Lotus
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TM0323a.7
         (624 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC89277 weakly similar to GP|20197175|gb|AAC17092.2 unknown prot...   500  0.0
BQ149015 similar to GP|10177541|db gene_id:K1F13.28~pir||T02421~...   230  1e-60
TC80499 similar to GP|20330763|gb|AAM19126.1 Hypothetical protei...   199  3e-54
TC82767 weakly similar to GP|10998130|dbj|BAB03101. gene_id:MEC1...    49  6e-06
TC92863 similar to GP|19715622|gb|AAL91632.1 AT4g37080/C7A10_280...    43  3e-04
BE319400                                                               39  0.005
TC85190 similar to GP|8894548|emb|CAB95829.1 hypothetical protei...    32  0.95
AW697023 similar to GP|5708067|dbj hyperpolarization activated c...    30  2.1
TC83396 similar to GP|22858664|gb|AAN05792.1 unknown {Gossypium ...    30  2.8
AL383509                                                               30  2.8
TC81051 similar to PIR|E96717|E96717 probable transfactor F24J1....    30  2.8
TC80685 similar to PIR|E96717|E96717 probable transfactor F24J1....    30  2.8
TC86898 similar to GP|18376007|emb|CAB91741. probable ATP citrat...    30  3.6
BQ147561 similar to PIR|T13758|T137 NADH dehydrogenase (ubiquino...    30  3.6
BF005803 similar to GP|21740704|emb OSJNBb0011N17.24 {Oryza sati...    30  3.6
TC79094 similar to GP|9759157|dbj|BAB09713.1 gene_id:MEE6.18~unk...    29  4.7
TC80023 similar to PIR|S71750|S71750 import intermediate-associa...    29  6.2
TC81440 weakly similar to GP|9758571|dbj|BAB09184.1 N-hydroxycin...    28  8.1
TC79365 weakly similar to GP|15010698|gb|AAK74008.1 AT3g22600/F1...    28  8.1

>TC89277 weakly similar to GP|20197175|gb|AAC17092.2 unknown protein
           {Arabidopsis thaliana}, partial (34%)
          Length = 1477

 Score =  500 bits (1287), Expect(3) = 0.0
 Identities = 247/305 (80%), Positives = 272/305 (88%), Gaps = 1/305 (0%)
 Frame = +3

Query: 321 PSSSLSSPSAFSIGDQGDMWSPGFRNN-SSFDARLDNSFHGEGVEEFSGPYSTMVEVSWI 379
           P  SLSS S F IGDQGDMWSP F+NN SSFD  LDN FH EG++EFSGPYSTMVE+SWI
Sbjct: 453 PVLSLSSASGFFIGDQGDMWSPRFKNNNSSFDVSLDNPFHVEGLKEFSGPYSTMVEISWI 632

Query: 380 YREGLKWGDIEKLHQKFRSLICRLEEVDPRKLKHEEKLAFWINIHNALVMHAFLAYGIPQ 439
           Y+E  K GD +KL Q ++SLI RLEEVDP KL+HEEKLAFWINIHNALVMHAFLAYGIPQ
Sbjct: 633 YKENQKSGDTKKLLQNYKSLISRLEEVDPGKLEHEEKLAFWINIHNALVMHAFLAYGIPQ 812

Query: 440 NNVKRVFLLLKAAYNVGGRTVSADTIQSTILRCRMSRPGQWLRMFFSSRTKFRSGDGRQT 499
           NN+KRVFLLLKAAY VGG TVSADTIQ+TILRCRMSRPGQWLR+FFSS+TKF++GDGRQ 
Sbjct: 813 NNMKRVFLLLKAAYKVGGYTVSADTIQNTILRCRMSRPGQWLRLFFSSKTKFKTGDGRQA 992

Query: 500 YAIENPEPLSHFALCSGNHSDPAVRVYTPKRVFQELEVAKDEYIRATLGVRRKDQKVLVP 559
           YA+E+ EPLSHFALCSGNHSDPAVR YTPKRVFQ+LEVAKDEYIRATLGV RKDQK+L+P
Sbjct: 993 YALEHLEPLSHFALCSGNHSDPAVRAYTPKRVFQDLEVAKDEYIRATLGV-RKDQKILLP 1169

Query: 560 KLVETFTKDSDMCPGGVMEMIQESLPESLRKSVKKCHQLAKSRKCIEWIPHNFTFRYLIS 619
           KLVE+F KDSD+CP GVM+MI E LPESLRK VKKC Q+ KS+KCIEWIPHNF FRYLIS
Sbjct: 1170KLVESFAKDSDLCPSGVMDMILEPLPESLRKRVKKC-QIPKSKKCIEWIPHNFNFRYLIS 1346

Query: 620 KDVLK 624
           KDVLK
Sbjct: 1347KDVLK 1361



 Score =  150 bits (380), Expect(3) = 0.0
 Identities = 88/134 (65%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
 Frame = +1

Query: 162 AQVVKASLPEVLTKEEYPTVQSNDH-ELEAMRKEHDRNELDNLRKECNGGWPEEKHLDSG 220
           A  VK S+PEVLTK E  T+Q NDH ELE ++ EH R E  +LRKE          LDS 
Sbjct: 4   APFVKPSMPEVLTKTECSTLQYNDHDELETLQNEHSRYEHQSLRKE--------NDLDSR 159

Query: 221 VYRCHSSLSQYSAFTRSSPPAEPLAKSLRACHSQPLSMMEYARGCSSNIISLAEHLGTRI 280
           VYRCHSSLSQ + FTR+S P E L KSLR CHSQPLSMMEY    SSNIISLAEHLGTRI
Sbjct: 160 VYRCHSSLSQCTTFTRASLPEESLTKSLRTCHSQPLSMMEYIEN-SSNIISLAEHLGTRI 336

Query: 281 SDHVLPVTPNKLSE 294
           SDHV PV PNKL E
Sbjct: 337 SDHV-PVEPNKLFE 375



 Score = 51.2 bits (121), Expect(3) = 0.0
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +2

Query: 295 DMVKCISAIYCKLADPPMTLPPGLLSPSS 323
           DMVKCISAIYCKLADPPM + PGL SPSS
Sbjct: 377 DMVKCISAIYCKLADPPM-IHPGLSSPSS 460


>BQ149015 similar to GP|10177541|db gene_id:K1F13.28~pir||T02421~strong
           similarity to unknown protein {Arabidopsis thaliana},
           partial (19%)
          Length = 514

 Score =  230 bits (587), Expect = 1e-60
 Identities = 109/126 (86%), Positives = 116/126 (91%)
 Frame = +3

Query: 408 PRKLKHEEKLAFWINIHNALVMHAFLAYGIPQNNVKRVFLLLKAAYNVGGRTVSADTIQS 467
           P KLKHEEKLA WIN+HNALVMHAFLAYGIPQNNVKRVFLLLKAAYN GG TVSADTIQ+
Sbjct: 135 PGKLKHEEKLAXWINVHNALVMHAFLAYGIPQNNVKRVFLLLKAAYNXGGHTVSADTIQN 314

Query: 468 TILRCRMSRPGQWLRMFFSSRTKFRSGDGRQTYAIENPEPLSHFALCSGNHSDPAVRVYT 527
           TIL CRMSRPGQW R+FFSS+TKF+ GDGRQ YAI++PEPL HFALCS NHSDPAVRVYT
Sbjct: 315 TILGCRMSRPGQWFRVFFSSKTKFKPGDGRQAYAIKHPEPLLHFALCSXNHSDPAVRVYT 494

Query: 528 PKRVFQ 533
           PKRVFQ
Sbjct: 495 PKRVFQ 512



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = +2

Query: 368 GPYSTMVEVSWIYREGLKWGDIEKLHQKFRSLICRLEEVDPRKLKHEEKLAF 419
           G  +  +   WIY+E  K  D E+L Q FRSLIC+LE+VDP +++   +++F
Sbjct: 14  GHIAPWLRYPWIYKENQKLADTEQLLQNFRSLICQLEDVDPGEVETRGEVSF 169


>TC80499 similar to GP|20330763|gb|AAM19126.1 Hypothetical protein {Oryza
           sativa (japonica cultivar-group)}, partial (6%)
          Length = 843

 Score =  199 bits (506), Expect(2) = 3e-54
 Identities = 101/140 (72%), Positives = 119/140 (84%), Gaps = 1/140 (0%)
 Frame = +3

Query: 1   MLGLSFTPRHKRSNSVPD-KNRVENDNAESLKVSAQRMKLDEGYITECAQARKKGAPTSE 59
           MLGL FTPRH RSNS+PD K RVE DN ++   +  R+K+D GY+TECA++R K +P  E
Sbjct: 357 MLGLRFTPRHNRSNSLPDNKKRVEGDNPDNHVEAFDRVKMDMGYVTECAKSRNKQSPKGE 536

Query: 60  IHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATELIKEIAVLE 119
           +HST+KQE LQLERRLQDQFEVR TLEKALG +S SLV+S+E +MPKPATELIKEIAVLE
Sbjct: 537 VHSTMKQEILQLERRLQDQFEVRSTLEKALGNRSSSLVHSNEKMMPKPATELIKEIAVLE 716

Query: 120 MEVVYLEQHLLSLYRKAFDQ 139
           +EVVYLEQHLLSLYRKAFD+
Sbjct: 717 LEVVYLEQHLLSLYRKAFDK 776



 Score = 31.6 bits (70), Expect(2) = 3e-54
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = +2

Query: 132 LYRKAFDQQLSSVSPPTKEESLKYPLTTP 160
           L +K+F  +LSS SP TKEE+ K+  TTP
Sbjct: 752 LVQKSFR*KLSSASPSTKEETGKHSPTTP 838


>TC82767 weakly similar to GP|10998130|dbj|BAB03101. gene_id:MEC18.2~unknown
           protein {Arabidopsis thaliana}, partial (17%)
          Length = 837

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
 Frame = +3

Query: 479 QWLRMF----FSSRTKFRSGDGRQTYAIENPEPLSHFALCSGNHSDPAVRVYTPKRVFQE 534
           ++L+M+    +S    F +GD R   A+    PL HF LC+G  S P VR ++P RV  E
Sbjct: 36  RYLQMYQRSPYSLMKPFSTGDKRLEVALVKLNPLFHFGLCNGTKSSPTVRFFSPHRVVDE 215

Query: 535 LEVAKDEY 542
           L  A  E+
Sbjct: 216 LRGAAREF 239


>TC92863 similar to GP|19715622|gb|AAL91632.1 AT4g37080/C7A10_280
           {Arabidopsis thaliana}, partial (18%)
          Length = 841

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 34/111 (30%), Positives = 58/111 (51%), Gaps = 1/111 (0%)
 Frame = +3

Query: 48  AQARKKGAPTS-EIHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPK 106
           ++  K G P++ E    L Q+  +L+R+L+ +  V   LE+A      SL      + P 
Sbjct: 156 SKGMKTGRPSNREKKIALLQDVDKLKRKLRHEENVHRALERAFTRPLGSLPRLPPYLPPY 335

Query: 107 PATELIKEIAVLEMEVVYLEQHLLSLYRKAFDQQLSSVSPPTKEESLKYPL 157
              EL+ E+AVLE EVV LE+ +++ +R+   Q+   +S     E+L  P+
Sbjct: 336 -TLELLAEVAVLEEEVVRLEEQVVN-FRQGLYQEAVYISSKRNAENLNDPI 482


>BE319400 
          Length = 257

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +1

Query: 205 KECNGGWPEEKHLDSGVYRCHSSLSQYSAFTRSSPPAEPLAKSLRACHSQPL 256
           KECN     E  LDS ++RC+S+LSQ +A +  +       K+  + HS PL
Sbjct: 97  KECNNQLEPESVLDSSIHRCYSALSQQTACSIEASSENIKTKAAYSYHSLPL 252


>TC85190 similar to GP|8894548|emb|CAB95829.1 hypothetical protein {Cicer
           arietinum}, partial (50%)
          Length = 1496

 Score = 31.6 bits (70), Expect = 0.95
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
 Frame = +3

Query: 100 SEMIMPKPATELIKEIAVLEMEVVYLEQ-----HLLSLYRKAFDQQLSSVSPPTKEESLK 154
           +E++  K A E + + + +   V + E+      L  + +KA D+    +    +E   K
Sbjct: 324 AEVVADKVADETVVDESKVSQSVSFKEETNVVSELPDVQKKALDELKQLI----QEALNK 491

Query: 155 YPLTTPRAQVVKASLPEVLTKEEYPTVQSNDHELEAMRKEHDRNELDNLR-KECNGGWPE 213
           +  T P    VKA  PEV  KEE    +      E + ++ D   ++  +  E  G   E
Sbjct: 492 HEFTAPPPAPVKAPEPEVAVKEEKKPEEDEKKTEEVVEEKKDEAVVEEKKVDEEKGSTSE 671

Query: 214 EKHLDS 219
           E  +++
Sbjct: 672 EPKVET 689


>AW697023 similar to GP|5708067|dbj hyperpolarization activated cation
           channel {Oryctolagus cuniculus}, partial (1%)
          Length = 742

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 24/73 (32%), Positives = 31/73 (41%), Gaps = 19/73 (26%)
 Frame = -3

Query: 279 RISDHVLPVTPNKLSEDMVKCISAIYCKLA----DPPMTLPPG---------------LL 319
           R+  H   VT  + S  ++  +S ++C L      PP T PPG               L 
Sbjct: 710 RVETHNTRVTVRRTSRALMAFMSLLHCLLLAPSLTPPSTPPPGPSPSPHPPTWAPHPSLS 531

Query: 320 SPSSSLSSPSAFS 332
            PS SLS P AFS
Sbjct: 530 *PSLSLSLPPAFS 492


>TC83396 similar to GP|22858664|gb|AAN05792.1 unknown {Gossypium hirsutum},
           partial (40%)
          Length = 921

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +3

Query: 56  PTSEIHSTLKQETLQLERRLQDQFEVRCTLEKA 88
           PTSEIH   +Q TLQLE  +Q   +  C L KA
Sbjct: 399 PTSEIH---RQSTLQLELEVQQWHQSFCNLFKA 488


>AL383509 
          Length = 508

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +3

Query: 603 KCIEWIPHNFTFRYLISKDV 622
           K IE  PH+FTF YL+SK++
Sbjct: 33  KGIELTPHDFTFHYLLSKEL 92


>TC81051 similar to PIR|E96717|E96717 probable transfactor F24J1.30
           [imported] - Arabidopsis thaliana, partial (39%)
          Length = 887

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
 Frame = +3

Query: 111 LIKEIAVLEMEVVYLEQHLLSLYRKAFDQQLSSVSPPTKE---ESLKYPLTTPRAQVVKA 167
           +++ + +  + + +L+ HL   YR    QQL + S   K+   E++ +     R ++ + 
Sbjct: 255 IMRVMEIPGLTLYHLKSHLQK-YRLGKSQQLETCSDNKKQVYTETMSWDEQCSR-EIGQR 428

Query: 168 SLPEVLTKEEYPTVQSNDHELEAMRKEHDRNELDN---LRKECNGGWPEEKHLDSGVYRC 224
              ++    E     + + ++E  RK +++ E+     LR +  G     K+L S + + 
Sbjct: 429 DHNQITENMEIS--HALEMQMEVERKLNEQIEVQKHLQLRIDAQG-----KYLQSVLMKA 587

Query: 225 HSSLSQYSAFTRSSPPAEPLAKSL---------RACHSQPLSMMEYARGCSSNIISLAEH 275
             +LS Y+    SSP    L K            AC S P+S +  +RG S N       
Sbjct: 588 QEALSGYN----SSPIGIKLTKDELSQLVTMINNACPSSPISDLTESRGLSLNYEERKHE 755

Query: 276 LGTRISDHVLPVTPNKLSE 294
            GT +      +T ++ SE
Sbjct: 756 NGTSLCSLESSLTSSESSE 812


>TC80685 similar to PIR|E96717|E96717 probable transfactor F24J1.30
           [imported] - Arabidopsis thaliana, partial (42%)
          Length = 963

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 28/118 (23%), Positives = 52/118 (43%), Gaps = 10/118 (8%)
 Frame = +3

Query: 174 TKEEYPTVQSNDHELEAMRKEHDRNELDN---LRKECNGGWPEEKHLDSGVYRCHSSLSQ 230
           T E     ++ + ++E  +K +++ E+      R E  G     K+L S + +   +L+ 
Sbjct: 321 TTESLKIAEALEVQMEVQKKLYEQIEVQKHLQFRIEAQG-----KYLQSVLMKAQEALAG 485

Query: 231 YSAFTRSSPPAEPLAKSLR-------ACHSQPLSMMEYARGCSSNIISLAEHLGTRIS 281
           YS+ + ++      A+  +       AC S PLS +   RG S N     ++ GT  S
Sbjct: 486 YSSSSSTTGVEHAKAELSQLLSIINNACPSSPLSELTETRGFSLNFGERKQNRGTMCS 659


>TC86898 similar to GP|18376007|emb|CAB91741. probable ATP citrate lyase
            subunit 2 {Neurospora crassa}, complete
          Length = 2389

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +3

Query: 262  ARGCSSNIISLAEHLGTRISDHVL---PVTPNKLSEDMVKCISAIYCKLADPPMTLPPGL 318
            AR  SS ++S+      R++   L   PV P+ L       +S +   +  PP + P   
Sbjct: 1437 ARRWSSPLLSVVS*PRRRLTSPTLMPRPVPPSSLLSSTPTAVSGLSSPVVVPPSSTPTPS 1616

Query: 319  LSPSSSLSSPSAFS 332
              P+S  SSP+  S
Sbjct: 1617 PPPASPTSSPTTVS 1658


>BQ147561 similar to PIR|T13758|T137 NADH dehydrogenase (ubiquinone) (EC
           1.6.5.3) chain 5 - Tipularia discolor chloroplast
           (fragment), partial (4%)
          Length = 600

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 34/129 (26%), Positives = 57/129 (43%), Gaps = 26/129 (20%)
 Frame = +2

Query: 17  PDKNRVENDNAESLKVSAQR--------MKLDEGYITECAQARKKGAPT----------- 57
           P+  +V+ D+ E+ KV A++        + LD   I +  QA K+ + +           
Sbjct: 146 PEPEQVKEDSVET-KVEAEKQEQLLQSSLNLDVNEIVDDDQANKRRSLSLLFNKENEDAK 322

Query: 58  -------SEIHSTLKQETLQLERRLQDQFEVRCTLEKALGYKSPSLVNSSEMIMPKPATE 110
                  ++   T+K+ETL+ E+ L+D      TLEK           S E    +P+TE
Sbjct: 323 DSTENEKNKAEETVKEETLETEKPLEDAKSNEPTLEKP----------SQETKNNEPSTE 472

Query: 111 LIKEIAVLE 119
             +E AV+E
Sbjct: 473 --QECAVVE 493


>BF005803 similar to GP|21740704|emb OSJNBb0011N17.24 {Oryza sativa}, partial
           (10%)
          Length = 531

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 19/46 (41%), Positives = 24/46 (51%)
 Frame = -1

Query: 313 TLPPGLLSPSSSLSSPSAFSIGDQGDMWSPGFRNNSSFDARLDNSF 358
           ++PPGL S S SL S  +FSIGD   ++        S D  L N F
Sbjct: 141 SMPPGLSSHSISLFSLQSFSIGDATTLFP-----KPSLDMLLQNLF 19


>TC79094 similar to GP|9759157|dbj|BAB09713.1 gene_id:MEE6.18~unknown protein
            {Arabidopsis thaliana}, partial (10%)
          Length = 1927

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +3

Query: 318  LLSPSSSLSSPSAFSIGDQGDMWSPGFRNNSSF 350
            LLSP SS+ SPS F    +GD    G RNN +F
Sbjct: 1218 LLSPLSSMLSPSHF----KGDSLDIGCRNNEAF 1304


>TC80023 similar to PIR|S71750|S71750 import intermediate-associated 100K
           protein precursor - garden pea, partial (29%)
          Length = 1052

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 7   TPRHKRSNSVPDKNRVENDNAESLKVSAQRMKLD 40
           T    R+N++P +NR  ND++   K   QR  +D
Sbjct: 462 TSSESRTNTIPSRNRAGNDDSRRCKSRRQREFID 361


>TC81440 weakly similar to GP|9758571|dbj|BAB09184.1
           N-hydroxycinnamoyl/benzoyltransferase-like protein
           {Arabidopsis thaliana}, partial (34%)
          Length = 799

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 13/29 (44%), Positives = 17/29 (57%)
 Frame = -3

Query: 153 LKYPLTTPRAQVVKASLPEVLTKEEYPTV 181
           L YPL TP+A  +  SLP +L   E P +
Sbjct: 470 LAYPLLTPKAFPIPNSLPYILNLGELPII 384


>TC79365 weakly similar to GP|15010698|gb|AAK74008.1 AT3g22600/F16J14_17
           {Arabidopsis thaliana}, partial (51%)
          Length = 783

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 28/108 (25%), Positives = 49/108 (44%), Gaps = 3/108 (2%)
 Frame = +3

Query: 89  LGYKSPSLVNSSEMIMPKPATELIKEIAVLEMEVVYLEQHLLSLYRKAFDQQLSSVSPPT 148
           L   +PSL+    +++P   +  IK +  L + +V  + HLL   + A D+ L  V    
Sbjct: 246 LSVYAPSLM----VVVPLLESL*IKHLLSLSLLLVRFKLHLLVSAKVAMDRHLQQVQLLR 413

Query: 149 KEESLKYPLTTPRAQ---VVKASLPEVLTKEEYPTVQSNDHELEAMRK 193
           +   L   L  P+AQ   ++    P+V   ++    Q   H +EA+ K
Sbjct: 414 RALLLILQLNHPKAQ*HLLLTQIFPQVEQDQKVYHQQMVAHPMEALLK 557


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,635,423
Number of Sequences: 36976
Number of extensions: 282469
Number of successful extensions: 1722
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of query: 624
length of database: 9,014,727
effective HSP length: 102
effective length of query: 522
effective length of database: 5,243,175
effective search space: 2736937350
effective search space used: 2736937350
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)


Lotus: description of TM0323a.7