BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0520.2
(280 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85095 similar to GP|13992452|emb|CAC38047. carnitine acyl carr... 205 2e-53
AW267865 similar to GP|13992452|em carnitine acyl carrier-like p... 198 2e-51
TC81979 similar to GP|12643054|gb|AAK00443.1 putative carnitine/... 69 2e-12
TC81666 similar to PIR|T07793|T07793 uncoupling protein (clone S... 60 1e-09
TC83901 similar to PIR|B96830|B96830 hypothetical protein F19K16... 52 3e-07
TC85867 similar to PIR|D84613|D84613 hypothetical protein At2g22... 48 5e-06
TC86166 similar to PIR|T01729|T01729 mitochondrial solute carrie... 47 6e-06
BQ139251 similar to GP|396595|emb|C ACR1-protein {Saccharomyces ... 47 1e-05
TC80182 similar to GP|10177187|dbj|BAB10321. mitochondrial carri... 45 4e-05
TC92386 similar to GP|10177187|dbj|BAB10321. mitochondrial carri... 44 7e-05
BF636076 similar to GP|3068714|gb| unknown {Arabidopsis thaliana... 43 2e-04
TC79872 similar to GP|22002462|dbj|BAC06495. mitochondrial uncou... 42 3e-04
BF635367 similar to PIR|T01729|T01 mitochondrial solute carrier ... 42 3e-04
TC88614 similar to GP|20161078|dbj|BAB90009. putative mitochondr... 41 4e-04
TC83059 similar to PIR|F84823|F84823 probable peroxisomal membra... 41 6e-04
TC93463 similar to GP|15145367|gb|AAB54239.2 Hypothetical protei... 40 8e-04
AW689680 similar to PIR|G96770|G96 hypothetical protein F1O17.9 ... 40 0.001
TC79436 similar to GP|18252183|gb|AAL61924.1 putative mitochondr... 40 0.001
TC79679 similar to GP|18377839|gb|AAL67106.1 AT5g01500/F7A7_20 {... 39 0.002
TC81297 similar to GP|9758252|dbj|BAB08751.1 calcium-binding tra... 39 0.003
>TC85095 similar to GP|13992452|emb|CAC38047. carnitine acyl carrier-like
protein {Arabidopsis thaliana}, partial (51%)
Length = 579
Score = 205 bits (521), Expect = 2e-53
Identities = 106/131 (80%), Positives = 110/131 (83%), Gaps = 12/131 (9%)
Frame = +2
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAE 60
MGDVAKDL AGTV GAAQLIVGHPFDTIKVKLQSQPTP+PGQ PRYSGA DAV+QTLAAE
Sbjct: 92 MGDVAKDLAAGTVGGAAQLIVGHPFDTIKVKLQSQPTPLPGQPPRYSGAFDAVRQTLAAE 271
Query: 61 GPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP------------GAGAGLAVSF 108
GP GLYKG GAPLATVAAFNA LFTVRGQME+L RSHP GAGAG+AVSF
Sbjct: 272 GPGGLYKGMGAPLATVAAFNAVLFTVRGQMESLVRSHPGAPLTVNQQFVCGAGAGVAVSF 451
Query: 109 LVCPTELIKCR 119
L CPTELIKCR
Sbjct: 452 LACPTELIKCR 484
>AW267865 similar to GP|13992452|em carnitine acyl carrier-like protein
{Arabidopsis thaliana}, partial (58%)
Length = 603
Score = 198 bits (504), Expect = 2e-51
Identities = 101/131 (77%), Positives = 110/131 (83%), Gaps = 12/131 (9%)
Frame = +1
Query: 1 MGDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAE 60
+GDVA DL AGT+ GAAQLIVGHPFDTIKVKLQSQPTP+PGQ+P+YSGAIDAVK+T+AAE
Sbjct: 46 IGDVA*DLTAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQVPKYSGAIDAVKKTIAAE 225
Query: 61 GPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP------------GAGAGLAVSF 108
GP GLYKG GAPLATVAAFNA LFTVRGQMEAL +SHP GA AGL+VSF
Sbjct: 226 GPGGLYKGMGAPLATVAAFNAVLFTVRGQMEALLKSHPGDVLTINQQLVCGAAAGLSVSF 405
Query: 109 LVCPTELIKCR 119
L CPTELIKCR
Sbjct: 406 LACPTELIKCR 438
>TC81979 similar to GP|12643054|gb|AAK00443.1 putative
carnitine/acylcarnitine translocase {Oryza sativa},
partial (28%)
Length = 561
Score = 69.3 bits (168), Expect = 2e-12
Identities = 41/84 (48%), Positives = 51/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 197 SVMVAEGLTVASFRFLVYGTGVVKK*FK*MTREIQNFQVQLMLLEGF*P-EGITGLYKGF 255
S+M++ GL A+F F+VY T V+K + + F + EG GLYKGF
Sbjct: 16 SLMLSGGLAGAAFWFMVYPTDVIKSVIQVDDYKNPKFSGSIDAFRRIKATEGFKGLYKGF 195
Query: 256 GTAMFRSVPVNAACFLAYKMTRSA 279
G AM RSVP NAACFLAY+MTRSA
Sbjct: 196 GPAMCRSVPANAACFLAYEMTRSA 267
Score = 47.8 bits (112), Expect = 5e-06
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +1
Query: 8 LIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYK 67
+++G + GAA + +P D IK +Q + P++SG+IDA ++ A EG +GLYK
Sbjct: 22 MLSGGLAGAAFWFMVYPTDVIKSVIQVDDY----KNPKFSGSIDAFRRIKATEGFKGLYK 189
Query: 68 GRGAPLATVAAFNAALF 84
G G + NAA F
Sbjct: 190GFGPAMCRSVPANAACF 240
>TC81666 similar to PIR|T07793|T07793 uncoupling protein (clone StUCP7)
mitochonrial - potato, partial (85%)
Length = 911
Score = 59.7 bits (143), Expect = 1e-09
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Frame = +3
Query: 1 MGDV--AKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLA 58
+GDV +K ++A GA ++V +P D +KV+LQ++ PG RYSG+++A +
Sbjct: 441 VGDVPLSKKILAAFTTGAVAIMVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSSIVR 620
Query: 59 AEGPRGLYKGRGAPLATVAAFNAALFTVRGQMEALFRSHP------------GAGAGLAV 106
EG R L+ G G +A NAA Q++ P G GAG
Sbjct: 621 QEGVRALWTGLGPNIARNGIINAAELASYDQVKQTILKIPXFTDNVVTHLFAGLGAGFFA 800
Query: 107 SFLVCPTELIKCR 119
+ P +++K R
Sbjct: 801 VCIGSPVDVVKSR 839
Score = 34.7 bits (78), Expect = 0.042
Identities = 19/48 (39%), Positives = 24/48 (49%), Gaps = 3/48 (6%)
Frame = +3
Query: 24 PFDTIKVKLQSQPTPIPGQ---LPRYSGAIDAVKQTLAAEGPRGLYKG 68
P DT KV+LQ Q + G LP+Y G + V EG L+KG
Sbjct: 204 PLDTAKVRLQLQKQAVAGDVSSLPKYKGMLGTVGTIAREEGLSALWKG 347
>TC83901 similar to PIR|B96830|B96830 hypothetical protein F19K16.14
[imported] - Arabidopsis thaliana, partial (32%)
Length = 584
Score = 51.6 bits (122), Expect = 3e-07
Identities = 31/89 (34%), Positives = 48/89 (53%)
Frame = +1
Query: 6 KDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGL 65
++ +AG G A +I G+P DT++++ QS GQ A + ++Q L+ EG L
Sbjct: 331 REFVAGGFGGTAGVISGYPLDTLRIRQQSG-----GQ---NGSAFNILRQMLSKEGFCSL 486
Query: 66 YKGRGAPLATVAAFNAALFTVRGQMEALF 94
Y+G GAPLA+V NA +F + F
Sbjct: 487 YRGMGAPLASVTFQNAVVFQTYAVLSRAF 573
>TC85867 similar to PIR|D84613|D84613 hypothetical protein At2g22500
[imported] - Arabidopsis thaliana, partial (91%)
Length = 1510
Score = 47.8 bits (112), Expect = 5e-06
Identities = 26/86 (30%), Positives = 40/86 (46%)
Frame = +1
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGR 69
A G + +P D IK ++ + G+ P Y+GA+D +T+ AEGP LYKG
Sbjct: 994 ASFAAGFVAAVASNPVDVIKTRVMNMKVEA-GKEPPYAGALDCALKTVRAEGPMALYKGF 1170
Query: 70 GAPLATVAAFNAALFTVRGQMEALFR 95
++ F LF Q+ L +
Sbjct: 1171 IPTISRQGPFTVVLFVTLEQVRKLLK 1248
Score = 38.5 bits (88), Expect = 0.003
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 12/128 (9%)
Frame = +1
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
+ + + AG + G +G+P D V++Q+ P Q Y +DA+ + EG
Sbjct: 676 LVRKIEAGLIAGGVGAAIGNPADVAMVRMQADGRLPPAQQRNYKSVVDAITRMAKQEGVT 855
Query: 64 GLYKGRG-----APLATVAAFNA-----ALFTVRGQMEALFRSHPGA--GAGLAVSFLVC 111
L++G A L T + + + +G M +H A AG +
Sbjct: 856 SLWRGSSLTVNRAMLVTASQLASYDQFKEMILEKGVMRDGLGTHVTASFAAGFVAAVASN 1035
Query: 112 PTELIKCR 119
P ++IK R
Sbjct: 1036PVDVIKTR 1059
Score = 29.3 bits (64), Expect = 1.8
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Frame = +1
Query: 9 IAGTVEGA-AQLIVG---HPFDTIKVKLQSQ----PTPIPGQLPR 45
+ G VEG A +I G HP D IKV++Q Q P P P Q+ R
Sbjct: 295 VKGFVEGGIASIIAGCSTHPLDLIKVRMQLQGENAPKPNPVQILR 429
>TC86166 similar to PIR|T01729|T01729 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana, partial (98%)
Length = 1789
Score = 47.4 bits (111), Expect = 6e-06
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 19/137 (13%)
Frame = +3
Query: 2 GDVAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEG 61
G + K L+AG V G P + +K+ LQ Q P + +YSG I +K EG
Sbjct: 444 GSICKSLVAGGVAGGVSRTAVAPLERMKILLQVQN---PHNI-KYSGTIQGLKYIWRTEG 611
Query: 62 PRGLYKGRGAPLATVAAFNAALF-------------------TVRGQMEALFRSHPGAGA 102
RGL+KG G A + +A F Q+ + R GA A
Sbjct: 612 FRGLFKGNGTNCARIVPNSAVKFFSYEQASKGILHLYRQQTGNEDAQLTPVLRLGAGACA 791
Query: 103 GLAVSFLVCPTELIKCR 119
G+ P ++++ R
Sbjct: 792 GIIAMSATYPMDMVRGR 842
Score = 36.2 bits (82), Expect = 0.014
Identities = 20/59 (33%), Positives = 27/59 (44%)
Frame = +3
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
AG G + +P D ++ ++ Q P Q Y G A+ L EGPR LYKG
Sbjct: 777 AGACAGIIAMSATYPMDMVRGRITVQTEKSPYQ---YRGMFHALSTVLREEGPRALYKG 944
Score = 32.0 bits (71), Expect = 0.27
Identities = 23/75 (30%), Positives = 36/75 (47%), Gaps = 10/75 (13%)
Frame = +3
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQ-----SQPTPIPG----QLP-RYSGAIDAV 53
V L G G V +P D I+ ++Q + + I G ++P Y+G +DA
Sbjct: 1068 VTTRLACGAAAGTIGQTVAYPLDVIRRRMQMTGWHNAASVITGDGVGKVPLEYTGMVDAF 1247
Query: 54 KQTLAAEGPRGLYKG 68
++T+ EG LYKG
Sbjct: 1248 RKTVRHEGFGALYKG 1292
>BQ139251 similar to GP|396595|emb|C ACR1-protein {Saccharomyces cerevisiae},
partial (24%)
Length = 678
Score = 46.6 bits (109), Expect = 1e-05
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 AKDLIAGTVEGAAQLIVGHPFDTIKVKLQ-SQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
A +LIAG G + +V HP DTIKV++Q S+ +PG R G + + + E
Sbjct: 335 ATNLIAGGGAGMMEALVCHPLDTIKVRMQLSRRARMPGAPKR--GFLKTGSEIVKRETAL 508
Query: 64 GLYKGRGAPLATVAAFNAALFT 85
GLYKG GA L + A FT
Sbjct: 509 GLYKGLGAVLTGIVPKMAIRFT 574
>TC80182 similar to GP|10177187|dbj|BAB10321. mitochondrial carrier
protein-like {Arabidopsis thaliana}, partial (88%)
Length = 1293
Score = 44.7 bits (104), Expect = 4e-05
Identities = 30/86 (34%), Positives = 38/86 (43%), Gaps = 9/86 (10%)
Frame = +1
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQ--PTPIPGQLPR-------YSGAIDAVKQTLAAE 60
AG + GA V P D IK++ Q Q PT + L R Y+G A K E
Sbjct: 109 AGAISGAISRTVTSPLDVIKIRFQVQLEPTSLWTSLHRDLSKPSKYTGMFQATKDIFREE 288
Query: 61 GPRGLYKGRGAPLATVAAFNAALFTV 86
G RG ++G L V + A FTV
Sbjct: 289 GIRGFWRGNVPALLMVMPYTAIQFTV 366
>TC92386 similar to GP|10177187|dbj|BAB10321. mitochondrial carrier
protein-like {Arabidopsis thaliana}, partial (56%)
Length = 813
Score = 43.9 bits (102), Expect = 7e-05
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Frame = +2
Query: 7 DLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTP-----------IPGQLPRYSGAIDAVKQ 55
D AG + G V P D IK++ Q Q P + +Y+G + A K
Sbjct: 224 DSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLQKDLVSSAPSKYTGMLQATKD 403
Query: 56 TLAAEGPRGLYKGRGAPLATVAAFNAALFTV 86
L EG +G ++G L V + A FTV
Sbjct: 404 ILREEGLKGFWRGNVPALLMVMPYTAIQFTV 496
>BF636076 similar to GP|3068714|gb| unknown {Arabidopsis thaliana}, partial
(55%)
Length = 673
Score = 42.7 bits (99), Expect = 2e-04
Identities = 34/123 (27%), Positives = 57/123 (45%), Gaps = 12/123 (9%)
Frame = +3
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYS-GAIDAVKQTLAAEGPRGLYK 67
+AG V GAA V P D IK+ +Q+ I + + + G I+A+ EG RG +K
Sbjct: 108 LAGAVAGAAAKTVTAPLDRIKLLMQTHGVRIRQESAKKTIGFIEAISMIGKEEGIRGYWK 287
Query: 68 G------RGAPLATVAAFNAALFT-----VRGQMEALFRSHPGAGAGLAVSFLVCPTELI 116
G R P + V F ++ ++ + R GA AG+ +F+ P +++
Sbjct: 288 GNLPQVIRVIPYSAVQLFAYEIYKKIFKGKNDELSVVGRLAAGAFAGMTSTFVTYPLDVL 467
Query: 117 KCR 119
+ R
Sbjct: 468 RLR 476
>TC79872 similar to GP|22002462|dbj|BAC06495. mitochondrial uncoupling
protein {Helicodiceros muscivorus}, partial (46%)
Length = 861
Score = 41.6 bits (96), Expect = 3e-04
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Frame = +1
Query: 45 RYSGAIDAVKQTLAAEGPRGLYKGRGAPLATVAAFNAA-----------LFTVRGQMEAL 93
RYSGA+DA L EG L+ G G +A A NAA + + G M+
Sbjct: 1 RYSGAMDAYSTILRQEGLGALWTGLGPNIARNAIINAAELASYDRVKQTILKIPGFMDNA 180
Query: 94 FRSH--PGAGAGLAVSFLVCPTELIKCR 119
F +H G GAGL F+ P +++K R
Sbjct: 181 F-THLLAGLGAGLFAVFIGSPVDVVKSR 261
>BF635367 similar to PIR|T01729|T01 mitochondrial solute carrier protein
homolog - Arabidopsis thaliana, partial (30%)
Length = 584
Score = 41.6 bits (96), Expect = 3e-04
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
+ K L+AG V G P + +K+ LQ Q +Y+G + +K EG R
Sbjct: 211 ICKSLVAGGVAGGVSRTAVAPLERLKILLQVQNR----HNVKYNGTVQGLKYIWKTEGFR 378
Query: 64 GLYKGRGAPLATVAAFNAALF 84
G++KG G A + +A F
Sbjct: 379 GMFKGNGTNCARIIPNSAVKF 441
>TC88614 similar to GP|20161078|dbj|BAB90009. putative mitochondrial carrier
{Oryza sativa (japonica cultivar-group)}, partial (74%)
Length = 1412
Score = 41.2 bits (95), Expect = 4e-04
Identities = 34/134 (25%), Positives = 50/134 (36%), Gaps = 23/134 (17%)
Frame = +1
Query: 7 DLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQL-------------PRYSGAIDAV 53
DL+AG+ G ++ +P D + KL Q G + P ++G +
Sbjct: 661 DLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTKGCIKDGIKAVHSQPVGPVHNGIKGVL 840
Query: 54 KQTLAAEGPRGLYKGRGAPLATVAAFNAALFTV----------RGQMEALFRSHPGAGAG 103
K G RGLY+G G L + + F Q L R GA AG
Sbjct: 841 KSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAG 1020
Query: 104 LAVSFLVCPTELIK 117
L L P +++K
Sbjct: 1021LFGQTLTYPLDVVK 1062
>TC83059 similar to PIR|F84823|F84823 probable peroxisomal membrane carrier
protein [imported] - Arabidopsis thaliana, partial (27%)
Length = 765
Score = 40.8 bits (94), Expect = 6e-04
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +3
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
+ G V +V +P +K +LQ++ + Y G DA+ + + EG G YKG
Sbjct: 147 LLGAVAKLGATVVTYPLLVVKARLQARQVNNGDKRHNYKGTQDAIIKMIRYEGFNGFYKG 326
Query: 69 RGAPLATVAAFNAALFTVRGQMEALFRS 96
G + A LF V+ ++ RS
Sbjct: 327 MGTKIVQSVLAAAVLFMVKEKLVEQTRS 410
>TC93463 similar to GP|15145367|gb|AAB54239.2 Hypothetical protein K07B1.3
{Caenorhabditis elegans}, partial (5%)
Length = 754
Score = 40.4 bits (93), Expect = 8e-04
Identities = 26/79 (32%), Positives = 39/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPR---YSGAIDAVKQTLAAEGPRGL 65
+AG++ L + +P D K +LQ Q ++ + Y DA + +A+EG GL
Sbjct: 210 VAGSLGALIALFITYPLDITKTRLQVQSKSDSSKIAKNEYYHSTKDAFYKIIASEGIFGL 389
Query: 66 YKGRGAPLATVAAFNAALF 84
Y G A L VA+ N A F
Sbjct: 390 YAGLPAGLIGVASTNFAYF 446
>AW689680 similar to PIR|G96770|G96 hypothetical protein F1O17.9 [imported] -
Arabidopsis thaliana, partial (43%)
Length = 687
Score = 40.0 bits (92), Expect = 0.001
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +1
Query: 4 VAKDLIAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPR 63
V ++ + G V GA + HP DTIK ++QSQ I + G + V+ +G R
Sbjct: 118 VWREFVWGAVAGAFGEGMMHPVDTIKTRIQSQ--AILNGVKNQKGILQMVRSVWKIDGLR 291
Query: 64 GLYKGRGAPLATVAAFNAALF-TVRGQMEALFRSHPGAG 101
G Y+G + A A F + + + SHP G
Sbjct: 292 GFYRGVVPGVTGSLATGATYFGVIESTKKWIEDSHPSLG 408
>TC79436 similar to GP|18252183|gb|AAL61924.1 putative mitochondrial carrier
protein {Arabidopsis thaliana}, partial (77%)
Length = 1021
Score = 39.7 bits (91), Expect = 0.001
Identities = 27/93 (29%), Positives = 39/93 (41%)
Frame = +3
Query: 9 IAGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
+AG V P D + KL Q Q YSG ID ++ L ++G RGLY+G
Sbjct: 528 VAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAQ---YSGGIDVARKILRSDGIRGLYRG 698
Query: 69 RGAPLATVAAFNAALFTVRGQMEALFRSHPGAG 101
G + T + +A + G + H G
Sbjct: 699 FGLSVVTYSPSSAVWWASYGSSQRFIWRHLDQG 797
Score = 32.0 bits (71), Expect = 0.27
Identities = 24/65 (36%), Positives = 35/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 203 GLTVASFRFLVYGTGVVKK*FK*MTR---EIQNFQVQLMLLEGF*PEGITGLYKGFGTAM 259
G+TVA +Y VVK + T+ E + V LL+ +GI GLY+GFGT +
Sbjct: 249 GVTVA-----LYPVSVVKTRLQVATKGAAERNAYSVAKGLLK---TDGIPGLYRGFGTVI 404
Query: 260 FRSVP 264
F ++P
Sbjct: 405 FGAIP 419
Score = 30.0 bits (66), Expect = 1.0
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 11 GTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKGRG 70
G + GA + P DTIK +LQ + G R S K + +G +GLY+G G
Sbjct: 858 GIIAGATASCITTPLDTIKTRLQ-----VMGNDNR-SSIKQVAKDLIKEDGWKGLYRGFG 1019
Score = 27.3 bits (59), Expect = 6.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 246 EGITGLYKGFGTAMFRSVPVNAACFLAY 273
+GI GLY+GFG ++ P +A + +Y
Sbjct: 672 DGIRGLYRGFGLSVVTYSPSSAVWWASY 755
>TC79679 similar to GP|18377839|gb|AAL67106.1 AT5g01500/F7A7_20 {Arabidopsis
thaliana}, partial (61%)
Length = 1003
Score = 38.9 bits (89), Expect = 0.002
Identities = 31/122 (25%), Positives = 55/122 (44%), Gaps = 12/122 (9%)
Frame = +3
Query: 10 AGTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYS-GAIDAVKQTLAAEGPRGLYKG 68
AG GAA P D IK+ +Q+ + + + + ++A+ EG RG +KG
Sbjct: 321 AGAFAGAAAKTFTAPLDRIKLLMQTHGVRVGQESAKKAISFVEAITVIGKEEGIRGYWKG 500
Query: 69 RGAPLATVAAFNAA----------LFT-VRGQMEALFRSHPGAGAGLAVSFLVCPTELIK 117
+ V ++A LFT G++ + R GA AG+ +F+ P ++++
Sbjct: 501 NLPQVIRVIPYSAVQLFAYELYKKLFTGQNGELSVVARLSAGAFAGMTSTFITYPLDVLR 680
Query: 118 CR 119
R
Sbjct: 681 LR 686
>TC81297 similar to GP|9758252|dbj|BAB08751.1 calcium-binding
transporter-like protein {Arabidopsis thaliana}, partial
(26%)
Length = 636
Score = 38.5 bits (88), Expect = 0.003
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +1
Query: 11 GTVEGAAQLIVGHPFDTIKVKLQSQPTPIPGQLPRYSGAIDAVKQTLAAEGPRGLYKG 68
GT+ G +P I+ +LQ+QP Y G DA +T EG RG YKG
Sbjct: 193 GTISGTLGATCVYPLQVIRTRLQAQPL---NSSDAYKGMFDAFCRTFQHEGFRGFYKG 357
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.341 0.150 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,946,318
Number of Sequences: 36976
Number of extensions: 87673
Number of successful extensions: 675
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of query: 280
length of database: 9,014,727
effective HSP length: 95
effective length of query: 185
effective length of database: 5,502,007
effective search space: 1017871295
effective search space used: 1017871295
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 58 (26.9 bits)
Lotus: description of TM0520.2