TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0331c.6
         (426 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC80014 weakly similar to GP|21536784|gb|AAM61116.1 unknown {Ara...    53  3e-07
BI312288 similar to PIR|T49048|T490 hypothetical protein T5P19.1...    52  6e-07
TC89529 homologue to PIR|H86400|H86400 protein T17H3.7 [imported...    42  5e-04
AL386632 similar to SP|P93711|CAMT_ Caffeoyl-CoA O-methyltransfe...    31  0.80
CA921270 similar to GP|18481964|gb Putative receptor-like protei...    31  1.0
TC77260 homologue to GP|14090214|dbj|BAB55475. putative fructose...    29  3.9
TC90231 similar to GP|8978275|dbj|BAA98166.1 receptor protein ki...    28  5.2
TC83227 weakly similar to PIR|T05059|T05059 hypothetical protein...    28  5.2
TC86089 similar to PIR|S71172|S71172 protein kinase  41K (EC 2.7...    28  5.2
TC85465 homologue to SP|Q04708|PROC_PEA Pyrroline-5-carboxylate ...    28  5.2
BG586345                                                               28  8.8
TC86853 similar to GP|20198043|gb|AAD21708.2 26S proteasome regu...    28  8.8

>TC80014 weakly similar to GP|21536784|gb|AAM61116.1 unknown {Arabidopsis
           thaliana}, partial (25%)
          Length = 1587

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 49/178 (27%), Positives = 77/178 (42%), Gaps = 4/178 (2%)
 Frame = +2

Query: 135 PWLLYVHNNLAIIRSILDPTE--TYSRSIPELSGANLLTVQHGGWCVLEKGGKEKVRELL 192
           PWL+Y            DP +  TYS   PEL+G+ +   +  GW +L +   ++V    
Sbjct: 299 PWLMYFPK-FGQWYEFYDPVQRKTYSIEFPELNGSRVCYTK-DGWLLLYRPRTDRV---F 463

Query: 193 LWNPFLQEKIHLPSLKHENRIRNCILSCSPTETDQVCSIFLFPHEAYGYGPNI--LFYCE 250
            +NPF +E I +P  + E   +    SC+PT  D  C +F   H      P I  +  C 
Sbjct: 464 FFNPFTRETIKMP--RFEMTYQIVAFSCAPTSPD--CVLFTVKH----VSPTIVAISTCH 619

Query: 251 VGDKQWFAVDYRKDLVRASPPEEDGVVYNPFLYSPVYFNGRLYAVSYSRLLVIIEKLE 308
            G  +W  V+Y+  L   S       ++N      V+ NG  Y +S +  L + +  E
Sbjct: 620 PGATEWVTVNYQNRLPFVSS------IWNKL----VFCNGLFYCLSLTGWLGVFDPSE 763


>BI312288 similar to PIR|T49048|T490 hypothetical protein T5P19.120 -
           Arabidopsis thaliana, partial (18%)
          Length = 705

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 50/179 (27%), Positives = 76/179 (41%), Gaps = 5/179 (2%)
 Frame = +2

Query: 135 PWLLYVHNNLAIIRSILDPTE--TYSRSIPELSGANLLTVQHGGWCVLEKGGKEKV---R 189
           PWL+Y            DP +  TYS  +PEL G  +   +  GW +L +    ++    
Sbjct: 200 PWLMYFPKK-GNCYDFYDPVQRKTYSLELPELDGCRVCYTK-DGWLLLNRQDWRRLDGNH 373

Query: 190 ELLLWNPFLQEKIHLPSLKHENRIRNCILSCSPTETDQVCSIFLFPHEAYGYGPNILFYC 249
              L+NPF ++ I LP  K +   +    SC+PT T  V  IF       G     +  C
Sbjct: 374 IFSLFNPFTRDLITLP--KFDRTYQIAAFSCAPTSTGCVILIF----RRVGSSLVAISTC 535

Query: 250 EVGDKQWFAVDYRKDLVRASPPEEDGVVYNPFLYSPVYFNGRLYAVSYSRLLVIIEKLE 308
             G+K+W  V+Y  +L   S    D +V++         NG  Y +S    L + + LE
Sbjct: 536 YPGEKEWTTVNYDAEL---SCSMCDKLVFS---------NGLFYCLSDRGWLGVFDPLE 676


>TC89529 homologue to PIR|H86400|H86400 protein T17H3.7 [imported] -
           Arabidopsis thaliana, partial (1%)
          Length = 1745

 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 63/297 (21%), Positives = 111/297 (37%), Gaps = 23/297 (7%)
 Frame = +1

Query: 151 LDPTETYSRSIPELSGANLLTVQHGGWCVLEKGGKEKVRELLLWNPFLQEKIHLPSL--- 207
           L   + +  + P  SG   +     GW V+     ++   L L NP     + LPSL   
Sbjct: 631 LSTNKIHRLNFPLPSGPTRICGSSHGWLVI----LDETSNLNLLNPVTHATLSLPSLHTF 798

Query: 208 -----------KHENRIRNCILSCSPTETDQVCSIFLFPHEAYGYGPNILFYCEVGDKQW 256
                      K+   +   +LS +P+  D   +  +        G   L +C  G   W
Sbjct: 799 PYLVKKLFAFNKNNLYLIKVVLSSNPSPNDDFAAFAIL-------GLRHLAFCRKGCDSW 957

Query: 257 FAVDYRKDLVRASPPEEDGVVYNPFLYSPVYFNGRLYAVSYSRLLVIIEKLEPPNGLQIH 316
             +D                         VY NG  +A+S S +  + + +E P    I 
Sbjct: 958 VLLDAN---------------VGDHWTDAVYKNGSFFAMSTSGITAVCDVVEGPRVSYIP 1092

Query: 317 S-ADVYLPDPFPHTFPCLRQLLV--CNHELFHIQISMEYNKIFGIA--VHKLNFSHMIWE 371
               +Y  D F   F     LL+  C  E +  +    Y  +  +   ++K+N++ + WE
Sbjct: 1093PPTSLYYNDVFYAVFSGEEMLLIQRCCTEEYEPRDFEPYPDMSTVKFWIYKMNWNMLKWE 1272

Query: 372 RVKSIKDMVFFL-SDKDLPFARRVNPG-GGGLIYFT-SMNNKFVH-IFNLEDNSLRI 424
            ++++ +   F+  +  L F+     G     IYFT  +  K  H I++L D S+ +
Sbjct: 1273EIQTLGEHSLFIGKNYSLSFSAADFAGCCPNCIYFTDDIGGKHDHGIYSLSDESIEL 1443


>AL386632 similar to SP|P93711|CAMT_ Caffeoyl-CoA O-methyltransferase (EC
           2.1.1.104) (Trans-caffeoyl-CoA 3-O-methyltransferase)
           (CCOAMT), partial (30%)
          Length = 508

 Score = 31.2 bits (69), Expect = 0.80
 Identities = 11/26 (42%), Positives = 18/26 (68%)
 Frame = -3

Query: 320 VYLPDPFPHTFPCLRQLLVCNHELFH 345
           +YLP P P T+P  + ++ C+ +LFH
Sbjct: 266 LYLPFPHPQTWPLNQTIMCCHMQLFH 189


>CA921270 similar to GP|18481964|gb Putative receptor-like protein kinase
           {Oryza sativa}, partial (18%)
          Length = 842

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 23/77 (29%), Positives = 37/77 (47%), Gaps = 5/77 (6%)
 Frame = +3

Query: 315 IHSADVYLPDPFPHTFPCLRQLLVCNHELFH---IQISMEYNKIFGIAVHKLNF--SHMI 369
           +HS   +L + FPH +PCLR +L   H   H    Q+ M +  I    +   NF  SH +
Sbjct: 255 LHSPFYHLSN-FPHCWPCLRPILQAPHRSLHHSVNQLKMCFTIISMTNLTIKNFFNSHFL 431

Query: 370 WERVKSIKDMVFFLSDK 386
              +KS    + F++ +
Sbjct: 432 KHLIKSPSRKIPFITPR 482


>TC77260 homologue to GP|14090214|dbj|BAB55475. putative
           fructose-bisphosphate aldolase {Oryza sativa (japonica
           cultivar-group)}, partial (89%)
          Length = 1575

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -1

Query: 190 ELLLWNPFLQEKIHLPSLKHENRIRNCILSCSPTETDQVCSIFLFPH 236
           +LL+   FLQ K H   + H +R+ +  ++C P +  Q C I L P+
Sbjct: 516 QLLIGKGFLQRK*HQRCI-HLDRVWSVKVACKPGD*PQYCPIQLMPN 379


>TC90231 similar to GP|8978275|dbj|BAA98166.1 receptor protein kinase-like
           {Arabidopsis thaliana}, partial (8%)
          Length = 694

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/31 (38%), Positives = 19/31 (60%)
 Frame = +1

Query: 141 HNNLAIIRSILDPTETYSRSIPELSGANLLT 171
           HNNL  +R +L      S  +P+L+G N+L+
Sbjct: 205 HNNLTNVRELLVSKNRLSGPLPDLTGMNVLS 297


>TC83227 weakly similar to PIR|T05059|T05059 hypothetical protein M3E9.120 -
           Arabidopsis thaliana, partial (3%)
          Length = 820

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +1

Query: 143 NLAIIRSILDPTETYSRS-IPELSGANLLTVQHGGWCVLEKGG--KEKVRELLLWNP 196
           NL  I+  +D     S + +PE  G + L+ + G   VLE+GG  KE  + L  W P
Sbjct: 142 NLVKIQPYMDDKGQESTAELPEFGGCSSLSEERGEKRVLEEGGDVKEGTKRLREWVP 312


>TC86089 similar to PIR|S71172|S71172 protein kinase  41K (EC 2.7.1.-) -
            Arabidopsis thaliana, partial (96%)
          Length = 1835

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -1

Query: 144  LAIIRSILDPTETYSRSIPELSGANLLTVQHGGWCVLEKGGKEKVRELLLWNP---FLQE 200
            L+I++S  +P  TYS   P    A LLT      C +   G +++      +P     Q 
Sbjct: 1358 LSILQSTENPGTTYSSIRPNNKNALLLT------CCISSTGNDQISTWHTLSPHCYLYQA 1197

Query: 201  KIHLPS 206
            +IH+PS
Sbjct: 1196 RIHIPS 1179


>TC85465 homologue to SP|Q04708|PROC_PEA Pyrroline-5-carboxylate reductase
           (EC 1.5.1.2) (P5CR) (P5C reductase). [Garden pea] {Pisum
           sativum}, complete
          Length = 1173

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/44 (31%), Positives = 22/44 (49%)
 Frame = -3

Query: 190 ELLLWNPFLQEKIHLPSLKHENRIRNCILSCSPTETDQVCSIFL 233
           ELLL N + Q+  H   L H+N  R   + C  T+  ++  + L
Sbjct: 652 ELLLLNKYKQDHSHSGQLLHQNTYRQLSIFCQLTQIIEI*DLHL 521


>BG586345 
          Length = 254

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 9/16 (56%), Positives = 12/16 (74%)
 Frame = -3

Query: 1   MGGGGIRGDGGRWVSG 16
           +G GG+ G+GGRW  G
Sbjct: 210 VGNGGVEGEGGRWEVG 163


>TC86853 similar to GP|20198043|gb|AAD21708.2 26S proteasome regulatory
           subunit S2 (RPN1) {Arabidopsis thaliana}, partial (55%)
          Length = 1738

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 15/51 (29%), Positives = 23/51 (44%)
 Frame = +2

Query: 38  LLHVWELGFRPVNCFVDCSEVQKVVITNSDVQNYWHGAVILLIREVIARNL 88
           L+H WEL                +V++   V   WH  VILLI++++   L
Sbjct: 188 LVHYWELEL-------------SIVVSRMTVILQWHSLVILLIKKIVRLEL 301


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.323    0.142    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,711,960
Number of Sequences: 36976
Number of extensions: 292030
Number of successful extensions: 1479
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1478
length of query: 426
length of database: 9,014,727
effective HSP length: 99
effective length of query: 327
effective length of database: 5,354,103
effective search space: 1750791681
effective search space used: 1750791681
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)