TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0344.11
         (579 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78683 similar to GP|14194147|gb|AAK56268.1 AT4g17486/AT4g17486...    30  2.0
TC81524 similar to GP|10177085|dbj|BAB10391. dipeptidyl peptidas...    30  3.3
TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreu...    29  5.7
TC78858 similar to PIR|T51392|T51392 probable phytochelatin synt...    28  7.4
TC89957 weakly similar to PIR|D96810|D96810 hypothetical protein...    28  9.7

>TC78683 similar to GP|14194147|gb|AAK56268.1 AT4g17486/AT4g17486
           {Arabidopsis thaliana}, partial (74%)
          Length = 1134

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/79 (25%), Positives = 40/79 (50%)
 Frame = +2

Query: 455 LQETIRIAAARKIKVDALIQTLKEEAGQEGEHAADAEREGSAENDEEHSSSSVCSFVKTR 514
           L E++++ A R  + D L+ + +EE+  +    +D   E  +++   +S +   SF+K R
Sbjct: 671 LPESLQVEAVRH-EPDHLVHSDEEESESDSHSESDDSEEEGSKHHLLNSHNGDVSFIKER 847

Query: 515 PVQEIFYVQVFKCYKLASV 533
           P+     V+ F C  L  +
Sbjct: 848 PMD----VE*FSCVALVVI 892


>TC81524 similar to GP|10177085|dbj|BAB10391. dipeptidyl peptidase IV-like
           protein {Arabidopsis thaliana}, partial (24%)
          Length = 1259

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 22/82 (26%), Positives = 34/82 (40%), Gaps = 4/82 (4%)
 Frame = +2

Query: 184 LAAYIFHPDNIQTETIF----KIGNISATVNDFDCLNPERVVEPEWDVRMGRKIEEIMDT 239
           L +Y+F PDN     IF    K        +  D    E  + PE  +R  R  E  +  
Sbjct: 287 LISYLFSPDNTLNRKIFTFDLKTNKQELLFSPPDGGLDESNISPEEKLRRERLRERGLGV 466

Query: 240 YSNDWLHPYAQLKYIYVPINAG 261
              +W+   ++ K + VP+ AG
Sbjct: 467 TRYEWVKTNSKRKAVLVPLPAG 532


>TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreurys
           tristis}, partial (8%)
          Length = 4117

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 28/111 (25%), Positives = 40/111 (35%), Gaps = 9/111 (8%)
 Frame = -1

Query: 417 DPHVLDIDLPSSRTSVPASMSASGTHSVIAELEAISKELQETIRIAAARKIKVDALIQTL 476
           +P   D    SSR    A  +         ++E ISK + E +R   A K + D      
Sbjct: 802 EPEASDAVQVSSREQNEAKTATIEAGETETKVEEISKAVNEPVRETLASKFEKD------ 641

Query: 477 KEEAGQEG---------EHAADAEREGSAENDEEHSSSSVCSFVKTRPVQE 518
           +EE  Q G         E     E E + END    S  +      +P Q+
Sbjct: 640 EEETIQNGVDNLEKERIEEPVKTEVESTKENDTTTISKDLPKETPAKPAQK 488


>TC78858 similar to PIR|T51392|T51392 probable phytochelatin synthetase -
            Arabidopsis thaliana, partial (94%)
          Length = 1602

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/27 (40%), Positives = 20/27 (73%)
 Frame = -1

Query: 348  MEWLSMGSSFHQNAKTKLNERASRMKI 374
            +++L++ +S HQ A +K NER S +K+
Sbjct: 1425 LKYLTLYASIHQTASSKNNERMSALKV 1345


>TC89957 weakly similar to PIR|D96810|D96810 hypothetical protein T11I11.6
            [imported] - Arabidopsis thaliana, partial (51%)
          Length = 1843

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
 Frame = +3

Query: 13   DEAILVQNEAMTTKLEDFDTTLKEIATKVDELDLAQGCTSKANI-----HTDSPKWR--L 65
            +  +L    A  +KL  ++  +++     D   +   C SKA +     +    +W   +
Sbjct: 1404 NSVLLCNRAACRSKLGQYEKAIEDC----DAALMLNPCYSKARLRRAYCNAKLERWEVAI 1571

Query: 66   DDYNIFVIDSSDDEDVPRTATHLQKQVKTEVLERQHELITPQGKSFLQFEQNKVFGSGKD 125
             DY + + +   DE+V R     + Q+K         ++  +    L+F  N VF S  D
Sbjct: 1572 QDYEMLIREKPGDEEVARALFEARLQLK---------MLRGEDIKDLKFGSNLVFISSND 1724

Query: 126  SYQ 128
             ++
Sbjct: 1725 RFR 1733


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,778,769
Number of Sequences: 36976
Number of extensions: 255474
Number of successful extensions: 1359
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of query: 579
length of database: 9,014,727
effective HSP length: 101
effective length of query: 478
effective length of database: 5,280,151
effective search space: 2523912178
effective search space used: 2523912178
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)