Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0330.6
         (706 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non...    82  6e-35
TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarot...    92  4e-24
CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [i...    89  4e-18
BG453645                                                               72  1e-12
TC82520                                                                55  8e-12
AW686588                                                               66  4e-11
CA921530                                                               59  5e-09
TC80751 weakly similar to GP|13161403|dbj|BAB33036. CPRD49 {Vign...    54  2e-07
BG586749 weakly similar to GP|18138053|emb tropinone reductase I...    53  4e-07
TC93136                                                                46  4e-05
BF645920                                                               45  7e-05
BF643502                                                               44  2e-04
BG585866                                                               44  3e-04
BG580262                                                               42  6e-04
BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At...    42  8e-04
BG454545                                                               38  0.015
BF650593                                                               37  0.020
BE941032                                                               36  0.044
AW980456                                                               36  0.058
TC85561 weakly similar to GP|4530126|gb|AAD21872.1| receptor-lik...    36  0.058

>TC80819 weakly similar to GP|10140689|gb|AAG13524.1 putative non-LTR
           retroelement reverse transcriptase {Oryza sativa
           (japonica cultivar-group)}, partial (2%)
          Length = 1262

 Score = 82.0 bits (201), Expect(4) = 6e-35
 Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
 Frame = +2

Query: 422 SNMGK--WVNGVWQWEFKWRRNLQGREVGWFEELMVILQGIRLVENKKDTWRWKLEGEGG 479
           ++MG+  W      WE  W R L   E     E  ++L    L +N  D WRW L+   G
Sbjct: 380 ADMGRLGWTVDGRAWE--WTRRLFVWEEECVRECCILLNNFVLQDNVNDKWRWLLDPVNG 553

Query: 480 FSFNSSFVFLQDQYLEEPDPVFNWIWMVPVPSNIKAFVWRVLLGRIQTRDNLLN*QVLHN 539
           +S    + ++          + + +W   +PS +  FVWR+L  R+ T+DNL++  VL  
Sbjct: 554 YSVKVFYRYITSTGHISDRSLVDDVWHKHIPSKVSLFVWRLLRNRLPTKDNLVHRGVL-L 730

Query: 540 ALEAICPLCCLAEESGSHLLFSCSNSMLI*YECHAWLGVSTAQVSDPKVHLLQFSSI 596
           A  A C   C+  ES +HL   C+    +      WLG+ +    + + H +QF+ +
Sbjct: 731 ATNAACVCGCVDSESTTHLFLHCNVFCSLWSLVRNWLGIPSMSSGELRTHFIQFAKM 901



 Score = 44.7 bits (104), Expect(4) = 6e-35
 Identities = 24/74 (32%), Positives = 35/74 (46%), Gaps = 4/74 (5%)
 Frame = +3

Query: 358 SSWWKEIQSITVDNG---WPWFQESVQKTVFAGNATQFWAENWTGSGSLELRFRRLYNLS 414
           S WWK I  +    G     WF+E+++  V  G    FW + W G   L L++ RL +L+
Sbjct: 177 SMWWKTICKVREGVGEGVGNWFEENIRMVVGDGRDAFFWYDTWAGDVPLRLKYPRLLDLA 356

Query: 415 CQKREQVS-NMGKW 427
             K  +V    G W
Sbjct: 357 MDKECKVGLTWGGW 398



 Score = 41.6 bits (96), Expect(4) = 6e-35
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 324 FNMALLGKWKWRFLTEPDSLWCRVVKA 350
           FN++LLGKW WR L + + LW RV+KA
Sbjct: 49  FNLSLLGKWCWRLLVDKEGLWHRVLKA 129



 Score = 38.5 bits (88), Expect(4) = 6e-35
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +1

Query: 615  WSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEWKSNPRICL 670
            W IW  RN  +F         L+++I++ ++ WL+S+   F YS+ +W  N  +C+
Sbjct: 946  WVIWKERNNRLFQNTVTAPFVLIDRIKLHSFLWLKSKQVGFAYSYLDWWKNSLLCM 1113


>TC77455 similar to GP|22335695|dbj|BAC10549. nine-cis-epoxycarotenoid
           dioxygenase1 {Pisum sativum}, partial (43%)
          Length = 1865

 Score = 91.7 bits (226), Expect(2) = 4e-24
 Identities = 77/270 (28%), Positives = 115/270 (42%), Gaps = 16/270 (5%)
 Frame = -2

Query: 358 SSWWKEIQSITVDNGWPWFQESVQKTVFAGNATQFWAENWTGSGSLELRF------RRLY 411
           S WWK++ S+       WF   + + V  G ++ FW + W  S  L   F       RL 
Sbjct: 778 SRWWKDLMSLEEVGRVRWFPRELIRKVGDGRSSFFWKDAWDSSVPLRESFPRAFFPYRLL 599

Query: 412 NLSCQKREQVSNMGKWVNGVWQWEFKWRR-NLQGREVGWFEELMVILQGIRLVENKKDTW 470
            + C     ++  G       +W   WRR  L   E     EL+  L+G+ ++    D W
Sbjct: 598 KMGCGDLWDMNAEGV------RWRLYWRRLELFEWEKERLLELLGRLEGV-VLRYWADIW 440

Query: 471 RWKLEGEGGFSFNSSFVFLQ------DQYLEEPDPVFNWIWMVPVPSNIKAFVWRVLLGR 524
            WK + EG FS NS +  LQ      D+   E + +F  +W    P+ + AF W + L R
Sbjct: 439 VWKPDKEGVFSVNSCYFLLQNLRLLEDRLSYEEEVIFRELWKSKAPAKVLAFSWTLFLDR 260

Query: 525 IQTRDNLLN*QVLHNALEAICPLCCLAEESGSHLLFSCSNSMLI*YECHAWLGVSTAQVS 584
           I T  NL   ++L       C  C   +E+  HL   C     +* E   WL  +   +S
Sbjct: 259 IPTMVNLGKRRLLRVEDSKRCVFCGCQDETVVHLFLHCDVISKV*REVMRWLNFNL--IS 86

Query: 585 DPKVHLLQFSSIGWS---KAQKLGESAIWM 611
            P    L   +I WS   +A+KL + A W+
Sbjct: 85  PPN---LLIHAICWSREVRAKKLRQGA-WL 8



 Score = 38.5 bits (88), Expect(2) = 4e-24
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -3

Query: 316 ISIKD*RLFNMALLGKWKWRFLTEPDSLWCRVVK 349
           + ++D RL N++LL KW WR L +  SLW  V++
Sbjct: 945 LGVRDIRLVNVSLLAKWWWRLLQDQSSLWKEVLE 844


>CA919100 homologue to PIR|G90291|G902 endoglucanase precursor [imported] -
           Sulfolobus solfataricus, partial (3%)
          Length = 789

 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 57/176 (32%), Positives = 83/176 (46%), Gaps = 4/176 (2%)
 Frame = -2

Query: 499 PVFNWIWMVPVPSNIKAFVWRVLLGRIQTRDNLLN*QVLHNALEAICPLCCLAEESGSHL 558
           P    IW   VP  +  F WR+L  R+ T+ NL+   V+      +C   C A ES  HL
Sbjct: 599 PYAEMIWHRQVPLKVSVFAWRLLRDRLPTKSNLIYRGVIPTEA-GLCVSGCGALESAQHL 423

Query: 559 LFSCSNSMLI*YECHAWLG---VSTAQVSDPKVHLLQF-SSIGWSKAQKLGESAIWMSVL 614
             SCS    +      W+G   V T  +SD   H +QF  S G +KA +     IW+   
Sbjct: 422 FLSCSYFASLWSLVRDWIGFVGVDTNVLSD---HFVQFVHSTGGNKASQSFLQLIWLLCA 252

Query: 615 WSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEWKSNPRICL 670
           W +W  RN + FN       +LL++++  +  WL++R   F +  + W SNP  CL
Sbjct: 251 WVLWTERNNMCFNDSITPLPRLLDKVKYLSLGWLKARNASFLFGTFSWWSNPLQCL 84


>BG453645 
          Length = 622

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 36/130 (27%), Positives = 63/130 (47%)
 Frame = +3

Query: 541 LEAICPLCCLAEESGSHLLFSCSNSMLI*YECHAWLGVSTAQVSDPKVHLLQFSSIGWSK 600
           + + C LC L  E+ +H+   C  + L+ +    W  V+     +  VH   +S  G + 
Sbjct: 21  VSSTCVLCNLKVETTTHIFLHCDVASLVWFRVMKWFDVNFLIPPNLFVHWECWSEGGSAN 200

Query: 601 AQKLGESAIWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWY 660
               G   +W + +W +W  RN ++F G     + ++E+I+V + RW+  R       +Y
Sbjct: 201 RVTKGHWLVWHTTIWVLWAKRNDLIFKGLNCVAEDVIEEIKVLS*RWMLERSSTPSCFFY 380

Query: 661 EWKSNPRICL 670
           EW  NPR+CL
Sbjct: 381 EWSWNPRLCL 410


>TC82520 
          Length = 833

 Score = 54.7 bits (130), Expect(2) = 8e-12
 Identities = 29/123 (23%), Positives = 58/123 (46%), Gaps = 1/123 (0%)
 Frame = +2

Query: 549 CLAEESGSHLLFSCSNSMLI*YECHAWLGVSTAQVSDPKVHLLQFSSIGWS-KAQKLGES 607
           C   E+ +HL   C     +      WL +     +D +   +QF+S+  S +       
Sbjct: 317 CGDSETATHLFLHCDIFGSLWSHVLRWLHLLLVLPADIRQFFIQFTSMAGSPRFTHSFLQ 496

Query: 608 AIWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEWKSNPR 667
            +W + +W +W  RN  VF     D    +EQ+++ ++ WL+ +   F +S+++W  +P 
Sbjct: 497 IMWFASVWVLWKKRNNRVFQNSLSDPSTFVEQVKMHSFLWLKFQQATFSFSYHDWWKHPL 676

Query: 668 ICL 670
           +C+
Sbjct: 677 LCM 685



 Score = 33.9 bits (76), Expect(2) = 8e-12
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 504 IWMVPVPSNIKAFVWRVLLGRIQTRDNLLN*QVL 537
           +W   +PS +  FVWR+   R+ T+ NL+   VL
Sbjct: 186 VWQKNIPSKVSMFVWRLFHNRLPTKVNLMQRHVL 287


>AW686588 
          Length = 567

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 38/121 (31%), Positives = 62/121 (50%), Gaps = 2/121 (1%)
 Frame = +1

Query: 509 VPSNIKAFVWRVLLGRIQTRDNLLN*QVLHNALEAI-CPLCCLAEESGSHLLFSCSNSML 567
           VP  +    WR++  R+ T+ NL+  + L  A+EA  C + C   E+ +HL   C+    
Sbjct: 142 VPLKVSILAWRLIRDRLPTKANLVRRRCL--AVEAAGCVVGCGIAETANHLFLHCATFGA 315

Query: 568 I*YECHAWLGVSTAQVSDPKVHLLQF-SSIGWSKAQKLGESAIWMSVLWSIWCLRNMVVF 626
           +     AW+GVS A   D   H +QF +  G ++A++     IW+  +W +W  RN  +F
Sbjct: 316 VWQHIRAWIGVSGADPHDLSDHFIQFITCTGHTRARRSFMQLIWLLCVWMVWNERNNRLF 495

Query: 627 N 627
           N
Sbjct: 496 N 498


>CA921530 
          Length = 793

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 24/76 (31%), Positives = 45/76 (58%), Gaps = 2/76 (2%)
 Frame = -1

Query: 597 GWSKAQKL--GESAIWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDD 654
           GW + +K+  G   IW + +W +W   N  +FN   ++ + ++E+++V +WRW  +R++ 
Sbjct: 634 GWERNKKIRRGLWLIWHATIWILWKAWNNRIFNNQAVEAEDIIEEVKVLSWRWTFNRINI 455

Query: 655 F*YSWYEWKSNPRICL 670
               +YEW  NP+ CL
Sbjct: 454 PVCMYYEWCWNPKYCL 407


>TC80751 weakly similar to GP|13161403|dbj|BAB33036. CPRD49 {Vigna
           unguiculata}, partial (52%)
          Length = 1156

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = +1

Query: 567 LI*YECHAW-LGVSTAQVSDPKVHLLQFSSIG-WSKAQKLGESAIWMSVLWSIWCLRNMV 624
           +I*   H W LGVS+        HL+Q    G +S++ +     +W S +W IW  R+ +
Sbjct: 673 II*SFIHKWFLGVSSTDPPCIPDHLIQLVQ*GGYSRSIRSTLLLVWFSYMWVIWKERSKM 852

Query: 625 VFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEWKSNPRICL 670
           +FN  +    QLLE++++ ++ WL++    F + ++  + NP +C+
Sbjct: 853 IFNQKKDHVHQLLEKVKLLSF*WLKATNSTFPFDYHSRRLNPLLCM 990


>BG586749 weakly similar to GP|18138053|emb tropinone reductase I {Calystegia
           sepium}, partial (11%)
          Length = 787

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 34/118 (28%), Positives = 53/118 (44%)
 Frame = -2

Query: 545 CPLCCLAEESGSHLLFSCSNSMLI*YECHAWLGVSTAQVSDPKVHLLQFSSIGWSKAQKL 604
           C LC    E   HL   C+ +  +  +   WLG       D   H   ++ +  +K  + 
Sbjct: 531 CVLCEGVPEVSEHLFLQCATAK-VWADLLRWLGFDYHTPPDLFFHWKWWNEMSGNKKTRK 355

Query: 605 GESAIWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEW 662
           G   IW         +RN ++FN      D+L+E I+V AWRW+ +RL+     +YEW
Sbjct: 354 GY*IIWR--------VRNDLIFNNSRSGMDELVEAIKVLAWRWVLNRLNLPACMFYEW 205


>TC93136 
          Length = 722

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
 Frame = +1

Query: 541 LEAICPLCCLAEESGSHLLFSCSNSMLI*YECHAWLGVSTAQVSDPKVHLLQFSSIGWSK 600
           +E I        E+ SHL   C     +  +   WL  S          LL+       +
Sbjct: 226 IEQIDRFAMFYNETSSHLFLHCPFLSSVWSKILGWLYYSKFVCV---FRLLE------RR 378

Query: 601 AQKLGESAIWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWY 660
           ++  G   IW + +W IW   N  +F       D+++E+I+V +WRW  +RL      +Y
Sbjct: 379 SRTKGVWLIWHATIWVIWKGINNRIFKNISKAIDEIVEEIKVLSWRWSLTRLKCPPCFYY 558

Query: 661 EWKSNPRICLLS-I*SVGCHGVDCWV 685
           EW  +P  C+     S+G  G+  W+
Sbjct: 559 EWCWDPGDCVSR*FLSMGFSGLLPWL 636


>BF645920 
          Length = 631

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 15/42 (35%), Positives = 30/42 (70%), Gaps = 3/42 (7%)
 Frame = -3

Query: 609 IWM---SVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRW 647
           +W+   + +W+IW  RN ++FN G ++ D ++E+++V +WRW
Sbjct: 626 LWLISTTTVWAIWRARNNIIFNEGIVEVDSMVEEVKVLSWRW 501


>BF643502 
          Length = 631

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 20/62 (32%), Positives = 36/62 (57%)
 Frame = -1

Query: 609 IWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEWKSNPRI 668
           IW+  +W +W  RN V+FN        LL++I++ +  WL+++   F +   + +SNP +
Sbjct: 490 IWLLCVWVVWNERNNVMFNHVVTPIPCLLDKIKLLSLGWLKAKNATFVFGIQQGRSNPLV 311

Query: 669 CL 670
           CL
Sbjct: 310 CL 305


>BG585866 
          Length = 828

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
 Frame = +3

Query: 468 DTWRWKLEGEGGFSFNS--SFVFLQDQYLEEPDPVFNWIWMVPVPSNIKAFVWRVLLGRI 525
           D + W     G ++  S  S++  Q + +   +  ++WIW + +P   K F+W      +
Sbjct: 348 DAYIWPHNSNGVYTAKSGYSWILSQTETVNYNNSSWSWIWRLKIPEKYKFFLWLACHNAV 527

Query: 526 QTRDNLLN*QVLHNALEAICPLCCLAEESGSHLLFSCSNSMLI 568
            T  +LLN + + N+  AIC  C   EES  H +  C  S +I
Sbjct: 528 PTL-SLLNHRNMVNS--AICSRCGEHEESFFHCVRDCRFSKII 647


>BG580262 
          Length = 424

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = +2

Query: 593 FSSIGWSKAQKLGESAIWMSVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWL 648
           FS++ WSK      + IW   +  IW +RN ++F    ++ + ++E I++T+ RWL
Sbjct: 173 FSTLSWSKKHPTELTFIWYVTIRKIWEVRNKIIFFLRRVEMEDIVEGIKLTS*RWL 340


>BG587113 weakly similar to PIR|A84888|A8 hypothetical protein At2g45230
           [imported] - Arabidopsis thaliana, partial (10%)
          Length = 767

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
 Frame = -3

Query: 467 KDTWRWKLEGEGGFSFNSSFVFL--------QDQYLEEP--DPVFNWIWMVPVPSNIKAF 516
           +D++ W+    G +S  S +           Q   +++P  D ++  +W       ++ F
Sbjct: 429 EDSYSWEYSKSGHYSVKSGYYVQTNIIAAANQRGTVDQPSLDDLYQRVWKYNTSPKVRHF 250

Query: 517 VWRVLLGRIQTRDNLLN*QVLHNALEAICPLCCLAEESGSHLLFSCSNSMLI 568
           +WR +   + T  N+ +    H + +  C  C +  E+ +H+LF C  + LI
Sbjct: 249 LWRCISNSLPTAANMRS---RHISKDGSCSRCGMESETVNHILFQCPYARLI 103


>BG454545 
          Length = 520

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 20/60 (33%), Positives = 32/60 (53%)
 Frame = +2

Query: 612 SVLWSIWCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEWKSNPRICLL 671
           + +W I   RN  +F     D  +++++I+V AW+W   RL+     + EW  NPR  LL
Sbjct: 113 AAIWVI*NTRNHRIFKNVVRDVYEIMDEIKVLAWKWSLVRLNIPTCLYNEWSWNPRDFLL 292


>BF650593 
          Length = 486

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 21/54 (38%), Positives = 25/54 (45%)
 Frame = +3

Query: 509 VPSNIKAFVWRVLLGRIQTRDNLLN*QVLHNALEAICPLCCLAEESGSHLLFSC 562
           VP  +   VWR+    + TRDNL    VL +     C   C  EES SH  F C
Sbjct: 306 VPLKVSCLVWRLFQNXLATRDNLSKRGVL-DQNSIXCVXDCGREESVSHFFFEC 464


>BE941032 
          Length = 435

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = +2

Query: 516 FVWRVLLGRIQTRDNLLN*QVLHNALEAICPLCCLAEESGSHLLFSCSNSMLI*YECHAW 575
           F+W VLL R  T+DNLL   V+ +A+   C   C      +HL   C+    I      W
Sbjct: 152 FLWCVLLNRFPTKDNLLKRGVI-SAIYQSCVGECGNLYDATHLFLHCNFFRQIWINVSDW 328

Query: 576 LG---VSTAQVSDPKVHLLQFSSIG 597
           L    V+  ++SD    L QF S G
Sbjct: 329 LSFVMVTLLRISD---RLAQFGSFG 394


>AW980456 
          Length = 779

 Score = 35.8 bits (81), Expect = 0.058
 Identities = 22/67 (32%), Positives = 32/67 (46%), Gaps = 7/67 (10%)
 Frame = -2

Query: 472 WKLEGEGGFSFNSSFVFLQDQ-----YLEEPDPVFNW--IWMVPVPSNIKAFVWRVLLGR 524
           WK E  G +   S++ F  ++     YL  P    NW  IW + VP  ++  VWR+  G 
Sbjct: 196 WKDEKHGKYYVKSAYRFCVEELFDSSYLHRPG---NWSGIWKLKVPPKVQNLVWRMCRGC 26

Query: 525 IQTRDNL 531
           + TR  L
Sbjct: 25  LPTRIRL 5


>TC85561 weakly similar to GP|4530126|gb|AAD21872.1| receptor-like protein
            kinase homolog RK20-1 {Phaseolus vulgaris}, partial (18%)
          Length = 1549

 Score = 35.8 bits (81), Expect = 0.058
 Identities = 18/52 (34%), Positives = 25/52 (47%)
 Frame = +2

Query: 618  WCLRNMVVFNGGELDKDQLLEQIQVTAWRWLRSRLDDF*YSWYEWKSNPRIC 669
            W  RN  +FN     KDQLL  I+  +  WL+     F + +Y W S   +C
Sbjct: 1259 WKERNSRIFNDNMSSKDQLLASIKFHS*WWLKMHKLGFAFDYYYWWSMASLC 1414


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.345    0.151    0.582 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,439,239
Number of Sequences: 36976
Number of extensions: 573897
Number of successful extensions: 7116
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 3886
Number of HSP's successfully gapped in prelim test: 349
Number of HSP's that attempted gapping in prelim test: 2884
Number of HSP's gapped (non-prelim): 4697
length of query: 706
length of database: 9,014,727
effective HSP length: 103
effective length of query: 603
effective length of database: 5,206,199
effective search space: 3139337997
effective search space used: 3139337997
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 62 (28.5 bits)


Lotus: description of TM0330.6