Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0388b.3
         (149 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CA920659 similar to GP|21740675|em OSJNBa0084K20.18 {Oryza sativ...    89  7e-19
TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein ...    70  4e-13
TC91434 weakly similar to PIR|T06144|T06144 disease resistance p...    69  5e-13
TC93047                                                                46  1e-11
TC79479 similar to GP|12056928|gb|AAG48132.1 putative resistance...    62  9e-11
BG452199 weakly similar to GP|10178211|db TMV resistance protein...    60  3e-10
AW773819 similar to GP|9858483|gb|A resistance protein MG55 {Gly...    60  4e-10
CB893943 weakly similar to PIR|T52347|T52 disease resistance pro...    59  6e-10
TC80083 weakly similar to GP|18033111|gb|AAL56987.1 functional c...    58  2e-09
TC93159 weakly similar to GP|10177477|dbj|BAB10868. disease resi...    57  2e-09
AW267887 weakly similar to GP|22037367|gb| disease resistance-li...    56  5e-09
BI265594 weakly similar to GP|9965103|gb| resistance protein LM6...    56  6e-09
TC84469 similar to GP|9858483|gb|AAG01054.1| resistance protein ...    55  1e-08
TC92944 similar to GP|9858483|gb|AAG01054.1| resistance protein ...    54  3e-08
BG649113 similar to GP|18033111|gb functional candidate resistan...    53  4e-08
TC83637 similar to GP|9279731|dbj|BAB01321.1 disease resistance ...    53  5e-08
TC92005 weakly similar to GP|18033111|gb|AAL56987.1 functional c...    52  9e-08
BF646616 similar to GP|9965103|gb|A resistance protein LM6 {Glyc...    52  1e-07
TC79857                                                                51  2e-07
BF646053 weakly similar to GP|18033111|g functional candidate re...    51  2e-07

>CA920659 similar to GP|21740675|em OSJNBa0084K20.18 {Oryza sativa}, partial
           (2%)
          Length = 790

 Score = 89.0 bits (219), Expect = 7e-19
 Identities = 60/148 (40%), Positives = 76/148 (50%), Gaps = 26/148 (17%)
 Frame = +3

Query: 28  LERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLVSLYLGTVCELNS-----LRIL-- 80
           LERL+  G  + + + PS+  L+ LA+L+L  CS L SL    +C  +S      ++L  
Sbjct: 339 LERLNLEG-NSFVSLPPSMERLSSLAYLNLAHCSWLQSLPKLQLCATSSYGGRYFKMLSG 515

Query: 81  ---HLSG-----CTRLESTPN-----------FIGNPSHFRCGFDIVVPGNKIPYWFDSQ 121
              H SG     C  LE                + NP HFRCGFDIVVPG KIP WF+ Q
Sbjct: 516 SHNHRSGLYIFNCPLLEIAEGGQSLALSWLERLVENPHHFRCGFDIVVPGEKIPEWFNHQ 695

Query: 122 FKGGSRIREVDHVYEQDHWLGFAFCAVF 149
           F G   I+  D   E D+WLGFAFC  F
Sbjct: 696 FTGKFIIKISDFYNEFDNWLGFAFCVAF 779



 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 30/67 (44%), Positives = 42/67 (61%)
 Frame = +3

Query: 33 FTGCTNLLQVHPSIGLLTELAFLSLEGCSSLVSLYLGTVCELNSLRILHLSGCTRLESTP 92
          F+ C++L  +  SI +LT+L FLSL  C++LVS+     C + SL  L L GC RLE+ P
Sbjct: 6  FSPCSSLSTIGQSIAVLTQLKFLSLRDCTNLVSIPKSINC-MTSLVTLDLCGCLRLENLP 182

Query: 93 NFIGNPS 99
            +GN S
Sbjct: 183--LGNVS 197



 Score = 37.0 bits (84), Expect = 0.003
 Identities = 31/94 (32%), Positives = 40/94 (41%), Gaps = 20/94 (21%)
 Frame = +3

Query: 27  RLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLVSLYLGTVC-------------- 72
           +L+ L    CTNL+ +  SI  +T L  L L GC  L +L LG V               
Sbjct: 60  QLKFLSLRDCTNLVSIPKSINCMTSLVTLDLCGCLRLENLPLGNVSVSAENMDYFSVSGE 239

Query: 73  ------ELNSLRILHLSGCTRLESTPNFIGNPSH 100
                  L SL  L LS C  L + P+ IG+  H
Sbjct: 240 IVDHSYYLESLIFLDLSFC-NLSTVPDAIGDLWH 338


>TC82880 similar to GP|9858483|gb|AAG01054.1| resistance protein MG55
           {Glycine max}, partial (46%)
          Length = 1238

 Score = 69.7 bits (169), Expect = 4e-13
 Identities = 37/85 (43%), Positives = 57/85 (66%)
 Frame = +2

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           LK L+LS+SKYL  TP+F     LE+L    C +LL+VHPSIG L  L  ++L+ C+SL 
Sbjct: 308 LKILNLSHSKYLKRTPDFSKLPNLEKLIMKDCQSLLEVHPSIGDLNNLLLINLKDCTSLS 487

Query: 65  SLYLGTVCELNSLRILHLSGCTRLE 89
           +L    + +L +++ L LSGC++++
Sbjct: 488 NL-PREIYQLRTVKTLILSGCSKID 559


>TC91434 weakly similar to PIR|T06144|T06144 disease resistance protein
           homolog F24J7.70 - Arabidopsis thaliana, partial (4%)
          Length = 940

 Score = 69.3 bits (168), Expect = 5e-13
 Identities = 38/87 (43%), Positives = 59/87 (67%)
 Frame = +1

Query: 2   VPFLKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCS 61
           +P L+RLDLS+SK L +  +F     LE L+   C  L+++ PSIGLL +L +L+LE C 
Sbjct: 286 LPNLRRLDLSDSKKLEKIEDFGQFPNLEWLNLERCIKLVELDPSIGLLRKLVYLNLERCY 465

Query: 62  SLVSLYLGTVCELNSLRILHLSGCTRL 88
           +LVS+    +  L+SL+ L++SGC++L
Sbjct: 466 NLVSI-PNNIFGLSSLKYLNMSGCSKL 543


>TC93047 
          Length = 812

 Score = 45.8 bits (107), Expect(2) = 1e-11
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 113 KIPYWFDSQFKGGSRIREVDHVYEQDHWLGFAFCAVF 149
           + P WFD QF G SR++  D+  + D+WLGFAFC  F
Sbjct: 111 QFPLWFDHQFAGNSRVKITDY-NKFDNWLGFAFCVAF 218



 Score = 38.9 bits (89), Expect(2) = 1e-11
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +2

Query: 93  NFIGNPSHFRCGFDIVVPGNKIP 115
           N + NP HFRCG DIVVP + IP
Sbjct: 50  NLVKNPCHFRCGLDIVVPSDTIP 118


>TC79479 similar to GP|12056928|gb|AAG48132.1 putative resistance protein
           {Glycine max}, partial (21%)
          Length = 1087

 Score = 62.0 bits (149), Expect = 9e-11
 Identities = 33/90 (36%), Positives = 49/90 (53%)
 Frame = +1

Query: 8   LDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLVSLY 67
           L+    K +   P+  G+  LERL    C NL+++H S+G L +L  L+L  C+ L +L 
Sbjct: 319 LNFDECKIITHIPDVSGAPNLERLSLDSCENLVEIHDSVGFLDKLEILNLGSCAKLRNL- 495

Query: 68  LGTVCELNSLRILHLSGCTRLESTPNFIGN 97
                 L SL+ L+LS C+ L S P  +GN
Sbjct: 496 --PPIHLTSLQHLNLSHCSSLVSFPEILGN 579



 Score = 28.1 bits (61), Expect = 1.4
 Identities = 25/86 (29%), Positives = 39/86 (45%)
 Frame = +1

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           L+ L+LS+   L+  P   G+ +         T + +   SIG L  L  L L GC +L 
Sbjct: 517 LQHLNLSHCSSLVSFPEILGNMKNITSLSLEYTAIREFPYSIGNLPRLKSLELHGCGNL- 693

Query: 65  SLYLGTVCELNSLRILHLSGCTRLES 90
            L   ++  L+ L  L +  C  L+S
Sbjct: 694 -LLPSSIILLSELEELSIWQCEGLKS 768


>BG452199 weakly similar to GP|10178211|db TMV resistance protein N
           {Arabidopsis thaliana}, partial (4%)
          Length = 666

 Score = 60.5 bits (145), Expect = 3e-10
 Identities = 36/85 (42%), Positives = 51/85 (59%)
 Frame = +3

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           LK L+LS+S +L +TP+F     LE+L  T C  L +V  SIG L ++  ++LE C SL 
Sbjct: 405 LKILNLSHSHFLSKTPDFSNLPNLEQLVLTDCPKLSEVSQSIGDLNKILLINLEDCISLQ 584

Query: 65  SLYLGTVCELNSLRILHLSGCTRLE 89
           SL   ++  L SL  L LSGC  ++
Sbjct: 585 SL-PRSIYNLKSLNTLILSGCLMID 656


>AW773819 similar to GP|9858483|gb|A resistance protein MG55 {Glycine max},
           partial (20%)
          Length = 633

 Score = 59.7 bits (143), Expect = 4e-10
 Identities = 35/85 (41%), Positives = 52/85 (61%)
 Frame = +1

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           LK L+LS+S YL +TP+F     LE+L  T C  L +V  SI  L ++  ++LE C  L 
Sbjct: 361 LKILNLSHSHYLTQTPDFSNLPNLEQLVLTDCPRLSEVSHSIEHLNKILLINLEDCIGLQ 540

Query: 65  SLYLGTVCELNSLRILHLSGCTRLE 89
           SL   ++ +L SL+ L LSGC+ ++
Sbjct: 541 SL-PRSIYKLKSLKTLILSGCSMID 612


>CB893943 weakly similar to PIR|T52347|T52 disease resistance protein
           RPP1-WsB [imported] - Arabidopsis thaliana (fragment),
           partial (2%)
          Length = 545

 Score = 59.3 bits (142), Expect = 6e-10
 Identities = 35/91 (38%), Positives = 47/91 (51%)
 Frame = +3

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           +K L L N +YL   PN  G   LE+  F  C NL+ +H SIG L +L  L+   C+ L 
Sbjct: 105 MKVLTLDNCRYLTHIPNVSGLPNLEKFSFRFCDNLIAIHDSIGNLNKLEILNAWACTKLE 284

Query: 65  SLYLGTVCELNSLRILHLSGCTRLESTPNFI 95
           +        L SL+ L LS C RL+S P  +
Sbjct: 285 NF---PPLWLPSLKELDLSFCKRLKSFPELL 368


>TC80083 weakly similar to GP|18033111|gb|AAL56987.1 functional candidate
           resistance protein KR1 {Glycine max}, partial (4%)
          Length = 1269

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 35/91 (38%), Positives = 47/91 (51%)
 Frame = +3

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           +K L L   KYL   P+  G   LE+L F  C NL+ +H SIG L +L  LS  GC+ + 
Sbjct: 249 MKVLILDRCKYLTHIPDVSGLSNLEKLSFERCYNLITIHNSIGHLNKLERLSAYGCNKVE 428

Query: 65  SLYLGTVCELNSLRILHLSGCTRLESTPNFI 95
                    L SL+ L+LS C  L+S P  +
Sbjct: 429 HF---PPLGLASLKELNLSSCRSLKSFPELL 512


>TC93159 weakly similar to GP|10177477|dbj|BAB10868. disease resistance
           protein-like {Arabidopsis thaliana}, partial (4%)
          Length = 729

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 33/92 (35%), Positives = 54/92 (57%)
 Frame = +1

Query: 16  LMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLVSLYLGTVCELN 75
           L++  +F     LE+L+  GC NL+++ PSIGLL +L +L+L  C +LVS+    +  L+
Sbjct: 61  LVKILDFGEFPNLEKLNLEGCINLVELDPSIGLLRKLVYLNLYECKNLVSI-PNNIFSLS 237

Query: 76  SLRILHLSGCTRLESTPNFIGNPSHFRCGFDI 107
           SL  L++ GC+++        NP H +   DI
Sbjct: 238 SLEDLNMYGCSKV------FKNPMHLKKKHDI 315


>AW267887 weakly similar to GP|22037367|gb| disease resistance-like protein
           GS4B-1 {Glycine max}, partial (34%)
          Length = 609

 Score = 56.2 bits (134), Expect = 5e-09
 Identities = 31/92 (33%), Positives = 49/92 (52%)
 Frame = +2

Query: 4   FLKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSL 63
           ++K L L++ +YL + P+  G   LE+L F  C NL+ +H S+G L  L  L  + C  L
Sbjct: 155 YMKVLKLNSCQYLTQIPDVSGLPNLEKLSFQFCENLITIHNSVGFLNRLEILDAKYCIKL 334

Query: 64  VSLYLGTVCELNSLRILHLSGCTRLESTPNFI 95
            S+      +L  L+ L L+ C  L+S P  +
Sbjct: 335 QSV---PPLQLPCLKRLELAMCKSLKSFPELL 421


>BI265594 weakly similar to GP|9965103|gb| resistance protein LM6 {Glycine
           max}, partial (15%)
          Length = 664

 Score = 55.8 bits (133), Expect = 6e-09
 Identities = 35/99 (35%), Positives = 50/99 (50%)
 Frame = +2

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           +K L L +++YL   P+  G Q LE+  F  C NL+ +  SIG L +L  LS  GCS L 
Sbjct: 194 MKVLTLDDNEYLTHIPDLSGLQNLEKFSFKYCENLITIDNSIGHLNKLERLSAFGCSKLE 373

Query: 65  SLYLGTVCELNSLRILHLSGCTRLESTPNFIGNPSHFRC 103
                    L SL+ L+L  C  L+S P  +   ++  C
Sbjct: 374 RF---PPLGLASLKELNLCCCDSLKSFPKLLCEMTNIDC 481


>TC84469 similar to GP|9858483|gb|AAG01054.1| resistance protein MG55
           {Glycine max}, partial (39%)
          Length = 735

 Score = 55.1 bits (131), Expect = 1e-08
 Identities = 34/85 (40%), Positives = 49/85 (57%)
 Frame = +3

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           LK L+LS+S +L +TP+F     LE+L    C  L QV  SIG L ++  ++L+ C SL 
Sbjct: 189 LKILNLSHSHHLTQTPDFSYLPNLEKLVLEDCPRLSQVSHSIGHLKKVVLINLKDCISLC 368

Query: 65  SLYLGTVCELNSLRILHLSGCTRLE 89
           SL    +  L +L  L LSGC  ++
Sbjct: 369 SL-PRNIYTLKTLNTLILSGCLMID 440


>TC92944 similar to GP|9858483|gb|AAG01054.1| resistance protein MG55
           {Glycine max}, partial (12%)
          Length = 673

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 32/83 (38%), Positives = 50/83 (59%)
 Frame = +3

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           LK L+LS+S  L  TP+F     LE+L    C +L  V  +IG L ++  ++L+ C+ L 
Sbjct: 324 LKILNLSHSHNLRHTPDFSKLPNLEKLILKDCPSLSSVSSNIGHLKKILLINLKDCTGLR 503

Query: 65  SLYLGTVCELNSLRILHLSGCTR 87
            L   ++ +L+SL+ L LSGCT+
Sbjct: 504 ELPR-SIYKLDSLKTLILSGCTK 569


>BG649113 similar to GP|18033111|gb functional candidate resistance protein
           KR1 {Glycine max}, partial (2%)
          Length = 782

 Score = 53.1 bits (126), Expect = 4e-08
 Identities = 36/116 (31%), Positives = 57/116 (49%)
 Frame = +1

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           +K L L + +YL   P+      LE+L F  C NL+ +H SIG L++L  LS+ G   L 
Sbjct: 70  MKILTLDDCEYLTHIPDVSSLSNLEKLSFEHCKNLITIHNSIGHLSKLERLSVTGYRKLK 249

Query: 65  SLYLGTVCELNSLRILHLSGCTRLESTPNFIGNPSHFRCGFDIVVPGNKIPYWFDS 120
                    L SL+ L+L G + LE+ P  +   +H +      +   K+P+ F +
Sbjct: 250 HF---PPLGLASLKELNLMGGSCLENFPELLCKMAHIKEIDIFYISIGKLPFSFQN 408


>TC83637 similar to GP|9279731|dbj|BAB01321.1 disease resistance protein
          RPP1-WsB {Arabidopsis thaliana}, partial (2%)
          Length = 1045

 Score = 52.8 bits (125), Expect = 5e-08
 Identities = 35/84 (41%), Positives = 46/84 (54%)
 Frame = +3

Query: 5  LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
          LK + +S +  L E P+F  +  L+ L  T C NL  VHPSI  L +L  L L GC SL 
Sbjct: 6  LKEVTISLAS-LKELPDFSKATNLKVLTVTVCPNLESVHPSIFTLEKLVRLDLGGCRSLT 182

Query: 65 SLYLGTVCELNSLRILHLSGCTRL 88
          +    +   L+SL  L LSGC +L
Sbjct: 183TFTSNS--NLSSLHYLSLSGCEKL 248



 Score = 29.6 bits (65), Expect = 0.48
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 18/106 (16%)
 Frame = +3

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTEL--------AFLS 56
           L RLDL   + L    +      L  L  +GC  L +   ++  + EL        A  S
Sbjct: 144 LVRLDLGGCRSLTTFTSNSNLSSLHYLSLSGCEKLSEFSVTLENIVELDLSWCPINALPS 323

Query: 57  LEGC-SSLVSLYL---------GTVCELNSLRILHLSGCTRLESTP 92
             GC S+L +L L          ++ +L  LR L++ GC +L + P
Sbjct: 324 SFGCQSNLETLVLKATQIESIPSSIKDLTRLRKLNICGCKKLLALP 461


>TC92005 weakly similar to GP|18033111|gb|AAL56987.1 functional candidate
          resistance protein KR1 {Glycine max}, partial (7%)
          Length = 858

 Score = 52.0 bits (123), Expect = 9e-08
 Identities = 32/90 (35%), Positives = 43/90 (47%)
 Frame = +1

Query: 6  KRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLVS 65
          K L L + +YL   P+  G   +E+  F  C NL+ +  SIG   +L F+S  GCS L  
Sbjct: 1  KVLTLDDCEYLTHIPDVSGLSNIEKFSFKFCRNLITIDDSIGHQNKLEFISAIGCSKLKR 180

Query: 66 LYLGTVCELNSLRILHLSGCTRLESTPNFI 95
                  L SL+ L LS C  L S P  +
Sbjct: 181F---PPLGLASLKELELSFCVSLNSFPELL 261


>BF646616 similar to GP|9965103|gb|A resistance protein LM6 {Glycine max},
           partial (5%)
          Length = 671

 Score = 51.6 bits (122), Expect = 1e-07
 Identities = 33/91 (36%), Positives = 42/91 (45%)
 Frame = +2

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           LK L L   +YL +  N      LE   F  C NL+ +H SIG L +L  +   GC  L 
Sbjct: 170 LKVLILDRCQYLTDISNVSNLPNLEEFSFQDCKNLITIHNSIGHLNKLEIIRATGCCKLE 349

Query: 65  SLYLGTVCELNSLRILHLSGCTRLESTPNFI 95
           S        L SL+ L LS C  L+S P  +
Sbjct: 350 SF---PPLLLPSLKELELSYCESLKSFPELL 433


>TC79857 
          Length = 1217

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 31/91 (34%), Positives = 44/91 (48%)
 Frame = +3

Query: 5   LKRLDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLV 64
           +K L   N + L+ TP+      LE+  F  C NL+ +H S+  L  L  L+ EGC  L 
Sbjct: 207 MKVLIFDNCQDLIYTPDVSWLPNLEKFSFARCHNLVTIHNSLRYLNRLEILNAEGCEKLE 386

Query: 65  SLYLGTVCELNSLRILHLSGCTRLESTPNFI 95
           S       +  SL+ L LS C  L+S P  +
Sbjct: 387 SF---PPLQSPSLQNLELSNCKSLKSFPELL 470


>BF646053 weakly similar to GP|18033111|g functional candidate resistance
           protein KR1 {Glycine max}, partial (9%)
          Length = 644

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 32/88 (36%), Positives = 44/88 (49%)
 Frame = +3

Query: 8   LDLSNSKYLMETPNFDGSQRLERLDFTGCTNLLQVHPSIGLLTELAFLSLEGCSSLVSLY 67
           L L + +YL   P+  G   LE+L F  C NL+ +H SIG L +L  LS  GC  L    
Sbjct: 90  LILDHCEYLTHIPDVSGLSNLEKLSFECCYNLITIHNSIGHLNKLERLSAFGCRKLKRF- 266

Query: 68  LGTVCELNSLRILHLSGCTRLESTPNFI 95
                 L SL+ L +  C+ L+S P  +
Sbjct: 267 --PPLGLASLKELDICCCSSLKSFPELL 344


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.325    0.143    0.458 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,881,091
Number of Sequences: 36976
Number of extensions: 93227
Number of successful extensions: 636
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of query: 149
length of database: 9,014,727
effective HSP length: 87
effective length of query: 62
effective length of database: 5,797,815
effective search space: 359464530
effective search space used: 359464530
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.4 bits)


Lotus: description of TM0388b.3