
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TM0336.3
(230 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC87039 similar to GP|7269704|emb|CAB79652.1 predicted protein {... 337 3e-93
TC92490 similar to GP|7269704|emb|CAB79652.1 predicted protein {... 317 2e-87
TC91762 homologue to PIR|T13434|T13434 hypothetical protein T17A... 275 8e-75
TC82629 similar to GP|7269704|emb|CAB79652.1 predicted protein {... 275 1e-74
CB893164 weakly similar to GP|6016718|gb| hypothetical protein {... 201 2e-52
CA917030 similar to GP|18461166|dbj contains ESTs AU090550(E2560... 163 4e-41
BF634786 similar to GP|7269704|emb| predicted protein {Arabidops... 91 5e-19
AW329169 similar to PIR|E84636|E84 NAM (no apical meristem)-like... 71 4e-13
TC79441 similar to GP|9757865|dbj|BAB08499.1 NAM (no apical meri... 71 4e-13
TC86725 similar to GP|9758909|dbj|BAB09485.1 NAM (no apical meri... 70 9e-13
TC79575 similar to GP|7715611|gb|AAF68129.1| F20B17.1 {Arabidops... 61 3e-10
TC90118 homologue to GP|15795116|dbj|BAB02380. jasmonic acid reg... 60 5e-10
TC77792 similar to GP|1418990|emb|CAA99760.1 unknown {Lycopersic... 60 5e-10
TC78189 homologue to GP|14485513|emb|CAC42087. putative NAC doma... 60 9e-10
BG646875 similar to GP|21593065|gb NAM / CUC2-like protein {Arab... 59 2e-09
TC77156 homologue to GP|13877717|gb|AAK43936.1 OsNAC6 protein-li... 58 3e-09
TC80936 similar to GP|15795116|dbj|BAB02380. jasmonic acid regul... 57 5e-09
TC80069 similar to GP|15148914|gb|AAK84884.1 NAC domain protein ... 56 1e-08
TC87447 homologue to GP|15148912|gb|AAK84883.1 NAC domain protei... 55 2e-08
TC88609 similar to GP|15148914|gb|AAK84884.1 NAC domain protein ... 55 3e-08
>TC87039 similar to GP|7269704|emb|CAB79652.1 predicted protein {Arabidopsis
thaliana}, partial (57%)
Length = 1150
Score = 337 bits (863), Expect = 3e-93
Identities = 163/235 (69%), Positives = 190/235 (80%), Gaps = 6/235 (2%)
Frame = +1
Query: 1 MKWCNDSDKEKGNKYLITPTNTPKAIINLTEGI---HTIKCPSCSHNTDVRDQGGIH--- 54
M WCND D + +T I L E I TI+CPSC HN +V++QGG++
Sbjct: 52 MAWCNDKDNNNSD---VTDN------IKLNEEIDQNQTIECPSCGHNIEVKNQGGVNELP 204
Query: 55 GLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
GLPAGVKFDP+D EILEHLEAKV+S+V KLHPLID+FIPT+QG+NGICYTHP +LPGVSK
Sbjct: 205 GLPAGVKFDPSDVEILEHLEAKVMSNVSKLHPLIDEFIPTIQGENGICYTHPAQLPGVSK 384
Query: 115 DGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
DGQ+RHFFHRPSKAYTTGTRKRRKVHTD+EG ETRWHKTGKTRA+F+ G VKGFKKI+V
Sbjct: 385 DGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGIETRWHKTGKTRAIFS-NGVVKGFKKILV 561
Query: 175 LYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQTQPRQCGTSIIRD 229
LYTN+ + KPEKTNWVMHQYHLG NEEE+DGE V SK+FYQTQPRQ G++ I +
Sbjct: 562 LYTNYCKDGKPEKTNWVMHQYHLGMNEEERDGEFVASKIFYQTQPRQHGSNSINN 726
>TC92490 similar to GP|7269704|emb|CAB79652.1 predicted protein {Arabidopsis
thaliana}, partial (57%)
Length = 1236
Score = 317 bits (813), Expect = 2e-87
Identities = 148/183 (80%), Positives = 165/183 (89%), Gaps = 3/183 (1%)
Frame = +2
Query: 33 IHTIKCPSCSHNTDVRDQGGIH---GLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLID 89
+ T+ CPSC HN + +DQGGI+ GLPAGVKFDPNDQEIL+HLEAKV+ DV KLHPLID
Sbjct: 2 VRTLTCPSCGHNIEFQDQGGINELPGLPAGVKFDPNDQEILQHLEAKVLFDVPKLHPLID 181
Query: 90 QFIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETR 149
+FIPTL+G+NGICYTHPEKLPGV KDGQ+RHFFHRPSKAYTTGTRKRRKV TD+EGSETR
Sbjct: 182 EFIPTLEGENGICYTHPEKLPGVKKDGQIRHFFHRPSKAYTTGTRKRRKVQTDEEGSETR 361
Query: 150 WHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELV 209
WHKTGKTR V G +KGFKKI+VLYTN+GRQ+KPEKTNWVMHQYHLGSNEEE+DGELV
Sbjct: 362 WHKTGKTRPVII-DGVMKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELV 538
Query: 210 VSK 212
VSK
Sbjct: 539 VSK 547
>TC91762 homologue to PIR|T13434|T13434 hypothetical protein T17A13.50 -
Arabidopsis thaliana, partial (40%)
Length = 1002
Score = 275 bits (704), Expect = 8e-75
Identities = 134/195 (68%), Positives = 155/195 (78%), Gaps = 7/195 (3%)
Frame = +3
Query: 38 CPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVS-DVCKLHPLIDQFIPTLQ 96
CP C H D + GLPAGVKFDP DQE++EHLEAKV S ++ K HPLID+FI T++
Sbjct: 303 CPRCGHKFDQGKPDWL-GLPAGVKFDPTDQELIEHLEAKVESKNMQKSHPLIDEFILTIE 479
Query: 97 GDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDD------EGSETRW 150
G++GICYTHPEKLPGV++DG RHFFHRPSKAYTTGTRKRRK+ T++ G ETRW
Sbjct: 480 GEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGSTGGETRW 659
Query: 151 HKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVV 210
HKTGKTR V G KG KKI+VLYTNFG+ RKPEKTNWVMHQYHLG +EEE++GELVV
Sbjct: 660 HKTGKTRPVMVNGKQ-KGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVV 836
Query: 211 SKVFYQTQPRQCGTS 225
SK+FYQTQPRQC S
Sbjct: 837 SKIFYQTQPRQCNWS 881
>TC82629 similar to GP|7269704|emb|CAB79652.1 predicted protein {Arabidopsis
thaliana}, partial (52%)
Length = 790
Score = 275 bits (703), Expect = 1e-74
Identities = 130/173 (75%), Positives = 147/173 (84%), Gaps = 4/173 (2%)
Frame = +3
Query: 38 CPSCSHNTDVRDQG-GIH---GLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIP 93
CP+C H+ +DQG GIH GLPAGVKFDP DQEILEHLEAKV SD+ LHPLID+FIP
Sbjct: 261 CPTCGHHIKCQDQGAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIP 440
Query: 94 TLQGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKT 153
TL+G+NGIC THPEKLPGV KDG +RHFFHRPSKAYTTGTRKRRKVHTD +GSETRWHKT
Sbjct: 441 TLEGENGICCTHPEKLPGVGKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKT 620
Query: 154 GKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDG 206
GKTR VF G +KG+KKI+VLYTN+ +QRKPEKTNWVMHQYHLG+ + + G
Sbjct: 621 GKTRPVFV-SGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNMKRRKKG 776
>CB893164 weakly similar to GP|6016718|gb| hypothetical protein {Arabidopsis
thaliana}, partial (45%)
Length = 818
Score = 201 bits (511), Expect = 2e-52
Identities = 101/199 (50%), Positives = 130/199 (64%), Gaps = 5/199 (2%)
Frame = +3
Query: 37 KCPSCSHNTDVRDQGGIH-GLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTL 95
+CP+C D D G P G+KFDP+D EILEHL AK + K H I++FIPTL
Sbjct: 156 ECPNCHSRIDNSDVSSEWPGFPLGIKFDPSDVEILEHLAAKCGAGNIKPHMFIEEFIPTL 335
Query: 96 QGDNGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVH----TDDEGSETRWH 151
+G+ GICYTHPE LPG KDG HFFHR AY++G RKRRK+H T+D RWH
Sbjct: 336 EGEQGICYTHPENLPGAKKDGSSVHFFHRTMNAYSSGQRKRRKIHHRGSTED---HVRWH 506
Query: 152 KTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVS 211
KTGKT+A+ G KGFKKIMVLY ++ K K++W MHQYHLG++E+E++GE VVS
Sbjct: 507 KTGKTKAIIE-HGEHKGFKKIMVLYIRSEKESKSYKSDWKMHQYHLGTDEDEKNGEYVVS 683
Query: 212 KVFYQTQPRQCGTSIIRDP 230
K+FY+ + + +P
Sbjct: 684 KIFYKQNEKNEEKPMAEEP 740
>CA917030 similar to GP|18461166|dbj contains ESTs AU090550(E2560)
AU063972(E2560)~similar to Arabidopsis thaliana
chromosome 4 F20O9., partial (25%)
Length = 724
Score = 163 bits (413), Expect = 4e-41
Identities = 76/88 (86%), Positives = 82/88 (92%)
Frame = +2
Query: 136 RRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQY 195
RRKV TD+EGSETRWHKTGKTR VF G +KGFKKI+VLYTN+GRQ+KPEKTNWVMHQY
Sbjct: 2 RRKVQTDEEGSETRWHKTGKTRPVFIDG-VMKGFKKILVLYTNYGRQKKPEKTNWVMHQY 178
Query: 196 HLGSNEEEQDGELVVSKVFYQTQPRQCG 223
HLGSNEEE+DGELVVSKVFYQTQPRQCG
Sbjct: 179 HLGSNEEEKDGELVVSKVFYQTQPRQCG 262
>BF634786 similar to GP|7269704|emb| predicted protein {Arabidopsis
thaliana}, partial (18%)
Length = 673
Score = 90.5 bits (223), Expect = 5e-19
Identities = 44/56 (78%), Positives = 48/56 (85%), Gaps = 3/56 (5%)
Frame = +1
Query: 52 GIH---GLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYT 104
GIH GLPAGVKFDP DQEILEHLEAKV SD+ LHPLID+FIPTL+G+NGIC T
Sbjct: 505 GIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIPTLEGENGICCT 672
>AW329169 similar to PIR|E84636|E84 NAM (no apical meristem)-like protein
[imported] - Arabidopsis thaliana, partial (52%)
Length = 631
Score = 70.9 bits (172), Expect = 4e-13
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 6/173 (3%)
Frame = +3
Query: 48 RDQGGIHG-LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHP 106
R+ GG LP G +F P D+E++ +SD F D + + P
Sbjct: 6 RESGGKEETLPPGFRFHPTDEELITCYLINKISD--------SSFTGKAITDIDLNKSEP 161
Query: 107 EKLPGVSKDGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAG-GG 164
+LPG +K G+ +FF+ + Y TG R R +T W TGK R +F
Sbjct: 162 WELPGKAKMGEKEWYFFNMRDRKYPTGVRTNRATNTG------YWKTTGKDREIFDSVTS 323
Query: 165 AVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSN---EEEQDGELVVSKVF 214
+ G KK +V Y GR + EK+NWVMH+Y + S + E V+ ++F
Sbjct: 324 ELVGMKKTLVFYK--GRAPRGEKSNWVMHEYRIHSKSTFRTNKQDEWVICRIF 476
>TC79441 similar to GP|9757865|dbj|BAB08499.1 NAM (no apical meristem)-like
protein {Arabidopsis thaliana}, partial (61%)
Length = 1247
Score = 70.9 bits (172), Expect = 4e-13
Identities = 50/143 (34%), Positives = 65/143 (44%), Gaps = 1/143 (0%)
Frame = +3
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H K V D F GD + + P LP +K
Sbjct: 189 LPPGFRFHPTDEELISHYLYKKVID--------SNFSARAIGDVDLNKSEPWDLPFKAKM 344
Query: 116 GQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +FF + Y TG R R W TGK + +F G V G KK +V
Sbjct: 345 GEKEWYFFCVRDRKYPTGLRTNRATEAG------YWKATGKDKEIFKGKSLV-GMKKTLV 503
Query: 175 LYTNFGRQRKPEKTNWVMHQYHL 197
Y GR K EK+NWVMH+Y L
Sbjct: 504 FYK--GRAPKGEKSNWVMHEYRL 566
>TC86725 similar to GP|9758909|dbj|BAB09485.1 NAM (no apical meristem)-like
protein {Arabidopsis thaliana}, partial (50%)
Length = 1645
Score = 69.7 bits (169), Expect = 9e-13
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Frame = +3
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLI--DQFIPTLQGDNGICYTHPEKLPGVS 113
LP G +F P D EI+ VC L + +F T G+ + P LP +
Sbjct: 177 LPPGFRFHPTDAEII----------VCYLTEKVKNSKFSATAIGEADLNKCEPWDLPKKA 326
Query: 114 KDGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVK---GF 169
K G+ +FF + + Y TG R R + W TGK + ++ G ++ G
Sbjct: 327 KMGEKEWYFFCQKDRKYPTGMRTNRATESG------YWKATGKDKEIYHKGKGIQNLVGM 488
Query: 170 KKIMVLYTNFGRQRKPEKTNWVMHQYHLGSN------EEEQDGELVVSKVFYQ 216
KK +V Y GR K EKTNWVMH++ L ++ E VVS+VF++
Sbjct: 489 KKTLVFYK--GRAPKGEKTNWVMHEFRLEGKFATHNLPNKEKDEWVVSRVFHK 641
>TC79575 similar to GP|7715611|gb|AAF68129.1| F20B17.1 {Arabidopsis
thaliana}, partial (58%)
Length = 1324
Score = 61.2 bits (147), Expect = 3e-10
Identities = 48/162 (29%), Positives = 73/162 (44%), Gaps = 3/162 (1%)
Frame = +2
Query: 56 LPAGVKFDPNDQEILEH-LEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
+P G +F P D+E+L + L KV + L + + + L+ + +K S
Sbjct: 128 VPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNRLEP-----WDLKDKCRIGSG 292
Query: 115 DGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
+FF K Y TGTR R + W TG+ +A++ G +K +V
Sbjct: 293 PQNEWYFFSHKDKKYPTGTRTNRAT------TAGFWKATGRDKAIYHTNSKRIGMRKTLV 454
Query: 175 LYTNFGRQRKPEKTNWVMHQYHL--GSNEEEQDGELVVSKVF 214
YT GR KT+W+MH+Y L N E Q+ VV +VF
Sbjct: 455 FYT--GRAPHGHKTDWIMHEYRLDDDDNAEVQEDGWVVCRVF 574
>TC90118 homologue to GP|15795116|dbj|BAB02380. jasmonic acid regulatory
protein-like {Arabidopsis thaliana}, partial (43%)
Length = 612
Score = 60.5 bits (145), Expect = 5e-10
Identities = 48/167 (28%), Positives = 69/167 (40%), Gaps = 2/167 (1%)
Frame = +3
Query: 37 KCPSCSHNTDVRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQ 96
K S +TD LP G +F P D+E++ H K + PL I +
Sbjct: 84 KTSSNMESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASA----PLPVAIIAEVD 251
Query: 97 GDNGICYTHPEKLPGVSKDGQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGK 155
+ P +LP + G+ +F P + Y G R R + W TG
Sbjct: 252 ----LYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAA------TSGYWKATGT 401
Query: 156 TRAVFAGGGAVK-GFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNE 201
+ V GG K G KK +V Y G+ + KTNW+MH+Y L N+
Sbjct: 402 DKPVLTSGGTQKVGVKKALVFYG--GKPPRGIKTNWIMHEYRLADNK 536
>TC77792 similar to GP|1418990|emb|CAA99760.1 unknown {Lycopersicon
esculentum}, partial (52%)
Length = 1022
Score = 60.5 bits (145), Expect = 5e-10
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Frame = +1
Query: 56 LPAGVKFDPNDQE-ILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSK 114
LP G +F P D+E ++++L+ KV S PL IP + +C + P LPG +
Sbjct: 436 LPPGFRFHPTDEELVVQYLKRKVFS-----FPLPASIIPEVD----LCKSDPWDLPGDME 588
Query: 115 DGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVF-AGGGAVKGFKKIM 173
Q R+FF Y G R R ++ W TG + + + V G KK +
Sbjct: 589 --QERYFFSTKEAKYPNGNRSNRATNSG------YWKATGLDKQIMNSKTHEVAGMKKTL 744
Query: 174 VLYTNFGRQRKPEKTNWVMHQYHLGSN 200
V Y G+ +T+W+MH+Y L S+
Sbjct: 745 VFYR--GKPPHGSRTDWIMHEYRLTSS 819
>TC78189 homologue to GP|14485513|emb|CAC42087. putative NAC domain protein
{Solanum tuberosum}, partial (56%)
Length = 1556
Score = 59.7 bits (143), Expect = 9e-10
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Frame = +2
Query: 34 HTIKCPSCSHNTD-------VRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHP 86
++++ S HNT+ R QG + LP G +F P D E++ H + + + P
Sbjct: 41 NSLQYQSTQHNTEEEKEEYTTRMQGALE-LPPGFRFHPTDDELVNHYLCRKCASLPIAVP 217
Query: 87 LIDQFIPTLQGDNGICYTHPEKLPGVSKDGQVRHFFHRP-SKAYTTGTRKRRKVHTDDEG 145
+I + + P LP ++ G+ +F P + Y G+R R T
Sbjct: 218 IIKEI--------DLYKFDPWHLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTG--- 364
Query: 146 SETRWHKTGKTRAVFAGGGAVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGS 199
W TG + + G G KK +V Y G+ K KTNW+MH+Y L +
Sbjct: 365 ---YWKATGADKPI--GKPKALGIKKALVFYA--GKAPKGIKTNWIMHEYRLAN 505
>BG646875 similar to GP|21593065|gb NAM / CUC2-like protein {Arabidopsis
thaliana}, partial (42%)
Length = 760
Score = 58.9 bits (141), Expect = 2e-09
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Frame = +3
Query: 47 VRDQGGIHGLPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHP 106
+RD G LP G +F P+D+E++ H K +++ L +++ D C P
Sbjct: 126 LRDVGA--SLPPGFRFYPSDEELVLHYLYKKITNEDVLKGTLEEI------DLHTC--EP 275
Query: 107 EKLPGVSKDGQVR-HFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAG-GG 164
+LP V+K +FF + Y TG R R + W TGK R VF
Sbjct: 276 WQLPEVAKLNATEWYFFSFRDRKYATGFRTNRAT------TSGYWKATGKDRTVFDPITH 437
Query: 165 AVKGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGELVVSKVFYQ 216
V G +K +V Y N R KT W+MH++ L + + V+ +VF++
Sbjct: 438 EVVGMRKTLVFYRN--RAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHK 587
>TC77156 homologue to GP|13877717|gb|AAK43936.1 OsNAC6 protein-like protein
{Arabidopsis thaliana}, partial (66%)
Length = 1096
Score = 57.8 bits (138), Expect = 3e-09
Identities = 41/143 (28%), Positives = 63/143 (43%), Gaps = 1/143 (0%)
Frame = +3
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H + C P+ I + + P LPG++
Sbjct: 258 LPPGFRFHPTDEELVMHYLCRK----CTSQPIAVPIIAEID----LYKYDPWDLPGMATY 413
Query: 116 GQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +F P + Y G+R R + W TG + + G G KK +V
Sbjct: 414 GEKEWYFFSPRDRKYPNGSRPNRAAGSG------YWKATGADKPI--GHPKPVGIKKALV 569
Query: 175 LYTNFGRQRKPEKTNWVMHQYHL 197
Y G+ K +KTNW+MH+Y L
Sbjct: 570 FYA--GKAPKGDKTNWIMHEYRL 632
>TC80936 similar to GP|15795116|dbj|BAB02380. jasmonic acid regulatory
protein-like {Arabidopsis thaliana}, partial (38%)
Length = 1254
Score = 57.4 bits (137), Expect = 5e-09
Identities = 46/156 (29%), Positives = 66/156 (41%), Gaps = 9/156 (5%)
Frame = +2
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D E++ H K ++ + PL I + I P LP +
Sbjct: 56 LPPGFRFHPTDAELILHYLRKKIASI----PLPVSIIAEVD----IYKLDPWDLPAKASF 211
Query: 116 GQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFA----GGGA----V 166
G+ +F P + Y G R R + W TG + + A GGG +
Sbjct: 212 GEKEWYFFSPRDRKYPNGARPNRAA------ASGYWKATGTDKTIVASLPCGGGRSQENI 373
Query: 167 KGFKKIMVLYTNFGRQRKPEKTNWVMHQYHLGSNEE 202
G KK +V Y G+ K KTNW+MH+Y L N +
Sbjct: 374 IGVKKALVFYK--GKPPKGIKTNWIMHEYRLVDNNK 475
>TC80069 similar to GP|15148914|gb|AAK84884.1 NAC domain protein NAC2
{Phaseolus vulgaris}, partial (63%)
Length = 1058
Score = 55.8 bits (133), Expect = 1e-08
Identities = 42/154 (27%), Positives = 68/154 (43%), Gaps = 1/154 (0%)
Frame = +2
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ + + P IP + I P +LP S
Sbjct: 137 LPPGFRFHPTDEELIVYYLCNQATS----QPCPASIIPEVD----IYKFDPWELPDKSGF 292
Query: 116 GQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
G+ +F P + Y G R R + W TG +++F+G + G KK +V
Sbjct: 293 GENEWYFFTPRERKYPNGVRPNRATVSG------YWKATGTDKSIFSGSKHI-GVKKALV 451
Query: 175 LYTNFGRQRKPEKTNWVMHQYHLGSNEEEQDGEL 208
Y GR K KT+W+MH+Y L + + + ++
Sbjct: 452 FYK--GRPPKGIKTDWIMHEYRLIGSRRQANRQI 547
>TC87447 homologue to GP|15148912|gb|AAK84883.1 NAC domain protein NAC1
{Phaseolus vulgaris}, partial (92%)
Length = 1496
Score = 55.5 bits (132), Expect = 2e-08
Identities = 49/170 (28%), Positives = 75/170 (43%), Gaps = 7/170 (4%)
Frame = +2
Query: 56 LPAGVKFDPNDQEIL-EHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVS- 113
LP G +F P D+E++ ++L KV D F+ + D C P +P +
Sbjct: 110 LPPGFRFHPRDEELVCDYLMKKVTHS--------DSFL-MIDVDLNKC--EPWDIPEAAC 256
Query: 114 KDGQVRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIM 173
G+ +F+ + + Y TG R R + W TGK RA+ G V G +K +
Sbjct: 257 VGGKEWYFYTQRDRKYATGLRTNRAT------ASGYWKATGKDRAILRKGTLV-GMRKTL 415
Query: 174 VLYTNFGRQRKPEKTNWVMHQY-----HLGSNEEEQDGELVVSKVFYQTQ 218
V Y GR K KT WVMH++ H + V+ +VFY+ +
Sbjct: 416 VFYQ--GRAPKGRKTEWVMHEFRIEGPHGPPKISSSKEDWVLCRVFYKNR 559
>TC88609 similar to GP|15148914|gb|AAK84884.1 NAC domain protein NAC2
{Phaseolus vulgaris}, partial (71%)
Length = 1076
Score = 54.7 bits (130), Expect = 3e-08
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +1
Query: 56 LPAGVKFDPNDQEILEHLEAKVVSDVCKLHPLIDQFIPTLQGDNGICYTHPEKLPGVSKD 115
LP G +F P D+E++ H + P IP + I P +LP S+
Sbjct: 31 LPPGFRFHPTDEELIVHYLCNQATS----KPCPASIIPEVD----IYKCDPWELPDKSEF 186
Query: 116 GQVRHFFHRP-SKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAGGGAVKGFKKIMV 174
+ +F P + Y G R R + W TG +A+ +G + G KK +V
Sbjct: 187 EENEWYFFSPRERKYPNGVRPNRATLSG------YWKATGTDKAIKSGSKQI-GVKKSLV 345
Query: 175 LYTNFGRQRKPEKTNWVMHQYHLGSNEEE 203
Y GR K KT+W+MH+Y L ++++
Sbjct: 346 FYK--GRPPKGVKTDWIMHEYRLIGSQKQ 426
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.136 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,599,514
Number of Sequences: 36976
Number of extensions: 103084
Number of successful extensions: 547
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of query: 230
length of database: 9,014,727
effective HSP length: 93
effective length of query: 137
effective length of database: 5,575,959
effective search space: 763906383
effective search space used: 763906383
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Lotus: description of TM0336.3