BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0545.2
(653 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapi... 42 7e-04
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel... 39 0.005
BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus... 39 0.006
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 38 0.011
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un... 38 0.014
AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.... 37 0.024
TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot... 37 0.031
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 37 0.031
TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot... 36 0.041
BQ752016 homologue to GP|18376006|em probable ATP citrate lyase ... 35 0.070
AW685995 similar to PIR|I51618|I516 nucleolar phosphoprotein - A... 35 0.070
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 35 0.070
TC93151 homologue to GP|22136928|gb|AAM91808.1 unknown protein {... 35 0.12
TC86826 similar to PIR|F96568|F96568 probable lipase 20450-2164... 34 0.16
BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania maj... 34 0.16
TC77172 similar to GP|20466472|gb|AAM20553.1 putative protein {A... 34 0.20
TC80942 GP|21112489|gb|AAM40721.1 conserved hypothetical protein... 33 0.26
TC87401 similar to PIR|B84587|B84587 probable glutaredoxin [impo... 33 0.26
TC86635 weakly similar to GP|9758600|dbj|BAB09233.1 gene_id:MDF2... 33 0.26
TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-... 33 0.35
>AW257087 homologue to GP|6683126|dbj KIAA0339 protein {Homo sapiens},
partial (2%)
Length = 466
Score = 42.0 bits (97), Expect = 7e-04
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Frame = +1
Query: 205 SPAKSASQREEMQQGGDQGVDQQASSPLQDTTSIPVEMA--QAKKTSGKRSSRKSGSSSS 262
S + S+S D D ++ +P + + + A AK S K S S
Sbjct: 1 SSSSSSSSSSSSSSSSDSDSDSESEAPAKKAVPVVTKTAPTHAKSASSKMEVDSDSDSDS 180
Query: 263 HHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLESSSSSLDSTE 322
S SS++SS + + V +K + S + SSSSS SSSSS S+
Sbjct: 181 DSSSSSSTSSSVSSVKKPAVSAAKATPAKKEESDSDSDSDSSSSSSSSSSSSSSSSSSSS 360
Query: 323 S 323
S
Sbjct: 361 S 363
Score = 39.3 bits (90), Expect = 0.005
Identities = 43/144 (29%), Positives = 55/144 (37%), Gaps = 7/144 (4%)
Frame = +1
Query: 204 PSPAKSASQREEMQQGGDQGVDQQASSPLQDTTSIPVEMA--QAKKTSGKRSSRKSGSSS 261
P+ AKSAS + E+ D D +SS + S + A AK T K+ S S S
Sbjct: 118 PTHAKSASSKMEVDSDSDSDSDSSSSSSTSSSVSSVKKPAVSAAKATPAKKEESDSDSDS 297
Query: 262 SHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLESSSSS---- 317
S SS+SSS +S SSSS SSSSS
Sbjct: 298 DSSSSSSSSSSSSSSS----------------------------SSSSSSSSSSSSNSDD 393
Query: 318 -LDSTESDPVWDKLTFYFNSKPIA 340
+ E+ PV K S P+A
Sbjct: 394 EEEEEEAKPVVKKTPAKSASTPVA 465
>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
herpesvirus 3}, partial (8%)
Length = 986
Score = 39.3 bits (90), Expect = 0.005
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Frame = -2
Query: 228 ASSPLQDTTSIPVEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKR------ 281
+SS ++S P + + +S SS S SSSS S SS+SSS +S P
Sbjct: 730 SSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSSPFSSAPPAPPSGAF 551
Query: 282 ------VGMSKMAVPRATWFSSKPPPIALSSSSSDLESSSSSLDSTES 323
+ + P + SS P P A S SSS SSSSSL S+ S
Sbjct: 550 FELLLLLELLPYPPPSSDDNSSSPSPNAPSPSSS--SSSSSSLPSSPS 413
Score = 32.3 bits (72), Expect = 0.59
Identities = 40/126 (31%), Positives = 50/126 (38%), Gaps = 3/126 (2%)
Frame = -2
Query: 250 GKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSS 309
G ++S S SSSS S SST SS SS PP + SSS
Sbjct: 757 GCKASSSSSSSSSSLSSSSTPSS-----------------------SSSSPPSSSSSS-- 653
Query: 310 DLESSSSSLDSTESDPVWDKLTFYFNSKPIAWQHPGCEPYYTKECRDNLSNFPP---QDM 366
SSSSS S+ S P + F+S P A P ++ L +PP D
Sbjct: 652 ---SSSSSSSSSWSSPSSSSSSSPFSSAPPA---PPSGAFFELLLLLELLPYPPPSSDDN 491
Query: 367 QNRPSP 372
+ PSP
Sbjct: 490 SSSPSP 473
>BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus
norvegicus}, partial (9%)
Length = 620
Score = 38.9 bits (89), Expect = 0.006
Identities = 51/194 (26%), Positives = 75/194 (38%), Gaps = 8/194 (4%)
Frame = +1
Query: 139 PIPRPTPQASPRVASATVEMEDDDDDDVALADKLKIPKTRKRGATPTTSAS--QKRAKGA 196
P+P P A SAT + D D+ + LK K +T T A+ K+A +
Sbjct: 43 PLPLPLTMAKSDKKSATAPEDVQTDLDL-VQSFLKQTGHDKAASTLTGFAAWATKQAAQS 219
Query: 197 GGSTVGNPSPAKSASQREEMQQGGDQGVD------QQASSPLQDTTSIPVEMAQAKKTSG 250
V S S S + G D D + S D++S + KK
Sbjct: 220 DAMDVDEKSSDSSDSDSSDSSDGSDSDSDASDDSDDSSDSSSDDSSSDEEPVPAPKKEKA 399
Query: 251 KRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSD 310
K++ + SSS S SS SS S P+ + ++ SS + SSS S
Sbjct: 400 KKAKKAKSVSSS--SDSSDDSSSESESEPEPXNVPLPESDDSSSASSDSDSSSDSSSDSS 573
Query: 311 LESSSSSLDSTESD 324
+SSS S + S+
Sbjct: 574 SDSSSXSDXDSSSE 615
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 38.1 bits (87), Expect = 0.011
Identities = 29/74 (39%), Positives = 37/74 (49%)
Frame = -2
Query: 248 TSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSS 307
+S SS S S SS S SS+SSS + P G + ++ SS +LSSS
Sbjct: 533 SSSSSSSSSSSSPSSLSSSSSSSSSSSSSLPPAPFGTGSSSGSASSSSSSPEKSSSLSSS 354
Query: 308 SSDLESSSSSLDST 321
SS SSSSS S+
Sbjct: 353 SSFTSSSSSSSSSS 312
Score = 37.4 bits (85), Expect = 0.018
Identities = 31/79 (39%), Positives = 38/79 (47%)
Frame = -2
Query: 245 AKKTSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIAL 304
+ +S SS S SS S S SS+SSS P G S + A+ SS P +
Sbjct: 536 SSSSSSSSSSSSSPSSLSSSSSSSSSSSSSLPPAPFGTGSSSGS---ASSSSSSPEKSSS 366
Query: 305 SSSSSDLESSSSSLDSTES 323
SSSS SSSSS S+ S
Sbjct: 365 LSSSSSFTSSSSSSSSSSS 309
Score = 33.9 bits (76), Expect = 0.20
Identities = 25/65 (38%), Positives = 29/65 (44%)
Frame = -2
Query: 259 SSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLESSSSSL 318
SSSS S SS+SSSP S S + S P P SSS SSSSS
Sbjct: 539 SSSSSSSSSSSSSSPSSLSSSSSSSSSSSS-------SLPPAPFGTGSSSGSASSSSSSP 381
Query: 319 DSTES 323
+ + S
Sbjct: 380 EKSSS 366
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/105 (26%), Positives = 41/105 (38%)
Frame = -2
Query: 168 LADKLKIPKTRKRGATPTTSASQKRAKGAGGSTVGNPSPAKSASQREEMQQGGDQGVDQQ 227
L + +K K RK PT +G S+ + S + S+S
Sbjct: 626 LLENIKCAKGRKNNL-PTILTHFFFLEGG*SSSSSSSSSSSSSSPSSLSSSSSSSSSSSS 450
Query: 228 ASSPLQDTTSIPVEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSSS 272
+ P T A + +S ++SS S SSS S SS+SSS
Sbjct: 449 SLPPAPFGTGSSSGSASSSSSSPEKSSSLSSSSSFTSSSSSSSSS 315
>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
protein {Arabidopsis thaliana}, partial (46%)
Length = 2077
Score = 37.7 bits (86), Expect = 0.014
Identities = 46/165 (27%), Positives = 69/165 (40%), Gaps = 12/165 (7%)
Frame = -2
Query: 185 TTSASQKRAKGAGGSTVGNPSPAKSASQREEMQQGGDQGVDQQA------------SSPL 232
+ S+S + + S++ N SPA S+S + + SS
Sbjct: 762 SASSSSSSSSSSSSSSISN-SPAFSSSSSSSLSSSASSLSSPFS*LSSSFSKYSVNSSIF 586
Query: 233 QDTTSIPVEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRA 292
++ +SIP + + +S SS SSSS S SS SSSP ++P
Sbjct: 585 KNLSSIPPPLTFSFSSSSSSSSSLPSSSSS--SSSSKSSSP--------------SLPPF 454
Query: 293 TWFSSKPPPIALSSSSSDLESSSSSLDSTESDPVWDKLTFYFNSK 337
+F S P + SSSSS SS SSL S+ + + F+ SK
Sbjct: 453 AFFFSTP---SKSSSSSSNSSSKSSLSSSSNSTRFFFSNFFPTSK 328
Score = 34.3 bits (77), Expect = 0.16
Identities = 41/127 (32%), Positives = 53/127 (41%), Gaps = 29/127 (22%)
Frame = -2
Query: 239 PVEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSS----SPLKASGPK-------------- 280
P KK+S S SSSS S SS+SS SP +S
Sbjct: 816 PFSFLPPKKSSYLTFPISSASSSSSSSSSSSSSSISNSPAFSSSSSSSLSSSASSLSSPF 637
Query: 281 ---RVGMSKMAVPRATW--FSSKPPPIAL-----SSSSSDLESSSSSLDSTE-SDPVWDK 329
SK +V + + SS PPP+ SSSSS L SSSSS S++ S P
Sbjct: 636 S*LSSSFSKYSVNSSIFKNLSSIPPPLTFSFSSSSSSSSSLPSSSSSSSSSKSSSPSLPP 457
Query: 330 LTFYFNS 336
F+F++
Sbjct: 456 FAFFFST 436
>AJ388952 similar to PIR|T04526|T045 hypothetical protein F16A16.160 -
Arabidopsis thaliana, partial (24%)
Length = 591
Score = 37.0 bits (84), Expect = 0.024
Identities = 31/75 (41%), Positives = 36/75 (47%), Gaps = 5/75 (6%)
Frame = +3
Query: 257 SGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVP---RATWFSSKPPPIALSSSSSDLES 313
S SSSS SK T +P+ S P S P RA SS P P + SSSSS S
Sbjct: 90 SSSSSSSISKIFTFYTPISTSSPIITNASSRRAPTFPRAMSSSSSPSPSSSSSSSSSSSS 269
Query: 314 SS--SSLDSTESDPV 326
SS S L+ T + V
Sbjct: 270 SSFGSRLEETIKNTV 314
>TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
{Homo sapiens}, partial (11%)
Length = 591
Score = 36.6 bits (83), Expect = 0.031
Identities = 31/104 (29%), Positives = 48/104 (45%), Gaps = 6/104 (5%)
Frame = +2
Query: 228 ASSPLQDTTSIPVEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKM 287
AS+ L ++SIP + ++ ++ R S ++ + SS +SSP S R
Sbjct: 161 ASASLTSSSSIPSQRSRTSRSPSSRPRHTSTGTAPPFAVSSPASSPTTPSS-TRSSPGST 337
Query: 288 AVPR--ATWFSSKPPPIALS----SSSSDLESSSSSLDSTESDP 325
+ PR +T FS++PPP S SS SS S+ S P
Sbjct: 338 STPRTPSTSFSARPPPSTPPPTPFRSRPTKGSSPSSTPSSSSPP 469
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 36.6 bits (83), Expect = 0.031
Identities = 26/69 (37%), Positives = 33/69 (47%)
Frame = -1
Query: 257 SGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLESSSS 316
S SSSS S SS+S S +S P S ++P P P+A SSS SS S
Sbjct: 559 SSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLP--------PAPLASGSSSGSPSSSPS 404
Query: 317 SLDSTESDP 325
S + + S P
Sbjct: 403 SPE*SSSSP 377
Score = 34.7 bits (78), Expect = 0.12
Identities = 26/71 (36%), Positives = 35/71 (48%)
Frame = -1
Query: 253 SSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLE 312
SS S SSSS S SS+SS +S P + + +A ++ S P SSSS
Sbjct: 550 SSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*SSSSPSS 371
Query: 313 SSSSSLDSTES 323
SSS + S+ S
Sbjct: 370 SSSCTSSSSSS 338
Score = 32.7 bits (73), Expect = 0.45
Identities = 29/83 (34%), Positives = 36/83 (42%), Gaps = 4/83 (4%)
Frame = -1
Query: 240 VEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSSS----PLKASGPKRVGMSKMAVPRATWF 295
V + + +S SS S SSSS S SS+ SS PL + S + P +
Sbjct: 562 VSSSSSSSSSSSSSSPSSSSSSSPSSSSSSPSSLPPAPLASGSSSGSPSSSPSSPE*SSS 383
Query: 296 SSKPPPIALSSSSSDLESSSSSL 318
S SSSSS SSS SL
Sbjct: 382 SPSSSSSCTSSSSSSSSSSSVSL 314
Score = 29.3 bits (64), Expect = 5.0
Identities = 26/85 (30%), Positives = 36/85 (41%), Gaps = 8/85 (9%)
Frame = -1
Query: 196 AGGSTVGNPSPAKSASQREEMQQGGDQGVDQQASSPLQDTTSIPVEMAQAKKTSGKRSSR 255
AGG V + S + S+S +SSP +S+P + +SG SS
Sbjct: 577 AGGWGVSSSSSSSSSSSSSSPSSSSSSSPSSSSSSP----SSLPPAPLASGSSSGSPSSS 410
Query: 256 KSG--------SSSSHHSKSSTSSS 272
S SSSS + SS+SSS
Sbjct: 409 PSSPE*SSSSPSSSSSCTSSSSSSS 335
>TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
{Homo sapiens}, partial (25%)
Length = 557
Score = 36.2 bits (82), Expect = 0.041
Identities = 30/77 (38%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 249 SGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGM--SKMAVPRATWFSSKPPPIALSS 306
+G +S S SS+S S SS+SSSP S P + S T + P P + SS
Sbjct: 316 AGGNTS*ASSSSTSSSSTSSSSSSPSSFSSPSSMSAAPSLRGSSCPTG*TRYPAPKSSSS 495
Query: 307 SSSDLESSSSSLDSTES 323
SSS SSSS S+ S
Sbjct: 496 SSSSNSPSSSSPSSSSS 546
>BQ752016 homologue to GP|18376006|em probable ATP citrate lyase subunit 1
{Neurospora crassa}, partial (37%)
Length = 759
Score = 35.4 bits (80), Expect = 0.070
Identities = 25/74 (33%), Positives = 33/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 239 PVEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSK 298
P M+ + RSSR S ++SS + SS S SPL P K +V + S
Sbjct: 527 PASMSPRPSKTCPRSSRPSTTASSRTAPSSPSLSPLSPRSPSTTRGPKSSVSSVSPLPSS 348
Query: 299 PP-PIALSSSSSDL 311
PP P + SS L
Sbjct: 347 PPSPTTVDRSSCTL 306
>AW685995 similar to PIR|I51618|I516 nucleolar phosphoprotein - African
clawed frog, partial (5%)
Length = 516
Score = 35.4 bits (80), Expect = 0.070
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 4/131 (3%)
Frame = +3
Query: 198 GSTVGNPSPAKSASQREEMQQGGDQGVDQQASSPLQDTTS---IPVEMAQ-AKKTSGKRS 253
G K Q+++ ++ V++ +SS + ++S P + A AKK + K+
Sbjct: 96 GKKAAKAEEEKKKQQKKKEEKPAPMEVEEDSSSSEESSSSEDEAPAKKAAPAKKAAAKKE 275
Query: 254 SRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLES 313
S SSS S+S P K + K+ SSS+ ES
Sbjct: 276 SSSEEESSSSESESEEEEKPAKKAAAKK------------------------ESSSEEES 383
Query: 314 SSSSLDSTESD 324
SSS +S E +
Sbjct: 384 SSSEEESDEEE 416
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 35.4 bits (80), Expect = 0.070
Identities = 27/69 (39%), Positives = 34/69 (49%)
Frame = -3
Query: 253 SSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLE 312
SS S SSSS S SS+SSS +S S + ++ SS + SSSS+
Sbjct: 247 SSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSSSSSSTSPS 68
Query: 313 SSSSSLDST 321
SSSS ST
Sbjct: 67 SSSSLCSST 41
Score = 35.4 bits (80), Expect = 0.070
Identities = 28/69 (40%), Positives = 34/69 (48%)
Frame = -3
Query: 253 SSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLE 312
SS SSSS S SS+SSS +S S + ++ SS SSSSS
Sbjct: 250 SSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSSSSSSTSP 71
Query: 313 SSSSSLDST 321
SSSSSL S+
Sbjct: 70 SSSSSLCSS 44
Score = 32.3 bits (72), Expect = 0.59
Identities = 28/76 (36%), Positives = 34/76 (43%)
Frame = -3
Query: 248 TSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSS 307
+S SS S SSSS S SS+SSS +S ++ SS SSS
Sbjct: 250 SSSSPSSSSSSSSSSSSSSSSSSSSSCSSSS-------------SSSSSSSSSSSCSSSS 110
Query: 308 SSDLESSSSSLDSTES 323
SS SSSSS + S
Sbjct: 109 SSSCSSSSSSTSPSSS 62
Score = 28.9 bits (63), Expect = 6.5
Identities = 26/73 (35%), Positives = 31/73 (41%)
Frame = -3
Query: 260 SSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSSSSSDLESSSSSLD 319
S S S SS+SSS +S S ++ SS + SSSSS SSSSS
Sbjct: 256 SISSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSSSSSSSSCSSSSSSSCSSSSSST 77
Query: 320 STESDPVWDKLTF 332
S S TF
Sbjct: 76 SPSSSSSLCSSTF 38
Score = 28.5 bits (62), Expect = 8.5
Identities = 23/90 (25%), Positives = 36/90 (39%)
Frame = -3
Query: 200 TVGNPSPAKSASQREEMQQGGDQGVDQQASSPLQDTTSIPVEMAQAKKTSGKRSSRKSGS 259
++ + SP+ S+S SS ++S + +S SS S
Sbjct: 256 SISSSSPSSSSSSSSSSSSSSSSSSSSSCSSSSSSSSS-------SSSSSSCSSSSSSSC 98
Query: 260 SSSHHSKSSTSSSPLKASGPKRVGMSKMAV 289
SSS S S +SSS L +S +R + V
Sbjct: 97 SSSSSSTSPSSSSSLCSSTFRRFQLDSAIV 8
>TC93151 homologue to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
thaliana}, partial (4%)
Length = 657
Score = 34.7 bits (78), Expect = 0.12
Identities = 38/125 (30%), Positives = 50/125 (39%), Gaps = 3/125 (2%)
Frame = +3
Query: 202 GNPSPAKSASQREEMQQGGDQGVDQQASSPLQ-DTTSIPVEMAQAKKTSGKRSSRKSGSS 260
G P + S++Q G SSP TT+ P A A SS GSS
Sbjct: 120 GFPFGSSSSTQSSSSTSAFSFGSSPFGSSPSPFSTTTNPTSTATAP------SSFNFGSS 281
Query: 261 SSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPI--ALSSSSSDLESSSSSL 318
SS S SS+P AS P G + P S P + SS+S+ L ++S
Sbjct: 282 SSLFGASPASSTPAAASAPSIFGSATAGSPFGGGTPSTPGNLFGGASSASTPLFGGAASG 461
Query: 319 DSTES 323
+T S
Sbjct: 462 STTAS 476
>TC86826 similar to PIR|F96568|F96568 probable lipase 20450-21648
[imported] - Arabidopsis thaliana, partial (93%)
Length = 1214
Score = 34.3 bits (77), Expect = 0.16
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 28/140 (20%)
Frame = +3
Query: 206 PAKSASQREEMQQGGDQGVDQQAS-SPLQDTTSIPVEMAQAKKTSGKRSSRKSGSSSSHH 264
P S Q+ + Q+ +Q Q + +P + T+ P E A TS +++ S S SH
Sbjct: 6 PFPSLKQQRQWQRSRNQRFPQISGVTPPKKNTTPPKEFAIPNHTSKHPTAKSSHSPFSHS 185
Query: 265 S-KSSTSSSPLKASGPKRVGMSKM--------------------AVPRA------TWFSS 297
+ KS + L + P G SK AVP A TW S
Sbjct: 186 TLKSKLPFT*LTVTAPTPAGSSKKSASPTPPGVTPSSPLIS*VTAVPMASVATSGTWTKS 365
Query: 298 KPPPIALSSSSSDLESSSSS 317
PP SS+S+ L +++S
Sbjct: 366 PPPHFHFSSTSAVLLPTTTS 425
>BQ751419 weakly similar to GP|21629340|gb L509.2 {Leishmania major}, partial
(1%)
Length = 766
Score = 34.3 bits (77), Expect = 0.16
Identities = 42/191 (21%), Positives = 70/191 (35%), Gaps = 5/191 (2%)
Frame = +1
Query: 132 TLIGQAEPIPRPTPQASPRVASATVEMEDDDDDDVALADKLKIPKTRKRGATPTTSASQK 191
TL G PT QA+P +T P + A+ + S +
Sbjct: 154 TLNGNTPAPASPTAQATPPTGPSTAAPSPSTCTTTG-------PTSSSTSASSPAATSPR 312
Query: 192 RAKGAGGSTVGNPSPAKSASQREEMQQGGDQGVDQQASS-----PLQDTTSIPVEMAQAK 246
+ S+ P+PA SAS+ + + + S P + T+ P ++
Sbjct: 313 TTSPSPHSSGTPPAPAPSASRSSTSRPPRARARRAASRSSPWATPARACTTAPTSASRQT 492
Query: 247 KTSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVPRATWFSSKPPPIALSS 306
R++ K +S S+S + P K + ++ PRAT ++ P AL
Sbjct: 493 PPPSPRTAAKPKASRCTPSRSRAPTEPSKMAAAAAAAGTRATRPRAT--AAAPHRAALRL 666
Query: 307 SSSDLESSSSS 317
SS SS S+
Sbjct: 667 SSR*RPSSGSA 699
>TC77172 similar to GP|20466472|gb|AAM20553.1 putative protein {Arabidopsis
thaliana}, partial (78%)
Length = 4130
Score = 33.9 bits (76), Expect = 0.20
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
Frame = -1
Query: 175 PKTRKRGATPTTSASQKRAKGAGGSTVGNPSPAKSASQREEMQQGGDQ----GVDQQASS 230
P T+ R + S + S + P + ++ E GG G+ + SS
Sbjct: 1823 PTTKARCTLSSNEGSLLSSTSTPSSILSEPFALSATTKLPEAADGGVSALGLGILLKKSS 1644
Query: 231 PLQDTTSIPVEMAQAKKTSGKRSSRKSGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVP 290
PL + +A S S S + S S L P+ V +AVP
Sbjct: 1643 PLSKNKLLASLVATCPMLLADVPSSPRAFISWESSSLTMSFSSLGTLKPRCVRSFVLAVP 1464
Query: 291 RATWFSSKPPPIALSSSSSD 310
++ + K P ++LSSS +D
Sbjct: 1463 SSSNITFKKPHVSLSSSDTD 1404
>TC80942 GP|21112489|gb|AAM40721.1 conserved hypothetical protein
{Xanthomonas campestris pv. campestris str. ATCC 33913},
partial (9%)
Length = 482
Score = 33.5 bits (75), Expect = 0.26
Identities = 28/104 (26%), Positives = 43/104 (40%), Gaps = 18/104 (17%)
Frame = -3
Query: 350 YTKECRDNLS-NFP-PQDMQNRPSPAREEN-----IPHDEVQGGEDPIIQPDQVIGVMPP 402
+T + + N + FP P+ + + P P R N H Q P ++G+ P
Sbjct: 384 FTHQTQQNQTMKFPKPKQIMSMPQPPRLRNQSLK*FTHQTPQNLTMKFPNPKLIMGMPRP 205
Query: 403 PKA---DVLASAHSEPS--------PRQFQTSPQQPRLSPQRLQ 435
PK+ + S H P P+Q + PQ PRL Q L+
Sbjct: 204 PKSRNPSLKQSTHQTPQNQTMKFPKPKQIMSMPQPPRLRNQSLK 73
>TC87401 similar to PIR|B84587|B84587 probable glutaredoxin [imported] -
Arabidopsis thaliana, partial (63%)
Length = 914
Score = 33.5 bits (75), Expect = 0.26
Identities = 29/73 (39%), Positives = 34/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 257 SGSSSSHHSKSSTSSSPLKASGPKRVGMSKMAVP---RATWFSSKPPPIALSSSSSDLES 313
S SSSS SK T +P+ S P S P RA SS P P + SSSSS S
Sbjct: 96 SSSSSSSISKIFTFYTPISTSSPIITNASSRRAPTFPRAMSSSSSPSPSSSSSSSS---S 266
Query: 314 SSSSLDSTESDPV 326
S L+ T + V
Sbjct: 267 FGSRLEETIKNTV 305
>TC86635 weakly similar to GP|9758600|dbj|BAB09233.1
gene_id:MDF20.10~pir||T08929~similar to unknown protein
{Arabidopsis thaliana}, partial (32%)
Length = 1963
Score = 33.5 bits (75), Expect = 0.26
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +2
Query: 143 PTPQASPRVASATVEMEDDDDDDVALADKLKIPKTRKRGATPTTSASQKRAKGAGGSTVG 202
P P+ +P+ +S T DDD ++ +P + +K+++ G +
Sbjct: 1142 PPPKRAPKKSSNTRPKSDDDINE-----------------SPKVFSRKKKSEQGGKQKIS 1270
Query: 203 NPSPAKSASQREEMQQGGDQGVDQQ---ASSPLQD 234
P+P KS+S+ +E + +G ++ +SSP D
Sbjct: 1271 TPTPTKSSSKSKEKTEKVTKGKGKKKETSSSPTDD 1375
>TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-related
protein complex AP-3 beta 1 subunit {Mus musculus},
partial (2%)
Length = 931
Score = 33.1 bits (74), Expect = 0.35
Identities = 30/138 (21%), Positives = 54/138 (38%), Gaps = 18/138 (13%)
Frame = +1
Query: 153 SATVEMEDDDDDDVALADKLKIPKTRKRGATPTTSASQKRAKGAGGSTVGNPSPAKSASQ 212
S++ E E D++D + D+ + + + TP+ + + + NP PA+S S
Sbjct: 187 SSSEEEEGDEEDGSSSEDEEE--EDNQTQQTPSKDSKPASKNPPPSTPISNPKPAESESG 360
Query: 213 REEMQQGGDQG-----------------VDQQASSPLQDTTSIPVEMAQAKKTSG-KRSS 254
E + G + V AS P++ T + SG KR +
Sbjct: 361 SESGSESGTESDSEPEHKSEPTPPPNPKVKPLASKPMKTQTQAQAQSTPVPIKSGTKRVA 540
Query: 255 RKSGSSSSHHSKSSTSSS 272
S + S SK T+++
Sbjct: 541 ESSTGNDSKRSKKKTTTA 594
Score = 32.0 bits (71), Expect = 0.77
Identities = 31/136 (22%), Positives = 50/136 (35%), Gaps = 3/136 (2%)
Frame = +1
Query: 351 TKECRDNLSNFPPQDMQNRPSPAREENIPHDEVQGGEDPIIQPDQVIGVMPPPKADVLAS 410
+K+ + N PP + P PA E+ + G + +P+ PPP V
Sbjct: 277 SKDSKPASKNPPPSTPISNPKPAESESGSESGSESGTESDSEPEHKSEPTPPPNPKVKPL 456
Query: 411 AHSEPSPRQFQTSPQQ---PRLSPQRLQQDARAALLSPHAKGGSASSKTAASSHTSSERL 467
A S+P Q Q Q P S + ++ S +K + ++ + E
Sbjct: 457 A-SKPMKTQTQAQAQSTPVPIKSGTKRVAESSTGNDSKRSKKKTTTAGGGSDDENEVEED 633
Query: 468 SALLVEDPLSIFQSFF 483
+ L ED FQ F
Sbjct: 634 AKLTGEDSKKNFQRVF 681
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.129 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,760,202
Number of Sequences: 36976
Number of extensions: 318465
Number of successful extensions: 3031
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 2174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2619
length of query: 653
length of database: 9,014,727
effective HSP length: 102
effective length of query: 551
effective length of database: 5,243,175
effective search space: 2888989425
effective search space used: 2888989425
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0545.2