BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0437a.8
(446 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85408 homologue to PIR|S20869|S20869 tubulin beta-2 chain - ga... 866 0.0
TC85410 homologue to PIR|JC2510|JC2510 beta-tubulin R1623 - rice... 865 0.0
TC85406 SP|P29500|TBB1_PEA Tubulin beta-1 chain. [Garden pea] {P... 862 0.0
TC85405 SP|Q39445|TBB_CICAR Tubulin beta chain. [Chickpea Garba... 858 0.0
TC86477 homologue to GP|15408819|dbj|BAB64211. tubulin beta-4 ch... 833 0.0
TC77912 homologue to GP|10176853|dbj|BAB10059. beta tubulin {Ara... 436 0.0
TC85409 homologue to PIR|S20869|S20869 tubulin beta-2 chain - ga... 457 e-129
TC85407 SP|P28551|TBB3_SOYBN Tubulin beta chain (Fragment). [Soy... 321 e-125
TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-... 389 e-109
TC76675 SP|P46259|TBA1_PEA Tubulin alpha-1 chain. [Garden pea] {... 385 e-107
CA921757 homologue to SP|Q41784|TBB7 Tubulin beta-7 chain (Beta-... 298 4e-81
TC76677 homologue to SP|P33629|TBA_PRUDU Tubulin alpha chain. [A... 288 1e-80
AW689076 homologue to PIR|JA0048|JA0 tubulin beta-1 chain - soyb... 275 5e-74
TC76674 homologue to GP|23452339|gb|AAN33000.1 alpha-tubulin 4 {... 270 6e-73
TC90170 homologue to GP|12963226|gb|AAK11179.1 alpha-tubulin {Co... 238 3e-63
AL369498 homologue to GP|4079637|emb beta-tubulin {Tetrahymena p... 223 1e-58
BG644366 GP|17402471|em alpha-tubulin {Nicotiana tabacum}, parti... 214 4e-56
AL369497 homologue to SP|O04386|TBB_ Tubulin beta chain. {Chlamy... 209 2e-54
TC92572 similar to SP|Q9ZRB0|TBB3_WHEAT Tubulin beta-3 chain (Be... 199 2e-51
TC91984 homologue to GP|16611919|gb|AAL27406.1 alpha-tubulin {Ar... 187 9e-48
>TC85408 homologue to PIR|S20869|S20869 tubulin beta-2 chain - garden pea
(fragment), complete
Length = 2121
Score = 866 bits (2238), Expect = 0.0
Identities = 415/441 (94%), Positives = 435/441 (98%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEV+C EHGID +G+Y GD++LQLERINVYYNEA+GGR+V
Sbjct: 431 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 610
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 611 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 790
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 791 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 970
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 971 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 1150
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNL+PFPRLHFFM+GFAPLTSRGSQQYRAL+VPE+TQQMWDSKNMM
Sbjct: 1151RFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMM 1330
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDIPP G
Sbjct: 1331CAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 1510
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
LKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 1511LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1690
Query: 421 EYQQYQDATADEDEYEEEEEE 441
EYQQYQDATA+EDEYE+EEE+
Sbjct: 1691EYQQYQDATAEEDEYEDEEED 1753
>TC85410 homologue to PIR|JC2510|JC2510 beta-tubulin R1623 - rice, complete
Length = 2139
Score = 865 bits (2234), Expect = 0.0
Identities = 416/443 (93%), Positives = 436/443 (97%), Gaps = 1/443 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILH+QGGQCGNQIG+KFWEV+CDEHGID +G+Y G+++LQLER+NVYYNEA+ GR+V
Sbjct: 95 MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRFV 274
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 275 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 454
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 455 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 634
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 635 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 814
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM
Sbjct: 815 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 994
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 995 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 1174
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
L M+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 1175LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1354
Query: 421 EYQQYQDATADED-EYEEEEEEE 442
EYQQYQDATADE+ EY++EEEEE
Sbjct: 1355EYQQYQDATADEEGEYDDEEEEE 1423
>TC85406 SP|P29500|TBB1_PEA Tubulin beta-1 chain. [Garden pea] {Pisum
sativum}, partial (98%)
Length = 1745
Score = 862 bits (2226), Expect = 0.0
Identities = 414/442 (93%), Positives = 432/442 (97%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MR+ILHIQGGQCGNQIGAKFWEV+C EHGID +G+Y GD++LQLERI+VYYNEA+GGR+V
Sbjct: 116 MRQILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERIDVYYNEASGGRFV 295
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 296 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 475
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 476 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 655
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADE MVLDNEALYDICFR LKL+ P+FGDLNHLISATMSGVTCCL
Sbjct: 656 EPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGDLNHLISATMSGVTCCL 835
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYR L+VPELTQQMWD+KNMM
Sbjct: 836 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELTQQMWDAKNMM 1015
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPP G
Sbjct: 1016CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 1195
Query: 361 LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
LKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
Sbjct: 1196LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 1375
Query: 421 EYQQYQDATADEDEYEEEEEEE 442
EYQQYQDATADEDEY EEE EE
Sbjct: 1376EYQQYQDATADEDEYGEEEGEE 1441
>TC85405 SP|Q39445|TBB_CICAR Tubulin beta chain. [Chickpea Garbanzo] {Cicer
arietinum}, partial (98%)
Length = 1840
Score = 858 bits (2218), Expect = 0.0
Identities = 418/445 (93%), Positives = 433/445 (96%), Gaps = 3/445 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKY--NGDAELQLERINVYYNEATGGR 58
MREILH+QGGQCGNQIG+KFWEVICDEHGID +GKY G + QLERINVYYNEA+GGR
Sbjct: 230 MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGR 409
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
YVPRAVLMDLEPGTM+S+RSGPFG+IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 410 YVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 589
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 590 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 769
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLISATMSGVTC
Sbjct: 770 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 949
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY +LTVPELTQQMWD+KN
Sbjct: 950 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 1129
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MMCAADPRHGRYLTASAMFRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKSSVCDIPP
Sbjct: 1130MMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPP 1309
Query: 359 KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
K LKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 1310KNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 1489
Query: 419 VAEYQQYQDATA-DEDEYEEEEEEE 442
VAEYQQYQDA A +ED+YEEEE EE
Sbjct: 1490VAEYQQYQDAIAEEEDDYEEEEGEE 1564
>TC86477 homologue to GP|15408819|dbj|BAB64211. tubulin beta-4 chain {Oryza
sativa (japonica cultivar-group)}, partial (98%)
Length = 1816
Score = 833 bits (2152), Expect = 0.0
Identities = 401/445 (90%), Positives = 426/445 (95%), Gaps = 3/445 (0%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQ-LERINVYYNEATGGRY 59
MREILHIQGGQCGNQIG KFWE +CDEHGID G+Y G+++LQ LER+NVYYNE + GRY
Sbjct: 79 MREILHIQGGQCGNQIGTKFWEAVCDEHGIDPIGQYIGNSKLQQLERVNVYYNEGSNGRY 258
Query: 60 VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
VPRAVLMDLEPGTMD+VRSGP+GQIFRPDNFVFGQSGAGNN+AKGHYTEGAELID VLDV
Sbjct: 259 VPRAVLMDLEPGTMDAVRSGPYGQIFRPDNFVFGQSGAGNNFAKGHYTEGAELIDFVLDV 438
Query: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
VRKE ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 439 VRKEVENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 618
Query: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCC 239
VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCC
Sbjct: 619 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 798
Query: 240 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNM 299
LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS+GSQ YRALTVPELTQQMWD+KNM
Sbjct: 799 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSQGSQNYRALTVPELTQQMWDAKNM 978
Query: 300 MCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPK 359
MCAADPRHGRYLTASA+FRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSVCD+PP+
Sbjct: 979 MCAADPRHGRYLTASAVFRGKMSTKEVDEQVMNVQNKNSSYFVEWIPNNVKSSVCDVPPR 1158
Query: 360 GLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
GL M+STF+GNSTSIQEMFRRVSEQF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 1159GLSMASTFVGNSTSIQEMFRRVSEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 1338
Query: 420 AEYQQYQDATA--DEDEYEEEEEEE 442
AEYQQYQDA D D+Y+EEE+ +
Sbjct: 1339AEYQQYQDAPVYEDGDDYQEEEDAQ 1413
>TC77912 homologue to GP|10176853|dbj|BAB10059. beta tubulin {Arabidopsis
thaliana}, complete
Length = 1732
Score = 436 bits (1120), Expect(2) = 0.0
Identities = 206/223 (92%), Positives = 216/223 (96%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEV+C EHGID +G+Y G+ +LQLER+NVYYNEA+ GR+V
Sbjct: 131 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGNNDLQLERVNVYYNEASCGRFV 310
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 311 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 490
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 491 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 670
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFG 223
EPYNATLSVHQLVENADECM LDNEALYDICFRTLKL TP+FG
Sbjct: 671 EPYNATLSVHQLVENADECMALDNEALYDICFRTLKLTTPSFG 799
Score = 331 bits (849), Expect(2) = 0.0
Identities = 162/185 (87%), Positives = 169/185 (90%)
Frame = +3
Query: 260 FPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG 319
FP L F G P SQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG
Sbjct: 909 FPSLAFLHGGICPTHFSWSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG 1088
Query: 320 KMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFR 379
KMSTK+VDEQMINVQNKNSSYFVEWIPNNVKS+VCDIPP GLKM+STFIGNSTSIQEMFR
Sbjct: 1089 KMSTKKVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 1268
Query: 380 RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEDEYEEEE 439
RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATADE+ Y+ E+
Sbjct: 1269 RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGYDYED 1448
Query: 440 EEEPV 444
EEE V
Sbjct: 1449 EEEEV 1463
Score = 106 bits (265), Expect = 2e-23
Identities = 51/53 (96%), Positives = 51/53 (96%)
Frame = +1
Query: 225 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRG 277
LNHLISATMSGVTCCLRF GQLNSDLRKLAVNLIPFPR HFFMVGFAPLTSRG
Sbjct: 805 LNHLISATMSGVTCCLRFTGQLNSDLRKLAVNLIPFPRWHFFMVGFAPLTSRG 963
>TC85409 homologue to PIR|S20869|S20869 tubulin beta-2 chain - garden pea
(fragment), partial (68%)
Length = 1099
Score = 457 bits (1175), Expect = e-129
Identities = 226/270 (83%), Positives = 240/270 (88%), Gaps = 2/270 (0%)
Frame = +3
Query: 3 EILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYVPR 62
EILHIQGGQCGNQIGAKFWEV+C EHGID +G+Y+G +ELQLERINVYYNEA+ GR+VPR
Sbjct: 174 EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYSGTSELQLERINVYYNEASCGRFVPR 353
Query: 63 AVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
A+LMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK
Sbjct: 354 AILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 533
Query: 123 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP
Sbjct: 534 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 713
Query: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRF 242
YNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATM V C + F
Sbjct: 714 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATM--VWCHMLF 887
Query: 243 PGQLNSDLR--KLAVNLIPFPRLHFFMVGF 270
++ LR + P F VGF
Sbjct: 888 EVPWSAKLRSEEACCESHSIPSSSLFHVGF 977
Score = 162 bits (410), Expect = 2e-40
Identities = 75/77 (97%), Positives = 77/77 (99%)
Frame = +1
Query: 234 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 293
SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM+GFAPLTSRGSQQYRAL+VPELTQQM
Sbjct: 868 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALSVPELTQQM 1047
Query: 294 WDSKNMMCAADPRHGRY 310
WDSKNMMCAADPRHGRY
Sbjct: 1048WDSKNMMCAADPRHGRY 1098
>TC85407 SP|P28551|TBB3_SOYBN Tubulin beta chain (Fragment). [Soybean]
{Glycine max}, partial (54%)
Length = 766
Score = 321 bits (822), Expect(2) = e-125
Identities = 150/154 (97%), Positives = 154/154 (99%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILHIQGGQCGNQIGAKFWEVICDEHGIDH+GKYNGD+ELQLERINVYYNEA+GGRYV
Sbjct: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYNGDSELQLERINVYYNEASGGRYV 262
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 263 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442
Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISK 154
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLIS+
Sbjct: 443 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISE 544
Score = 145 bits (366), Expect(2) = e-125
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +3
Query: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR
Sbjct: 543 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 722
Query: 214 TLKLATPTFG 223
TLKLATPTFG
Sbjct: 723 TLKLATPTFG 752
>TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-5 chain.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (98%)
Length = 1656
Score = 389 bits (1000), Expect = e-109
Identities = 184/448 (41%), Positives = 285/448 (63%), Gaps = 10/448 (2%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MREI+ I GQ G Q+G WE+ C EHGI G D+ + + + N +++E G+
Sbjct: 72 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSSVGVAHDAFNTFFSETGSGK 251
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VRSG + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 252 HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 431
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
VRK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 432 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 611
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 612 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 791
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
LRF G +N D+ + NL+P+PR+HF + +AP+ S + L+VPE+T +++ +
Sbjct: 792 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 971
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 972 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 1151
Query: 359 K--------GLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1152SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1331
Query: 411 AESNMNDLVAEYQQYQDATADEDEYEEE 438
A ++ L +Y++ A++DE E+
Sbjct: 1332AREDLAALEKDYEEVGAEGAEDDEEGED 1415
>TC76675 SP|P46259|TBA1_PEA Tubulin alpha-1 chain. [Garden pea] {Pisum
sativum}, partial (98%)
Length = 1660
Score = 385 bits (988), Expect = e-107
Identities = 182/450 (40%), Positives = 284/450 (62%), Gaps = 10/450 (2%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MRE + I GQ G Q+G WE+ C EHGI G+ GD + + N +++E G+
Sbjct: 108 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 287
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 288 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 467
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 468 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 647
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 648 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 827
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 828 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1007
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 1008MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1187
Query: 359 --------KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
++ + I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM++ EF+E
Sbjct: 1188TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEKGEFSE 1367
Query: 411 AESNMNDLVAEYQQYQDATADEDEYEEEEE 440
A ++ L +Y++ + D D+ + +E+
Sbjct: 1368AREDLAALEKDYEEVGAESGDGDDVDGDED 1457
>CA921757 homologue to SP|Q41784|TBB7 Tubulin beta-7 chain (Beta-7 tubulin).
[Maize] {Zea mays}, partial (34%)
Length = 743
Score = 298 bits (762), Expect = 4e-81
Identities = 144/148 (97%), Positives = 147/148 (99%)
Frame = -1
Query: 295 DSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354
DSKNMMCAADPRHG YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC
Sbjct: 713 DSKNMMCAADPRHGPYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 534
Query: 355 DIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
DIPPKGLKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN
Sbjct: 533 DIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 354
Query: 415 MNDLVAEYQQYQDATADEDEYEEEEEEE 442
MNDLVAEYQQYQDATADE++YEEEEEEE
Sbjct: 353 MNDLVAEYQQYQDATADEEDYEEEEEEE 270
>TC76677 homologue to SP|P33629|TBA_PRUDU Tubulin alpha chain. [Almond
Prunus amygdalus] {Prunus dulcis}, partial (80%)
Length = 1392
Score = 288 bits (738), Expect(2) = 1e-80
Identities = 138/342 (40%), Positives = 216/342 (62%), Gaps = 8/342 (2%)
Frame = +1
Query: 109 GAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
G E++D LD +RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+
Sbjct: 160 GKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT 339
Query: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHL 228
V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L
Sbjct: 340 VYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL 519
Query: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPE 288
+S +S +T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E
Sbjct: 520 VSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAE 699
Query: 289 LTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 348
+T ++ +MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P
Sbjct: 700 ITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTG 879
Query: 349 VKSSVCDIPP--------KGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
K + PP ++ + I NSTS+ E+F R+ +F M+ ++AF+HWY G
Sbjct: 880 FKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVG 1059
Query: 401 EGMDEMEFTEAESNMNDLVAEYQQYQDATADEDEYEEEEEEE 442
EGM+E EF+EA DL A + Y++ A+ E +E+ ++
Sbjct: 1060EGMEEGEFSEAR---EDLAALEKDYEEVGAESGEGGDEDMDD 1176
Score = 29.6 bits (65), Expect(2) = 1e-80
Identities = 10/21 (47%), Positives = 15/21 (70%)
Frame = +2
Query: 87 PDNFVFGQSGAGNNWAKGHYT 107
P+ + G+ A NN+A+GHYT
Sbjct: 5 PEQLISGKEDAANNFARGHYT 67
>AW689076 homologue to PIR|JA0048|JA0 tubulin beta-1 chain - soybean, partial
(33%)
Length = 468
Score = 275 bits (703), Expect(2) = 5e-74
Identities = 125/142 (88%), Positives = 134/142 (94%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREILH+Q GQCGNQIG KFWEV+CDEHGID SG Y G + LQLER+NVYYNEA+GGRYV
Sbjct: 18 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDPSGSYVGKSHLQLERVNVYYNEASGGRYV 197
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDS+RSGPFG+IFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 198 PRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 377
Query: 121 RKEAENCDCLQGFQVCHSLGGG 142
RKEA NCDCLQGFQ+CHSLGGG
Sbjct: 378 RKEAXNCDCLQGFQICHSLGGG 443
Score = 21.2 bits (43), Expect(2) = 5e-74
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 142 GTGSGMGT 149
GTGSGMGT
Sbjct: 442 GTGSGMGT 465
>TC76674 homologue to GP|23452339|gb|AAN33000.1 alpha-tubulin 4 {Gossypium
hirsutum}, partial (90%)
Length = 970
Score = 270 bits (691), Expect = 6e-73
Identities = 126/274 (45%), Positives = 186/274 (66%), Gaps = 2/274 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQL--ERINVYYNEATGGR 58
MRE + + GQ G Q+G WE+ C EHGI G+ D + + N +++E G+
Sbjct: 131 MRECISVHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTIGGGDDAFNTFFSETGAGK 310
Query: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 311 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 490
Query: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 491 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 670
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 671 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 850
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAP 272
LRF G LN D+ + NL+P+PR+HF + +AP
Sbjct: 851 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 952
>TC90170 homologue to GP|12963226|gb|AAK11179.1 alpha-tubulin
{Colletotrichum lagenarium}, partial (56%)
Length = 809
Score = 238 bits (608), Expect = 3e-63
Identities = 118/253 (46%), Positives = 164/253 (64%), Gaps = 3/253 (1%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLER---INVYYNEATGG 57
MRE++ I GQ G QI WE+ C EHGI G Y + Q + + +++E G
Sbjct: 51 MREVISINVGQAGCQIANSCWELYCLEHGIQPDG-YLTEERKQADPDHGFSTFFSETGQG 227
Query: 58 RYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
+YVPRA+ DLEP +D VR+GP+ +F P++ + G+ A NN+A+GHYT G ELID VL
Sbjct: 228 KYVPRAIYCDLEPNVVDEVRTGPYRGLFHPEHMITGKEDASNNYARGHYTVGKELIDQVL 407
Query: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
D VR+ A+NC LQGF V HS GGGTGSG G LL+ ++ +Y + L F V+P+P+ +
Sbjct: 408 DKVRRVADNCVGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTAT 587
Query: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
+VVEPYN+ L+ H +E++D ++DNEA+YDIC R L L P + +LN LI+ +S +T
Sbjct: 588 SVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSIT 767
Query: 238 CCLRFPGQLNSDL 250
LRF G LN DL
Sbjct: 768 ASLRFDGSLNVDL 806
>AL369498 homologue to GP|4079637|emb beta-tubulin {Tetrahymena pyriformis},
partial (27%)
Length = 517
Score = 223 bits (568), Expect = 1e-58
Identities = 107/124 (86%), Positives = 118/124 (94%), Gaps = 1/124 (0%)
Frame = +3
Query: 323 TKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVS 382
TKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKM+ TFIGNST+IQE+F+RVS
Sbjct: 3 TKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAVTFIGNSTAIQELFKRVS 182
Query: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADED-EYEEEEEE 441
EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL++EYQQYQDATA+ED E++EE E
Sbjct: 183 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQDATAEEDGEFDEEGGE 362
Query: 442 EPVD 445
+D
Sbjct: 363 GEMD 374
>BG644366 GP|17402471|em alpha-tubulin {Nicotiana tabacum}, partial (47%)
Length = 646
Score = 214 bits (546), Expect = 4e-56
Identities = 99/207 (47%), Positives = 147/207 (70%)
Frame = +1
Query: 44 LERINVYYNEATGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAK 103
L N +++E G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+
Sbjct: 25 LTAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 204
Query: 104 GHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM 163
GHYT G E++D LD +RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y +
Sbjct: 205 GHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 384
Query: 164 MLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFG 223
L F+++PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+
Sbjct: 385 KLGFTIYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYT 564
Query: 224 DLNHLISATMSGVTCCLRFPGQLNSDL 250
+LN LIS +S +T LRF G + D+
Sbjct: 565 NLNRLISQVISSLTASLRFDGAPDVDV 645
>AL369497 homologue to SP|O04386|TBB_ Tubulin beta chain. {Chlamydomonas
incerta}, partial (24%)
Length = 414
Score = 209 bits (532), Expect = 2e-54
Identities = 93/107 (86%), Positives = 104/107 (96%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYNGDAELQLERINVYYNEATGGRYV 60
MREI+HIQGGQCGNQIGAKFWEVI DEHG+D +G Y+GD++LQLERINVY+NEATGGRYV
Sbjct: 94 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYV 273
Query: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYT 107
PRAVLMDLEPGTMDSVR+GP+GQ+FRPDNFVFGQ+GAGNNWAKGHYT
Sbjct: 274 PRAVLMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYT 414
>TC92572 similar to SP|Q9ZRB0|TBB3_WHEAT Tubulin beta-3 chain (Beta-3
tubulin). [Wheat] {Triticum aestivum}, partial (25%)
Length = 720
Score = 199 bits (506), Expect = 2e-51
Identities = 96/112 (85%), Positives = 103/112 (91%), Gaps = 1/112 (0%)
Frame = +1
Query: 332 NVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRR 391
NVQNKNSSYFVEWIPNNVKSSVCDIPP GL MSSTF+GNSTSIQEMFRRVSEQFT MF+R
Sbjct: 1 NVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKR 180
Query: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT-ADEDEYEEEEEEE 442
KAFLHWYT EGMDEMEFTEAESNMNDLV+EYQQYQDA +E E +E++EEE
Sbjct: 181 KAFLHWYTAEGMDEMEFTEAESNMNDLVSEYQQYQDAAGVEEGESDEDDEEE 336
>TC91984 homologue to GP|16611919|gb|AAL27406.1 alpha-tubulin {Artemia
franciscana}, partial (55%)
Length = 755
Score = 187 bits (474), Expect = 9e-48
Identities = 87/243 (35%), Positives = 143/243 (58%), Gaps = 8/243 (3%)
Frame = +1
Query: 190 HQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
H +E++D ++DNE +YDIC R L + PT+ +LN LI+ +S +T LRF G LN D
Sbjct: 4 HTTLEHSDCAFMVDNEGVYDICRRNLDIERPTYTNLNRLIAQVVSSITASLRFDGSLNVD 183
Query: 250 LRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGR 309
L + NL+P+PR+HF +V +AP+ S + LTV E+T ++ N M DPRHG+
Sbjct: 184 LTEFRTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVAEITYSCFEPNNQMVKCDPRHGK 363
Query: 310 YLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP--------KGL 361
Y+ ++RG + K+V+ + ++ K + FV+W P K + PP +
Sbjct: 364 YMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 543
Query: 362 KMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAE 421
+ + + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +
Sbjct: 544 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 723
Query: 422 YQQ 424
Y++
Sbjct: 724 YEE 732
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,855,392
Number of Sequences: 36976
Number of extensions: 167840
Number of successful extensions: 1313
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of query: 446
length of database: 9,014,727
effective HSP length: 99
effective length of query: 347
effective length of database: 5,354,103
effective search space: 1857873741
effective search space used: 1857873741
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0437a.8