE---DDEDEDEDEDEDDDDDDDDDDEDDDDD 336
Score = 30.4 bits (67), Expect = 1.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 185 DESTKNYQEEDDEDSDAEDTEADEDESDLD 214
D+ + EDDED D ++ E D+D+ D D
Sbjct: 226 DDEIEEMDFEDDEDEDEDEDEDDDDDDDDD 315
Score = 28.1 bits (61), Expect = 7.1
Identities = 13/43 (30%), Positives = 22/43 (50%)
Frame = +1
Query: 171 EQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDESDL 213
E D ++ E DD+ + E+DD+D AE T+ + + L
Sbjct: 253 EDDEDEDEDEDEDDDDDDDDDDEDDDDDGFAEPTDLNAKDKRL 381
>TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 761
Score = 34.7 bits (78), Expect = 0.075
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 11/52 (21%)
Frame = +3
Query: 172 QDIASNDQESAVDDESTKNYQEEDDEDSDAEDTE-----------ADEDESD 212
+D +D ++ DDE +N +EE+DED + EDT ADE++SD
Sbjct: 339 KDTKGSDNDN--DDEGKENEEEEEDEDEEEEDTSDDDGSESEEFNADEEDSD 488
>BF641220 weakly similar to PIR|G86203|G86 probable N-arginine dibasic
convertase [imported] - Arabidopsis thaliana, partial
(5%)
Length = 634
Score = 34.7 bits (78), Expect = 0.075
Identities = 17/46 (36%), Positives = 27/46 (57%), Gaps = 1/46 (2%)
Frame = +2
Query: 166 FSSNAEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEA-DEDE 210
+ A +D + ++ + DDE ++ +E+DDE D ED E DEDE
Sbjct: 326 YPEGAPKDGSIDEDDEEEDDEDEEDDEEDDDEGEDDEDEEXEDEDE 463
Score = 30.0 bits (66), Expect = 1.9
Identities = 15/44 (34%), Positives = 22/44 (49%)
Frame = +2
Query: 169 NAEQDIASNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDESD 212
N Q + +D E + +EDDE+ D ED E DE++ D
Sbjct: 287 NGLQALIVHDPEIYPEGAPKDGSIDEDDEEEDDEDEEDDEEDDD 418
Score = 29.6 bits (65), Expect = 2.4
Identities = 11/37 (29%), Positives = 22/37 (58%)
Frame = +2
Query: 176 SNDQESAVDDESTKNYQEEDDEDSDAEDTEADEDESD 212
S D++ +D+ + EEDD++ + ++ E EDE +
Sbjct: 353 SIDEDDEEEDDEDEEDDEEDDDEGEDDEDEEXEDEDE 463
Score = 29.3 bits (64), Expect = 3.2
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 179 QESAVDDESTKNYQEEDDEDSDAEDTEADEDESDLD 214
++ ++D++ +EEDDED + ++ + DE E D D
Sbjct: 344 KDGSIDEDD----EEEDDEDEEDDEEDDDEGEDDED 439
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.301 0.120 0.309
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,981,571
Number of Sequences: 36976
Number of extensions: 94724
Number of successful extensions: 1087
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of query: 442
length of database: 9,014,727
effective HSP length: 99
effective length of query: 343
effective length of database: 5,354,103
effective search space: 1836457329
effective search space used: 1836457329
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0559.7