TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0550.1
         (1631 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76591 similar to PIR|B85063|B85063 hypothetical protein AT4g05...    94  3e-26
TC89622 similar to GP|5734587|emb|CAB52797.1 putative external r...   108  1e-23
BG646490 similar to GP|12323094|g unknown protein; 5864-31259 {A...    67  7e-11
TC79070 similar to PIR|T02486|T02486 hypothetical protein At2g29...    60  5e-09
CB894466 similar to PIR|B84782|B84 probable receptor-like protei...    35  0.31
TC77663 similar to GP|12744987|gb|AAK06873.1 unknown protein {Ar...    31  3.4
TC80005 similar to GP|15809950|gb|AAL06902.1 AT4g22740/T12H17_13...    30  7.7
TC89356 similar to GP|19911207|dbj|BAB86930. glucosyltransferase...    30  7.7
TC77096 similar to PIR|T05572|T05572 glucose-6-phosphate isomera...    30  7.7

>TC76591 similar to PIR|B85063|B85063 hypothetical protein AT4g05020
           [imported] - Arabidopsis thaliana, partial (87%)
          Length = 2283

 Score = 93.6 bits (231), Expect(2) = 3e-26
 Identities = 43/55 (78%), Positives = 51/55 (92%)
 Frame = +1

Query: 888 RLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQRDGIDVKTGSVVVKSTD 942
           ++YPG+KD+VKITLLEAG HILSMFDKRIT FA+DKF+RDGIDVKTGS+V K +D
Sbjct: 877 QIYPGVKDLVKITLLEAGGHILSMFDKRITTFAEDKFKRDGIDVKTGSMVTKVSD 1041



 Score = 45.1 bits (105), Expect(2) = 3e-26
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = +2

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIK 894
           GGPTGVEFAA+LHDFV+EDLV+   G K
Sbjct: 815 GGPTGVEFAAALHDFVSEDLVKYTLG*K 898


>TC89622 similar to GP|5734587|emb|CAB52797.1 putative external
           rotenone-insensitive NADH dehydrogenase {Solanum
           tuberosum}, partial (47%)
          Length = 1078

 Score =  108 bits (271), Expect = 1e-23
 Identities = 48/76 (63%), Positives = 65/76 (85%)
 Frame = +2

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQR 926
           GGPTGVEFAA LHDF+ EDL++LYP ++D +KITL+++GDHIL+MFD+RI++FA+ KF R
Sbjct: 755 GGPTGVEFAAELHDFIQEDLIKLYPTVQDKIKITLIQSGDHILNMFDERISSFAEKKFTR 934

Query: 927 DGIDVKTGSVVVKSTD 942
           DGI+V+TG  V+   D
Sbjct: 935 DGIEVQTGCRVMSVDD 982


>BG646490 similar to GP|12323094|g unknown protein; 5864-31259 {Arabidopsis
           thaliana}, partial (4%)
          Length = 702

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
 Frame = +3

Query: 736 RFDLVLSDVSAFLFDGDYHWSEISV----------NKLTHSTNTSFFPIIDRCGVILQLQ 785
           RF +   D++AF  D    +   S+          N  T     + + ++DRCG+ + + 
Sbjct: 6   RFYITGRDIAAFFTDCGSDFGSCSLVKPNYDSQIMNSSTTQKEENVYSLLDRCGMAVLVN 185

Query: 786 QILLETPYYPSTRLAVRLPSLAFHFSPARYHRLMHVIKIF--------EEGDDGSSEFLR 837
           QI +  P YPST +++++P+L  H S  RY R+M ++ I         +   D     L 
Sbjct: 186 QIKVPHPSYPSTLISIQVPNLGIHLSSERYFRIMELLNILYQTMEICSQPASDSFQSKLT 365

Query: 838 PWNQADLEGWLSLLTWK 854
           PW  ADL     +L WK
Sbjct: 366 PWGPADLATDGRILVWK 416


>TC79070 similar to PIR|T02486|T02486 hypothetical protein At2g29990
           [imported] - Arabidopsis thaliana, partial (64%)
          Length = 1419

 Score = 60.5 bits (145), Expect = 5e-09
 Identities = 29/70 (41%), Positives = 45/70 (63%)
 Frame = +1

Query: 867 GGPTGVEFAASLHDFVNEDLVRLYPGIKDIVKITLLEAGDHILSMFDKRITAFADDKFQR 926
           GGPTGVEF+  L DF+  D+ + Y  +KD + +TL+EA + ILS FD R+  +A ++  +
Sbjct: 211 GGPTGVEFSGELSDFIMRDVRQRYAHVKDYIHVTLIEANE-ILSSFDDRLRHYATNQLTK 387

Query: 927 DGIDVKTGSV 936
            G+ +  G V
Sbjct: 388 SGVRLVRGIV 417


>CB894466 similar to PIR|B84782|B84 probable receptor-like protein kinase
            [imported] - Arabidopsis thaliana, partial (36%)
          Length = 871

 Score = 34.7 bits (78), Expect = 0.31
 Identities = 18/66 (27%), Positives = 35/66 (52%), Gaps = 6/66 (9%)
 Frame = +3

Query: 1168 IYDQNSTRYNNIDKQVIVTLATLTFFC------RRPTILAIMEFINSINIENGNLATSSD 1221
            ++DQ   RY NI+++ +V++  +   C      +RPT++ +++ I  I +E   L    D
Sbjct: 564  VFDQELLRYKNIEEE-LVSMLHVGLACVVQQPEKRPTMVDVVKMIEDIRVEQSPLCEDYD 740

Query: 1222 SSSTSM 1227
             S  S+
Sbjct: 741  ESRNSL 758


>TC77663 similar to GP|12744987|gb|AAK06873.1 unknown protein {Arabidopsis
           thaliana}, partial (11%)
          Length = 1286

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
 Frame = +3

Query: 100 EDAVQEAKKIRIEEMELKLWEKSQQLK-----SEMKTINPSSQGSA 140
           E+ ++E +K+R EE ELK   K ++ K     S+MKT N S   S+
Sbjct: 369 EELLRELEKVRAEEKELKKKMKQEKKKAKLKPSKMKTCNKSESSSS 506


>TC80005 similar to GP|15809950|gb|AAL06902.1 AT4g22740/T12H17_130
           {Arabidopsis thaliana}, partial (30%)
          Length = 1138

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 22/71 (30%), Positives = 32/71 (44%)
 Frame = +1

Query: 435 KEIEDLDHELDIELILQWRMLAHKFVEQSAEPNLSVRKQKAGNSWWSFGWTGKSPKEDSE 494
           KE++  D ++D            KF+  S EP++        N W S G T K+ +  SE
Sbjct: 295 KELDSDDEDID--------SFDEKFLRSSMEPSVEHPDDDDVNDWKSSGVTHKNDRHKSE 450

Query: 495 ELSFSEEDWNR 505
           E S   +D NR
Sbjct: 451 EHS---KDHNR 474


>TC89356 similar to GP|19911207|dbj|BAB86930. glucosyltransferase-12 {Vigna
           angularis}, partial (58%)
          Length = 1642

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -3

Query: 683 SLDLDIAAPKITIPTDFYP-DNTHATKLLLDLGNLMIRTQDDSRQE 727
           SL + +  PK+T  TDF   +++HA ++L  L  L++  +DD   +
Sbjct: 947 SLFIGVVLPKLTYITDFNG*ESSHAMQVLSTLKKLLLEKKDDGNDD 810


>TC77096 similar to PIR|T05572|T05572 glucose-6-phosphate isomerase (EC
            5.3.1.9) - Arabidopsis thaliana, partial (89%)
          Length = 2494

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 1455 FQWIGGSKSEINAVHLETLMVQVEDINLNVGTGTDLGESIIKDVNGLSVI 1504
            F W+GG  SE++AV L    +Q  DI   +     LG S++ + N  +VI
Sbjct: 1109 FDWVGGRTSEMSAVGLLPAALQTIDIREML-----LGASLMDEANRSTVI 1243


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.134    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,808,520
Number of Sequences: 36976
Number of extensions: 612595
Number of successful extensions: 2942
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of query: 1631
length of database: 9,014,727
effective HSP length: 109
effective length of query: 1522
effective length of database: 4,984,343
effective search space: 7586170046
effective search space used: 7586170046
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)