TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0333b.4
         (162 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC77850 weakly similar to PIR|H96517|H96517 protein T2E6.22 [imp...   155  5e-39
TC82855 weakly similar to PIR|T45829|T45829 hypothetical protein...    27  3.6
BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xy...    26  8.0
TC77067 weakly similar to PIR|C96759|C96759 protein serine carbo...    26  8.0

>TC77850 weakly similar to PIR|H96517|H96517 protein T2E6.22 [imported] -
           Arabidopsis thaliana, partial (65%)
          Length = 1485

 Score =  155 bits (393), Expect = 5e-39
 Identities = 91/156 (58%), Positives = 110/156 (70%), Gaps = 3/156 (1%)
 Frame = +2

Query: 7   QDGLSPLIGKMASEPGFLEGRLPQHKVKLASFKIPRFDISFAFEASDVLKELGVVLPFSQ 66
           +DGL+ L+ K+ASE   L+ +LP  KV++  F+IP+F+ISF  E SD+LKELGVVLPFS 
Sbjct: 767 KDGLAALVEKVASESELLQHKLPFGKVEVGDFRIPKFNISFGLETSDMLKELGVVLPFSG 946

Query: 67  GDADFTKMVKVNTPFNELYVESIFQKVFIKVHEEGTEAAAATIRA--LRGGGGPPQGLKF 124
           G    TKMV  +   N L V +IF K FI+V+EEGTEAAAAT     LR     P  L F
Sbjct: 947 G--GLTKMVNSSVSQN-LCVSNIFHKSFIEVNEEGTEAAAATAATILLRSAMSIPPRLDF 1117

Query: 125 VADHPFLFLIREDFSGTILFVGQVLNPLGG-ANGTT 159
           VADHPFLF+IRED +GTI+FVGQVLNPL G   GTT
Sbjct: 1118VADHPFLFMIREDLTGTIIFVGQVLNPLAG*FEGTT 1225


>TC82855 weakly similar to PIR|T45829|T45829 hypothetical protein F2K15.100 -
            Arabidopsis thaliana, partial (63%)
          Length = 1447

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 31/121 (25%), Positives = 55/121 (44%), Gaps = 5/121 (4%)
 Frame = +1

Query: 2    LHRLLQDGLSPLIGKMASEPGFLEGRLPQHKVKLASFKIPRFDISFAFEASDVLKELGVV 61
            ++  L DGL   +GK+     F +  + + K+ +AS++     +S A    DVL+ + ++
Sbjct: 931  VYNRLVDGLVK-VGKIDDAKFFFDLMVKKLKMDVASYQFMMKVLSEAGRLDDVLQIVNML 1107

Query: 62   LPFSQGDAD--FTKMVKV---NTPFNELYVESIFQKVFIKVHEEGTEAAAATIRALRGGG 116
            L  +  D D  F + VKV        E   + + +K  +K   +  EA AA     + G 
Sbjct: 1108 LDDNGVDFDEEFQEFVKVELRKEGREEDLAKLMEEKERLKAEAKAKEAEAAEAARNKKGS 1287

Query: 117  G 117
            G
Sbjct: 1288 G 1290


>BQ151174 similar to GP|11036868|gb| PxORF73 peptide {Plutella xylostella
           granulovirus}, partial (42%)
          Length = 909

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = -1

Query: 114 GGGGPPQGLKFVADHPFLFLIREDFSGTILFVG 146
           GGGGPP G  FV   P LF +     G + F G
Sbjct: 612 GGGGPPPGALFVC-FPLLFGV----GGGVFFSG 529


>TC77067 weakly similar to PIR|C96759|C96759 protein serine carboxypeptidase
           T18K17.3 [imported] - Arabidopsis thaliana, partial
           (71%)
          Length = 1582

 Score = 25.8 bits (55), Expect = 8.0
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 27  RLPQHKVKLASFKIPRFDI 45
           + PQHK ++A+FK+P+  I
Sbjct: 979 QFPQHKSQIATFKLPKLYI 1035


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.143    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,127,490
Number of Sequences: 36976
Number of extensions: 47304
Number of successful extensions: 178
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of query: 162
length of database: 9,014,727
effective HSP length: 89
effective length of query: 73
effective length of database: 5,723,863
effective search space: 417841999
effective search space used: 417841999
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)