BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0359.4
(742 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk p... 45 8e-05
TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean... 44 2e-04
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ... 44 2e-04
TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot... 42 9e-04
TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF719... 40 0.002
TC81882 similar to GP|9759349|dbj|BAB10004.1 contains similarity... 40 0.002
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar... 40 0.003
TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 40 0.003
TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroele... 40 0.004
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 39 0.007
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 39 0.007
TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [... 39 0.007
TC91221 similar to GP|21553718|gb|AAM62811.1 unknown {Arabidopsi... 39 0.009
TC88788 weakly similar to SP|P05790|FBOH_BOMMO Fibroin heavy cha... 38 0.012
BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophi... 38 0.012
TC88229 similar to PIR|E84471|E84471 probable beta-1 3-glucanase... 38 0.016
TC83458 homologue to PIR|T07796|T07796 DNA-directed RNA polymera... 38 0.016
AW689097 weakly similar to PIR|T47565|T47 hypothetical protein F... 37 0.021
TC85985 similar to GP|5139695|dbj|BAA81686.1 expressed in cucumb... 37 0.021
TC93063 similar to PIR|T08852|T08852 lustrin A - California red ... 37 0.028
>TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk protein
{Argiope trifasciata}, partial (3%)
Length = 1177
Score = 45.4 bits (106), Expect = 8e-05
Identities = 42/152 (27%), Positives = 54/152 (34%), Gaps = 21/152 (13%)
Frame = +3
Query: 302 SSNPLTPIPE---SQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQ-------------- 344
S PL P P P SPP RS SP PLW
Sbjct: 153 SKTPLPPPPPPLPQHPKPPQKSPPRMRRSKPSPSSPAATPLWPQRTTPPPSPSTPRPSP* 332
Query: 345 NPTSRSEDPTSLLTIPYDPLSSEPIVQDQPEPNQTEPQPR----TSDPSAPRASERPAAR 400
P + S PT+ L P + P + +P T P P+ + P++P A++R R
Sbjct: 333 TPATPSTSPTAPLPTPPPRTTLPPALTPRPPSPSTPPTPKPGPVSVSPASPSATQRVPWR 512
Query: 401 TTDTDSSTAFTPVSFPINVIDSPPSNTSESIR 432
T SST + P PS S S R
Sbjct: 513 PTARASSTKVPAAAKP*RRATRRPSAVSRSSR 608
Score = 37.0 bits (84), Expect = 0.028
Identities = 44/191 (23%), Positives = 68/191 (35%), Gaps = 1/191 (0%)
Frame = +3
Query: 303 SNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYD 362
+ P +P P + + ++P SP +P P L Q+P + P +
Sbjct: 69 TRPSSPTPSAPRTSSRSTPSTSPSRRPRSKTPLPPPPPPLPQHPKPPQKSPPRMRRSKPS 248
Query: 363 PLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDS 422
P S P PQ RT+ P +P ++ RP+ T T S++ P+ P
Sbjct: 249 PSS--------PAATPLWPQ-RTTPPPSP-STPRPSP*TPATPSTSPTAPLPTPPPRTTL 398
Query: 423 PPSNTSESIRKFMEIRKEKVSALEEYYLTCPSPRRYPGPRPERL-VDPDEPIQPDPEPAQ 481
PP+ T PSP P P+P + V P P P +
Sbjct: 399 PPALTPRP----------------------PSPSTPPTPKPGPVSVSPASPSATQRVPWR 512
Query: 482 SVSNQSSVRSP 492
+ SS + P
Sbjct: 513 PTARASSTKVP 545
Score = 35.4 bits (80), Expect = 0.080
Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 3/150 (2%)
Frame = +3
Query: 365 SSEPIVQDQPEPNQTEP-QPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDSP 423
S+ P + T P +P + PSAPR S R T+ + + TP+ P +
Sbjct: 18 STSPSYASRTPLRSTPPTRPSSPTPSAPRTSSRSTPSTSPSRRPRSKTPLPPPPPPLPQH 197
Query: 424 PSNTSESIRKFMEIRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPIQPDPEP--AQ 481
P +S + +R+ K S PS P+R P P P P P
Sbjct: 198 PKPPQKSPPR---MRRSKPS---------PSSPAATPLWPQRTTPPPSPSTPRPSP*TPA 341
Query: 482 SVSNQSSVRSPHPLVETSDPHLGTSDPNAP 511
+ S + P P T+ P T P +P
Sbjct: 342 TPSTSPTAPLPTPPPRTTLPPALTPRPPSP 431
Score = 30.8 bits (68), Expect = 2.0
Identities = 45/176 (25%), Positives = 58/176 (32%), Gaps = 5/176 (2%)
Frame = +3
Query: 180 FVSRLP---PAPEFPSPPKRKAQRKMVLDESSEESDVPLVKKTKRKPDDGDDSESEDGPP 236
+ SR P P PS P A R S KT P PP
Sbjct: 33 YASRTPLRSTPPTRPSSPTPSAPRTSSRSTPSTSPSRRPRSKTPLPPPP-PPLPQHPKPP 209
Query: 237 KKKQKKKVRIVVKPTRVEPAAAVV--RRTEPPARVTRSSAHSSKPALASDDDLNLFDALP 294
+K + R KP+ PAA + +RT PP + PA S P
Sbjct: 210 QKSPPRMRRS--KPSPSSPAATPLWPQRTTPPPSPSTPRPSP*TPATPSTSPTAPLPTPP 383
Query: 295 ISALLQHSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRS 350
L + P P P + P + SP S PS T+ W PT+R+
Sbjct: 384 PRTTLPPALTPRPPSPSTPPTPKPGPVSVSPAS----PSATQRVPW----RPTARA 527
>TC85251 homologue to PIR|JQ2128|JQ2128 metallothionein - soybean, partial
(93%)
Length = 1554
Score = 44.3 bits (103), Expect = 2e-04
Identities = 44/189 (23%), Positives = 62/189 (32%), Gaps = 17/189 (8%)
Frame = -2
Query: 255 PAAAVVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLTPIPESQP 314
P A T+PP V S P + + P A P P+S P
Sbjct: 812 PTAITPVTTQPPTVVASPPITSQPPVTVAPKSAPVTSPAPKIAPASSPKVPPPQPPKSSP 633
Query: 315 AAQTTSPPHSPRSSFFQPSPTEAP------LWNLLQNPTSRSEDPTSL-LTIPYDPLSSE 367
+ T PP P P+P + P + P + PT T P P +
Sbjct: 632 VSTPTLPPPLPPPPKISPTPVQTPPAPAPVKATPVPAPAPAKQAPTPAPATSPPIPAPTP 453
Query: 368 PIVQDQPEPNQTEPQPRTSDPSAPRAS----------ERPAARTTDTDSSTAFTPVSFPI 417
I P P ++P+ R P R + P A TDT + + P P
Sbjct: 452 AIEAPVPAPESSKPKRRRHRPKHRRHQAPAPAPTVIHKSPPAPPTDTTADSDTAPAPAPS 273
Query: 418 NVIDSPPSN 426
++ PSN
Sbjct: 272 FNLNGAPSN 246
Score = 36.6 bits (83), Expect = 0.036
Identities = 47/197 (23%), Positives = 69/197 (34%), Gaps = 16/197 (8%)
Frame = -2
Query: 250 PTRVEPAA--AVVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALPISALLQHSSNPLT 307
PT++ P A+ T P V S +S+P + + S P+T
Sbjct: 836 PTKLPPTTPTAITPVTTQPPTVVASPPITSQPPVT----------------VAPKSAPVT 705
Query: 308 -PIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYD-PLS 365
P P+ PA+ PP P S +PT P P PT + T P P+
Sbjct: 704 SPAPKIAPASSPKVPPPQPPKSSPVSTPTLPP-----PLPPPPKISPTPVQTPPAPAPVK 540
Query: 366 SEPIVQDQPEPNQTEPQPRTSDP------------SAPRASERPAARTTDTDSSTAFTPV 413
+ P+ P P P TS P AP +S +P R P
Sbjct: 539 ATPVPAPAPAKQAPTPAPATSPPIPAPTPAIEAPVPAPESS-KPKRRRHRPKHRRHQAPA 363
Query: 414 SFPINVIDSPPSNTSES 430
P + SPP+ +++
Sbjct: 362 PAPTVIHKSPPAPPTDT 312
Score = 28.9 bits (63), Expect = 7.5
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 23/140 (16%)
Frame = -2
Query: 408 TAFTPVSF-PINVIDSPPSNTSESIRKFMEIRKEKVSALEEYYLTCPSPR-------RYP 459
TA TPV+ P V+ SPP + + A + +T P+P+ + P
Sbjct: 809 TAITPVTTQPPTVVASPPITSQPPV----------TVAPKSAPVTSPAPKIAPASSPKVP 660
Query: 460 GPRPERLVDPDEPIQPDP--------------EPAQSVSNQSSVRSPHPLVETSDPHLGT 505
P+P + P P P PA + + V +P P + P T
Sbjct: 659 PPQPPKSSPVSTPTLPPPLPPPPKISPTPVQTPPAPAPVKATPVPAPAPAKQAPTPAPAT 480
Query: 506 SDP-NAPMINIGSPQGASEA 524
S P AP I +P A E+
Sbjct: 479 SPPIPAPTPAIEAPVPAPES 420
>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
partial (97%)
Length = 1049
Score = 44.3 bits (103), Expect = 2e-04
Identities = 34/128 (26%), Positives = 50/128 (38%), Gaps = 10/128 (7%)
Frame = +3
Query: 310 PESQPAAQT---TSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSS 366
P S PA T +PP +P++S P P ++ + +P P + P SS
Sbjct: 255 PNSSPAPPTPPANTPPTTPQAS---PPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSS 425
Query: 367 EPIVQDQPEPN-------QTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINV 419
P VQ P P Q+ P P + P++P P A A P +
Sbjct: 426 PPPVQQSPPPTPLTPPPVQSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALTPTP 605
Query: 420 IDSPPSNT 427
+ SPP+ T
Sbjct: 606 LSSPPATT 629
Score = 38.9 bits (89), Expect = 0.007
Identities = 49/186 (26%), Positives = 65/186 (34%), Gaps = 11/186 (5%)
Frame = +3
Query: 235 PPKKKQKKKVRIVVKPTRVEPAAAVVRRTEPPARVTRSSAHSSKPALASDDDLNLFDALP 294
PP Q + P V+ + ++ + PPA+ T SS P +
Sbjct: 297 PPTTPQASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPPV------------- 437
Query: 295 ISALLQHSSNPLTPIPESQPAAQTTSPPHSPRSSF---FQPSPTEAPLWNLLQNPTSRSE 351
S P TP+ + P Q+T PP SP + F P P P T
Sbjct: 438 ------QQSPPPTPL--TPPPVQSTPPPASPPPASPPPFSPPPATPP------PATPPPA 575
Query: 352 DPTSLLTIPYDPLSSEPIVQDQPEPNQTE-------PQPRTSDPSAPRASE-RPAARTTD 403
P LT PLSS P P P + + P SD AP S P+ +
Sbjct: 576 TPPPALT--PTPLSSPPATTPAPAPAKLKSKAPALAPVLSPSDAPAPGLSSLSPSISPSG 749
Query: 404 TDSSTA 409
TD S A
Sbjct: 750 TDDSGA 767
>TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
{Homo sapiens}, partial (11%)
Length = 591
Score = 42.0 bits (97), Expect = 9e-04
Identities = 51/186 (27%), Positives = 75/186 (39%), Gaps = 2/186 (1%)
Frame = +2
Query: 237 KKKQKKKVRIVVKPTRVEPAAAVVRRTE--PPARVTRSSAHSSKPALASDDDLNLFDALP 294
+ Q+K R R PA+A + + P R S + SS+P S P
Sbjct: 104 RNSQQKWSRTS*SSERATPASASLTSSSSIPSQRSRTSRSPSSRPRHTSTG------TAP 265
Query: 295 ISALLQHSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPT 354
A+ +S+P TP ++ + +TS P +P +SF P P ++ ++ P+
Sbjct: 266 PFAVSSPASSPTTP-SSTRSSPGSTSTPRTPSTSFSARPPPSTPPPTPFRSRPTKGSSPS 442
Query: 355 SLLTIPYDPLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVS 414
S P SS P P T P S PSAP + RP + TA +P S
Sbjct: 443 ST------PSSSSP-------PAPTSPAISPSRPSAP--TRRP------SPPGTACSPRS 559
Query: 415 FPINVI 420
P N I
Sbjct: 560 RPPNSI 577
>TC83962 similar to PIR|B86289|B86289 hypothetical protein AAF71991.1
[imported] - Arabidopsis thaliana, partial (11%)
Length = 679
Score = 40.4 bits (93), Expect = 0.002
Identities = 45/131 (34%), Positives = 59/131 (44%), Gaps = 17/131 (12%)
Frame = +2
Query: 303 SNPLTPIPESQPAAQTTS---PPHSPRSSFFQPSPTEAPLWNLLQNPTSRSE-------- 351
SN TP P S + T+S PP +P +S PSP P L +PT S
Sbjct: 71 SNSSTPSPSSSTSTSTSSSSSPPPTPSTSSTTPSP---PPPTSLSSPTPTSNHLSSA*PT 241
Query: 352 DPTSLLT-IPYDPLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTT-----DTD 405
PT+ LT +P PL+S P N PQ +TS PS P S P+ +TT
Sbjct: 242 TPTNTLTAVPSTPLNS-------PCSNLHLPQ-QTSLPS-PLPSSSPSYQTTPPALASVS 394
Query: 406 SSTAFTPVSFP 416
S++ TP+ P
Sbjct: 395 LSSSATPLPLP 427
>TC81882 similar to GP|9759349|dbj|BAB10004.1 contains similarity to unknown
protein~gb|AAF72944.1~gene_id:MAH20.11 {Arabidopsis
thaliana}, partial (5%)
Length = 875
Score = 40.4 bits (93), Expect = 0.002
Identities = 25/76 (32%), Positives = 35/76 (45%)
Frame = +3
Query: 308 PIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSE 367
P P PA P +P ++ PS P NL +NP + S PT+ T P++ +
Sbjct: 111 PCPPPNPAISAAEPTQTPTTTLLPPSLPNPPPLNL-KNPPNFSVSPTTKST----PIT-K 272
Query: 368 PIVQDQPEPNQTEPQP 383
P+V P P T P P
Sbjct: 273 PLVHAPPNPTTTAPNP 320
>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
thaliana}, partial (3%)
Length = 805
Score = 40.0 bits (92), Expect = 0.003
Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Frame = +3
Query: 292 ALPISALLQHSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSE 351
+LP S N + P P TSP SP +S + T P +P S +
Sbjct: 12 SLPPGVAQTPSGNGIAPSPYQ--FNNPTSPSSSPSASSPVSTTTSPPASTPASSPVSTTT 185
Query: 352 DPTSLLTIPYDPLSSE-PIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAF 410
P + P SS P P P T+ P+A A PAA T S+TA
Sbjct: 186 SPPAST-----PASSPVPTTTSPPAPTPASSPVSTNSPTASPAGSLPAAATPSPSSTTAG 350
Query: 411 TP 412
+P
Sbjct: 351 SP 356
>TC91646 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (15%)
Length = 984
Score = 40.0 bits (92), Expect = 0.003
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +1
Query: 296 SALLQHSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTS 355
S L++ S +P P S + P +P S PSPT +P P RS P
Sbjct: 232 SPLMEAPSPRPSPSPLSPLRFPSRLPLTTPPSLTTSPSPTASPPPRSPPRPPPRSP-PRQ 408
Query: 356 LLTIPYD-PLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAA 399
L++ P P S P ++ PE ++T P PR +P + PAA
Sbjct: 409 LMSPPRPLPRSPSPPPRNPPELSRTTPTPRPPMSPSPSPTSPPAA 543
Score = 32.7 bits (73), Expect = 0.52
Identities = 22/83 (26%), Positives = 35/83 (41%), Gaps = 3/83 (3%)
Frame = +3
Query: 335 TEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIVQDQPEPNQTEPQPRTSDPSAPRAS 394
TE P + P + +++PT T + EP +PN T S P S
Sbjct: 363 TEEPTETATEEPATTTDEPTETSTEEPITSTEEPTGTVTDDPNTTASDESFSFTDVPTGS 542
Query: 395 ER---PAARTTDTDSSTAFTPVS 414
+ P+A TT T+++T V+
Sbjct: 543 DSTSVPSATTTGTETATPSATVA 611
Score = 31.6 bits (70), Expect = 1.2
Identities = 31/110 (28%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Frame = +1
Query: 324 SPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIVQDQPEPNQ----- 378
SP P P+ +PL L P SL T P S P +P P
Sbjct: 232 SPLMEAPSPRPSPSPLSPLRFPSRLPLTTPPSLTTSPSPTASPPPRSPPRPPPRSPPRQL 411
Query: 379 -TEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDSPPSNT 427
+ P+P PS P + +RTT T P P SPP+ T
Sbjct: 412 MSPPRPLPRSPSPPPRNPPELSRTTPTP-----RPPMSPSPSPTSPPAAT 546
>TC78703 homologue to GP|13129456|gb|AAK13114.1 Putative retroelement pol
polyprotein {Oryza sativa} [Oryza sativa (japonica
cultivar-group)], partial (2%)
Length = 1235
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/81 (35%), Positives = 39/81 (47%), Gaps = 8/81 (9%)
Frame = +3
Query: 296 SALLQHSSNPLTPIPESQPAAQTTSPPHSP--RSSFFQPSP------TEAPLWNLLQNPT 347
S L HSS+ LTPIP P +++PP SP SF PSP T P+ + +P
Sbjct: 534 SPLSSHSSDALTPIPPPSPLNGSSTPP-SPVLDGSFPPPSPLDGSTLTPPPVQQVGSSPP 710
Query: 348 SRSEDPTSLLTIPYDPLSSEP 368
D T+ +T P+S P
Sbjct: 711 PLGTDVTNPITPTQSPVSEPP 773
Score = 33.5 bits (75), Expect = 0.30
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = +3
Query: 317 QTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSS-----EPIVQ 371
QTTSPP PSP+ AP + L + +S + P P PL+ P++
Sbjct: 486 QTTSPP--------SPSPSVAPSPSPLSSHSSDALTPIP----PPSPLNGSSTPPSPVLD 629
Query: 372 DQ-PEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDSPPSNTSES 430
P P+ + T P S P TD + TP P++ + PP N + S
Sbjct: 630 GSFPPPSPLDGSTLTPPPVQQVGSSPP---PLGTDVTNPITPTQSPVS--EPPPPNAASS 794
Query: 431 I 431
I
Sbjct: 795 I 797
Score = 31.2 bits (69), Expect = 1.5
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = +3
Query: 384 RTSDPSAPRASERPAARTTDTDSSTAFTPVS--FPINVIDSPPSNTSESIRKFMEIRKEK 441
+T+ P +P S P+ + SS A TP+ P+N +PPS ++
Sbjct: 486 QTTSPPSPSPSVAPSPSPLSSHSSDALTPIPPPSPLNGSSTPPS-------PVLDGSFPP 644
Query: 442 VSALEEYYLTCPSPRRYPGPRPERLVDPDEPIQPDPEP 479
S L+ LT P ++ P D PI P P
Sbjct: 645 PSPLDGSTLTPPPVQQVGSSPPPLGTDVTNPITPTQSP 758
>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
Length = 1338
Score = 38.9 bits (89), Expect = 0.007
Identities = 70/264 (26%), Positives = 98/264 (36%), Gaps = 14/264 (5%)
Frame = -1
Query: 300 QHSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTS----RSEDPTS 355
+H+S P P P A+ P PRS+ P + L + P + S P S
Sbjct: 1257 RHTSG*FRPRP---PPARA---PRLPRST--HPCSVVSSLVVVRSTPHTLAPISSASPPS 1102
Query: 356 LLTIPYDPLSSEPIVQDQPEPNQTE-PQPRTSDPSAPRASER------PAARTTDTDSST 408
PY PL+S + P + + P PR P PRA+ P A T + T
Sbjct: 1101 PRHRPYPPLTSPHTARYSPSLSLSHYPAPRPV-PRPPRAAVSILHLPLPTATTHTRHTHT 925
Query: 409 AFTPVSFPINVIDSPPSNTSESIRKFMEIRKEKVSALEEYYLTCPSPRRYPGPRPERLVD 468
+P S P++++ P+ T+ + + R P+PR YP P R
Sbjct: 924 PLSPRSAPLHLL--APTFTTNT-PPLIATRPRSTDITPTLRGQPPTPRPYPQPLRTRAHV 754
Query: 469 PDEPIQPDPEPAQSVSNQSSVRSPHPLVETSDPHLGTSDPNAPMINIGSPQ---GASEAH 525
P D A V S R PH V S H P ++ + P G A
Sbjct: 753 GAYPRLRDAAHAVLVKAHRSPRPPH--VGPSLAHPARPRPGRVLLVMQYPTSFLGTGSAP 580
Query: 526 SSNHLASPEPNLSIIPYTHLQPTS 549
+ H P P S P T +PTS
Sbjct: 579 PAIH-HHPNPPASQSPATLNRPTS 511
Score = 38.5 bits (88), Expect = 0.009
Identities = 31/107 (28%), Positives = 40/107 (36%)
Frame = -3
Query: 294 PISALLQHSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDP 353
P ++ + PL P+ +S P PPHSP S PS +P P S P
Sbjct: 376 PAASAVPLPLRPLYPLRDSPPRRPPPPPPHSP--SILPPSSRLSP-----PTPLPLSSSP 218
Query: 354 TSLLTIPYDPLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAAR 400
L +P P P P P P T+ AP A P +R
Sbjct: 217 *PALPLPLPP----------PTPPPPPPAPTTTPI*APAAGYTPESR 107
Score = 32.0 bits (71), Expect = 0.89
Identities = 46/205 (22%), Positives = 67/205 (32%), Gaps = 12/205 (5%)
Frame = -1
Query: 250 PTRVEPAAAVVRRTEPPARVTRSSA------HSSKPALASDDDLNLFDALPISALLQHSS 303
P R P ++ P + + SA H + PA S LN S
Sbjct: 657 PARPRPGRVLLVMQYPTSFLGTGSAPPAIHHHPNPPASQSPATLNR----------PTSH 508
Query: 304 NPLTPIPES---QPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLT-- 358
P P P P A + SPP P P P L P + P++L T
Sbjct: 507 TPACPPPSRPPPHPRAPSLSPPPPPHPPTSPPRPGRPRSSTLAPPPHRQFHSPSALCTHC 328
Query: 359 -IPYDPLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPI 417
IP + P P P + P S P P P + + + S P+ P
Sbjct: 327 GIPPPAVPPPP----PPTPPPSSPPALVSPPPRPFLFPPPPNQPSPSPSPPPPPPLPPP- 163
Query: 418 NVIDSPPSNTSESIRKFMEIRKEKV 442
PP + + + + + K K+
Sbjct: 162 --PPQPPQSRHQRLGIHLRVDKNKM 94
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 38.9 bits (89), Expect = 0.007
Identities = 53/238 (22%), Positives = 81/238 (33%), Gaps = 7/238 (2%)
Frame = +3
Query: 303 SNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYD 362
S+P P + P ++PP S ++ P P+ P P++ S P S T P
Sbjct: 27 SSPPPSTPANPPPVTPSAPPPSTPATPSSPPPSTTP---SAPPPSTPSNSPPSPPTTP-- 191
Query: 363 PLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDS 422
+S P P P PS P + P + S + T + + +
Sbjct: 192 AISPPSGGGTTPSPPSRTPPSSDDSPSPPSSKTPPPPSPPSSSSISTGTVIGIAVGAV-- 365
Query: 423 PPSNTSESIRKFMEI------RKEKVSALEEYYLTCPSPRRYPGPRPERLVDP-DEPIQP 475
+ F I +K++ EEYY + P RP+ V+P P Q
Sbjct: 366 -------VVLVFFSICCICFRKKKRRRRDEEYYGQQNYQQPPPAQRPK--VEPYGGPPQQ 518
Query: 476 DPEPAQSVSNQSSVRSPHPLVETSDPHLGTSDPNAPMINIGSPQGASEAHSSNHLASP 533
A S+ + P P P + P P I S G+ +S L P
Sbjct: 519 WQNNAHPPSDHVVSKPPPPAPIPPRPPSHVAPPPPPPAFISSSGGSGSNYSGGELLPP 692
Score = 30.0 bits (66), Expect = 3.4
Identities = 29/120 (24%), Positives = 37/120 (30%)
Frame = +3
Query: 365 SSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDSPP 424
SS P P T P PSAP S + ++ + P S P N SPP
Sbjct: 3 SSPPPATPSSPPPSTPANPPPVTPSAPPPSTPATPSSPPPSTTPSAPPPSTPSNSPPSPP 182
Query: 425 SNTSESIRKFMEIRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPIQPDPEPAQSVS 484
+ + +S T P R P + P P P P S S
Sbjct: 183 TTPA-------------ISPPSGGGTTPSPPSRTPPSSDDSPSPPSSKTPPPPSPPSSSS 323
>TC81252 similar to PIR|T52624|T52624 b-Zip DNA binding protein [imported] -
Arabidopsis thaliana, partial (48%)
Length = 1221
Score = 38.9 bits (89), Expect = 0.007
Identities = 29/92 (31%), Positives = 39/92 (41%)
Frame = +3
Query: 305 PLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPL 364
P+ +P S AA +T+ P P PSP L + P S + PT+L T PL
Sbjct: 78 PMHRLPTSSSAAASTASPPPP------PSPANPTLTTVAPTPKSTTVSPTTLWT---SPL 230
Query: 365 SSEPIVQDQPEPNQTEPQPRTSDPSAPRASER 396
D P P T P+T S+P + R
Sbjct: 231 PIP*PAADPPPPASTRSDPKTIS-SSPTLTSR 323
>TC91221 similar to GP|21553718|gb|AAM62811.1 unknown {Arabidopsis
thaliana}, partial (31%)
Length = 917
Score = 38.5 bits (88), Expect = 0.009
Identities = 41/129 (31%), Positives = 59/129 (44%), Gaps = 4/129 (3%)
Frame = +2
Query: 302 SSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSP-TEAPLWNLLQNPTSRSEDPTSLLTIP 360
S+ P T P P Q PP P SS PSP + + W+ +PT S P +P
Sbjct: 338 STTPSTQPPTHSPPPQLPPPPPPPPSSNHPPSPLSSSSPWHPF-SPT--SHPPEHHPPLP 508
Query: 361 YDPLSSEPIVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFT--PVSF-PI 417
++ ++ Q P T P P S PS P S P+ + T S FT P F P+
Sbjct: 509 TTATNTSVVIATQTPP--TTP*P-PSVPSQPNTS-GPSKLHSVTLSGVLFTASPTPFSPL 676
Query: 418 NVIDSPPSN 426
++I+S P++
Sbjct: 677 SLINSNPTS 703
>TC88788 weakly similar to SP|P05790|FBOH_BOMMO Fibroin heavy chain
precursor (Fib-H) (H-fibroin). [Silk moth] {Bombyx
mori}, partial (2%)
Length = 782
Score = 38.1 bits (87), Expect = 0.012
Identities = 28/101 (27%), Positives = 37/101 (35%), Gaps = 1/101 (0%)
Frame = -2
Query: 305 PLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPL 364
P P P +PA + S P + P P P W P DP DP
Sbjct: 424 PEDPDPA*EPAYEPASEPAPDPA----PDPARDPAWEPASEPAPEDPDP--------DP- 284
Query: 365 SSEPIVQDQPEPN-QTEPQPRTSDPSAPRASERPAARTTDT 404
+P V+ +P+P P P + P P S +PA T
Sbjct: 283 --DPEVEAEPDPEPDPAPAPEPAPPPPPSPSPKPAPNPIPT 167
>BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophila
melanogaster}, partial (2%)
Length = 734
Score = 38.1 bits (87), Expect = 0.012
Identities = 48/233 (20%), Positives = 79/233 (33%), Gaps = 4/233 (1%)
Frame = +1
Query: 308 PIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPT-SRSEDPTSLLTIPYDPLSS 366
P E+ T+ P + + + T N L T S +E PT T + ++
Sbjct: 25 PEKETTTTESETNTPTKSETDVPETTTTIEKSKNDLGTTTESETETPTKSETNVPETTTT 204
Query: 367 EPIVQDQPEPNQTEPQPR--TSDPSAPRASERPAART-TDTDSSTAFTPVSFPINVIDSP 423
EPIVQ E TE + T+ + P A T T T S T + + +
Sbjct: 205 EPIVQTDSEETPTEKPEKETTTKTTKPEAETTTEPETNTPTKSETDVPETTTTLEKNQNV 384
Query: 424 PSNTSESIRKFMEIRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPIQPDPEPAQSV 483
P +T+ES + + + + EE P E + D +
Sbjct: 385 PGSTTESETETPTKSETETTTTEE--------------------TPTEKPETDIPKTTTA 504
Query: 484 SNQSSVRSPHPLVETSDPHLGTSDPNAPMINIGSPQGASEAHSSNHLASPEPN 536
S ++ + P V T T P + ++ + N +PE N
Sbjct: 505 SEKNKTTTTEPTVPTVSEETPTEKPEKETTTTPETEATTQPETDNTPTNPEKN 663
>TC88229 similar to PIR|E84471|E84471 probable beta-1 3-glucanase [imported]
- Arabidopsis thaliana, partial (69%)
Length = 1368
Score = 37.7 bits (86), Expect = 0.016
Identities = 40/136 (29%), Positives = 54/136 (39%), Gaps = 9/136 (6%)
Frame = +2
Query: 301 HSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDPTSLLTIP 360
H P+ + A QTT P HS SSF N ++ S S PT L + P
Sbjct: 83 HYLQMAVPLE*TMVA*QTTYPQHSK*SSF----------*NHKESTGSNSTTPTRLFSNP 232
Query: 361 Y-DPLSSEP--------IVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFT 411
Y DP S P Q + P + +TS + P+ +P+ T + SST T
Sbjct: 233 YPDPESK*P*TSQTNNSFTQPENSPTPSHGSKKTSSFTTPKPKSKPSPSATKS-SSTHTT 409
Query: 412 PVSFPINVIDSPPSNT 427
P + SPP T
Sbjct: 410 PPN-----TSSPP*KT 442
>TC83458 homologue to PIR|T07796|T07796 DNA-directed RNA polymerase (EC
2.7.7.6) largest chain - soybean (fragment), partial
(63%)
Length = 1220
Score = 37.7 bits (86), Expect = 0.016
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +2
Query: 312 SQPAAQTTSPPHSPRSSFFQP-SPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEPIV 370
+ P TSP +SP S + P SPT +P + +PTS + PTS P P S
Sbjct: 881 TSPGYSPTSPGYSPTSPGYSPTSPTYSPS-SPGYSPTSPAYSPTSPSYSPTSPSYSPTSP 1057
Query: 371 QDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDSP 423
P P + P++P S +A + + + + +P P + SP
Sbjct: 1058SYSPTSPSYSPTSSSYSPTSPAYSPTSSAYSPTSPAYSPTSPSYSPTSPFYSP 1216
Score = 37.0 bits (84), Expect = 0.028
Identities = 32/117 (27%), Positives = 47/117 (39%), Gaps = 1/117 (0%)
Frame = +2
Query: 310 PESQPAAQTTSPPHSPRSSFFQP-SPTEAPLWNLLQNPTSRSEDPTSLLTIPYDPLSSEP 368
P S P +SP +SP S + P SP +P + +PTS PTS P P S
Sbjct: 812 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPT-SPGYSPTSPGYSPTSPTYSPSSPGYSPT 988
Query: 369 IVQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSSTAFTPVSFPINVIDSPPS 425
P P + P++P S + + + S + +P P + SP S
Sbjct: 989 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSSYSPTSPAYSPTSSAYSPTS 1159
Score = 33.5 bits (75), Expect = 0.30
Identities = 24/67 (35%), Positives = 34/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 302 SSNPLTP-IPESQPAAQTTSPPHSPRSSFFQP-SPTEAPLWNLLQNPTSRSEDPTSLLTI 359
S +P +P + P+ TSP +SP SS + P SP +P + +PTS + PTS
Sbjct: 1016 SYSPTSPSYSPTSPSYSPTSPSYSPTSSSYSPTSPAYSPT-SSAYSPTSPAYSPTSPSYS 1192
Query: 360 PYDPLSS 366
P P S
Sbjct: 1193 PTSPFYS 1213
>AW689097 weakly similar to PIR|T47565|T47 hypothetical protein F24B22.20 -
Arabidopsis thaliana, partial (24%)
Length = 582
Score = 37.4 bits (85), Expect = 0.021
Identities = 18/39 (46%), Positives = 25/39 (63%), Gaps = 1/39 (2%)
Frame = -2
Query: 525 HSSNHLASPEPNLSIIPY-THLQPTSLSECINIFYHEAS 562
H ++H + EP S++PY L PTSLS NI+ H+AS
Sbjct: 317 HXAHHSRTSEPGSSLVPYKPFLDPTSLSAPSNIYTHQAS 201
>TC85985 similar to GP|5139695|dbj|BAA81686.1 expressed in cucumber
hypocotyls {Cucumis sativus}, partial (42%)
Length = 892
Score = 37.4 bits (85), Expect = 0.021
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = +3
Query: 294 PISALLQHSSNPLTPIPESQPAAQTTSPPHSPRSSFFQPSPTEAPLWNLLQNPTSRSEDP 353
P +A + + P +P P + P +++ P SP ++ P+ + A + ++P + S
Sbjct: 168 PSAAPVAAPTKPKSPAPVASP--KSSPPASSPTAATVTPAVSPAAPVPVAKSPAASSPVV 341
Query: 354 TSLLTIPYD-PLSSEPI---VQDQPEPNQTEPQPRTSDPSAPRASERPAARTTDTDSST 408
+ T P P+SS P V P P P S P+ ++E PAA + + T
Sbjct: 342 APVSTPPKPAPVSSPPAPVPVSSPPTPVPVSSPPTASTPAVTPSAEVPAAAPSKSKKKT 518
>TC93063 similar to PIR|T08852|T08852 lustrin A - California red abalone,
partial (4%)
Length = 1058
Score = 37.0 bits (84), Expect = 0.028
Identities = 39/167 (23%), Positives = 64/167 (37%), Gaps = 6/167 (3%)
Frame = -1
Query: 367 EPIVQDQPEPNQTEPQPRTS-DPSA---PRASERPAARTTDTDSSTAFTPVSFPINVIDS 422
EP + +PEP + EP+P +P A P A P A D P I ID
Sbjct: 629 EPEPEPEPEP-EAEPEPEAEPEPEAEPEPEAEPEPEAEPEPEDEEEEQEPDD--IETIDY 459
Query: 423 PPSNTSESIRKFMEIRKEKVSALEEYYLTCPSPRRYPGPRPERLVDPDEPIQPDPEPAQS 482
+ ++ + +A ++Y+ + PS YP P + PDP
Sbjct: 458 TSNMPVSNM-----LTPAVETANQDYFNSAPSDLTYPQPSAHDIAMSAVGSYPDPAATVD 294
Query: 483 VSNQSSVRSPH--PLVETSDPHLGTSDPNAPMINIGSPQGASEAHSS 527
S+Q +V + + P + + + G + N + GAS S+
Sbjct: 293 YSDQHAVTTSYGQPALTETGSYQGAVNTNYSQQAVMDTNGASLGQSA 153
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.128 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,656,525
Number of Sequences: 36976
Number of extensions: 357941
Number of successful extensions: 3333
Number of sequences better than 10.0: 229
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3191
length of query: 742
length of database: 9,014,727
effective HSP length: 103
effective length of query: 639
effective length of database: 5,206,199
effective search space: 3326761161
effective search space used: 3326761161
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Lotus: description of TM0359.4