TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0382.4
         (684 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG586306 weakly similar to GP|15128241|db helicase-like protein ...    91  1e-18
BQ150671                                                               29  5.2

>BG586306 weakly similar to GP|15128241|db helicase-like protein {Oryza
           sativa (japonica cultivar-group)}, partial (2%)
          Length = 667

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 3/208 (1%)
 Frame = +2

Query: 74  FKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFIL--SAQNCHRIGSLIPPKGAPAKFT 131
           F++ IR  N++ +FTS+G  ++  +   N P R+ +    Q  HRI SLIP +G P ++ 
Sbjct: 11  FRDTIRVYNSVLAFTSIGMKMDYSVV--NAPGRYTIRIQGQTHHRIDSLIPRQGRPPEYL 184

Query: 132 QLYIYDTHNEFSNRMKIFRYFLNYLQIYEQNLYLDVMVADAKFLLSFFYISSSSRKSPLD 191
           Q+YI+DT NE  NR+                                  +  +S +  LD
Sbjct: 185 QIYIFDTGNEVRNRLNA--------------------------------MGQTSTEGNLD 268

Query: 192 PSLMKDLTALIDKDNELAKMFQRVKDFVETDGSSNFYLKLYCNKTKDPRTYNMPTADEVA 251
            + +  L  +ID++N LAK+F+R +D+ +  G   F ++L  +K K  + Y++P+  EVA
Sbjct: 269 ETTLARLIEMIDENNCLAKLFRRARDYYKGSG-QEFNIRLLSDKGKG-KEYDLPSTSEVA 442

Query: 252 ALIIGDL-DTVNEGNIIVKGTDGGFQRL 278
            LI+GD+  T+   +I+V+      Q++
Sbjct: 443 GLIVGDMSSTIGVRDIVVQFQSDTLQQI 526


>BQ150671 
          Length = 948

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 21/67 (31%), Positives = 33/67 (48%)
 Frame = -3

Query: 60  LYNLMNEINDRYKNFKENIRA*NNLFSFTSLGGNVESGINDGNDPPRFILSAQNCHRIGS 119
           +Y+++NE     +     I  *+ LF  T   G+ E  +N+G +PP ++     C RI  
Sbjct: 349 IYHMINEWG---RGLHNAISE*SGLFFCT---GHTEKKVNNGTNPPGYL-----CFRIFL 203

Query: 120 LIPPKGA 126
           L P  GA
Sbjct: 202 LAPGHGA 182


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.345    0.151    0.500 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,246,066
Number of Sequences: 36976
Number of extensions: 354962
Number of successful extensions: 3313
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 1481
Number of HSP's gapped (non-prelim): 2018
length of query: 684
length of database: 9,014,727
effective HSP length: 103
effective length of query: 581
effective length of database: 5,206,199
effective search space: 3024801619
effective search space used: 3024801619
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 62 (28.5 bits)