Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0378b.5
         (572 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BI309340 weakly similar to GP|13605829|gb AT5g04550/T32M21_140 {...   146  2e-35
TC82320 similar to GP|8953735|dbj|BAA98099.1 contains similarity...   143  2e-34
BQ139562                                                              128  5e-30
TC89130 similar to GP|12003396|gb|AAG43555.1 Avr9/Cf-9 rapidly e...   107  1e-23
BG645895 weakly similar to GP|7939524|dbj contains similarity to...    96  4e-20
AW329706 weakly similar to GP|7939524|dbj| contains similarity t...    54  2e-07
BE942366 similar to GP|7939524|dbj| contains similarity to unkno...    52  5e-07
TC93690 similar to PIR|D86467|D86467 protein F23M19.3 [imported]...    52  8e-07
TC83228 weakly similar to GP|8953735|dbj|BAA98099.1 contains sim...    50  2e-06
TC93869 weakly similar to GP|20466802|gb|AAM20718.1 unknown prot...    50  2e-06
TC91715 weakly similar to GP|20466802|gb|AAM20718.1 unknown prot...    47  2e-05
BQ122396 similar to GP|7939524|dbj| contains similarity to unkno...    39  0.007
BQ137291 similar to GP|13605829|gb| AT5g04550/T32M21_140 {Arabid...    33  0.30
TC84009 similar to GP|13548324|emb|CAC35871. putative protein {A...    33  0.39
TC91357 similar to GP|2194137|gb|AAB61112.1| ESTs gb|R29947 gb|H...    32  0.66
TC90357 similar to GP|20466802|gb|AAM20718.1 unknown protein {Ar...    32  0.66
TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {...    32  0.66
BE325721 similar to SP|P49147|PA2Y_ Cytosolic phospholipase A2 (...    30  2.5
TC86402 homologue to GP|15148926|gb|AAK84890.1 TGA-type basic le...    29  4.3
CB892620 weakly similar to GP|22655012|g At1g73080/F3N23_28 {Ara...    28  7.3

>BI309340 weakly similar to GP|13605829|gb AT5g04550/T32M21_140 {Arabidopsis
           thaliana}, partial (27%)
          Length = 574

 Score =  146 bits (368), Expect = 2e-35
 Identities = 72/164 (43%), Positives = 108/164 (64%), Gaps = 4/164 (2%)
 Frame = +2

Query: 10  SWLSALWPVSRKGASDNKAVVVGVLGSEVAGLMLKVVNLWQSLSDEEVLSLREGIVNSAG 69
           SW  +LW   RK  ++++  V+GVL  E+A LM K+VNLWQSLSD+ +  L+E I NS G
Sbjct: 95  SWFRSLWRTPRKHDANSEKEVIGVLAFEIASLMSKLVNLWQSLSDKHISRLKEEITNSIG 274

Query: 70  VRKLVSEDDDYLMELVLNEVLDNFQSVARTVARLGRRCVDPVYHRFEH----FVRSPAQN 125
           ++KLVS+DD ++  L+  E+++N   VA +VARL ++C DP+   FE+    F+ +    
Sbjct: 275 IKKLVSDDDHFIERLICMEIVENMAHVAESVARLAKKCNDPILKGFENTFYGFITTGTDP 454

Query: 126 YFQWSGWDYRGKKMERKVKRMEKFVAAMTQLCQELEVLAEVEQT 169
           Y    GW+   KKME+K+K+ EKF++    L QE+EVL ++EQT
Sbjct: 455 Y----GWELTCKKMEKKIKKFEKFISTNASLYQEMEVLVDLEQT 574


>TC82320 similar to GP|8953735|dbj|BAA98099.1 contains similarity to unknown
           protein~emb|CAB85560.1~gene_id:K10D11.2 {Arabidopsis
           thaliana}, partial (30%)
          Length = 875

 Score =  143 bits (361), Expect = 2e-34
 Identities = 80/168 (47%), Positives = 110/168 (64%), Gaps = 1/168 (0%)
 Frame = +1

Query: 393 LKPASFTLGDAALTLHYANMIVLIEQMVSSPHLTDPEPRDDLYKMLPATIRAVLRHKLKG 452
           LKP   +LGD+ L+LHYAN+I+++E+M+ SP L   + RDDLY MLP +IR+ LR +LKG
Sbjct: 187 LKPPKGSLGDSGLSLHYANLIIVMEKMIKSPQLVGVDARDDLYAMLPNSIRSSLRLRLKG 366

Query: 453 RKKSKSSWVYNAEIAAEWSAVLAQILDWLAPLAHDTIRWHSVRSF-EKEHATLKANILLV 511
              S      +  +A EW   L +IL WL PLA + IRW S RS  EK     K+N+LL+
Sbjct: 367 ---SIGFSACDPLLANEWKNALGRILCWLLPLAQNMIRWQSERSVEEKSLVPKKSNVLLL 537

Query: 512 QTLYFANQVKTEAAIVDLLVGLNYVCRIDTKVGVRDRVECASARSFHG 559
           QTL FA++ KTEAAI +LLVGLNYV R + ++  +   +C    +F+G
Sbjct: 538 QTLVFADKAKTEAAITELLVGLNYVWRFEREMTAKALFQCTD--NFNG 675


>BQ139562 
          Length = 389

 Score =  128 bits (322), Expect = 5e-30
 Identities = 64/111 (57%), Positives = 86/111 (76%)
 Frame = +3

Query: 1   MGGETVNGSSWLSALWPVSRKGASDNKAVVVGVLGSEVAGLMLKVVNLWQSLSDEEVLSL 60
           M GETVN  +WL  +WPVSRK  SD    + G++  EVAGLM KVVNLW SLSD E+++L
Sbjct: 63  MKGETVN-VTWLGGIWPVSRKSGSDENNEI-GIMAFEVAGLMSKVVNLWHSLSDNELMNL 236

Query: 61  REGIVNSAGVRKLVSEDDDYLMELVLNEVLDNFQSVARTVARLGRRCVDPV 111
           RE IV+S GV+ LVS+D+ +LMEL  NE+L+NFQS++++VARL ++C DP+
Sbjct: 237 REWIVSSVGVKMLVSDDEYFLMELTRNEILNNFQSLSQSVARLSKKCKDPM 389


>TC89130 similar to GP|12003396|gb|AAG43555.1 Avr9/Cf-9 rapidly elicited
           protein 137 {Nicotiana tabacum}, partial (5%)
          Length = 1159

 Score =  107 bits (267), Expect = 1e-23
 Identities = 64/239 (26%), Positives = 124/239 (51%), Gaps = 9/239 (3%)
 Frame = +1

Query: 18  VSRKGASDNKAVVVGVLGSEVAGLMLKVVNLWQSLSDEEVLSLREGIVNSAGVRKLVSED 77
           +SR+  +  +   +G+L  +    M ++++L+ SLSDEE+  L + +V S GV  L S  
Sbjct: 121 MSRRPKTMPEPETLGILAFDAGKTMCRLISLYSSLSDEEITKLLDEVVKSKGVTYLNSNQ 300

Query: 78  DDYLMELVLNEVLDNFQSVARTVARLGRRCVDPVYHRFEHFVRSPAQNYFQWSGWDYRGK 137
           +++L+ L   E L+   ++A TV+R+G +C D    RF+       Q         Y  +
Sbjct: 301 ENFLLTLAAAERLEELDNIAVTVSRIGEKCCDLGLARFDLVYADLKQGVIDLRKLPYNSR 480

Query: 138 KMERKVKRMEKFVAAMTQLCQELEVLAEVEQTLRRMQ---------ANPVLHRGKLPEFQ 188
              + +++ EK ++A + L   +E +AE+E   ++ Q           P L +  +  F 
Sbjct: 481 SSIKIIEKAEKLISATSSLYSAMEYMAELEAAEKKRQQQQRYWNTTTKPSL-KPNMEYFN 657

Query: 189 KKVTLQRQEVRNLRDMSPWNRSYDYVVRLLVRSLFTILERIILVFGNNHLATKQNENES 247
           +K+  QR++V+N ++ S W +++D  V ++ R +  +  RI  VFG  ++  +Q+EN +
Sbjct: 658 EKLVFQRKQVQNFKETSLWKQTFDKTVGIMARLVCIVYARICSVFG-AYINEEQDENNN 831


>BG645895 weakly similar to GP|7939524|dbj contains similarity to unknown
           protein~gb|AAD25764.1~gene_id:K14B15.5 {Arabidopsis
           thaliana}, partial (28%)
          Length = 681

 Score = 95.9 bits (237), Expect = 4e-20
 Identities = 50/132 (37%), Positives = 75/132 (55%)
 Frame = +1

Query: 21  KGASDNKAVVVGVLGSEVAGLMLKVVNLWQSLSDEEVLSLREGIVNSAGVRKLVSEDDDY 80
           K   + K   +G+L  EVA +M K + L++SLS+ E+  LR  I+NS GVR LVS ++ Y
Sbjct: 286 KRKENKKVETIGILSFEVANVMSKTIQLYKSLSESEITKLRNEILNSEGVRNLVSSEEGY 465

Query: 81  LMELVLNEVLDNFQSVARTVARLGRRCVDPVYHRFEHFVRSPAQNYFQWSGWDYRGKKME 140
           L ELV  E L+    VA  V+RLG++C  P    FEH            + + +  K ME
Sbjct: 466 LFELVRREKLEELNRVAGVVSRLGKKCSVPALQGFEHVYGDIVSGVIDVNEFGFLVKHME 645

Query: 141 RKVKRMEKFVAA 152
             V++M+++V+A
Sbjct: 646 GMVRKMDRYVSA 681


>AW329706 weakly similar to GP|7939524|dbj| contains similarity to unknown
           protein~gb|AAD25764.1~gene_id:K14B15.5 {Arabidopsis
           thaliana}, partial (9%)
          Length = 445

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 38/128 (29%), Positives = 73/128 (56%), Gaps = 2/128 (1%)
 Frame = +2

Query: 168 QTLRRMQANPVLHRGKLPEFQKKVTLQRQEVRNLRDMSPWNRSYDYVVRLLVRSLFTILE 227
           +T+++ Q N      +   F++++  Q+Q+VR L+++S WN+++D VV LL R++ T+  
Sbjct: 11  ETVKKFQNNSQNEESRRG-FEQRLVWQKQDVRQLKEISLWNQTFDKVVELLARTVCTLYA 187

Query: 228 RIILVFGNNHLATKQNENESPNTTANNLLRSQ--SFSVFMHSSVHPSENDLYGFHSGHLG 285
           RI +VFG++    +++     N   + L++++  S S  ++  V+ SE  L   HS   G
Sbjct: 188 RICMVFGDS--TVRKDGLGIGNCEGSPLVQNECGSASSLINVEVNLSEK-LKRSHSKKTG 358

Query: 286 RRLASNSG 293
             L+S  G
Sbjct: 359 YNLSSIGG 382


>BE942366 similar to GP|7939524|dbj| contains similarity to unknown
           protein~gb|AAD25764.1~gene_id:K14B15.5 {Arabidopsis
           thaliana}, partial (12%)
          Length = 391

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 22/36 (61%), Positives = 30/36 (83%)
 Frame = +3

Query: 505 KANILLVQTLYFANQVKTEAAIVDLLVGLNYVCRID 540
           + N+LL QTLYFA+++KTE AI +LL GLNY+CR +
Sbjct: 18  RTNVLLFQTLYFADKIKTEEAICELLKGLNYICRYE 125


>TC93690 similar to PIR|D86467|D86467 protein F23M19.3 [imported] -
           Arabidopsis thaliana, partial (23%)
          Length = 485

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 32/93 (34%), Positives = 46/93 (49%)
 Frame = +3

Query: 400 LGDAALTLHYANMIVLIEQMVSSPHLTDPEPRDDLYKMLPATIRAVLRHKLKGRKKSKSS 459
           LG A L LHYAN+++ I+ +V+         RD LY+ LP  I+  LR KL       S 
Sbjct: 156 LGPAGLALHYANIVLQIDTLVARSISMPANTRDTLYQNLPPNIKLALRSKLP------SF 317

Query: 460 WVYNAEIAAEWSAVLAQILDWLAPLAHDTIRWH 492
            V      A+    + + L WL P+A +T + H
Sbjct: 318 HVVEELTVADIKDEMEKTLHWLGPIATNTSKAH 416


>TC83228 weakly similar to GP|8953735|dbj|BAA98099.1 contains similarity to
           unknown protein~emb|CAB85560.1~gene_id:K10D11.2
           {Arabidopsis thaliana}, partial (8%)
          Length = 974

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/51 (45%), Positives = 36/51 (70%)
 Frame = +3

Query: 31  VGVLGSEVAGLMLKVVNLWQSLSDEEVLSLREGIVNSAGVRKLVSEDDDYL 81
           V VL  E+AG+M K+++L+QSLSD  ++ +R   V   GVRK++S D+ +L
Sbjct: 384 VAVLAFEIAGVMSKLLHLFQSLSDATIVRIRNDAVTLEGVRKIISNDESFL 536


>TC93869 weakly similar to GP|20466802|gb|AAM20718.1 unknown protein
           {Arabidopsis thaliana}, partial (29%)
          Length = 686

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 45/183 (24%), Positives = 72/183 (38%), Gaps = 10/183 (5%)
 Frame = +1

Query: 73  LVSEDDDYLMELVLNEVLDNFQSVARTVARLGRRCVDPVYHRFEHFVRSPAQNYFQWSGW 132
           LVS D   L+  V  +  + F + +R VAR G  C DP +H  +         YF    +
Sbjct: 1   LVSTDTKELISFVEADKREEFNAFSREVARFGNICKDPQWHNLD--------RYFSRLDF 156

Query: 133 DYRGKKM-----ERKVKRMEKFVAAMTQLCQELEVLAEVEQTLRRMQ-----ANPVLHRG 182
           D    K      E+ V+ +        +L  EL  L   +Q   +        N  L+  
Sbjct: 157 DALSNKQPRVEAEKTVQDLSSLAQNTAELYHELNALDRFQQDYNQKVKELEFLNLPLNGE 336

Query: 183 KLPEFQKKVTLQRQEVRNLRDMSPWNRSYDYVVRLLVRSLFTILERIILVFGNNHLATKQ 242
            L  F  ++  QR+ V++L+  S W++  + +V  LV       + I    G N     +
Sbjct: 337 GLAAFHSELKHQRKLVKSLQRKSLWSKHLEEIVEKLVEVATHTHQAIFEFLGKNGKIAVK 516

Query: 243 NEN 245
           N N
Sbjct: 517 NRN 525



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 27/61 (44%), Positives = 34/61 (55%)
 Frame = +1

Query: 386 KLSMSNRLKPASFTLGDAALTLHYANMIVLIEQMVSSPHLTDPEPRDDLYKMLPATIRAV 445
           K+++ NR  P    LG+A L LHYAN+I  I  + S P +  P  RD LYK LP  I   
Sbjct: 502 KIAVKNRNGPER--LGEAGLALHYANIINQINVIASRPTILPPNMRDTLYKGLPNNIXNA 675

Query: 446 L 446
           L
Sbjct: 676 L 678


>TC91715 weakly similar to GP|20466802|gb|AAM20718.1 unknown protein
           {Arabidopsis thaliana}, partial (26%)
          Length = 744

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 24/52 (46%), Positives = 32/52 (61%)
 Frame = +3

Query: 400 LGDAALTLHYANMIVLIEQMVSSPHLTDPEPRDDLYKMLPATIRAVLRHKLK 451
           LG+A L LHYANMI  I  + S P    P  RD LY+ LP +I++ L  +L+
Sbjct: 588 LGEAGLALHYANMINQIYMIASRPASLPPNTRDTLYQGLPNSIKSALPSRLQ 743



 Score = 32.0 bits (71), Expect = 0.66
 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
 Frame = +3

Query: 140 ERKVKRMEKFVAAMTQLCQELEVLA----EVEQTLRRMQA-NPVLHRGKLPEFQKKVTLQ 194
           E+ ++     V    +L  EL        + +Q ++ M++ N  L    +  FQ ++  Q
Sbjct: 243 EKTMQEFTSLVHHTAELYHELSAYERFQHDYQQKIKEMESLNLPLKGESITIFQSELKHQ 422

Query: 195 RQEVRNLRDMSPWNRSYDYVVRLLVRSLFTILERIILVFGNNHLATKQN 243
           ++ V NL+  S W+R  + +V  LV  +  I + I  + GN+     +N
Sbjct: 423 KKLVTNLKKKSLWSRYLEEIVEKLVDIVTYIHQAIRELLGNHGTGAVKN 569


>BQ122396 similar to GP|7939524|dbj| contains similarity to unknown
           protein~gb|AAD25764.1~gene_id:K14B15.5 {Arabidopsis
           thaliana}, partial (7%)
          Length = 498

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 16/29 (55%), Positives = 24/29 (82%)
 Frame = +2

Query: 397 SFTLGDAALTLHYANMIVLIEQMVSSPHL 425
           S TLG +AL LHYAN+I++I++++  PHL
Sbjct: 407 SSTLGGSALALHYANVIIVIKKLLRYPHL 493


>BQ137291 similar to GP|13605829|gb| AT5g04550/T32M21_140 {Arabidopsis
           thaliana}, partial (3%)
          Length = 985

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 15/29 (51%), Positives = 23/29 (78%)
 Frame = +1

Query: 31  VGVLGSEVAGLMLKVVNLWQSLSDEEVLS 59
           V VL  E+AG+M K+++L+QSLSD  ++S
Sbjct: 85  VAVLAFEIAGVMSKLLHLFQSLSDATIVS 171


>TC84009 similar to GP|13548324|emb|CAC35871. putative protein {Arabidopsis
           thaliana}, partial (12%)
          Length = 737

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +3

Query: 36  SEVAGLMLKVVNLWQSLSDEEVLSLREGIVNSAGVRKLVSEDDDYLMELV 85
           S +  L+ K  +L +SLS + +  L+E ++ S  V  LVS+D D L+ +V
Sbjct: 549 SRLQTLLSKXFHLLESLSTKSIRHLKEEVLLSETVHDLVSKDKDELLTIV 698


>TC91357 similar to GP|2194137|gb|AAB61112.1| ESTs gb|R29947 gb|H76702 come
           from this gene. {Arabidopsis thaliana}, partial (40%)
          Length = 766

 Score = 32.0 bits (71), Expect = 0.66
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
 Frame = +3

Query: 227 ERIILVFG------NNHLATKQNENESPNTTANNLLRSQSFSVFMHSSVHPSENDLYGFH 280
           E+ I++FG      NNHL T      + NTT NN  R  +    +     P   D    H
Sbjct: 285 EKSIMIFGVRLTGGNNHLNTT-----TTNTTINNSFRKSASMTNLSQYEQPPPQDSNPAH 449

Query: 281 SGHLGRRLASNSGILVDKKQ 300
           +G++   +   SG   ++K+
Sbjct: 450 AGYVSHDIVHASGRSRERKR 509


>TC90357 similar to GP|20466802|gb|AAM20718.1 unknown protein {Arabidopsis
           thaliana}, partial (6%)
          Length = 736

 Score = 32.0 bits (71), Expect = 0.66
 Identities = 13/46 (28%), Positives = 31/46 (67%)
 Frame = +2

Query: 491 WHSVRSFEKEHATLKANILLVQTLYFANQVKTEAAIVDLLVGLNYV 536
           W +  +   ++ T ++N + +QTLY+A++ K +  I++LLV ++++
Sbjct: 50  WANTSNDFGDNTTKESNPIRLQTLYYADKQKIDVYIIELLVWIHHL 187


>TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {Arabidopsis
            thaliana}, partial (62%)
          Length = 2237

 Score = 32.0 bits (71), Expect = 0.66
 Identities = 26/82 (31%), Positives = 35/82 (41%), Gaps = 15/82 (18%)
 Frame = -1

Query: 380  RIRIYSKLSM----SNRLKP--------ASFTLGDAALTLHYANMIVLIEQMVSSP---H 424
            RI IY KL      +N LK         + F  G    T+HYAN  VL++Q+  +    H
Sbjct: 2162 RIDIYKKLRFCRLHNNLLKGTCWK*S*ISKFIYGKTLDTIHYANTKVLVKQVTKNKGQLH 1983

Query: 425  LTDPEPRDDLYKMLPATIRAVL 446
            LT P  R       P  I + +
Sbjct: 1982 LTHPSRRSGHSSFHPTKIESTI 1917


>BE325721 similar to SP|P49147|PA2Y_ Cytosolic phospholipase A2 (CPLA2)
           [Includes: Phospholipase A2 (EC 3.1.1.4) (CPLA2),
           partial (2%)
          Length = 654

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/31 (38%), Positives = 19/31 (60%)
 Frame = +1

Query: 220 RSLFTILERIILVFGNNHLATKQNENESPNT 250
           +S F  L  +I++FG+ H   K N+N +P T
Sbjct: 22  KSTFFSLSLLIIIFGSKHGKRKPNQNSNPRT 114


>TC86402 homologue to GP|15148926|gb|AAK84890.1 TGA-type basic leucine zipper
            protein TGA2.2 {Phaseolus vulgaris}, partial (96%)
          Length = 1970

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 24/101 (23%), Positives = 46/101 (44%), Gaps = 1/101 (0%)
 Frame = +3

Query: 83   ELVLNEVLDNFQSVARTVARL-GRRCVDPVYHRFEHFVRSPAQNYFQWSGWDYRGKKMER 141
            ++ L  ++DNF +    + RL G      V+H      ++PA+  F W G    G +   
Sbjct: 912  DIELRTIVDNFMTQFEDIYRLKGVAAKADVFHILSGMWKTPAERCFMWIG----GFRSSE 1079

Query: 142  KVKRMEKFVAAMTQLCQELEVLAEVEQTLRRMQANPVLHRG 182
             +K +   +  +T+  Q+L  +  ++Q+    QA   L +G
Sbjct: 1080 LLKLLVSHLEPLTE--QQLMGIYNLQQS--SQQAEDALSQG 1190


>CB892620 weakly similar to GP|22655012|g At1g73080/F3N23_28 {Arabidopsis
           thaliana}, partial (9%)
          Length = 704

 Score = 28.5 bits (62), Expect = 7.3
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 13/83 (15%)
 Frame = +1

Query: 169 TLRRMQANPVLHRGKLPEFQKKVTLQRQEVR-------------NLRDMSPWNRSYDYVV 215
           TLRR+  N     G LP+F   + L+  ++              N  +++  N S +   
Sbjct: 133 TLRRLFLNQNNFTGSLPDFASNLNLKYMDISKNNISGPIPSSLGNCTNLTYINLSRNKFA 312

Query: 216 RLLVRSLFTILERIILVFGNNHL 238
           RL+   L  +L  +IL   +N+L
Sbjct: 313 RLIPSELGNLLNLVILELSHNNL 381


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,461,721
Number of Sequences: 36976
Number of extensions: 209909
Number of successful extensions: 1075
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of query: 572
length of database: 9,014,727
effective HSP length: 101
effective length of query: 471
effective length of database: 5,280,151
effective search space: 2486951121
effective search space used: 2486951121
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)


Lotus: description of TM0378b.5