BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0371b.4
(449 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-... 864 0.0
TC76675 SP|P46259|TBA1_PEA Tubulin alpha-1 chain. [Garden pea] {... 833 0.0
TC76677 homologue to SP|P33629|TBA_PRUDU Tubulin alpha chain. [A... 637 0.0
TC76674 homologue to GP|23452339|gb|AAN33000.1 alpha-tubulin 4 {... 521 e-148
TC91984 homologue to GP|16611919|gb|AAL27406.1 alpha-tubulin {Ar... 434 e-122
TC85408 homologue to PIR|S20869|S20869 tubulin beta-2 chain - ga... 395 e-110
TC85406 SP|P29500|TBB1_PEA Tubulin beta-1 chain. [Garden pea] {P... 394 e-110
TC85405 SP|Q39445|TBB_CICAR Tubulin beta chain. [Chickpea Garba... 393 e-110
TC85410 homologue to PIR|JC2510|JC2510 beta-tubulin R1623 - rice... 391 e-109
BG644366 GP|17402471|em alpha-tubulin {Nicotiana tabacum}, parti... 386 e-108
TC86477 homologue to GP|15408819|dbj|BAB64211. tubulin beta-4 ch... 386 e-107
TC90170 homologue to GP|12963226|gb|AAK11179.1 alpha-tubulin {Co... 380 e-106
BG585014 homologue to GP|12850141|db data source:MGD source key... 350 5e-97
TC77912 homologue to GP|10176853|dbj|BAB10059. beta tubulin {Ara... 220 2e-89
TC85409 homologue to PIR|S20869|S20869 tubulin beta-2 chain - ga... 228 3e-77
TC76678 homologue to SP|P29510|TBA2_ARATH Tubulin alpha-2/alpha-... 235 6e-72
TC84056 homologue to SP|P52273|TBA_BOMMO Tubulin alpha chain. [S... 234 7e-65
TC85407 SP|P28551|TBB3_SOYBN Tubulin beta chain (Fragment). [Soy... 150 2e-53
AW689076 homologue to PIR|JA0048|JA0 tubulin beta-1 chain - soyb... 133 2e-31
CA921757 homologue to SP|Q41784|TBB7 Tubulin beta-7 chain (Beta-... 115 3e-26
>TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-5 chain.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (98%)
Length = 1656
Score = 864 bits (2232), Expect = 0.0
Identities = 417/449 (92%), Positives = 439/449 (96%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE+ISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSD+SVG+++DAFNTFFSETGSGK
Sbjct: 72 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSSVGVAHDAFNTFFSETGSGK 251
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVR+G YRQLFHPEQLISGKEDAANNFARGHYTVG+EIV+LCLD
Sbjct: 252 HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 431
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
Sbjct: 432 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 611
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 612 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 791
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQ+S+PEIT+AVFEP++
Sbjct: 792 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 971
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAV IKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 972 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 1151
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+VVP GDLAKVQRAVCMISNNTAVAEVFSRID+KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 1152SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1331
Query: 421 AREDLAALEKDYEEVGAEGEEGEEDEEGY 449
AREDLAALEKDYEEVGAEG E +E+ E Y
Sbjct: 1332AREDLAALEKDYEEVGAEGAEDDEEGEDY 1418
>TC76675 SP|P46259|TBA1_PEA Tubulin alpha-1 chain. [Garden pea] {Pisum
sativum}, partial (98%)
Length = 1660
Score = 833 bits (2153), Expect = 0.0
Identities = 400/444 (90%), Positives = 427/444 (96%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MP D +VG +DAFNTFFSETG+GK
Sbjct: 108 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 287
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIV+LCLD
Sbjct: 288 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 467
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 468 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 647
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 648 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 827
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQ+S+ EIT++ FEPS+
Sbjct: 828 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1007
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 1008MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1187
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
TVVP GDLAKVQRAVCMISN+T+VAEVFSRID+KFDLMY+KRAFVHWYVGEGME+GEFSE
Sbjct: 1188TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEKGEFSE 1367
Query: 421 AREDLAALEKDYEEVGAEGEEGEE 444
AREDLAALEKDYEEVGAE +G++
Sbjct: 1368AREDLAALEKDYEEVGAESGDGDD 1439
>TC76677 homologue to SP|P33629|TBA_PRUDU Tubulin alpha chain. [Almond
Prunus amygdalus] {Prunus dulcis}, partial (80%)
Length = 1392
Score = 637 bits (1643), Expect(2) = 0.0
Identities = 310/342 (90%), Positives = 329/342 (95%), Gaps = 1/342 (0%)
Frame = +1
Query: 109 TVGREIVELCLDRTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 168
+VG+EIV+LCLDR RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG
Sbjct: 154 SVGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLG 333
Query: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLN 228
FT+YPSPQVST+VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLN
Sbjct: 334 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 513
Query: 229 RLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISI 288
RL+SQVISSLT SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQ+S+
Sbjct: 514 RLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSV 693
Query: 289 PEITSAVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCP 348
EIT++ FEPS+MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVA IKTKRT+QFVDWCP
Sbjct: 694 AEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCP 873
Query: 349 TGFKCGINYQPPTVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWY 408
TGFKCGINYQPPTVVP GDLAKVQRAVCMISN+T+VAEVF RID+KFDLMY+KRAFVHWY
Sbjct: 874 TGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWY 1053
Query: 409 VGEGMEEGEFSEAREDLAALEKDYEEVGAE-GEEGEEDEEGY 449
VGEGMEEGEFSEAREDLAALEKDYEEVGAE GE G+ED + Y
Sbjct: 1054VGEGMEEGEFSEAREDLAALEKDYEEVGAESGEGGDEDMDDY 1179
Score = 47.8 bits (112), Expect(2) = 0.0
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 89 PEQLISGKEDAANNFARGHYT 109
PEQLISGKEDAANNFARGHYT
Sbjct: 5 PEQLISGKEDAANNFARGHYT 67
>TC76674 homologue to GP|23452339|gb|AAN33000.1 alpha-tubulin 4 {Gossypium
hirsutum}, partial (90%)
Length = 970
Score = 521 bits (1342), Expect = e-148
Identities = 253/280 (90%), Positives = 268/280 (95%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE IS+HIGQAGIQVGN+CWELYCLEHGI PDG MPSD ++G +DAFNTFFSETG+GK
Sbjct: 131 MRECISVHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTIGGGDDAFNTFFSETGAGK 310
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYT+G+EIV+LCLD
Sbjct: 311 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 490
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
R RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT+YPSPQVST+
Sbjct: 491 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 670
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 671 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 850
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAK 280
SLRFDGA+NVDVTEFQTNLVPYPRIHFMLSSYAP ISA K
Sbjct: 851 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPDISAEK 970
>TC91984 homologue to GP|16611919|gb|AAL27406.1 alpha-tubulin {Artemia
franciscana}, partial (55%)
Length = 755
Score = 434 bits (1115), Expect = e-122
Identities = 199/251 (79%), Positives = 229/251 (90%)
Frame = +1
Query: 191 THSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINV 250
TH+ LEH+D ++DNE +YDICRR+LDIERPTYTNLNRLI+QV+SS+T SLRFDG++NV
Sbjct: 1 THTTLEHSDCAFMVDNEGVYDICRRNLDIERPTYTNLNRLIAQVVSSITASLRFDGSLNV 180
Query: 251 DVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSNMMAKCDPRHG 310
D+TEF+TNLVPYPRIHF L +YAPVISA KAYHEQ+++ EIT + FEP+N M KCDPRHG
Sbjct: 181 DLTEFRTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVAEITYSCFEPNNQMVKCDPRHG 360
Query: 311 KYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAK 370
KYMACCL+YRGDVVPKDVNAA+A IKTKRT+QFVDWCPTGFK GINYQPPTVVP GDLAK
Sbjct: 361 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAK 540
Query: 371 VQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEK 430
VQRAVCM+SN TA+AE ++R+D+KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEK
Sbjct: 541 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 720
Query: 431 DYEEVGAEGEE 441
DYEEVG + E
Sbjct: 721 DYEEVGTDSLE 753
>TC85408 homologue to PIR|S20869|S20869 tubulin beta-2 chain - garden pea
(fragment), complete
Length = 2121
Score = 395 bits (1016), Expect = e-110
Identities = 187/452 (41%), Positives = 288/452 (63%), Gaps = 3/452 (0%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ I GQ G Q+G WE+ C EHGI P G D+ + + + N +++E G+
Sbjct: 431 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQL--ERINVYYNEASGGR 604
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 605 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 784
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+N LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 785 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 964
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 965 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 1144
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NLVP+PR+HF + +AP+ S + +S+PEIT +++ N
Sbjct: 1145CLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKN 1324
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ ++RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 1325MMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP 1504
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
T ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1505T--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1660
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEEDEEGY 449
A DL + + Y++ AE +E E++EE Y
Sbjct: 1661AESNMNDLVSEYQQYQDATAEEDEYEDEEEDY 1756
>TC85406 SP|P29500|TBB1_PEA Tubulin beta-1 chain. [Garden pea] {Pisum
sativum}, partial (98%)
Length = 1745
Score = 394 bits (1013), Expect = e-110
Identities = 187/455 (41%), Positives = 288/455 (63%), Gaps = 8/455 (1%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MR+++ I GQ G Q+G WE+ C EHGI P G D+ + + + + +++E G+
Sbjct: 116 MRQILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERIDVYYNEASGGR 289
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
VPRA+ +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 290 FVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 469
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 470 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 649
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D V++LDNEA+YDIC R L + P++ +LN LIS +S +T
Sbjct: 650 VVEPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGDLNHLISATMSGVTC 829
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +S+PE+T +++ N
Sbjct: 830 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELTQQMWDAKN 1009
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 1010MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPP 1189
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
T ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1190T--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1345
Query: 421 AR---EDLAALEKDYEEVGAE-----GEEGEEDEE 447
A DL A + Y++ A+ EEGEED E
Sbjct: 1346AESNMNDLVAEYQQYQDATADEDEYGEEEGEEDYE 1450
>TC85405 SP|Q39445|TBB_CICAR Tubulin beta chain. [Chickpea Garbanzo] {Cicer
arietinum}, partial (98%)
Length = 1840
Score = 393 bits (1010), Expect = e-110
Identities = 180/451 (39%), Positives = 287/451 (62%), Gaps = 3/451 (0%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ + GQ G Q+G+ WE+ C EHGI P G S+ + N +++E G+
Sbjct: 230 MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGR 409
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 410 YVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 589
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 590 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 769
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 770 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 949
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 950 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 1129
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K + PP
Sbjct: 1130MMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPP 1309
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
++ + I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1310--------KNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1465
Query: 421 AR---EDLAALEKDYEEVGAEGEEGEEDEEG 448
A DL A + Y++ AE E+ E+EEG
Sbjct: 1466AESNMNDLVAEYQQYQDAIAEEEDDYEEEEG 1558
>TC85410 homologue to PIR|JC2510|JC2510 beta-tubulin R1623 - rice, complete
Length = 2139
Score = 391 bits (1005), Expect = e-109
Identities = 182/449 (40%), Positives = 286/449 (63%), Gaps = 2/449 (0%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ + GQ G Q+G+ WE+ C EHGI P G ++ + + + N +++E G+
Sbjct: 95 MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQL--ERVNVYYNEASCGR 268
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 269 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 448
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 449 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 628
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 629 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 808
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 809 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKN 988
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ M+RG + K+V+ + N++ K + FV+W P K +
Sbjct: 989 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----C 1156
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ P G + A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1157DIAPRG----LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 1324
Query: 421 AREDLAALEKDYEEV--GAEGEEGEEDEE 447
A ++ L +Y++ EEGE D+E
Sbjct: 1325AESNMNDLVSEYQQYQDATADEEGEYDDE 1411
>BG644366 GP|17402471|em alpha-tubulin {Nicotiana tabacum}, partial (47%)
Length = 646
Score = 386 bits (992), Expect = e-108
Identities = 191/205 (93%), Positives = 200/205 (97%)
Frame = +1
Query: 48 AFNTFFSETGSGKHVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGH 107
AFNTFFSETG+GKHVPRA+FVDLEP+VIDEVRTG YRQLFHPEQLISGKEDAANNFARGH
Sbjct: 31 AFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGH 210
Query: 108 YTVGREIVELCLDRTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 167
YT+G+EIV+LCLDR RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL
Sbjct: 211 YTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKL 390
Query: 168 GFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNL 227
GFTIYPSPQVST+VVEPYNSVLSTHSLLEHTDV +LLDNEAIYDICRRSLDIERPTYTNL
Sbjct: 391 GFTIYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYTNL 570
Query: 228 NRLISQVISSLTTSLRFDGAINVDV 252
NRLISQVISSLT SLRFDGA +VDV
Sbjct: 571 NRLISQVISSLTASLRFDGAPDVDV 645
>TC86477 homologue to GP|15408819|dbj|BAB64211. tubulin beta-4 chain {Oryza
sativa (japonica cultivar-group)}, partial (98%)
Length = 1816
Score = 386 bits (991), Expect = e-107
Identities = 179/452 (39%), Positives = 286/452 (62%), Gaps = 5/452 (1%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ I GQ G Q+G WE C EHGI P G ++ + + N +++E +G+
Sbjct: 79 MREILHIQGGQCGNQIGTKFWEAVCDEHGIDPIGQYIGNSKLQ-QLERVNVYYNEGSNGR 255
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NNFA+GHYT G E+++ LD
Sbjct: 256 YVPRAVLMDLEPGTMDAVRSGPYGQIFRPDNFVFGQSGAGNNFAKGHYTEGAELIDFVLD 435
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK +NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 436 VVRKEVENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 615
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 616 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 795
Query: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSN 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +++PE+T +++ N
Sbjct: 796 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSQGSQNYRALTVPELTQQMWDAKN 975
Query: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM DPRHG+Y+ ++RG + K+V+ V N++ K + FV+W P K + PP
Sbjct: 976 MMCAADPRHGRYLTASAVFRGKMSTKEVDEQVMNVQNKNSSYFVEWIPNNVKSSVCDVPP 1155
Query: 361 TVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
+ A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1156--------RGLSMASTFVGNSTSIQEMFRRVSEQFSAMFRRKAFLHWYTGEGMDEMEFTE 1311
Query: 421 AREDLAALEKDYEE-----VGAEGEEGEEDEE 447
A ++ L +Y++ V +G++ +E+E+
Sbjct: 1312AESNMNDLVAEYQQYQDAPVYEDGDDYQEEED 1407
>TC90170 homologue to GP|12963226|gb|AAK11179.1 alpha-tubulin
{Colletotrichum lagenarium}, partial (56%)
Length = 809
Score = 380 bits (976), Expect = e-106
Identities = 172/252 (68%), Positives = 217/252 (85%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MREVISI++GQAG Q+ NSCWELYCLEHGIQPDG + + + F+TFFSETG GK
Sbjct: 51 MREVISINVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKQADPDHGFSTFFSETGQGK 230
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA++ DLEP+V+DEVRTG YR LFHPE +I+GKEDA+NN+ARGHYTVG+E+++ LD
Sbjct: 231 YVPRAIYCDLEPNVVDEVRTGPYRGLFHPEHMITGKEDASNNYARGHYTVGKELIDQVLD 410
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
+ R++ADNC GLQGFLVF++ GGGTGSG G+LL+ERLSVDYGKKSKL F +YP+PQ +T+
Sbjct: 411 KVRRVADNCVGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATS 590
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+L +ERP Y NLNRLI+QV+SS+T
Sbjct: 591 VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITA 770
Query: 241 SLRFDGAINVDV 252
SLRFDG++NVD+
Sbjct: 771 SLRFDGSLNVDL 806
>BG585014 homologue to GP|12850141|db data source:MGD source key:MGI:1095409
evidence:ISS~putative~tubulin alpha 6 {Mus musculus},
partial (57%)
Length = 621
Score = 350 bits (899), Expect = 5e-97
Identities = 161/198 (81%), Positives = 181/198 (91%)
Frame = +2
Query: 249 NVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSNMMAKCDPR 308
NVD+TEFQTNLVPYPRIHF L +YAPVISA KAYHEQ+++ EIT + FEP+N M KCDPR
Sbjct: 8 NVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVAEITYSCFEPNNQMVKCDPR 187
Query: 309 HGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDL 368
HGKYMACCL+YRGDVVPKDVNAA+A IKTKRT+QFVDWCPTGFK GINYQPPTVVP GDL
Sbjct: 188 HGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDL 367
Query: 369 AKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAAL 428
AKVQRAVCM+SN TA+AE ++R+D+KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAAL
Sbjct: 368 AKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAAL 547
Query: 429 EKDYEEVGAEGEEGEEDE 446
EKDYEEVG + E +E+E
Sbjct: 548 EKDYEEVGTDSLENDEEE 601
>TC77912 homologue to GP|10176853|dbj|BAB10059. beta tubulin {Arabidopsis
thaliana}, complete
Length = 1732
Score = 220 bits (560), Expect(2) = 2e-89
Identities = 101/224 (45%), Positives = 150/224 (66%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ I GQ G Q+G WE+ C EHGI G + + + + N +++E G+
Sbjct: 131 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGNNDLQL--ERVNVYYNEASCGR 304
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 305 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 484
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 485 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 664
Query: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTY 224
VVEPYN+ LS H L+E+ D + LDNEA+YDIC R+L + P++
Sbjct: 665 VVEPYNATLSVHQLVENADECMALDNEALYDICFRTLKLTTPSF 796
Score = 127 bits (320), Expect(2) = 2e-89
Identities = 60/188 (31%), Positives = 104/188 (54%)
Frame = +3
Query: 262 YPRIHFMLSSYAPVISAAKAYHEQISIPEITSAVFEPSNMMAKCDPRHGKYMACCLMYRG 321
+P + F+ P + + +++PE+T +++ NMM DPRHG+Y+ M+RG
Sbjct: 909 FPSLAFLHGGICPTHFSWSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG 1088
Query: 322 DVVPKDVNAAVANIKTKRTVQFVDWCPTGFKCGINYQPPTVVPAGDLAKVQRAVCMISNN 381
+ K V+ + N++ K + FV+W P K + PPT ++ A I N+
Sbjct: 1089 KMSTKKVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNS 1244
Query: 382 TAVAEVFSRIDYKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEGEE 441
T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ ++
Sbjct: 1245 TSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY----QD 1412
Query: 442 GEEDEEGY 449
DEEGY
Sbjct: 1413 ATADEEGY 1436
Score = 52.8 bits (125), Expect = 3e-07
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +1
Query: 227 LNRLISQVISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVIS 277
LN LIS +S +T LRF G +N D+ + NL+P+PR HF + +AP+ S
Sbjct: 805 LNHLISATMSGVTCCLRFTGQLNSDLRKLAVNLIPFPRWHFFMVGFAPLTS 957
>TC85409 homologue to PIR|S20869|S20869 tubulin beta-2 chain - garden pea
(fragment), partial (68%)
Length = 1099
Score = 228 bits (582), Expect(2) = 3e-77
Identities = 105/230 (45%), Positives = 156/230 (67%)
Frame = +3
Query: 3 EVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGKHV 62
E++ I GQ G Q+G WE+ C EHGI P G + + + + N +++E G+ V
Sbjct: 174 EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYSGTSELQL--ERINVYYNEASCGRFV 347
Query: 63 PRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLDRT 122
PRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 348 PRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 527
Query: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVV 182
RK A+NC LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS VV
Sbjct: 528 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 707
Query: 183 EPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYTNLNRLIS 232
EPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS
Sbjct: 708 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLIS 857
Score = 78.6 bits (192), Expect(2) = 3e-77
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = +1
Query: 236 SSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQISIPEITSAV 295
S +T LRF G +N D+ + NL+P+PR+HF + +AP+ S + +S+PE+T +
Sbjct: 868 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALSVPELTQQM 1047
Query: 296 FEPSNMMAKCDPRHGKY 312
++ NMM DPRHG+Y
Sbjct: 1048WDSKNMMCAADPRHGRY 1098
>TC76678 homologue to SP|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (34%)
Length = 570
Score = 235 bits (599), Expect(2) = 6e-72
Identities = 116/138 (84%), Positives = 124/138 (89%)
Frame = +2
Query: 26 LEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGKHVPRALFVDLEPSVIDEVRTGEYRQ 85
LEHGI PDG MPSD ++G +DAFNTFFSETG A+FVDLEP+VIDEVRTG YRQ
Sbjct: 176 LEHGIGPDGQMPSDKTIGGGDDAFNTFFSETG-------AVFVDLEPTVIDEVRTGTYRQ 334
Query: 86 LFHPEQLISGKEDAANNFARGHYTVGREIVELCLDRTRKLADNCTGLQGFLVFNAVGGGT 145
LFHPEQLISGKEDAANNFARGHYT+G+EIV+LCLDR RKLADNCTGLQGFLVFNAVGGGT
Sbjct: 335 LFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGT 514
Query: 146 GSGLGSLLLERLSVDYGK 163
GSGLGSLLLERLSVDYGK
Sbjct: 515 GSGLGSLLLERLSVDYGK 568
Score = 54.3 bits (129), Expect(2) = 6e-72
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 1 MREVISIHIGQAGIQVGNSCWELYC 25
MRE IS+HIGQAGIQVGN+CWELYC
Sbjct: 100 MRECISVHIGQAGIQVGNACWELYC 174
>TC84056 homologue to SP|P52273|TBA_BOMMO Tubulin alpha chain. [Silk moth]
{Bombyx mori}, partial (36%)
Length = 545
Score = 234 bits (598), Expect(2) = 7e-65
Identities = 107/148 (72%), Positives = 129/148 (86%), Gaps = 1/148 (0%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D +VG +D+FNTF SETG+GK
Sbjct: 42 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTVGGGDDSFNTFLSETGAGK 221
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
HVPRA+FVDLEP+V+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIV+L LD
Sbjct: 222 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 401
Query: 121 RTR-KLADNCTGLQGFLVFNAVGGGTGS 147
RT + QGFL+F++ GGGTGS
Sbjct: 402 RTSVSSLTSAPVFQGFLIFHSFGGGTGS 485
Score = 31.2 bits (69), Expect(2) = 7e-65
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 148 GLGSLLLERLSVDYGKKS 165
G SLL+ERLSVDYGK+S
Sbjct: 487 GFTSLLMERLSVDYGKES 540
>TC85407 SP|P28551|TBB3_SOYBN Tubulin beta chain (Fragment). [Soybean]
{Glycine max}, partial (54%)
Length = 766
Score = 150 bits (380), Expect(2) = 2e-53
Identities = 69/154 (44%), Positives = 103/154 (66%)
Frame = +2
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ I GQ G Q+G WE+ C EHGI G D+ + + + N +++E G+
Sbjct: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYNGDSELQL--ERINVYYNEASGGR 256
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 257 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 436
Query: 121 RTRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLL 154
RK A+NC LQGF V +++GGGTGSG+G+LL+
Sbjct: 437 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 538
Score = 77.0 bits (188), Expect(2) = 2e-53
Identities = 33/69 (47%), Positives = 50/69 (71%)
Frame = +3
Query: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRR 215
++ +Y + L F+++PSP+VS VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R
Sbjct: 543 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 722
Query: 216 SLDIERPTY 224
+L + PT+
Sbjct: 723 TLKLATPTF 749
>AW689076 homologue to PIR|JA0048|JA0 tubulin beta-1 chain - soybean, partial
(33%)
Length = 468
Score = 133 bits (334), Expect = 2e-31
Identities = 58/144 (40%), Positives = 92/144 (63%)
Frame = +3
Query: 1 MREVISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGISNDAFNTFFSETGSGK 60
MRE++ + GQ G Q+G WE+ C EHGI P G + + + + N +++E G+
Sbjct: 18 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDPSGSYVGKSHLQL--ERVNVYYNEASGGR 191
Query: 61 HVPRALFVDLEPSVIDEVRTGEYRQLFHPEQLISGKEDAANNFARGHYTVGREIVELCLD 120
+VPRA+ +DLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E+++ LD
Sbjct: 192 YVPRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLD 371
Query: 121 RTRKLADNCTGLQGFLVFNAVGGG 144
RK A NC LQGF + +++GGG
Sbjct: 372 VVRKEAXNCDCLQGFQICHSLGGG 443
>CA921757 homologue to SP|Q41784|TBB7 Tubulin beta-7 chain (Beta-7 tubulin).
[Maize] {Zea mays}, partial (34%)
Length = 743
Score = 115 bits (288), Expect = 3e-26
Identities = 58/158 (36%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = -1
Query: 293 SAVFEPSNMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVANIKTKRTVQFVDWCPTGFK 352
SA + NMM DPRHG Y+ M+RG + K+V+ + N++ K + FV+W P K
Sbjct: 725 SADVDSKNMMCAADPRHGPYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVK 546
Query: 353 CGINYQPPTVVPAGDLAKVQRAVCMISNNTAVAEVFSRIDYKFDLMYSKRAFVHWYVGEG 412
+ PP ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEG
Sbjct: 545 SSVCDIPPK--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEG 390
Query: 413 MEEGEFSEAR---EDLAALEKDYEEVGAEGEEGEEDEE 447
M+E EF+EA DL A + Y++ A+ E+ EE+EE
Sbjct: 389 MDEMEFTEAESNMNDLVAEYQQYQDATADEEDYEEEEE 276
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,056,364
Number of Sequences: 36976
Number of extensions: 174872
Number of successful extensions: 905
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of query: 449
length of database: 9,014,727
effective HSP length: 99
effective length of query: 350
effective length of database: 5,354,103
effective search space: 1873936050
effective search space used: 1873936050
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Lotus: description of TM0371b.4