BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0358.5
(189 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81323 similar to GP|11762174|gb|AAG40365.1 At1g17620 {Arabidop... 50 5e-07
AW690364 weakly similar to GP|9759067|dbj contains similarity to... 48 2e-06
AW686891 weakly similar to GP|10177234|db gb|AAF18257.1~gene_id:... 47 6e-06
BF646828 similar to GP|19911581|db syringolide-induced protein B... 42 1e-04
TC82735 weakly similar to GP|6686408|gb|AAF23842.1| F1E22.7 {Ara... 40 5e-04
TC81293 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 39 0.002
TC77727 weakly similar to GP|6041819|gb|AAF02134.1| unknown prot... 38 0.003
TC76929 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 37 0.004
TC76930 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 37 0.004
TC87566 weakly similar to GP|21554256|gb|AAM63331.1 unknown {Ara... 34 0.030
TC85112 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 34 0.030
TC89445 similar to GP|7417006|gb|AAF62403.1| harpin inducing pro... 33 0.051
TC89826 weakly similar to PIR|T49138|T49138 hypothetical protein... 30 0.43
TC78084 weakly similar to GP|13877665|gb|AAK43910.1 Unknown prot... 30 0.56
TC77475 similar to GP|6041819|gb|AAF02134.1| unknown protein {Ar... 30 0.73
TC83853 weakly similar to GP|13877665|gb|AAK43910.1 Unknown prot... 29 1.2
TC93369 29 1.2
TC83802 similar to GP|7417006|gb|AAF62403.1| harpin inducing pro... 28 2.1
BG648713 similar to GP|16924108|gb putative nucleotide-binding p... 27 4.7
BF636459 27 6.2
>TC81323 similar to GP|11762174|gb|AAG40365.1 At1g17620 {Arabidopsis
thaliana}, partial (7%)
Length = 1014
Score = 50.1 bits (118), Expect = 5e-07
Identities = 37/145 (25%), Positives = 67/145 (45%)
Frame = +1
Query: 9 VFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIFYSLEIENPNKDSSI 68
+F++ +G G +V L+ P+ PS++V L + + +L NPN+ +
Sbjct: 268 IFVLILLGVAGTVVYFLY---HPQRPSFTVTSLKLT-----SSEFDLTLSTTNPNEKITF 423
Query: 69 YYDDIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARHGAFKPLFKAISNATAE 128
Y I +S L G+ + VG+ I SF GT T + V K++ + E
Sbjct: 424 SYQPISVSLLAGELD--VGDGVIPSFEHGTKNTTMLKALVER---------KSVKRKSLE 570
Query: 129 LKVALTTRFQYKTWGIKSKFHGLHL 153
LK+ + T+ + K W K+ G+++
Sbjct: 571 LKMKMETKVEAKMWVFKTPHVGINV 645
>AW690364 weakly similar to GP|9759067|dbj contains similarity to
harpin-induced protein~gene_id:MGN6.8 {Arabidopsis
thaliana}, partial (48%)
Length = 684
Score = 48.1 bits (113), Expect = 2e-06
Identities = 34/98 (34%), Positives = 51/98 (51%), Gaps = 4/98 (4%)
Frame = +3
Query: 5 KRFYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQ----HPGENGSIFYSLEIE 60
K F+ F F L LL+L ++ L+P P +S+ L I Q P N SI +L +
Sbjct: 87 KIFFAFSTFFTTIL-LLILLIYFILKPSKPQFSLQELDIYQLNLSGPILNSSIQLTLLSK 263
Query: 61 NPNKDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQGT 98
NPN+ SIYYD+ + Y Q+ ++ + F+QGT
Sbjct: 264 NPNQKVSIYYDEFQVYATYKNQQ-ITSDSFVPPFYQGT 374
>AW686891 weakly similar to GP|10177234|db
gb|AAF18257.1~gene_id:MRN17.10~similar to unknown
protein {Arabidopsis thaliana}, partial (64%)
Length = 482
Score = 46.6 bits (109), Expect = 6e-06
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Frame = +3
Query: 9 VFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIFY-----SLEIENPN 63
+ ++ I +GL VL WL +RPK+ YSV SI + + Y ++ +NPN
Sbjct: 96 IIILALIIIVGLAVLISWLVVRPKNLQYSVEDASIHNFNLTDANHLYANFDFTIRSKNPN 275
Query: 64 KDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQG-----------TGKTRSVYDTV 108
S+YYD I +S Y ++ + + F Q T +T ++YD+V
Sbjct: 276 SKVSLYYDSIEVSVRY--EDQTLATNAVQPFFQPHKNVTRMHARLTAQTVALYDSV 437
>BF646828 similar to GP|19911581|db syringolide-induced protein B13-1-9
{Glycine max}, partial (60%)
Length = 648
Score = 42.0 bits (97), Expect = 1e-04
Identities = 26/96 (27%), Positives = 48/96 (49%), Gaps = 6/96 (6%)
Frame = +1
Query: 7 FYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIFYSLEIE----NP 62
F+ ++ I GL++L +L ++P++ + V + Q N +++Y++ + NP
Sbjct: 151 FWKLIIALIVLFGLIILIFFLIVQPRAFKFYVTKAELTQFDHTNNTLYYNMVLNFTSHNP 330
Query: 63 NKDSSIYYDDI-ILSFLYGQQEDKVGETT-IGSFHQ 96
NK IYYD + +F G + V T + SF Q
Sbjct: 331 NKKLGIYYDKVEAQAFYEGSRFSNVDVITHMNSFRQ 438
>TC82735 weakly similar to GP|6686408|gb|AAF23842.1| F1E22.7 {Arabidopsis
thaliana}, partial (74%)
Length = 965
Score = 40.0 bits (92), Expect = 5e-04
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Frame = +1
Query: 8 YVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQ-HPGENGSIFYSLEI----ENP 62
+ L+ I +G+ V L+LA RPK YSV L I Q + ++ S+F + + NP
Sbjct: 265 FTILLILIIAIGITVGALYLAFRPKLTKYSVDRLRITQFNLSDDNSLFVTFNVTVTARNP 444
Query: 63 NKDSSIYY-DDIILSFLYGQQEDKVGETTIGSFHQGTGKT 101
NK IYY +S Y +E + E ++ F+QG T
Sbjct: 445 NKKIGIYYVSGSHISAWY--KETGLCEGSLPKFYQGHRNT 558
>TC81293 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (60%)
Length = 799
Score = 38.5 bits (88), Expect = 0.002
Identities = 21/69 (30%), Positives = 38/69 (54%), Gaps = 6/69 (8%)
Frame = +1
Query: 11 LMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQ--HPGENGSIFYSLEIE----NPNK 64
L+ I GL++L WL ++P++ +SV + + + + ++ Y+L + NPNK
Sbjct: 121 LLAIIVLAGLIILIFWLVVQPRTFKFSVKEAKLTKFNYSDDTNTLHYNLVLNFTARNPNK 300
Query: 65 DSSIYYDDI 73
+IYYD I
Sbjct: 301 KLNIYYDVI 327
>TC77727 weakly similar to GP|6041819|gb|AAF02134.1| unknown protein
{Arabidopsis thaliana}, partial (93%)
Length = 1078
Score = 37.7 bits (86), Expect = 0.003
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 5 KRFYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIFYS-----LEI 59
+R + +M F+ + L +L +W LRP P++ ++ +++ + S L
Sbjct: 225 QRIFWAIMVFLFLVLLTILLIWAILRPTKPTFILLDVTLYAFNASQPNFLTSNFQVTLSS 404
Query: 60 ENPNKDSSIYYDDIILSFLYGQQEDKVGETTIGSFHQG 97
NPN + +YYD + Y Q+ + T I +QG
Sbjct: 405 RNPNDNIGVYYDRLDTYMTYRSQQITL-RTAIPPSYQG 515
>TC76929 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (79%)
Length = 767
Score = 37.4 bits (85), Expect = 0.004
Identities = 20/71 (28%), Positives = 37/71 (51%), Gaps = 4/71 (5%)
Frame = +2
Query: 7 FYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIFYSLEIE----NP 62
F+ L+ I GL VL +L ++P+ + V ++ + N ++ Y++ + NP
Sbjct: 233 FWKLLIALIVLAGLAVLIFYLVVQPRGFKFYVDEANLTEFDYSNNTLNYNMVLNFTARNP 412
Query: 63 NKDSSIYYDDI 73
NK +IYYD +
Sbjct: 413 NKKLNIYYDKV 445
>TC76930 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (87%)
Length = 996
Score = 37.4 bits (85), Expect = 0.004
Identities = 20/71 (28%), Positives = 37/71 (51%), Gaps = 4/71 (5%)
Frame = +2
Query: 7 FYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIFYSLEIE----NP 62
F+ L+ I GL VL +L ++P+ + V ++ + N ++ Y++ + NP
Sbjct: 257 FWKLLIALIVLAGLAVLIFYLVVQPRGFKFYVDEANLTEFDYSNNTLNYNMVLNFTARNP 436
Query: 63 NKDSSIYYDDI 73
NK +IYYD +
Sbjct: 437 NKKLNIYYDKV 469
>TC87566 weakly similar to GP|21554256|gb|AAM63331.1 unknown {Arabidopsis
thaliana}, partial (44%)
Length = 1042
Score = 34.3 bits (77), Expect = 0.030
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +3
Query: 8 YVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQHPGENG---SIFYSLEI--ENP 62
+ L+ I LG+ + L+L RPK P YSV L + Q N ++ ++L I NP
Sbjct: 339 FSILIILIIALGITIGILFLVFRPKIPKYSVDELRVTQFDLSNNNSLAVTFNLTITARNP 518
Query: 63 NKDSSI-YYDDIILSFLYGQQEDKVGETTIGSFHQG 97
NK I Y +S Y + K+ E ++ F+QG
Sbjct: 519 NKKIGIDYRGGSRISAWY--IDTKLCEGSLPKFYQG 620
>TC85112 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (27%)
Length = 597
Score = 34.3 bits (77), Expect = 0.030
Identities = 20/78 (25%), Positives = 40/78 (50%), Gaps = 6/78 (7%)
Frame = +1
Query: 8 YVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQH--PGENGSIFYSLEI----EN 61
++ L+ I + L++L +++ + P+S + V + Q N ++ Y+L + +N
Sbjct: 136 WIILVTIIILVSLIILVIYIIITPRSFKFHVNQAKLTQFNFTNNNTTLNYNLVLNFTAQN 315
Query: 62 PNKDSSIYYDDIILSFLY 79
PNK IYYD + + Y
Sbjct: 316 PNKKLKIYYDVVEANAFY 369
>TC89445 similar to GP|7417006|gb|AAF62403.1| harpin inducing protein
{Nicotiana tabacum}, partial (36%)
Length = 651
Score = 33.5 bits (75), Expect = 0.051
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +1
Query: 20 LLVLCLWLALRPKSPSYSVVFLSIEQHP-GENGSIFYSLE----IENPNKDSSIYYDDII 74
+L WL +RP ++V ++ Q E ++ Y L + NPN+ IYYD I
Sbjct: 268 ILGFIFWLIVRPNVVKFTVNDATLTQFNFNETNTLHYDLALNVTVRNPNRRVGIYYDTIE 447
Query: 75 LSFLYGQQEDKVGETTIGSFHQ 96
Y ++ + T+G F Q
Sbjct: 448 TMAFY--KDVQFANQTLGRFFQ 507
>TC89826 weakly similar to PIR|T49138|T49138 hypothetical protein T10D17.10
- Arabidopsis thaliana, partial (59%)
Length = 1130
Score = 30.4 bits (67), Expect = 0.43
Identities = 25/95 (26%), Positives = 38/95 (39%), Gaps = 17/95 (17%)
Frame = +2
Query: 5 KRFYVFLMEFIGFLGLLVLCLWLALRPKSPSY----SVVFLSIEQHPGENGS-------- 52
+R + ++ FI + ++ +W+ LRP P + + VF GE S
Sbjct: 134 RRIFAAILSFIILILFVIFLIWIILRPTKPRFILQDATVFAFNLSSTGETPSSTTPTPNT 313
Query: 53 ----IFYSLEIENPNKDSSIYYDDIILSFLY-GQQ 82
I +L NPN IYY + Y GQQ
Sbjct: 314 ITLTIQVTLSSFNPNSKIGIYYHKLDAYASYRGQQ 418
>TC78084 weakly similar to GP|13877665|gb|AAK43910.1 Unknown protein
{Arabidopsis thaliana}, partial (46%)
Length = 832
Score = 30.0 bits (66), Expect = 0.56
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Frame = +1
Query: 14 FIGFLGLLVLCL-------WLALRPKSPSYSVVFLSIEQHPGENGSIF-----YSLEIEN 61
FIG L L++ + +L +RP++P Y++ +S++ + S S++ +N
Sbjct: 214 FIGILFTLIVLMAIAAGVFYLIVRPEAPKYAIDRVSVKGMNLTSLSTISPEFDVSVKADN 393
Query: 62 PNKDSSIYYD-DIILSFLYGQQEDKVGETTIGSFHQGTGKTRSVYDTVNARHG--AFKPL 118
NK IYY+ D + Y + + + + +F+Q + +V+ TV +G +
Sbjct: 394 GNKKIGIYYESDSSVEMFY--RGVSLCKGVLPAFYQPSNNV-TVFQTVLKGNGIELVRSD 564
Query: 119 FKAISNATAELKVALTTRFQ----------YKTWGIKSK 147
+A+ NA + V LT + + KTW ++ K
Sbjct: 565 QRALVNAVTKGSVPLTLKLRAPVKIKVGSVKKTWKVRVK 681
>TC77475 similar to GP|6041819|gb|AAF02134.1| unknown protein {Arabidopsis
thaliana}, partial (83%)
Length = 1128
Score = 29.6 bits (65), Expect = 0.73
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 8/87 (9%)
Frame = +3
Query: 5 KRFYVFLMEFIGFLGLL---VLCLWLALRPKSPSYSVVFLSIEQHPGE-----NGSIFYS 56
KRF I FL ++ +L +W L+P PS+ + +++ + +
Sbjct: 210 KRFRKIFWGIIIFLFIVLVTILIIWAVLKPSKPSFILQDVTVYAFNATVPNFLTSNFQVT 389
Query: 57 LEIENPNKDSSIYYDDIILSFLYGQQE 83
+ NPN IYYD + Y Q+
Sbjct: 390 VSSRNPNDKIGIYYDRLDSYVTYRSQQ 470
>TC83853 weakly similar to GP|13877665|gb|AAK43910.1 Unknown protein
{Arabidopsis thaliana}, partial (49%)
Length = 815
Score = 28.9 bits (63), Expect = 1.2
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Frame = +1
Query: 7 FYVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSI--------EQHPGENGSIFYSLE 58
F + I LG+ +L RPK+P+Y++ ++I G + +++
Sbjct: 280 FIGIIFILIALLGIAAGIFYLVFRPKAPNYTIENITIRGINITSPSSTTGISPEFDVTVK 459
Query: 59 IENPN--------KDSS--IYYDDIIL 75
+NPN KDSS I+Y D+ L
Sbjct: 460 ADNPNDKIGISYEKDSSAEIFYKDMRL 540
>TC93369
Length = 548
Score = 28.9 bits (63), Expect = 1.2
Identities = 14/39 (35%), Positives = 20/39 (50%)
Frame = +3
Query: 151 LHLQGILPIDSDGKLSRKKKKYPLSRSSRKLARSIAKRH 189
LH++ I+ + D + RKKKK R S K R + H
Sbjct: 366 LHIKSIVKVTCD*YIKRKKKKVAQQRDSGKFVRLKEEEH 482
>TC83802 similar to GP|7417006|gb|AAF62403.1| harpin inducing protein
{Nicotiana tabacum}, partial (19%)
Length = 435
Score = 28.1 bits (61), Expect = 2.1
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +2
Query: 8 YVFLMEFIGFLGLLVLCLWLALRPKSPSYSVVFLSIEQ--HPGENGSIFYSL----EIEN 61
+ ++ I +G+ V WL +RP + V ++ Q + N ++ Y+L I N
Sbjct: 233 FKLILTVIIIIGIAVFLFWLIVRPNAVKVHVTDATLTQFNYTNNNSNLNYNLALNITIRN 412
Query: 62 PNK 64
PN+
Sbjct: 413 PNR 421
>BG648713 similar to GP|16924108|gb putative nucleotide-binding protein
{Oryza sativa}, partial (69%)
Length = 754
Score = 26.9 bits (58), Expect = 4.7
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +1
Query: 123 SNATAELKVALTTRFQYKTWGIKSKFHGLHLQGILPIDSDGKLSRKKKKYPL 174
S L VAL ++FQ K + + +G ++ ++ ID+ ++++ K P+
Sbjct: 196 STTAVNLAVALASKFQLKVGLLDADVYGPNIPIMMNIDTKPEVTQDNKMIPI 351
>BF636459
Length = 519
Score = 26.6 bits (57), Expect = 6.2
Identities = 11/35 (31%), Positives = 21/35 (59%)
Frame = +1
Query: 21 LVLCLWLALRPKSPSYSVVFLSIEQHPGENGSIFY 55
L+LCL+++++ + S + L + HP E G +Y
Sbjct: 61 LMLCLFMSIKTLAQSENEKILDTKGHPLERGKEYY 165
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.320 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,943,805
Number of Sequences: 36976
Number of extensions: 79930
Number of successful extensions: 460
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of query: 189
length of database: 9,014,727
effective HSP length: 91
effective length of query: 98
effective length of database: 5,649,911
effective search space: 553691278
effective search space used: 553691278
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Lotus: description of TM0358.5