TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0372b.7
         (224 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86818 similar to GP|21593515|gb|AAM65482.1 unknown {Arabidopsi...   415  e-117
TC89906 weakly similar to GP|12083292|gb|AAG48805.1 unknown prot...   107  5e-37
TC87113 weakly similar to GP|8649004|emb|CAB94852.1 lipoxygenase...    28  2.2
TC82858 weakly similar to PIR|E96803|E96803 probable lipase  416...    28  2.8
TC82986 similar to GP|21554086|gb|AAM63167.1 unknown {Arabidopsi...    27  8.2
TC86635 weakly similar to GP|9758600|dbj|BAB09233.1 gene_id:MDF2...    27  8.2

>TC86818 similar to GP|21593515|gb|AAM65482.1 unknown {Arabidopsis
           thaliana}, partial (80%)
          Length = 949

 Score =  415 bits (1066), Expect = e-117
 Identities = 192/224 (85%), Positives = 208/224 (92%)
 Frame = +1

Query: 1   MVFWVFGYGSLVWNPGFEYDEKVIGYIKDYRRVFDLACIDHRGTPEHPARTCTLEEKEGE 60
           MVFWVFGYGSLVWNPGF+YDEK++G+IKDYRRVFDLACIDHRGTPE+PARTCTLEEKEGE
Sbjct: 130 MVFWVFGYGSLVWNPGFDYDEKMLGFIKDYRRVFDLACIDHRGTPENPARTCTLEEKEGE 309

Query: 61  ICWGAVYCVRGGPEKEKLVMQYLERRECEYDHKTLVDFYKEGDSSHPALTGVIVFTSTPD 120
           ICWG  YCVRGGPEKEKL MQYLERRECEYD KTLV+FYKEGDS HPALTGVIVFTSTPD
Sbjct: 310 ICWGVAYCVRGGPEKEKLAMQYLERRECEYDQKTLVNFYKEGDSLHPALTGVIVFTSTPD 489

Query: 121 KVNNKYYLGPAPLDVMARQIATAHGPCGNNRDYLFLLEKAMHNIGHEDDMVIELAHEVRK 180
           K NN YYLGPAPL+ MARQIATA+GPCGNNRDYLFLLEKAMHN+GHEDD+VIELA+EVRK
Sbjct: 490 KENNIYYLGPAPLEDMARQIATANGPCGNNRDYLFLLEKAMHNLGHEDDLVIELANEVRK 669

Query: 181 VLGVGNVLPNDKKLSGPVQIQHSPHAPIPALQLLPMPEPIALDS 224
           VLGV NV+ N+KKL GP Q+ H PH PIP+LQL P+PEPIALDS
Sbjct: 670 VLGVVNVVLNEKKLVGPTQLPHQPHVPIPSLQLHPLPEPIALDS 801


>TC89906 weakly similar to GP|12083292|gb|AAG48805.1 unknown protein
           {Arabidopsis thaliana}, partial (79%)
          Length = 739

 Score =  107 bits (268), Expect(2) = 5e-37
 Identities = 53/109 (48%), Positives = 77/109 (70%)
 Frame = +3

Query: 74  EKEKLVMQYLERRECEYDHKTLVDFYKEGDSSHPALTGVIVFTSTPDKVNNKYYLGPAPL 133
           E +++ + YL  RE +YD K  VD + E  ++ PA++G +V+ ++PDK  N  YLGPA +
Sbjct: 141 EDQEIALTYLGVREKQYDRKEYVDVFTELTATTPAISGALVYIASPDKKVNVNYLGPASV 320

Query: 134 DVMARQIATAHGPCGNNRDYLFLLEKAMHNIGHEDDMVIELAHEVRKVL 182
           + +ARQI  A GP G NR+YLFLLEKA+  IG +D  VI+LA+EVR++L
Sbjct: 321 EEIARQIVQAEGPTGPNREYLFLLEKALLQIGCQDKHVIDLANEVRRIL 467



 Score = 63.5 bits (153), Expect(2) = 5e-37
 Identities = 28/41 (68%), Positives = 29/41 (70%)
 Frame = +2

Query: 27 IKDYRRVFDLACIDHRGTPEHPARTCTLEEKEGEICWGAVY 67
          IKDYRRVF     DHRGTPE P R  TLE  +GEICWGA Y
Sbjct: 2  IKDYRRVFYQGSTDHRGTPEFPGRAVTLEPAQGEICWGAAY 124


>TC87113 weakly similar to GP|8649004|emb|CAB94852.1 lipoxygenase {Prunus
           dulcis}, partial (32%)
          Length = 1032

 Score = 28.5 bits (62), Expect = 2.2
 Identities = 11/26 (42%), Positives = 18/26 (68%)
 Frame = +1

Query: 22  KVIGYIKDYRRVFDLACIDHRGTPEH 47
           K IG + ++ RV+D AC +  GTP++
Sbjct: 625 KGIGKLNEWDRVYDYACYNDLGTPDN 702


>TC82858 weakly similar to PIR|E96803|E96803 probable lipase  4162-5963
           [imported] - Arabidopsis thaliana, partial (31%)
          Length = 561

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 9/19 (47%), Positives = 16/19 (83%)
 Frame = -3

Query: 74  EKEKLVMQYLERRECEYDH 92
           +K++  +QYL+RR+C+Y H
Sbjct: 493 QKQQFSLQYLQRRKCKYCH 437


>TC82986 similar to GP|21554086|gb|AAM63167.1 unknown {Arabidopsis
           thaliana}, complete
          Length = 747

 Score = 26.6 bits (57), Expect = 8.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 116 TSTPDKVNNKYYLGPAPL 133
           TS P+++NN++YL   PL
Sbjct: 444 TSFPERINNRFYLSMIPL 391


>TC86635 weakly similar to GP|9758600|dbj|BAB09233.1
           gene_id:MDF20.10~pir||T08929~similar to unknown protein
           {Arabidopsis thaliana}, partial (32%)
          Length = 1963

 Score = 26.6 bits (57), Expect = 8.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 98  FYKEGDSSHPALTGVIVFTSTPDKVNNKYYLGPAPLDVMA 137
           F    DSS      V++F STP++ +  + L P PL+V+A
Sbjct: 924 FSSPSDSSS---VSVVLFFSTPEESSFFFCLFPEPLEVLA 814


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.141    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,994,902
Number of Sequences: 36976
Number of extensions: 117443
Number of successful extensions: 578
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of query: 224
length of database: 9,014,727
effective HSP length: 93
effective length of query: 131
effective length of database: 5,575,959
effective search space: 730450629
effective search space used: 730450629
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)