TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0368b.6
         (480 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG585499                                                               70  2e-12
BG585866                                                               62  5e-10
TC83226 weakly similar to PIR|G86419|G86419 probable reverse tra...    52  5e-07
BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At...    52  7e-07
BG586862                                                               39  0.006
TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarot...    37  0.013
TC77959 similar to GP|1621268|emb|CAB02653.1 unknown {Ricinus co...    34  0.14
BG452711                                                               33  0.24
BG646730                                                               30  2.7
BF520135                                                               29  4.6
TC88254 weakly similar to GP|9294409|dbj|BAB02490.1 polygalactur...    29  4.6
AW775710 similar to PIR|T46096|T46 hypothetical protein T25B15.3...    28  6.0
BG645525 homologue to GP|19568098|gb osmotic stress-activated pr...    28  7.8
TC78105 homologue to GP|19568098|gb|AAL89456.1 osmotic stress-ac...    28  7.8
AW267767 weakly similar to GP|20465617|gb| unknown protein {Arab...    28  7.8
TC78104 homologue to GP|19568098|gb|AAL89456.1 osmotic stress-ac...    28  7.8
TC86288 similar to GP|2407790|gb|AAB70660.1| grr1 {Glycine max},...    28  7.8
TC78682 similar to GP|13898655|gb|AAK48848.1 expansin {Prunus ce...    28  7.8

>BG585499 
          Length = 792

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 38/136 (27%), Positives = 63/136 (45%), Gaps = 3/136 (2%)
 Frame = +3

Query: 141 SAYELLT--ENIEDTGPDPMWCLLWRWKGAPCVKMFLWKVLNNGLMVNVKRVHNHLADSD 198
           S+Y LL   ++I D      W +LW W+G    + F+W V +  ++ N +R         
Sbjct: 177 SSYNLLV*DQSIVDCD----WKMLWGWRGPHRTQTFMWLVAHGCILTNYRRSRWGTRVLA 344

Query: 199 LCPLCGTLSESVIHALRDCPMVKPVRLANLPTGGESHFFSM-ELQAWLLRNMRDGLQGWD 257
            CP CG   E+V+H L DC     V +  +P+   ++FFS  + + W+ +N+     G  
Sbjct: 345 TCPCCGNADETVLHVLCDCRPASQVWIRLVPSDWITNFFSFDDCRDWVFKNLSKRSNGVS 524

Query: 258 RDAWTKRFAINVWCLW 273
           +  W   F    W +W
Sbjct: 525 KFKWQPTFMTTCWHMW 572


>BG585866 
          Length = 828

 Score = 62.0 bits (149), Expect = 5e-10
 Identities = 51/212 (24%), Positives = 82/212 (38%), Gaps = 1/212 (0%)
 Frame = +3

Query: 43  GIRWQIGDGKVVRF*QDRWLASGILLAEVAVQPIPPGSLNRVVDEFLGSNGTWETAGFVE 102
           G  W+ G G    F    W + G+L  +     I    L  V D F  + G   T     
Sbjct: 114 GYTWRAGSGNS-SFWYTNWSSLGLLGTQAPFVDIHDLHLT-VKDVF--TTGGQHTQSLYT 281

Query: 103 LMPNIVFQEIMESLPRHLSSAPGLPVWGRTTSGINSTASAYELLTENIEDTG-PDPMWCL 161
           ++P  + + I  +     +S     +W   ++G+ +  S Y  +    E     +  W  
Sbjct: 282 ILPTDIAEVINNTHLNFNASIGDAYIWPHNSNGVYTAKSGYSWILSQTETVNYNNSSWSW 461

Query: 162 LWRWKGAPCVKMFLWKVLNNGLMVNVKRVHNHLADSDLCPLCGTLSESVIHALRDCPMVK 221
           +WR K     K FLW   +N +       H ++ +S +C  CG   ES  H +RDC   K
Sbjct: 462 IWRLKIPEKYKFFLWLACHNAVPTLSLLNHRNMVNSAICSRCGEHEESFFHCVRDCRFSK 641

Query: 222 PVRLANLPTGGESHFFSMELQAWLLRNMRDGL 253
            +    +       F S  +Q WL    +DG+
Sbjct: 642 -IIWHKIGFSSPDFFSSSSVQDWL----KDGI 722


>TC83226 weakly similar to PIR|G86419|G86419 probable reverse transcriptase 
           100033-105622 [imported] - Arabidopsis thaliana, partial
           (2%)
          Length = 885

 Score = 52.0 bits (123), Expect = 5e-07
 Identities = 30/104 (28%), Positives = 46/104 (43%), Gaps = 8/104 (7%)
 Frame = +3

Query: 128 VWGRTTSGINSTASAYELL----TENIEDTGPDP----MWCLLWRWKGAPCVKMFLWKVL 179
           +W    +GI S  S Y  L    T+ I +T        +W  +W     P  K+ LW++L
Sbjct: 3   MWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRIL 182

Query: 180 NNGLMVNVKRVHNHLADSDLCPLCGTLSESVIHALRDCPMVKPV 223
           N+ L V        +    LCP C + +E++ H    CP+ K V
Sbjct: 183 NDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRV 314


>BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
           [imported] - Arabidopsis thaliana, partial (10%)
          Length = 767

 Score = 51.6 bits (122), Expect = 7e-07
 Identities = 27/102 (26%), Positives = 45/102 (43%), Gaps = 9/102 (8%)
 Frame = -3

Query: 129 WGRTTSGINSTASAYELLTE---------NIEDTGPDPMWCLLWRWKGAPCVKMFLWKVL 179
           W  + SG  S  S Y + T           ++    D ++  +W++  +P V+ FLW+ +
Sbjct: 414 WEYSKSGHYSVKSGYYVQTNIIAAANQRGTVDQPSLDDLYQRVWKYNTSPKVRHFLWRCI 235

Query: 180 NNGLMVNVKRVHNHLADSDLCPLCGTLSESVIHALRDCPMVK 221
           +N L         H++    C  CG  SE+V H L  CP  +
Sbjct: 234 SNSLPTAANMRSRHISKDGSCSRCGMESETVNHILFQCPYAR 109


>BG586862 
          Length = 804

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = -1

Query: 162 LWRWKGAPCVKMFLWKVLNNGLMVNVKRVHNHLADSDLCPLCGTLSESVIHALRDCPMVK 221
           +W  K  P  K FLW++L+N L V  +     +  S LCP C +  E+V H   +C + +
Sbjct: 654 VWGIKTIPRHKSFLWRLLHNALPVKDELHKRGIRCSLLCPRCESKIETVQHLFLNCEVTQ 475


>TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarotenoid
           dioxygenase1 {Pisum sativum}, partial (43%)
          Length = 1865

 Score = 37.4 bits (85), Expect = 0.013
 Identities = 31/104 (29%), Positives = 46/104 (43%), Gaps = 8/104 (7%)
 Frame = -2

Query: 128 VWGRTTSGINSTASAYELLTEN--IEDT---GPDPMWCLLWRWKGAPCVKMFLWKVLNNG 182
           VW     G+ S  S Y LL     +ED      + ++  LW+ K    V  F W +  + 
Sbjct: 439 VWKPDKEGVFSVNSCYFLLQNLRLLEDRLSYEEEVIFRELWKSKAPAKVLAFSWTLFLDR 260

Query: 183 L--MVNV-KRVHNHLADSDLCPLCGTLSESVIHALRDCPMVKPV 223
           +  MVN+ KR    + DS  C  CG   E+V+H    C ++  V
Sbjct: 259 IPTMVNLGKRRLLRVEDSKRCVFCGCQDETVVHLFLHCDVISKV 128


>TC77959 similar to GP|1621268|emb|CAB02653.1 unknown {Ricinus communis},
           partial (87%)
          Length = 1224

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
 Frame = +1

Query: 35  NTWESFSCGIRWQIGDGKVV--RF*QDRWLASGILLAEVAVQPIPPGSLNRVVDEFLGSN 92
           N WESF+CG R    +G++V      +   A G L+  VA++ + P    R     L  N
Sbjct: 481 NGWESFACGFRADYPEGEIVIHNSGVEDDPACGPLIDSVALKVLNPPIRTRA---NLLKN 651

Query: 93  GTWETAGFVELMPNIVFQEIMESLPRHLSSAPG-LPVW 129
           G +E   +V   PN  +  +   +P H+  A G LP W
Sbjct: 652 GNFEEGPYV--FPNASWGVL---IPPHIEDAHGPLPGW 750


>BG452711 
          Length = 672

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 13/31 (41%), Positives = 19/31 (60%)
 Frame = +3

Query: 193 HLADSDLCPLCGTLSESVIHALRDCPMVKPV 223
           +L  S+LCP+C   S+ ++HAL  C   K V
Sbjct: 387 NLISSNLCPICNQRSQDMLHALFSCTRAKDV 479


>BG646730 
          Length = 799

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 13/36 (36%), Positives = 18/36 (49%)
 Frame = +1

Query: 27  SSIWNGVRNTWESFSCGIRWQIGDGKVVRF*QDRWL 62
           S  W  + N  +    G RW I +G+ VR  +D WL
Sbjct: 400 SYAWRSMFNIKDVIDLGSRWSISNGQNVRIWKDDWL 507


>BF520135 
          Length = 202

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 21/68 (30%), Positives = 33/68 (47%), Gaps = 6/68 (8%)
 Frame = +3

Query: 159 WCLL-WRWKGAPCVKMFLWKVLNNGL--MVNVKR---VHNHLADSDLCPLCGTLSESVIH 212
           WCLL WR +    V +F W++ +  L    NV +   VH+   D+ +C     L ES +H
Sbjct: 3   WCLLLWRKEDLSKVSIFAWRLFHGRLPTKANVFKRGIVHH---DAHMCVTRCRLIESDVH 173

Query: 213 ALRDCPMV 220
               C ++
Sbjct: 174 LFLHCDVL 197


>TC88254 weakly similar to GP|9294409|dbj|BAB02490.1 polygalacturonase
          inhibitor-like protein {Arabidopsis thaliana}, partial
          (54%)
          Length = 706

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 11/38 (28%), Positives = 23/38 (59%), Gaps = 1/38 (2%)
 Frame = +3

Query: 10 YGCG-NNVMSIVSHRASESSIWNGVRNTWESFSCGIRW 46
          +GC  ++  +++S +AS    ++G+ NTW   +C + W
Sbjct: 60 HGCSPSDRTALLSFKASLKEPYHGIFNTWSGENCCVNW 173


>AW775710 similar to PIR|T46096|T46 hypothetical protein T25B15.30 -
           Arabidopsis thaliana, partial (29%)
          Length = 492

 Score = 28.5 bits (62), Expect = 6.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 346 LDRRLLSSSGYFKPLTCGAMGNSHG 370
           L R ++SSS Y   + CGA G+ HG
Sbjct: 341 LFRAIMSSSSYKTSMVCGASGSFHG 267


>BG645525 homologue to GP|19568098|gb osmotic stress-activated protein kinase
           {Nicotiana tabacum}, partial (63%)
          Length = 811

 Score = 28.1 bits (61), Expect = 7.8
 Identities = 11/30 (36%), Positives = 19/30 (62%)
 Frame = +3

Query: 253 LQGWDRDAWTKRFAINVWCLWRMM*YSIMC 282
           LQG   D++T  ++  V C WR +* +++C
Sbjct: 312 LQGGGFDSYTSWYSYGVCCWWRAL*PNLLC 401


>TC78105 homologue to GP|19568098|gb|AAL89456.1 osmotic stress-activated
           protein kinase {Nicotiana tabacum}, partial (35%)
          Length = 731

 Score = 28.1 bits (61), Expect = 7.8
 Identities = 11/30 (36%), Positives = 19/30 (62%)
 Frame = +3

Query: 253 LQGWDRDAWTKRFAINVWCLWRMM*YSIMC 282
           LQG   D++T  ++  V C WR +* +++C
Sbjct: 498 LQGGGFDSYTSWYSYGVCCWWRAL*PNLLC 587


>AW267767 weakly similar to GP|20465617|gb| unknown protein {Arabidopsis
           thaliana}, partial (5%)
          Length = 737

 Score = 28.1 bits (61), Expect = 7.8
 Identities = 18/53 (33%), Positives = 27/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 258 RDAWTK--RFAINVWCLWRMM*YSIMCSGIVLRYNAGLCRASMMMVWLPLMLS 308
           + AW    R + N++ LWR M  S +CS I++       RA M+    P +LS
Sbjct: 131 KGAWDSCFRLSTNIYLLWRRMLKSTICS*III-IEIPFLRARMVERTTPSLLS 286


>TC78104 homologue to GP|19568098|gb|AAL89456.1 osmotic stress-activated
           protein kinase {Nicotiana tabacum}, partial (95%)
          Length = 1434

 Score = 28.1 bits (61), Expect = 7.8
 Identities = 11/30 (36%), Positives = 19/30 (62%)
 Frame = +2

Query: 253 LQGWDRDAWTKRFAINVWCLWRMM*YSIMC 282
           LQG   D++T  ++  V C WR +* +++C
Sbjct: 338 LQGGGFDSYTSWYSYGVCCWWRAL*PNLLC 427


>TC86288 similar to GP|2407790|gb|AAB70660.1| grr1 {Glycine max}, partial
           (84%)
          Length = 2900

 Score = 28.1 bits (61), Expect = 7.8
 Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +1

Query: 167 GAPCVKMF-LWKV--LNNGLMVNVKRVHNHLADSDLCPLCGTLSESVIHALRDCPMVKPV 223
           G P +K F LW V  +++  ++ +    + + + DLC L     +++I   + CP +  +
Sbjct: 742 GCPSLKSFTLWDVATISDAGLIEIANGCHQIENLDLCKLPTISDKALIAVAKHCPNLTEL 921

Query: 224 RLANLPTGG 232
            + + P+ G
Sbjct: 922 SIESCPSIG 948


>TC78682 similar to GP|13898655|gb|AAK48848.1 expansin {Prunus cerasus},
           partial (91%)
          Length = 1236

 Score = 28.1 bits (61), Expect = 7.8
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +3

Query: 159 WCLLWRWKGAPCVKMFLW 176
           WCLLW W  A C   FLW
Sbjct: 168 WCLLW-WSMARCSCYFLW 218


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.334    0.143    0.505 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,727,557
Number of Sequences: 36976
Number of extensions: 302815
Number of successful extensions: 2394
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2391
length of query: 480
length of database: 9,014,727
effective HSP length: 100
effective length of query: 380
effective length of database: 5,317,127
effective search space: 2020508260
effective search space used: 2020508260
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 60 (27.7 bits)